# terms

id: GO:0071683
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dendrite that is found on a sensory neuron, and directly transduces a sensory signal from the sensory neuron to another neuron.","definition_xrefs":["GOC:dos","GOC:mah","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sensory dendrite","termid":"GO:0071683"}


id: PBO:0057244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 449a","termid":"PBO:0057244"}


id: GO:0019151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactose + NAD+ = D-galactono-1,4-lactone + NADH + H+.","definition_xrefs":["EC:1.1.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"galactose 1-dehydrogenase activity","secondary_identifiers":["MetaCyc:GALACTODEHYDROG-RXN","RHEA:21296"],"synonyms":[{"name":"D-galactose 1-dehydrogenase activity","type":"exact"},{"name":"D-galactose dehydrogenase activity","type":"related"},{"name":"D-galactose:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"NAD-dependent D-galactose dehydrogenase activity","type":"related"},{"name":"beta-galactose dehydrogenase activity","type":"related"}],"termid":"GO:0019151"}


id: GO:1900551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of N',N'',N'''-triacetylfusarinine C.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"N',N'',N'''-triacetylfusarinine C metabolic process","termid":"GO:1900549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"N',N'',N'''-triacetylfusarinine C biosynthetic process","synonyms":[{"name":"N',N'',N'''-triacetylfusarinine C anabolism","type":"exact"},{"name":"N',N'',N'''-triacetylfusarinine C biosynthesis","type":"exact"},{"name":"N',N'',N'''-triacetylfusarinine C formation","type":"exact"},{"name":"N',N'',N'''-triacetylfusarinine C synthesis","type":"exact"}],"termid":"GO:1900551"}


id: PBO:0004867
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.16.6","termid":"PBO:0004867"}


id: PBO:0068232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal 3","termid":"PBO:0068232"}


id: MONDO:0017716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of fatty acid and ketone body metabolism","termid":"MONDO:0019223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of carnitine cycle and carnitine transport","secondary_identifiers":["UMLS:C5681080","GARD:21320","Orphanet:309130","icd11.foundation:890605309","NANDO:1200969","MEDGEN:1842227"],"termid":"MONDO:0017716","xrefs":{"Monarch":{"xref_id":"0017716"}}}


id: MONDO:0019616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete germinoma of the central nervous system (obsolete MONDO:0019616)","termid":"MONDO:0019616","xrefs":{"Monarch":{"xref_id":"0019616"}}}


id: GO:0032816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer cell activation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of natural killer cell activation","termid":"GO:0032814"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte activation","termid":"GO:0051251"},{"relation_name":"positively_regulates","term_name":"natural killer cell activation","termid":"GO:0030101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell activation","synonyms":[{"name":"activation of natural killer cell activation","type":"narrow"},{"name":"positive regulation of NK cell activation","type":"exact"},{"name":"stimulation of natural killer cell activation","type":"narrow"},{"name":"up regulation of natural killer cell activation","type":"exact"},{"name":"up-regulation of natural killer cell activation","type":"exact"},{"name":"upregulation of natural killer cell activation","type":"exact"}],"termid":"GO:0032816"}


id: PBO:0052872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 6-1","termid":"PBO:0052872"}


id: PBO:0063050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein associated with LIN7 1, MAGUK p55 family member","termid":"PBO:0063050"}


id: PBO:0061523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSFL1 cofactor","termid":"PBO:0061523"}


id: FYPO:0006277
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the structure of an N-linked glycan moiety of a nascent or mature glycoprotein differs from wild type.","definition_xrefs":["PMID:22988247","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glycoprotein glycan structure","termid":"FYPO:0003290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0002494"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0003290"},{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0003290","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal N-linked glycoprotein glycan structure","synonyms":[{"name":"abnormal N-linked glycoprotein oligosaccharide structure","type":"related"}],"termid":"FYPO:0006277"}


id: GO:1905100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptosome assembly.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:26265044","GOC:BHF_miRNA","GO_REF:0000058","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"apoptosome assembly","termid":"GO:0097314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of apoptosome assembly","synonyms":[{"name":"regulation of apoptosome formation","type":"exact"}],"termid":"GO:1905100"}


id: GO:0030909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The post-translational removal of peptide sequences from within a protein sequence, by a process not involving inteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein splicing","termid":"GO:0030908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"non-intein-mediated protein splicing","termid":"GO:0030909"}


id: GO:1900299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hexasaccharide transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of hexasaccharide transport","termid":"GO:1900297"},{"relation_name":"positively_regulates","term_name":"hexasaccharide transport","termid":"GO:2001102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of hexasaccharide transport","synonyms":[{"name":"activation of hexasaccharide transport","type":"narrow"},{"name":"up regulation of hexasaccharide transport","type":"exact"},{"name":"up-regulation of hexasaccharide transport","type":"exact"},{"name":"upregulation of hexasaccharide transport","type":"exact"}],"termid":"GO:1900299"}


id: PBO:0038512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily D member 3","termid":"PBO:0038512"}


id: GO:0038069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a phosphorylated MAP kinase + H2O = a MAP kinase + phosphate, where the MAP kinase (MAPK) is part of a MAPK signaling cascade that contributes to cell wall biogenesis.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase phosphatase activity involved in regulation of cell wall biogenesis (obsolete GO:0038069)","synonyms":[{"name":"Mpk1 phosphatase activity","type":"narrow"},{"name":"Slt2 phosphatase activity","type":"narrow"}],"termid":"GO:0038069"}


id: PBO:0116664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 4D","termid":"PBO:0116664"}


id: FYPO:0001653
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of lysine into the cell is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"},{"relation_name":"is_a","term_name":"abnormal lysine import","termid":"FYPO:0001651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abnormal lysine import during vegetative growth","synonyms":[{"name":"abnormal L-lysine import across plasma membrane during vegetative growth","type":"exact"},{"name":"abnormal L-lysine import during vegetative growth","type":"exact"},{"name":"abnormal lysine import during mitotic cell cycle","type":"related"},{"name":"abnormal lysine import into cell during vegetative growth","type":"exact"},{"name":"abnormal lysine uptake during vegetative growth","type":"exact"}],"termid":"FYPO:0001653"}


id: MONDO:0006764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Meningitis caused by fungal agents which may occur as opportunistic infections or arise in immunocompetent hosts.","definition_xrefs":["MESH:D016921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"},{"relation_name":"is_a","term_name":"infectious meningitis","termid":"MONDO:0004796"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal meningitis","secondary_identifiers":["DOID:11608","ICD9:321.1","EFO:1000942","icd11.foundation:1137081791","MedDRA:10017538","SCTID:24321005","MEDGEN:39285","UMLS:C0085438","ICD9:117.9"],"synonyms":[{"name":"Fungi caused infectious meningitis","type":"exact"},{"name":"Fungi infectious meningitis","type":"exact"}],"termid":"MONDO:0006764","xrefs":{"Monarch":{"xref_id":"0006764"}}}


id: GO:0046398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-glucuronate, a substance composed of glucuronic acid in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"UDP-glucuronate metabolic process","synonyms":[{"name":"UDP-glucuronate metabolism","type":"exact"}],"termid":"GO:0046398"}


id: MONDO:0013051
data:
  {"annotated_genes":["SJAG_00120"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86987],"is_not":false,"summary":null,"term":"MONDO:0013051"}]},"cv_name":"mondo","definition":"Autosomal recessive cutis laxa type 2B is a rare, hereditary, developmental defect with connective tissue involvement characterized by cutis laxa of variable severity, in utero growth restriction, congenital hip dislocation and joint hyperlaxity, wrinkling of the skin, in particular the dorsum of hands and feet, and progeroid facial features. Hypotonia, developmental delay, and intellectual disability are common. In addition, cataracts, corneal clouding, wormian bones, lipodystrophy and osteopenia have been reported.","definition_xrefs":["Orphanet:357064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cutis laxa type 2","termid":"MONDO:0019573"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00120":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive cutis laxa type 2B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:612940","MEDGEN:414526","MESH:C567855","UMLS:C2751987","GARD:1641","DOID:0070137"],"synonyms":[{"name":"ARCL2, progeroid type","type":"exact"},{"name":"ARCL2B","type":"exact"},{"name":"PYCR1 autosomal recessive cutis laxa type 2","type":"exact"},{"name":"autosomal recessive cutis laxa type 2 caused by mutation in PYCR1","type":"exact"},{"name":"autosomal recessive cutis laxa type 2, progeroid type","type":"exact"},{"name":"autosomal recessive cutis laxa type 2B","type":"exact"},{"name":"autosomal recessive cutis laxa type IIB","type":"related"},{"name":"cutis laxa with progeroid features","type":"related"},{"name":"cutis laxa, autosomal recessive type 2B","type":"related"},{"name":"cutis laxa, autosomal recessive, type 2B","type":"related"},{"name":"cutis laxa, autosomal recessive, type IIB","type":"related"}],"termid":"MONDO:0013051","terms_by_termid":{"MONDO:0013051":null},"xrefs":{"Monarch":{"xref_id":"0013051"}}}


id: MONDO:0018356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"secondary neonatal autoimmune disease","secondary_identifiers":["GARD:21643","Orphanet:398091","MEDGEN:1842254","UMLS:C5680041"],"synonyms":[{"name":"Transplacentally acquired neonatal autoimmune disease","type":"exact"}],"termid":"MONDO:0018356","xrefs":{"Monarch":{"xref_id":"0018356"}}}


id: MOD:01258
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:9448752","Unimod:314#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylmaleimide derivatized residue","termid":"MOD:00625"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"N-methylmaleimide - site C","synonyms":[{"name":"Nmethylmaleimide","type":"related"}],"termid":"MOD:01258"}


id: PBO:0109977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invertase, beta-fructofuranosidase Inv2","termid":"PBO:0109977"}


id: GO:0060924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to atrial cardiac muscle cell fates and their capacity to differentiate into cardiac muscle cells of the atrium. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell fate commitment","termid":"GO:0060923"},{"relation_name":"part_of","term_name":"atrial cardiac muscle cell differentiation","termid":"GO:0055011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle cell fate commitment","synonyms":[{"name":"atrial cardiomyocyte cell fate commitment","type":"related"},{"name":"atrial heart muscle cell fate commitment","type":"exact"}],"termid":"GO:0060924"}


id: PBO:0030438
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_tRNA-Asp_C48,_C49,_C60,_C61_and_C62_methylation","termid":"PBO:0030438"}


id: GO:0010217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A homeostatic process involved in the maintenance of a steady state level of aluminium ions within a cell.","definition_xrefs":["GOC:mah","GOC:lr"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular aluminum ion homeostasis (obsolete GO:0010217)","synonyms":[{"name":"cellular aluminium ion homeostasis","type":"exact"},{"name":"cellular aluminum ion homeostasis","type":"exact"}],"termid":"GO:0010217"}


id: MONDO:0019473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon mature T-cell lymphoma of intraepithelial lymphocytes. It usually arises from the small intestine, most commonly the jejunum or ileum. Other less frequent primary anatomic sites include the duodenum, stomach, colon, or outside the gastrointestinal tract. It is seen with increased frequency in regions with a high prevalence of celiac disease.","definition_xrefs":["NCIT:C4737"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare tumor of small intestine (obsolete MONDO:0018505)","termid":"MONDO:0018505"},{"relation_name":"is_a","term_name":"T-cell non-Hodgkin lymphoma","termid":"MONDO:0015760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"enteropathy-associated T-cell lymphoma","secondary_identifiers":["MESH:D058527","ICD9:202.70","SCTID:277654008","Orphanet:86880","icd11.foundation:958629729","ICDO:9717/3","GARD:9809","MedDRA:10022703","ONCOTREE:EATL","UMLS:C0456889","MEDGEN:96832"],"synonyms":[{"name":"EATCL","type":"related"},{"name":"EATL","type":"exact"},{"name":"EATL, type I","type":"exact"},{"name":"ETTL","type":"exact"},{"name":"enteropathy associated T-cell lymphoma","type":"exact"},{"name":"enteropathy-associated T-cell lymphoma, type I","type":"exact"},{"name":"enteropathy-type T-cell lymphoma","type":"exact"},{"name":"high-grade pleomorphic peripheral T-cell lymphoma","type":"related"},{"name":"intestinal T-cell lymphoma","type":"exact"}],"termid":"MONDO:0019473","xrefs":{"Monarch":{"xref_id":"0019473"}}}


id: PBO:0058588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6721","termid":"PBO:0058588"}


id: PBO:0116638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF guanine nucleotide exchange factor 1","termid":"PBO:0116638"}


id: GO:1900733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of polyketide biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of polyketide biosynthetic process","termid":"GO:1900732"},{"relation_name":"negatively_regulates","term_name":"polyketide biosynthetic process","termid":"GO:0030639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"negative regulation of polyketide biosynthetic process","synonyms":[{"name":"down regulation of polyketide anabolism","type":"exact"},{"name":"down regulation of polyketide biosynthesis","type":"exact"},{"name":"down regulation of polyketide biosynthetic process","type":"exact"},{"name":"down regulation of polyketide formation","type":"exact"},{"name":"down regulation of polyketide synthesis","type":"exact"},{"name":"down-regulation of polyketide anabolism","type":"exact"},{"name":"down-regulation of polyketide biosynthesis","type":"exact"},{"name":"down-regulation of polyketide biosynthetic process","type":"exact"},{"name":"down-regulation of polyketide formation","type":"exact"},{"name":"down-regulation of polyketide synthesis","type":"exact"},{"name":"downregulation of polyketide anabolism","type":"exact"},{"name":"downregulation of polyketide biosynthesis","type":"exact"},{"name":"downregulation of polyketide biosynthetic process","type":"exact"},{"name":"downregulation of polyketide formation","type":"exact"},{"name":"downregulation of polyketide synthesis","type":"exact"},{"name":"inhibition of polyketide anabolism","type":"exact"},{"name":"inhibition of polyketide biosynthesis","type":"exact"},{"name":"inhibition of polyketide biosynthetic process","type":"narrow"},{"name":"inhibition of polyketide formation","type":"exact"},{"name":"inhibition of polyketide synthesis","type":"exact"},{"name":"negative regulation of polyketide anabolism","type":"exact"},{"name":"negative regulation of polyketide biosynthesis","type":"exact"},{"name":"negative regulation of polyketide formation","type":"exact"},{"name":"negative regulation of polyketide synthesis","type":"exact"}],"termid":"GO:1900733"}


id: MONDO:0019708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","synonyms":[{"name":"primary osteodysplasia with disorganized development of skeletal components","type":"related"},{"name":"primary skeletal dysplasia with disorganized development of skeletal components","type":"related"}],"termid":"MONDO:0019708","xrefs":{"Monarch":{"xref_id":"0019708"}}}


id: GO:1990865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an episodic stimulus indicating lowered oxygen tension.","definition_xrefs":["PMID:24055447"],"gene_count":0,"genotype_count":0,"name":"obsolete response to intermittent hypoxia (obsolete GO:1990865)","termid":"GO:1990865"}


id: GO:0034408
data:
  {"annotated_genes":["SJAG_04483","SJAG_04666","SJAG_04771","SJAG_03587"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[74759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[89369,94302],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of ascospores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal-type cell wall beta-glucan metabolic process","termid":"GO:0070879"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"ascospore wall biogenesis","termid":"GO:0070591"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03587":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044085","GO:0071554","GO:0008150","GO:0007049","GO:0030437"],"is_obsolete":false,"name":"ascospore wall beta-glucan metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ascospore wall beta-glucan metabolism","type":"exact"}],"termid":"GO:0034408","terms_by_termid":{"GO:0034412":null,"GO:0034413":null,"GO:0140748":null}}


id: MONDO:0018485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glycogen storage disease due to acid maltase deficiency, late onset (AMDL), a form of Glycogen storage disease due to acid maltase deficiency (AMD), a degenerative metabolic myopathy particularly affecting respiratory and skeletal muscles, is characterized by an accumulation of glycogen in lysosomes.","definition_xrefs":["Orphanet:420429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease II","termid":"MONDO:0009290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561","MONDO:0037792","MONDO:0005267"],"is_obsolete":false,"name":"glycogen storage disease due to acid maltase deficiency, late-onset","secondary_identifiers":["MEDGEN:575206","GARD:21746","UMLS:C0342753","SCTID:722343009"],"synonyms":[{"name":"Alpha-1,4-glucosidase acid deficiency, late onset","type":"exact"},{"name":"Alpha-1,4-glucosidase acid deficiency, late-onset","type":"exact"},{"name":"GSD due to acid maltase deficiency, late onset","type":"exact"},{"name":"GSD due to acid maltase deficiency, late-onset","type":"exact"},{"name":"GSD type 2, late onset","type":"exact"},{"name":"GSD type 2, late-onset","type":"exact"},{"name":"GSD type II, late onset","type":"exact"},{"name":"GSD type II, late-onset","type":"exact"},{"name":"LOPD","type":"exact"},{"name":"Pompe disease, late onset","type":"exact"},{"name":"Pompe disease, late-onset","type":"exact"},{"name":"glycogen storage disease type 2, late onset","type":"exact"},{"name":"glycogen storage disease type 2, late-onset","type":"exact"},{"name":"glycogen storage disease type II, late onset","type":"exact"},{"name":"glycogen storage disease type II, late-onset","type":"exact"},{"name":"glycogenosis type 2, late onset","type":"exact"},{"name":"glycogenosis type 2, late-onset","type":"exact"},{"name":"glycogenosis type II, late onset","type":"exact"},{"name":"glycogenosis type II, late-onset","type":"exact"}],"termid":"MONDO:0018485","xrefs":{"Monarch":{"xref_id":"0018485"}}}


id: PBO:0043571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type VIII alpha 1 chain","termid":"PBO:0043571"}


id: MONDO:0958351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare form of composite dysraphism characterized by the presence of a split cord malformation and a myeloschisis on one of the two hemicords. Hemicords can be in a single dural sac or in two separated dural sacs. Other spinal cord malformations can be associated. Due to the comparable prognosis it is considered as a subtype of myeloschisis.","definition_xrefs":["Orphanet:645393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloschisis","termid":"MONDO:0958076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"hemi-myeloschisis","secondary_identifiers":["MEDGEN:1853138","UMLS:C5816709"],"termid":"MONDO:0958351","xrefs":{"Monarch":{"xref_id":"0958351"}}}


id: GO:0032018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methylbutan-1-ol + NADP+ = 2-methylbutanal + NADPH + H+.","definition_xrefs":["PMID:12210903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NADP+) activity","termid":"GO:0008106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-methylbutanal reductase (NADPH) activity","synonyms":[{"name":"2-methylbutanal reductase (NADP) activity","type":"exact"},{"name":"2-methylbutanol:NADP oxidoreductase activity","type":"exact"},{"name":"2-methylbutyraldehyde reductase (NADP) activity","type":"exact"}],"termid":"GO:0032018"}


id: MONDO:0002067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"female breast carcinoma","termid":"MONDO:0004379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"female breast upper-inner quadrant cancer","secondary_identifiers":["ICD10CM:C50.2","UMLS:C0153550","ICD9:174.2","MEDGEN:509324","DOID:1647","SCTID:188152004"],"synonyms":[{"name":"malignant neoplasm of upper-inner quadrant of female breast","type":"exact"}],"termid":"MONDO:0002067","xrefs":{"Monarch":{"xref_id":"0002067"}}}


id: MONDO:0003258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma characterized by the presence of hobnail endothelial cells.","definition_xrefs":["NCIT:C27506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hobnail hemangioma","secondary_identifiers":["DOID:505","Orphanet:675362","MEDGEN:91080","SCTID:254790003","UMLS:C0346076"],"synonyms":[{"name":"Targetoid Hemosiderotic hemangioma","type":"exact"},{"name":"hobnail hemangioma","type":"exact"}],"termid":"MONDO:0003258","xrefs":{"Monarch":{"xref_id":"0003258"}}}


id: FYPO:0005024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation is abnormal along the chromosome arms. Mitotic sister chromatid separation is the process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["PomBase:mah","PMID:21633354","GO:1990891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid separation","termid":"FYPO:0000670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000337","FYPO:0000641","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic sister chromatid arm separation","synonyms":[{"name":"abnormal mitotic chromosome arm separation","type":"exact"},{"name":"abnormal sister chromatid arm separation during mitosis","type":"exact"},{"name":"abnormal sister chromatid arm separation during mitotic cell cycle","type":"related"},{"name":"abnormal sister chromatid arm separation during vegetative growth","type":"exact"}],"termid":"FYPO:0005024"}


id: GO:0004673
data:
  {"annotated_genes":["SJAG_01587","SJAG_00331","SJAG_02183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58139,79654,66830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000155"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + protein L-histidine = ADP + protein phospho-L-histidine.","definition_xrefs":["EC:2.7.13.3","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"},{"relation_name":"is_a","term_name":"phosphotransferase activity, nitrogenous group as acceptor","termid":"GO:0016775"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00331":null,"SJAG_01587":null,"SJAG_02183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016740","GO:0016301","GO:0003824","GO:0004672"],"is_obsolete":false,"name":"protein histidine kinase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["GO:0008896","MetaCyc:2.7.13.3-RXN"],"synonyms":[{"name":"ATP:protein-L-histidine N-phosphotransferase activity","type":"related"},{"name":"histidine kinase activity","type":"exact"},{"name":"histidine protein kinase activity","type":"related"},{"name":"protein kinase (histidine)","type":"related"},{"name":"protein-histidine kinase activity","type":"exact"}],"termid":"GO:0004673","terms_by_termid":{"GO:0000155":null}}


id: MONDO:0019258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mild phenylketonuria is a rare form of phenylketouria (PKU), an inborn error of amino acid metabolism, characterized by symptoms of PKU of mild to moderate severity.","definition_xrefs":["Orphanet:79253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylketonuria","termid":"MONDO:0009861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"mild phenylketonuria","secondary_identifiers":["GARD:10324","MEDGEN:1842357","UMLS:C5680203"],"synonyms":[{"name":"mPKU","type":"exact"},{"name":"mild PKU","type":"exact"},{"name":"variant PKU","type":"exact"},{"name":"variant phenylketonuria","type":"exact"}],"termid":"MONDO:0019258","xrefs":{"Monarch":{"xref_id":"0019258"}}}


id: GO:0090677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phenotypic switching process where a cell reversibly differentiates and dedifferentiates from one cell type into another.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenotypic switching","termid":"GO:0036166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reversible differentiation","termid":"GO:0090677"}


id: MONDO:0002539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete oligodendroglioma (obsolete MONDO:0002539)","termid":"MONDO:0002539","xrefs":{"Monarch":{"xref_id":"0002539"}}}


id: GO:1904456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neuronal action potential.","definition_xrefs":["PMID:25126967","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of action potential","termid":"GO:0045759"},{"relation_name":"is_a","term_name":"negative regulation of transmission of nerve impulse","termid":"GO:0051970"},{"relation_name":"is_a","term_name":"regulation of neuronal action potential","termid":"GO:0098908"},{"relation_name":"negatively_regulates","term_name":"neuronal action potential","termid":"GO:0019228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuronal action potential","synonyms":[{"name":"down regulation of generation of action potential","type":"related"},{"name":"down regulation of neuronal action potential","type":"exact"},{"name":"down-regulation of generation of action potential","type":"related"},{"name":"down-regulation of neuronal action potential","type":"exact"},{"name":"downregulation of generation of action potential","type":"related"},{"name":"downregulation of neuronal action potential","type":"exact"},{"name":"inhibition of generation of action potential","type":"related"},{"name":"inhibition of neuronal action potential","type":"narrow"},{"name":"negative regulation of generation of action potential","type":"related"}],"termid":"GO:1904456"}


id: GO:0098595
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space between the membrane of an oocyte and a surrounding membranous structure (zona pellucida or perivitelline membrane).","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"perivitelline space","termid":"GO:0098595"}


id: GO:0035983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a trichostatin A stimulus.","definition_xrefs":["GOC:yaf","PMID:20181743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to antibiotic","termid":"GO:0046677"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to trichostatin A","termid":"GO:0035983"}


id: GO:0150037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium-dependent activation of synaptic vesicle fusion.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:27052163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic vesicle fusion to presynaptic active zone membrane","termid":"GO:0031630"},{"relation_name":"regulates","term_name":"calcium-dependent activation of synaptic vesicle fusion","termid":"GO:0099502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0061024","GO:0016192"],"is_obsolete":false,"name":"regulation of calcium-dependent activation of synaptic vesicle fusion","termid":"GO:0150037"}


id: MONDO:0009927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any 3MC syndrome in which the cause of the disease is a mutation in the COLEC11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3MC syndrome","termid":"MONDO:0017398"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3MC syndrome 2","secondary_identifiers":["Orphanet:2998","OMIM:265050","UMLS:C0796279","MESH:C535586","DOID:0060576","EFO:1001977","GARD:18428","MEDGEN:167115"],"synonyms":[{"name":"3MC syndrome 2","type":"exact"},{"name":"3MC syndrome caused by mutation in COLEC11","type":"exact"},{"name":"3MC syndrome type 2","type":"exact"},{"name":"3MC2","type":"related"},{"name":"3Mc syndrome type 2","type":"exact"},{"name":"COLEC11 3MC syndrome","type":"exact"},{"name":"Carnevale syndrome","type":"related"},{"name":"Carnevale syndrome, formerly","type":"related"},{"name":"Osa syndrome","type":"related"},{"name":"oculo-skeletal-abdominal syndrome","type":"related"},{"name":"ptosis of eyelids with diastasis recti and hip dysplasia","type":"related"}],"termid":"MONDO:0009927","xrefs":{"Monarch":{"xref_id":"0009927"}}}


id: PBO:0080664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 10A","termid":"PBO:0080664"}


id: PBO:0028512
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation","termid":"PBO:0028512"}


id: GO:0048037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete cofactor binding (obsolete GO:0048037)","termid":"GO:0048037"}


id: MONDO:1012557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitral valve dysplasia, non-human animal","termid":"MONDO:1011652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitral valve dysplasia, horse","secondary_identifiers":["OMIA:002521-9796"],"termid":"MONDO:1012557","xrefs":{"Monarch":{"xref_id":"1012557"}}}


id: GO:0031728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR3 chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"CCR3 chemokine receptor binding","synonyms":[{"name":"CCR3 chemokine receptor ligand","type":"narrow"},{"name":"eosinophil eotaxin receptor binding","type":"exact"}],"termid":"GO:0031728"}


id: SO:0000421
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inverted repeat (SO:0000294) occurring at the 3-prime termini of a DNA transposon.","direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat","termid":"SO:0000481"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_terminal_inverted_repeat","synonyms":[{"name":"3' TIR","type":"exact"},{"name":"three prime terminal inverted repeat","type":"exact"}],"termid":"SO:0000421"}


id: MONDO:0000434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete peripheral T-cell lymphoma (obsolete MONDO:0000434)","termid":"MONDO:0000434","xrefs":{"Monarch":{"xref_id":"0000434"}}}


id: GO:0015576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of sorbitol from one side of a membrane to the other. Sorbitol, also known as glucitol, is the hexitol derived by the reduction of the aldehyde group of glucose.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"polyol transmembrane transporter activity","termid":"GO:0015166"},{"relation_name":"is_a","term_name":"active transmembrane transporter activity","termid":"GO:0022804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"sorbitol transmembrane transporter activity","secondary_identifiers":["GO:0015587"],"synonyms":[{"name":"glucitol permease activity","type":"exact"},{"name":"glucitol transporter activity","type":"exact"},{"name":"sorbitol permease activity","type":"exact"}],"termid":"GO:0015576"}


id: GO:0004772
data:
  {"annotated_genes":["SJAG_04049","SJAG_04059"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78079,82083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034737"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain fatty acyl-CoA + a sterol = a sterol ester + CoA.","definition_xrefs":["RHEA:59816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04049":null,"SJAG_04059":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"sterol O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:2.3.1.26","MetaCyc:RXN-20233","GO:0017066"],"synonyms":[{"name":"sterol-ester synthase activity","type":"related"},{"name":"sterol-ester synthetase activity","type":"related"}],"termid":"GO:0004772","terms_by_termid":{"GO:0034737":null}}


id: PR:000050528
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the hhf3 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4, hhf3 gene translation product (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1105.12","termid":"PR:000050528"}


id: GO:0042151
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle found in cnidoblast (nematoblast) cells. When matured, these stinging organelles store toxins and can deliver them when the cnidocil (a short extension of the cnidocyst) is stimulated by a prey or another stimulus.","definition_xrefs":["GOC:jl","DOI:10.1139/z02-135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"cell cortex","termid":"GO:0005938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005938"],"is_obsolete":false,"name":"nematocyst","secondary_identifiers":["Wikipedia:Cnidocyte"],"synonyms":[{"name":"cnidocyst","type":"exact"}],"termid":"GO:0042151"}


id: MONDO:0014237
data:
  {"annotated_genes":["SJAG_01538","SJAG_04558"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87633,87634],"is_not":false,"summary":null,"term":"MONDO:0014237"}]},"cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the SYNE4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01538":null,"SJAG_04558":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 76","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3147083","GARD:22650","DOID:0110524","MEDGEN:811137","OMIM:615540"],"synonyms":[{"name":"DFNB76","type":"narrow"},{"name":"SYNE4 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 76","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 76","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in SYNE4","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 76","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 76","type":"exact"},{"name":"deafness, autosomal recessive 76","type":"narrow"},{"name":"deafness, autosomal recessive type 76","type":"narrow"}],"termid":"MONDO:0014237","terms_by_termid":{"MONDO:0014237":null},"xrefs":{"Monarch":{"xref_id":"0014237"}}}


id: FYPO:0004892
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing an echinocandin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0000257","FYPO:0002058","FYPO:0000139","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on echinocandin","synonyms":[{"name":"normal cell population growth in presence of echinocandin","type":"exact"},{"name":"normal cell population growth on echinocandin","type":"exact"},{"name":"normal cellular response to echinocandin","type":"related"},{"name":"normal vegetative cell population growth on echinocandin","type":"exact"}],"termid":"FYPO:0004892"}


id: PATO:0000706
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A threshold which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"threshold","termid":"PATO:0000152"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased threshold","secondary_identifiers":["PATO:0000709"],"synonyms":[{"name":"high threshold","type":"exact"}],"termid":"PATO:0000706"}


id: GO:0032701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-18 production.","definition_xrefs":["PMID:23710316","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-18 production","termid":"GO:0032661"},{"relation_name":"negatively_regulates","term_name":"interleukin-18 production","termid":"GO:0032621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-18 production","secondary_identifiers":["GO:0045382","GO:0150121"],"synonyms":[{"name":"down regulation of interleukin-18 production","type":"exact"},{"name":"down-regulation of interleukin-18 production","type":"exact"},{"name":"downregulation of interleukin-18 production","type":"exact"},{"name":"inhibition of interleukin-18 production","type":"narrow"},{"name":"negative regulation of IL-18 production","type":"exact"},{"name":"negative regulation of interleukin-18 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-18 secretion","type":"narrow"}],"termid":"GO:0032701"}


id: PR:Q9Y812
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3-like centromeric protein cnp1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DAN","UniProtKB:Q9Y812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"histone H3-like centromeric protein cnp1 (Schizosaccharomyces pombe)","termid":"PR:000041369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-like centromeric protein cnp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.17","synonyms":[{"name":"CENP-A homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cnp1","type":"exact"},{"name":"centromere protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"silencing in the middle of the centromere protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y812"}


id: PBO:0000539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase","termid":"PBO:0000539"}


id: FYPO:0007100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the first meiotic nuclear division is arrested in prophase I under conditions where arrest does not normally occur, and with telomeres clustered at the spindle pole body. Telomere clustering at the SPB indicates that the cell has reached or passed the pachytene stage.","definition_xrefs":["PomBase:mah","PMID:21449049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested meiosis I","termid":"FYPO:0002817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell cycle arrest in meiotic prophase I with clustered telomeres","synonyms":[{"name":"abnormal cell cycle arrest in meiotic prophase I at or after pachytene","type":"exact"},{"name":"abnormal cell cycle arrest in meiotic prophase I with telomeres clustered at SPB","type":"exact"},{"name":"abnormal cell cycle arrest in meiotic prophase I with telomeres clustered at spindle pole bodies","type":"exact"}],"termid":"FYPO:0007100"}


id: GO:0061197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the fungiform papilla are generated and organized. The fungiform papilla is a mushroom-shaped papilla of the tongue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"tongue morphogenesis","termid":"GO:0043587"},{"relation_name":"part_of","term_name":"fungiform papilla development","termid":"GO:0061196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fungiform papilla morphogenesis","termid":"GO:0061197"}


id: MONDO:0013963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the CABP2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 93","secondary_identifiers":["OMIM:614899","UMLS:C3888355","MEDGEN:854875","DOID:0110537","GARD:22645"],"synonyms":[{"name":"CABP2 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"DFNB93","type":"narrow"},{"name":"autosomal recessive deafness 93","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 93","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in CABP2","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 93","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 93","type":"exact"},{"name":"deafness, autosomal recessive 93","type":"narrow"},{"name":"deafness, autosomal recessive type 93","type":"narrow"}],"termid":"MONDO:0013963","xrefs":{"Monarch":{"xref_id":"0013963"}}}


id: MONDO:0032897
data:
  {"annotated_genes":["SJAG_00342"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88518],"is_not":false,"summary":null,"term":"MONDO:0032897"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00342":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with hypotonia and behavioral abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5231489","MEDGEN:1684709","OMIM:618748"],"synonyms":[{"name":"IDDHBA","type":"related"},{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER WITH HYPOTONIA AND BEHAVIORAL ABNORMALITIES","type":"related"}],"termid":"MONDO:0032897","terms_by_termid":{"MONDO:0032897":null},"xrefs":{"Monarch":{"xref_id":"0032897"}}}


id: GO:1905590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a fibronectin fibril.","definition_xrefs":["GOC:TermGenie","PMID:20690820","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibronectin fibril organization","termid":"GO:1905590"}


id: PBO:0060818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal EF-hand calcium binding protein 3","termid":"PBO:0060818"}


id: PR:O74345
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ucp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain-containing protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21D10.05c","synonyms":[{"name":"Spom972h-ucp3","type":"exact"}],"termid":"PR:O74345"}


id: GO:0060048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Muscle contraction of cardiac muscle tissue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle contraction","termid":"GO:0006941"},{"relation_name":"part_of","term_name":"heart contraction","termid":"GO:0060047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle contraction","synonyms":[{"name":"heart muscle contraction","type":"exact"}],"termid":"GO:0060048"}


id: GO:0002407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a dendritic cell in response to an external stimulus.","definition_xrefs":["CL:0000451","PMID:16056255","GOC:add","ISBN:0781735149","PMID:15814331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte chemotaxis","termid":"GO:0030595"},{"relation_name":"is_a","term_name":"dendritic cell migration","termid":"GO:0036336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell chemotaxis","termid":"GO:0002407"}


id: PBO:0069554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 826, pseudogene","termid":"PBO:0069554"}


id: MONDO:0015959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inherited syndrome with bone tumors as a major feature (obsolete MONDO:0015959)","secondary_identifiers":["Orphanet:183527"],"synonyms":[{"name":"genetic bone tumor","type":"related"}],"termid":"MONDO:0015959","xrefs":{"Monarch":{"xref_id":"0015959"}}}


id: MONDO:0018448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Clear cell papillary renal cell carcinoma is a rare, indolent subtype of clear cell renal carcinoma, arising from epithelial cells in the renal cortex. It most frequently manifests with a well-circumscribed, well-encapsulated, unicentric, unilateral, small tumor that typically does not metastasize. Clinically it can present with flank or abdominal pain or hematuria, although most patients are usually asymptomatic at the time of diagnosis. Bilateral and/or multifocal presentation should raise the suspicion of von Hippel-Lindau syndrome.","definition_xrefs":["Orphanet:404511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonpapillary renal cell carcinoma","termid":"MONDO:0007763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"clear cell papillary renal cell carcinoma","secondary_identifiers":["SCTID:734015000","UMLS:C4518333","MEDGEN:1388623","NCIT:C121955","ONCOTREE:CCPRC","GARD:21721"],"termid":"MONDO:0018448","xrefs":{"Monarch":{"xref_id":"0018448"}}}


id: FYPO:0003478
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121181,121221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects signal transduction. Signal transduction is the process in which a signal is conveyed to trigger a change in the activity or state of a cell. It begins with reception of a signal and ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. A phenotype may affect one or more steps in one or more signal transduction pathways.","definition_xrefs":["PomBase:mah","GO:0007165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"cellular response phenotype","termid":"FYPO:0000298"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01330":null},"genotype_count":1,"genotypes_by_uniquename":{"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"signal transduction phenotype","references_by_uniquename":{"PMID:21802294":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01330"],"single_locus_genotype_uniquenames":["mad2delta"],"synonyms":[{"name":"fission yeast signal transduction phenotype","type":"exact"}],"termid":"FYPO:0003478","terms_by_termid":{"FYECO:0000162":null,"FYPO:0004318":null}}


id: PBO:0070410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication protein A3","termid":"PBO:0070410"}


id: GO:0160038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a somatic sensory system over time from its formation to the mature structure. Somatic sensory system is the sensory system for the sense of touch and pain.","definition_xrefs":["PMID:25832476","PMID:31399790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory system development","termid":"GO:0048880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic sensory system development","synonyms":[{"name":"somatosensory system development","type":"exact"}],"termid":"GO:0160038"}


id: GO:0044647
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An occluding cell-cell junction formed between the membranes of the apical end of an invading cell (e.g. a merozoite in Plasmodium) and a host target cell (e.g. erythrocyte for Plasmodium infection). The junction is a stable yet dynamic structure that moves around the symbiont cell during invasion, enclosing it in a vacuole surrounded by a membrane.","definition_xrefs":["PMID:21803641","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bicellular tight junction","termid":"GO:0005923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host-symbiont bicellular tight junction","synonyms":[{"name":"host-parasite tight junction","type":"exact"},{"name":"host-pathogen tight junction","type":"exact"}],"termid":"GO:0044647"}


id: GO:0002139
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure involved in coupling stereocilia to one another in sensory hair cells There are four morphologically distinct types: tip links, horizontal top connectors, shaft connectors and ankle links. Tip links and horizontal top connectors are the only inter-stereocilia links associated with mature cochlea, whereas ankle links appear during development of the auditory hair bundle.","definition_xrefs":["PMID:16775142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"stereocilium bundle","termid":"GO:0032421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilia coupling link","termid":"GO:0002139"}


id: PATO:0000033
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a substance by virtue of the amount of the bearer's there is mixed with another substance.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/concentration"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concentration of","synonyms":[{"name":"concentration","type":"exact"}],"termid":"PATO:0000033"}


id: MONDO:0016364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Joubert syndrome with ocular defect is, along with pure JS, the most frequent subtype of Joubert syndrome and related disorders (JSRD) characterized by the neurological features of JS associated with retinal dystrophy.","definition_xrefs":["Orphanet:220493"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"Joubert syndrome and related disorders","termid":"MONDO:0015369"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559","MONDO:0020022"],"is_obsolete":false,"name":"Joubert syndrome with ocular defect","secondary_identifiers":["UMLS:C4274118","GARD:10168","icd11.foundation:1358617785","SCTID:716998009","ICD10CM:H35.5","MEDGEN:909607"],"synonyms":[{"name":"JBTS3","type":"related"},{"name":"JS-O","type":"exact"},{"name":"Joubert syndrome 3","type":"related"},{"name":"Joubert syndrome with ocular anomalies","type":"related"},{"name":"Joubert syndrome with retinopathy","type":"exact"}],"termid":"MONDO:0016364","xrefs":{"Monarch":{"xref_id":"0016364"}}}


id: PBHQ:004
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_has_qualifier_range","direct_ancestors":[{"relation_name":"is_a","term_name":"has_qualifier_range","termid":"PBHQ:001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contributes_to","termid":"PBHQ:004"}


id: GO:0060212
data:
  {"annotated_genes":["SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93555],"is_not":false,"summary":null,"term":"GO:0060212"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of poly(A) tail shortening of a nuclear-transcribed mRNA. Poly(A) tail shortening is the decrease in length of the poly(A) tail of an mRNA from full length to an oligo(A) length.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nuclear-transcribed mRNA poly(A) tail shortening","termid":"GO:0060211"},{"relation_name":"is_a","term_name":"negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","termid":"GO:1900152"},{"relation_name":"negatively_regulates","term_name":"nuclear-transcribed mRNA poly(A) tail shortening","termid":"GO:0000289"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"negative regulation of nuclear-transcribed mRNA poly(A) tail shortening","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of 3' to 5' mRNA deadenylation","type":"related"},{"name":"negative regulation of mRNA deadenylation","type":"related"},{"name":"negative regulation of nuclear mRNA poly(A) tail shortening","type":"related"}],"termid":"GO:0060212","terms_by_termid":{"GO:0060212":null}}


id: PBO:0078896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 7-1","termid":"PBO:0078896"}


id: MONDO:1012234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reduced glutathione deficiency due to GCS deficiency, non-human animal","termid":"MONDO:1011693"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reduced glutathione deficiency due to GCS deficiency, sheep","secondary_identifiers":["OMIA:000853-9940"],"termid":"MONDO:1012234","xrefs":{"Monarch":{"xref_id":"1012234"}}}


id: PBO:0086421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GTPase peripheral to the mitochondrial inner membrane; essential for respiratory competence, likely functions in assembly of the large ribosomal subunit, has homologs in plants and animals","termid":"PBO:0086421"}


id: FYPO:0005877
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize glutamate, and therefore requires glutamate in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for glutamate","synonyms":[{"name":"glutamate auxotrophy","type":"exact"},{"name":"growth auxotrophic for glutamate during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for glutamate during vegetative growth","type":"exact"},{"name":"growth auxotrophic for glutamic acid","type":"exact"}],"termid":"FYPO:0005877"}


id: PBO:0066989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 292","termid":"PBO:0066989"}


id: GO:0008812
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + choline = AH(2) + betaine aldehyde.","definition_xrefs":["RHEA:17433","EC:1.1.99.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"choline dehydrogenase activity","secondary_identifiers":["MetaCyc:CHD-RXN","KEGG_REACTION:R01025","Reactome:R-HSA-6797961"],"synonyms":[{"name":"choline oxidase activity","type":"broad"},{"name":"choline-cytochrome c reductase activity","type":"related"},{"name":"choline:(acceptor) 1-oxidoreductase activity","type":"related"},{"name":"choline:(acceptor) oxidoreductase activity","type":"related"},{"name":"choline:acceptor 1-oxidoreductase activity","type":"related"}],"termid":"GO:0008812"}


id: GO:1900281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CD4-positive, alpha-beta T cell costimulation.","definition_xrefs":["GOC:BHF","GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of CD4-positive, alpha-beta T cell costimulation","termid":"GO:1900279"},{"relation_name":"is_a","term_name":"positive regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000516"},{"relation_name":"is_a","term_name":"positive regulation of T cell costimulation","termid":"GO:2000525"},{"relation_name":"positively_regulates","term_name":"CD4-positive, alpha-beta T cell costimulation","termid":"GO:0035783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of CD4-positive, alpha-beta T cell costimulation","synonyms":[{"name":"activation of CD4-positive, alpha beta T cell costimulation","type":"narrow"},{"name":"positive regulation of CD4-positive, alpha beta T cell costimulation","type":"exact"},{"name":"up regulation of CD4-positive, alpha beta T cell costimulation","type":"exact"},{"name":"up-regulation of CD4-positive, alpha beta T cell costimulation","type":"exact"},{"name":"upregulation of CD4-positive, alpha beta T cell costimulation","type":"exact"}],"termid":"GO:1900281"}


id: GO:0048630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of a skeletal muscle. This may be due to a change in the fiber number or size.","definition_xrefs":["PMID:15726494","PMID:15907921","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle tissue growth","termid":"GO:0048630"}


id: PBO:0027330
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rRNA_transcription","termid":"PBO:0027330"}


id: FYPO:0000950
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell does not contain a septum and is elongated.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0000005","FYPO:0001320","FYPO:0005447","FYPO:0000032"],"is_obsolete":false,"name":"elongated aseptate vegetative cell","synonyms":[{"name":"elongated aseptate cell during mitotic cell cycle","type":"related"},{"name":"elongated aseptate cell during vegetative growth","type":"exact"}],"termid":"FYPO:0000950"}


id: PBO:0108890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 3","termid":"PBO:0108890"}


id: PBO:0040951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 22","termid":"PBO:0040951"}


id: PBO:0027709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_positive_regulation_of_DNA-directed_DNA_polymerase_activity","termid":"PBO:0027709"}


id: GO:0060058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process of mammary epithelial cells during mammary gland involution.","definition_xrefs":["GOC:mtg_apoptosis","GOC:dph","PMID:15282149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in morphogenesis","termid":"GO:1902339"},{"relation_name":"positively_regulates","term_name":"apoptotic process involved in mammary gland involution","termid":"GO:0060057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic process involved in mammary gland involution","synonyms":[{"name":"positive regulation of apoptosis involved in mammary gland involution","type":"narrow"}],"termid":"GO:0060058"}


id: PBO:0056843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B","termid":"PBO:0056843"}


id: GO:0070076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a histone by the removal of a methyl group from a lysine residue.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone lysine demethylation (obsolete GO:0070076)","termid":"GO:0070076"}


id: FYPO:0000164
data:
  {"alleles_by_uniquename":{"SJAG_02252:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02252","name":"ace2delta","uniquename":"SJAG_02252:allele-1"},"SJAG_03143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03143","name":"sep1delta","uniquename":"SJAG_03143:allele-1"},"SJAG_03444:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03444","name":"agn1delta","uniquename":"SJAG_03444:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001971"},{"annotations":[121380,121379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006557"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis is abnormal. Cell separation is the process of physically separating progeny cells after cytokinesis is complete, and involves enzymatic digestion of septum components.","definition_xrefs":["PomBase:mah","GO:0000920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell division during vegetative growth","termid":"FYPO:0000186"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02252":null,"SJAG_03143":null,"SJAG_03444":null},"genotype_count":3,"genotypes_by_uniquename":{"ace2delta":{"display_name":"ace2delta","display_uniquename":"ace2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02252:allele-1","expression":"Null"}]}]},"agn1delta":{"display_name":"agn1delta","display_uniquename":"agn1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03444:allele-1","expression":"Null"}]}]},"sep1delta":{"display_name":"sep1delta","display_uniquename":"sep1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03143:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell separation after cytokinesis","references_by_uniquename":{"PMID:22300943":null,"PMID:24699070":null},"single_locus_annotated_genes":["SJAG_03143","SJAG_03444","SJAG_02252"],"single_locus_genotype_uniquenames":["sep1delta","ace2delta","agn1delta"],"synonyms":[{"name":"abnormal cell separation after cytokinesis during mitotic cell cycle","type":"related"},{"name":"abnormal cell separation after cytokinesis during vegetative growth","type":"exact"},{"name":"abnormal mitotic cytokinetic cell separation","type":"exact"},{"name":"abnormal septum digestion after cytokinesis","type":"exact"}],"termid":"FYPO:0000164","terms_by_termid":{"FYECO:0000137":null,"FYPO:0001971":null,"FYPO:0006557":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0120057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mam33 family protein, Mam3302","termid":"PBO:0120057"}


id: PBO:0046875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM3D antisense RNA 1","termid":"PBO:0046875"}


id: GO:0032791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lead (Pb) ions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion binding","termid":"GO:0046872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0046872","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"lead ion binding","termid":"GO:0032791"}


id: GO:1901342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vasculature development.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"vasculature development","termid":"GO:0001944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasculature development","synonyms":[{"name":"regulation of vascular system development","type":"related"}],"termid":"GO:1901342"}


id: GO:0070365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a hepatocyte. A hepatocyte is specialized epithelial cell that is organized into interconnected plates called lobules, and is the main structural component of the liver.","definition_xrefs":["PMID:7588884","CL:0000182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"part_of","term_name":"liver development","termid":"GO:0001889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatocyte differentiation","synonyms":[{"name":"liver cell differentiation","type":"exact"}],"termid":"GO:0070365"}


id: SO:0001171
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A component of the large ribosomal subunit in mitochondrial rRNA.","definition_xrefs":["RSC:cb"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001171 rRNA_21S (obsolete SO:0001171)","synonyms":[{"name":"21S LSU rRNA","type":"exact"},{"name":"21S rRNA","type":"exact"},{"name":"21S ribosomal RNA","type":"exact"},{"name":"rRNA 21S","type":"exact"}],"termid":"SO:0001171"}


id: PBO:0091765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating type M-specific polypeptide Mi at silenced MAT3 locus","termid":"PBO:0091765"}


id: FYPO:0005725
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of protein methyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal protein methyltransferase activity","termid":"FYPO:0005723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein methyltransferase activity","synonyms":[{"name":"reduced protein methyltransferase activity","type":"exact"}],"termid":"FYPO:0005725"}


id: PBO:0114488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial aldehyde dehydrogenase; required for growth on ethanol and conversion of acetaldehyde to acetate; phosphorylated; activity is K+ dependent; utilizes NADP+ or NAD+ equally as coenzymes; expression is glucose repressed; can substitute for cytosolic NADP-dependent aldehyde dehydrogenase when directed to the cytosol; polymerizes into filaments in meiotic cells; human homolog ALDH2 can complement yeast ald4 mutant","termid":"PBO:0114488"}


id: PBO:0048035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III and SPRY domain containing 2","termid":"PBO:0048035"}


id: GO:0008907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the integration of one DNA segment into another.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"integrase activity","secondary_identifiers":["Reactome:R-HSA-164523"],"termid":"GO:0008907"}


id: GO:2000785
data:
  {"annotated_genes":["SJAG_05289","SJAG_03851"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110530,110623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of autophagosome assembly.","definition_xrefs":["GOC:autophagy","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vacuole organization","termid":"GO:0044088"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"autophagosome assembly","termid":"GO:0000045"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03851":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of autophagosome assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of PAS formation","type":"related"},{"name":"regulation of autophagic vacuole assembly","type":"exact"},{"name":"regulation of autophagic vacuole formation","type":"related"},{"name":"regulation of autophagosome biosynthesis","type":"exact"},{"name":"regulation of autophagosome formation","type":"exact"}],"termid":"GO:2000785","terms_by_termid":{"GO:2000786":null}}


id: PATO:0000853
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000853 blinking reflex value (obsolete PATO:0000853)","termid":"PATO:0000853"}


id: MONDO:0021475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the nasal cavity.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system benign neoplasm","termid":"MONDO:0000382"},{"relation_name":"is_a","term_name":"sensory organ benign neoplasm","termid":"MONDO:0000633"},{"relation_name":"is_a","term_name":"nasal cavity neoplasm","termid":"MONDO:0004756"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of nasal cavity","secondary_identifiers":["SCTID:92241005","UMLS:C0347215","MEDGEN:83859","NCIT:C4603","icd11.foundation:44101401","ICD9:212.0"],"synonyms":[{"name":"benign nasal cavity neoplasm","type":"exact"},{"name":"benign nasal cavity tumor","type":"exact"},{"name":"benign nasal cavity tumour","type":"exact"},{"name":"benign neoplasm of the nasal cavity","type":"exact"},{"name":"benign tumor of nasal cavity","type":"exact"},{"name":"benign tumor of the nasal cavity","type":"exact"},{"name":"benign tumour of nasal cavity","type":"exact"},{"name":"benign tumour of the nasal cavity","type":"exact"},{"name":"nasal cavity benign neoplasm","type":"exact"}],"termid":"MONDO:0021475","xrefs":{"Monarch":{"xref_id":"0021475"}}}


id: PBO:0061388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 48","termid":"PBO:0061388"}


id: GO:0031272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly of pseudopodia.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120032"},{"relation_name":"regulates","term_name":"pseudopodium assembly","termid":"GO:0031269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of pseudopodium assembly","synonyms":[{"name":"regulation of pseudopodium formation","type":"related"}],"termid":"GO:0031272"}


id: GO:0001084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a basal RNA polymerase II transcription factor of the TFIID class in order to modulate transcription. The transcription factor may or may not also interact selectively with DNA as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, TFIID-class binding (obsolete GO:0001084)","synonyms":[{"name":"TFIID-class binding transcription factor activity","type":"exact"}],"termid":"GO:0001084"}


id: FYPO:0003563
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the first meiotic nuclear division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiosis","termid":"FYPO:0000478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiosis I","synonyms":[{"name":"normal first meiotic nuclear division","type":"exact"},{"name":"normal meiosis I progression","type":"exact"}],"termid":"FYPO:0003563"}


id: PBO:0113207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial fission factor (mitofissin) essential for mitophagy; required for Dmn1p-mediated mitochondrial fission; directly binds to lipid membranes and brings about lipid membrane fragility to facilitate membrane fission; S. pombe homolog complements null mutant","termid":"PBO:0113207"}


id: MONDO:0030918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 52","secondary_identifiers":["GARD:16472","OMIM:617796","UMLS:C4540478","DOID:0080231","EFO:0009152","MEDGEN:1615839"],"synonyms":[{"name":"MRD52","type":"related"},{"name":"autosomal dominant intellectual disability 52","type":"related"},{"name":"autosomal dominant mental retardation 52","type":"related"},{"name":"intellectual disability, autosomal dominant 52","type":"exact"},{"name":"mental retardation, autosomal dominant 52","type":"related"}],"termid":"MONDO:0030918","xrefs":{"Monarch":{"xref_id":"0030918"}}}


id: PR:O60146
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- can1 gene.","definition_xrefs":["UniProtKB:O60146","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C18H10.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.16","synonyms":[{"name":"Spom972h-can1","type":"exact"}],"termid":"PR:O60146"}


id: PR:Q09675
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hsp3102 gene.","definition_xrefs":["UniProtKB:Q09675","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-independent glyoxalase hsp3102 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.02c","synonyms":[{"name":"Spom972h-hsp3102","type":"exact"},{"name":"glyoxalase 3 homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heat shock protein 31 homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09675"}


id: GO:0009643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A response to light intensity in which exposure to medium-intensity light results in increased tolerance to high-intensity light.","definition_xrefs":["PMID:11069694","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light intensity","termid":"GO:0009642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photosynthetic acclimation","synonyms":[{"name":"light acclimatization","type":"exact"},{"name":"photoacclimation","type":"exact"}],"termid":"GO:0009643"}


id: SO:0000434
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence of the target DNA that is duplicated when a transposable element or phage inserts; usually found at each end the insertion.","direct_ancestors":[{"relation_name":"derives_from","term_name":"transposable_element","termid":"SO:0000101"},{"relation_name":"is_a","term_name":"direct_repeat","termid":"SO:0000314"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target_site_duplication","synonyms":[{"name":"target site duplication","type":"exact"}],"termid":"SO:0000434"}


id: PBO:0044612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 13 pseudogene 3","termid":"PBO:0044612"}


id: PBO:0045716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F3 intronic transcript 1","termid":"PBO:0045716"}


id: MONDO:0044343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any degenerative disorder affecting one or more vertebral disks of the cervical spine.","definition_xrefs":["NCIT:C27156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intervertebral disk degenerative disorder","termid":"MONDO:0011385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical disk degenerative disorder","secondary_identifiers":["UMLS:C0410606","EFO:0009537","SCTID:69195002","MEDGEN:96081"],"synonyms":[{"name":"cervical Disc Degeneration","type":"exact"},{"name":"cervical Disc degenerative disease","type":"exact"},{"name":"cervical Disc degenerative disorder","type":"exact"},{"name":"cervical region of vertebral column intervertebral disc degenerative disorder","type":"exact"},{"name":"cervical region of vertebral column intervertebral disk degenerative disorder","type":"exact"},{"name":"degeneration of cervical intervertebral disc","type":"exact"},{"name":"degeneration of cervical intervertebral disk","type":"exact"},{"name":"intervertebral disc degenerative disorder of cervical region of vertebral column","type":"exact"},{"name":"intervertebral disk degenerative disorder of cervical region of vertebral column","type":"exact"}],"termid":"MONDO:0044343","xrefs":{"Monarch":{"xref_id":"0044343"}}}


id: FYECO:0000340
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which an iron chelator was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ iron chelator","termid":"FYECO:0000340"}


id: SO:0001096
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with copper ions.","definition_xrefs":["EBIBS:GAR","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_metal_contact","termid":"SO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_copper_ion_contact_site","secondary_identifiers":["BS:00146"],"synonyms":[{"name":"Cu_contact_site","type":"exact"},{"name":"polypeptide copper ion contact site","type":"exact"}],"termid":"SO:0001096"}


id: PATO:0002052
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An occurrence which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased occurrence","synonyms":[{"name":"decreased incidence","type":"exact"}],"termid":"PATO:0002052"}


id: GO:0042255
data:
  {"annotated_genes":["SJAG_00323","SJAG_02340","SJAG_00503","SJAG_04992","SJAG_04304","SJAG_03971","SJAG_03424","SJAG_02390","SJAG_02754","SJAG_02830","SJAG_01568","SJAG_04746","SJAG_00231","SJAG_01339","SJAG_04940","SJAG_01122","SJAG_03846","SJAG_00689","SJAG_02427","SJAG_02840","SJAG_00659","SJAG_04395","SJAG_02803","SJAG_03458","SJAG_02952","SJAG_02535","SJAG_01169","SJAG_03466","SJAG_01454","SJAG_01606","SJAG_01420","SJAG_01839","SJAG_02891","SJAG_04108","SJAG_05679","SJAG_02508","SJAG_03496","SJAG_04204","SJAG_04168","SJAG_04998","SJAG_04524","SJAG_02436","SJAG_01161","SJAG_02335","SJAG_05248","SJAG_01365","SJAG_02184","SJAG_02479","SJAG_00572","SJAG_02868","SJAG_01548","SJAG_00722","SJAG_00949","SJAG_02759","SJAG_01811","SJAG_04492","SJAG_04004","SJAG_04669","SJAG_00882","SJAG_04180","SJAG_03012","SJAG_03617","SJAG_03773","SJAG_03155","SJAG_01296","SJAG_04066","SJAG_00069","SJAG_02749","SJAG_04599","SJAG_03798","SJAG_03080"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110675],"is_not":false,"summary":null,"term":"GO:0042255"},{"annotations":[120931,109396,102518,104454,94687,102658,105438,101093,102324,57344,91496,57991,110980,114128,117781,81267,114891,118657,99889,94268,112788,107956,117780],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902626"},{"annotations":[99890,104455,93979,107166,106751,98977,105985,106065,106217,112714,101377,118581,89509,96736,118582,112715],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180023"},{"annotations":[97769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042256"},{"annotations":[103215,110350,109154,113977],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902775"},{"annotations":[73890,74511,67327,92912,64941,72871,92913,74169],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000027"},{"annotations":[71739,76359,77007,76511,75005,65415,78439,73478,76289,79017,120640,96658,78426,62813,63486,69267,76483,75152],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000028"},{"annotations":[74673,115061],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034462"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of the mature ribosome and of its subunits.","definition_xrefs":["GOC:ma","PMID:30467428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"},{"relation_name":"part_of","term_name":"ribosome biogenesis","termid":"GO:0042254"}],"gene_count":71,"genes_by_uniquename":{"SJAG_00069":null,"SJAG_00231":null,"SJAG_00323":null,"SJAG_00503":null,"SJAG_00572":null,"SJAG_00659":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00882":null,"SJAG_00949":null,"SJAG_01122":null,"SJAG_01161":null,"SJAG_01169":null,"SJAG_01296":null,"SJAG_01339":null,"SJAG_01365":null,"SJAG_01420":null,"SJAG_01454":null,"SJAG_01548":null,"SJAG_01568":null,"SJAG_01606":null,"SJAG_01811":null,"SJAG_01839":null,"SJAG_02184":null,"SJAG_02335":null,"SJAG_02340":null,"SJAG_02390":null,"SJAG_02427":null,"SJAG_02436":null,"SJAG_02479":null,"SJAG_02508":null,"SJAG_02535":null,"SJAG_02749":null,"SJAG_02754":null,"SJAG_02759":null,"SJAG_02803":null,"SJAG_02830":null,"SJAG_02840":null,"SJAG_02868":null,"SJAG_02891":null,"SJAG_02952":null,"SJAG_03012":null,"SJAG_03080":null,"SJAG_03155":null,"SJAG_03424":null,"SJAG_03458":null,"SJAG_03466":null,"SJAG_03496":null,"SJAG_03617":null,"SJAG_03773":null,"SJAG_03798":null,"SJAG_03846":null,"SJAG_03971":null,"SJAG_04004":null,"SJAG_04066":null,"SJAG_04108":null,"SJAG_04168":null,"SJAG_04180":null,"SJAG_04204":null,"SJAG_04304":null,"SJAG_04395":null,"SJAG_04492":null,"SJAG_04524":null,"SJAG_04599":null,"SJAG_04669":null,"SJAG_04746":null,"SJAG_04940":null,"SJAG_04992":null,"SJAG_04998":null,"SJAG_05248":null,"SJAG_05679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042254","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"ribosome assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0042257"],"synonyms":[{"name":"ribosomal subunit assembly","type":"narrow"}],"termid":"GO:0042255","terms_by_termid":{"GO:0000027":null,"GO:0000028":null,"GO:0034462":null,"GO:0042255":null,"GO:0042256":null,"GO:0180023":null,"GO:1902626":null,"GO:1902775":null}}


id: GO:0044359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the function of proteins in a second organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of molecular function in another organism (obsolete GO:0044359)","synonyms":[{"name":"modulation of molecular function in other organism","type":"exact"}],"termid":"GO:0044359"}


id: PBO:0089527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate 1-dehydrogenase Zwf1","termid":"PBO:0089527"}


id: PBO:0075454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 5 like 1","termid":"PBO:0075454"}


id: GO:0030938
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XVIII) chains.","definition_xrefs":["PMID:21421911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiplexin collagen trimer","termid":"GO:0140156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type XVIII trimer","termid":"GO:0030938"}


id: PBO:0031862
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_component_organization_phenotype","termid":"PBO:0031862"}


id: PBO:0004715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK-related kinase Shk1","termid":"PBO:0004715"}


id: PR:O74635
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit RPB9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01964","PANTHER:PTHR11239:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II subunit RPB9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPYUG7.04c","secondary_identifiers":["UniProtKB:O74635"],"synonyms":[{"name":"DNA-directed RNA polymerase II 13.2 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DNA-directed RNA polymerase II subunit 9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II subunit B9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR2I","type":"exact"}],"termid":"PR:O74635"}


id: PBO:0039878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 35","termid":"PBO:0039878"}


id: MONDO:0009570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, multiple congenital anomalies/dysmorphic syndrome characterized by facial dysmorphsim (prominent superciliary arcs, synophrys, strabismus, large, anteverted ears, large nose, malocclusion of teeth), delayed psychomotor development, intellectual disability and congenital heart defects (e.g. pulmonic stenosis, patent ductus arteriosus, atrial septal defect). Additional features include thorax deformation (pectus excavatum/carinatum), kyphoscoliosis, diastasis recti and cryptorchidism.","definition_xrefs":["Orphanet:2471"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"McDonough syndrome","secondary_identifiers":["MEDGEN:162902","UMLS:C0796038","icd11.foundation:1349711155","OMIM:248950","MESH:C538158","SCTID:715441004","GARD:3424"],"synonyms":[{"name":"McDonough syndrome","type":"exact"},{"name":"intellectual disability, peculiar facies, kyphoscoliosis, diastasis recti, cryptorchidism, and congenital heart defect","type":"related"},{"name":"mental retardation, peculiar facies, kyphoscoliosis, diastasis recti, cryptorchidism, and congenital heart defect","type":"related"}],"termid":"MONDO:0009570","xrefs":{"Monarch":{"xref_id":"0009570"}}}


id: FYPO:0000296
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[121435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[121535],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[121423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[121539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000198"},{"annotations":[121593,121359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[121512],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003315"},{"annotations":[121456],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[121424,121671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[121536],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects the organization of the actin cytoskeleton. Actin cytoskeleton organization results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and associated proteins.","definition_xrefs":["GO:0030036","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton organization phenotype","termid":"FYPO:0000295"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_03596":null,"SJAG_04280":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":10,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc15-A(L264P,P442T aa)","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]}]},"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03596","SJAG_04280","SJAG_04522","SJAG_02392","SJAG_01143"],"name":"actin cytoskeleton organization phenotype","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_01143","SJAG_02592","SJAG_04280","SJAG_02392","SJAG_03596","SJAG_04703","SJAG_04522"],"single_locus_genotype_uniquenames":["cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","for3delta","pom1delta","rga4delta","mid1delta","sty1delta"],"synonyms":[{"name":"actin cytoskeleton organisation phenotype","type":"exact"},{"name":"actin cytoskeleton organization phenotype during mitotic cell cycle","type":"related"},{"name":"actin cytoskeleton organization phenotype during vegetative growth","type":"exact"},{"name":"fission yeast actin cytoskeleton organization phenotype","type":"exact"}],"termid":"FYPO:0000296","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000198":null,"FYPO:0000231":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0003315":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0051501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving diterpene phytoalexins, a class of diterpene formed in plants in response to fungal infection, physical damage, chemical injury, or a pathogenic process; they are sometimes referred to as plant antibiotics. Diterpenes are unsaturated hydrocarbons containing 20 carbon atoms and 4 branched methyl groups and are made up of isoprenoid units.","definition_xrefs":["GOC:ai","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"},{"relation_name":"is_a","term_name":"phytoalexin metabolic process","termid":"GO:0052314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"diterpene phytoalexin metabolic process","synonyms":[{"name":"diterpene phytoalexin metabolism","type":"exact"}],"termid":"GO:0051501"}


id: GO:0006157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxyadenosine, 2-deoxyribosyladenine, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyadenosine metabolic process","termid":"GO:0046090"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside catabolic process","termid":"GO:0046124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"deoxyadenosine catabolic process","secondary_identifiers":["GO:0006159"],"synonyms":[{"name":"deoxyadenosine breakdown","type":"exact"},{"name":"deoxyadenosine catabolism","type":"exact"},{"name":"deoxyadenosine degradation","type":"exact"},{"name":"deoxyadenosine phosphorolysis","type":"related"}],"termid":"GO:0006157"}


id: FYPO:0000701
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype in which caffeine does not override the DNA damage checkpoint (as it does in wild type cells), allowing mitotic cell cycle arrest to occur.","definition_xrefs":["PomBase:mah","PMID:10224243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to caffeine","termid":"FYPO:0000207"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle checkpoint","termid":"FYPO:0001704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000298","FYPO:0000631"],"is_obsolete":false,"name":"abolished DNA damage checkpoint override in response to caffeine","synonyms":[{"name":"DNA damage checkpoint override in response to caffeine abolished","type":"exact"},{"name":"DNA damage checkpoint override in response to caffeine abolished during vegetative growth","type":"exact"},{"name":"abolished DNA damage checkpoint override in response to caffeine during mitotic cell cycle","type":"related"},{"name":"caffeine-mediated DNA damage checkpoint override abolished","type":"exact"}],"termid":"FYPO:0000701"}


id: FYPO:0007417
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which telomere clustering is normal (i.e. indistinguishable from wild type) during G0 phase. Normally, telomeres cluster at the nuclear periphery during vegetative growth or G0, but whereas telomeres form two to three clusters in vegetative cells, a single cluster forms in G0.","definition_xrefs":["GO:0120110","PMID:31980821","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere localization","termid":"FYPO:0004973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal telomere clustering during G0","synonyms":[{"name":"normal telomere clustering during cell quiescence","type":"exact"},{"name":"normal telomere clustering during quiescence","type":"exact"}],"termid":"FYPO:0007417"}


id: FYPO:0007738
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin at the 3' ends of genes that can be transcribed by RNA polymerase II is normal (i.e. indistinguishable from wild type) during metaphase of the mitotic cell cycle.","definition_xrefs":["PMID:33771877","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at 3' end of genes","termid":"FYPO:0007731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to chromatin at 3' end of RNA polymerase II-transcribed genes during mitotic metaphase","synonyms":[{"name":"normal condensin localization to chromatin at 3' end of RNA polymerase II-transcribed genes during mitotic metaphase","type":"broad"},{"name":"normal protein localisation to chromatin at 3' end of RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"},{"name":"normal protein localization to chromatin at 3' end of RNA polymerase II-transcribed genes during metaphase during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at 3' end of RNA polymerase II-transcribed genes during metaphase of mitotic cell cycle","type":"exact"},{"name":"normal protein localization to chromatin downstream of RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007738"}


id: PBO:0056949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 16-1","termid":"PBO:0056949"}


id: PBO:0075816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scavenger receptor cysteine rich family member with 5 domains","termid":"PBO:0075816"}


id: MONDO:0020331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Indolent systemic mastocytosis (ISM) is a benign form of systemic mastocytosis (SM) characterized by an abnormal proliferation of mast cells either only in bone marrow or in numerous tissues.","definition_xrefs":["Orphanet:98848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"systemic mastocytosis","termid":"MONDO:0016586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"indolent systemic mastocytosis","secondary_identifiers":["SCTID:70910003","UMLS:C0272203","icd11.foundation:353283231","ONCOTREE:ISM","ICDO:9741/1","GARD:19595","DOID:4660","MedDRA:10056452","MEDGEN:82897","NCIT:C9286"],"synonyms":[{"name":"ISM","type":"exact"},{"name":"indolent systemic mastocytosis (morphologic abnormality)","type":"exact"},{"name":"ism","type":"exact"}],"termid":"MONDO:0020331","xrefs":{"Monarch":{"xref_id":"0020331"}}}


id: PBO:0013784
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolus, Spindle, Kinetochore","termid":"PBO:0013784"}


id: PBO:0029815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_after_spore_germination,_single_or_double_cell_division,_abnormal_cell_shape_(obsolete_FYPO:0002422)","termid":"PBO:0029815"}


id: GO:1903061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein lipidation.","definition_xrefs":["PMID:21909394","GOC:TermGenie","GOC:rph","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"positive regulation of lipoprotein metabolic process","termid":"GO:0050747"},{"relation_name":"is_a","term_name":"regulation of protein lipidation","termid":"GO:1903059"},{"relation_name":"positively_regulates","term_name":"protein lipidation","termid":"GO:0006497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein lipidation","synonyms":[{"name":"activation of lipid:protein modification","type":"narrow"},{"name":"activation of protein amino acid lipidation","type":"narrow"},{"name":"activation of protein lipidation","type":"narrow"},{"name":"positive regulation of lipid:protein modification","type":"exact"},{"name":"positive regulation of protein amino acid lipidation","type":"exact"},{"name":"up regulation of lipid:protein modification","type":"exact"},{"name":"up regulation of protein amino acid lipidation","type":"exact"},{"name":"up regulation of protein lipidation","type":"exact"},{"name":"up-regulation of lipid:protein modification","type":"exact"},{"name":"up-regulation of protein amino acid lipidation","type":"exact"},{"name":"up-regulation of protein lipidation","type":"exact"},{"name":"upregulation of lipid:protein modification","type":"exact"},{"name":"upregulation of protein amino acid lipidation","type":"exact"},{"name":"upregulation of protein lipidation","type":"exact"}],"termid":"GO:1903061"}


id: PBO:0084337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinetochore checkpoint WD40 repeat protein; localizes to kinetochores during prophase and metaphase, delays anaphase in the presence of unattached kinetochores; forms complexes with Mad1p-Bub1p and with Cdc20p, binds Mad2p and Mad3p; functions at kinetochore to activate APC/C-Cdc20p for normal mitotic progression","termid":"PBO:0084337"}


id: PBO:0088273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-dependent ATPase/ ubiquitin-protein ligase E3 Irc20","termid":"PBO:0088273"}


id: PBO:0071325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 1","termid":"PBO:0071325"}


id: FYECO:0000295
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A sequential growth condition in which cells are first grown at a low temperature, transferred to standard, and then to high temperature.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two-step temperature shift, low to standard, standard to high","termid":"FYECO:0000295"}


id: GO:0061539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of octopamine by a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"octopamine secretion","termid":"GO:0061539"}


id: MONDO:0018489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune encephalopathy with parasomnia and obstructive sleep apnea is a rare neurologic disorder characterized by a unique non-REM and REM parasomnia with sleep breathing dysfunction, gait instability and repetitive episodes of respiratory insufficiency, as well as autoantibodies against IgLON5. Patients may present stridor, chorea, limb ataxia, abnormal ocular movements, and bulbar symptoms (i.e. dysphagia, dysarthria, episodic central hypoventilation) with normal brain MRI. Excessive day sleepiness and cognitive deterioration have also been reported.","definition_xrefs":["Orphanet:420789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of central nervous system","termid":"MONDO:0000568"},{"relation_name":"is_a","term_name":"sleep-wake disorder","termid":"MONDO:0003406"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune encephalopathy with parasomnia and obstructive sleep apnea","secondary_identifiers":["GARD:21749","MEDGEN:1644256","SCTID:765751002","UMLS:C4707562"],"synonyms":[{"name":"anti-IgLON5 disease","type":"exact"},{"name":"anti-IgLON5 syndrome","type":"exact"}],"termid":"MONDO:0018489","xrefs":{"Monarch":{"xref_id":"0018489"}}}


id: PBO:0002215
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by proline","termid":"PBO:0002215"}


id: GO:0004054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine + ATP = N(omega)-phospho-L-arginine + ADP + 2 H+.","definition_xrefs":["RHEA:22940","EC:2.7.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, nitrogenous group as acceptor","termid":"GO:0016775"},{"relation_name":"is_a","term_name":"amino acid kinase activity","termid":"GO:0019202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"arginine kinase activity","secondary_identifiers":["MetaCyc:ARGININE-KINASE-RXN","KEGG_REACTION:R00554"],"synonyms":[{"name":"ATP:L-arginine N-phosphotransferase activity","type":"related"},{"name":"adenosine 5'-triphosphate-arginine phosphotransferase activity","type":"related"},{"name":"adenosine 5'-triphosphate:L-arginine","type":"related"},{"name":"arginine phosphokinase activity","type":"related"}],"termid":"GO:0004054"}


id: GO:0050896
data:
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id: GO:0061463
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id: MONDO:0000700
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id: GO:0044650
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id: PBO:0028044
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id: PBO:0003161
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex delta subunit Cct4","termid":"PBO:0003161"}


id: MONDO:0030915
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive non-syndromic intellectual disability that has material basis in an autosomal recessive mutation of the RUSC2 gene on chromosome 9p13.","definition_xrefs":["DOID:0080239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 61","secondary_identifiers":["MEDGEN:1622296","OMIM:617773","UMLS:C4540424"],"synonyms":[{"name":"Alwadei syndrome","type":"related"},{"name":"MRT61","type":"related"},{"name":"autosomal recessive intellectual disability 61","type":"related"},{"name":"autosomal recessive mental retardation 61","type":"related"},{"name":"intellectual disability, autosomal recessive 61","type":"exact"},{"name":"mental retardation, autosomal recessive 61","type":"related"}],"termid":"MONDO:0030915","xrefs":{"Monarch":{"xref_id":"0030915"}}}


id: MONDO:0001127
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tendinitis that involves the tibialis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tendinitis","termid":"MONDO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"tibialis tendinitis","secondary_identifiers":["DOID:10810","UMLS:C0158321","SCTID:50127006","ICD9:726.72","MEDGEN:510515"],"synonyms":[{"name":"tendinitis of tibialis","type":"exact"},{"name":"tibialis tendinitis","type":"exact"}],"termid":"MONDO:0001127","xrefs":{"Monarch":{"xref_id":"0001127"}}}


id: PBO:0083985
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutamine synthetase (GS); synthesizes glutamine from glutamate and ammonia; with Glt1p, forms the secondary pathway for glutamate biosynthesis from ammonia; expression regulated by nitrogen source and by amino acid limitation; forms filaments of back-to-back stacks of cylindrical homo-decamers at low pH, leading to enzymatic inactivation and storage during states of advanced cellular starvation; relocalizes from nucleus to cytoplasmic foci upon DNA replication stress","termid":"PBO:0083985"}


id: GO:0050184
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a (9Z)-octadecenoyl-containing glycerolipid + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = a (9Z,12Z)-octadecadienoyl-containing glycerolipid + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["RHEA:46332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acyl-lipid omega-6 desaturase (cytochrome b5) activity","secondary_identifiers":["GO:0102860","GO:0102861","KEGG_REACTION:R03475","GO:0102855","EC:1.14.19.22","GO:0102857","GO:0102871","MetaCyc:RXN-9669"],"synonyms":[{"name":"1-16:0-2-18:1-phosphatidylcholine desaturase activity","type":"narrow"},{"name":"1-18:1-2-18:2-phosphatidylcholine desaturase activity","type":"narrow"},{"name":"1-18:1-2-18:2-phosphatidylcholine synthase activity","type":"narrow"},{"name":"1-18:1-2-18:3-phosphatidylcholinedesaturase activity","type":"narrow"},{"name":"1-18:2-2-18:1-phosphatidylcholine desaturase activity (SN2-18:2 forming)","type":"narrow"},{"name":"1-acyl-2-oleoyl-sn-glycero-3-phosphocholine:NAD+ delta12-oxidoreductase activity","type":"related"},{"name":"linoleate synthase activity","type":"related"},{"name":"oleate desaturase activity","type":"related"},{"name":"oleoyl-CoA desaturase activity","type":"related"},{"name":"oleoylphosphatidylcholine desaturase activity","type":"related"},{"name":"phosphatidylcholine desaturase activity","type":"related"}],"termid":"GO:0050184"}


id: MONDO:0030606
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id: PBO:0050867
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of DNA binding 4","termid":"PBO:0050867"}


id: GO:0046173
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id: PBO:0043754
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id: FYECO:0000366
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id: FYECO:0000397
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id: PR:O94667
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- prf1 gene.","definition_xrefs":["UniProtKB:O94667","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase-associated protein C651.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.09c","synonyms":[{"name":"Spom972h-prf1","type":"exact"},{"name":"protein RTF1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94667"}


id: PBO:0082696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the kinetochore-associated Ndc80 complex; involved in chromosome segregation, spindle checkpoint activity, and kinetochore clustering; evolutionarily conserved; other members include Ndc80p, Nuf2p, Spc24p, and Spc25p","termid":"PBO:0082696"}


id: PBO:0041510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 14 open reading frame 132","termid":"PBO:0041510"}


id: FYPO:0008219
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed during the G2/M phase of the mitotic cell cycle in which acetylation of lysine at position 56 of histone H3 in regions of the genome that are actively transcribed occurs to a greater extent than normal.","definition_xrefs":["PMID:27268234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K56 acetylation in transcribed regions during vegetative growth","termid":"FYPO:0002370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K56 acetylation in transcribed regions during mitotic G2/M phase","termid":"FYPO:0008219"}


id: PBO:0078232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 14","termid":"PBO:0078232"}


id: PR:O13792
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A spliceosome RNA helicase BAT1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01507","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase uap56 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.14c","secondary_identifiers":["UniProtKB:O13792"],"synonyms":[{"name":"Spom972h-DDX39B","type":"exact"}],"termid":"PR:O13792"}


id: GO:0101020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: estrogen + reduced [NADPH--hemoprotein reductase] + O2 = 16-alpha-hydroxyestrogen + oxidized [NADPH--hemoprotein reductase] + H2O.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"estrogen 16-alpha-hydroxylase activity","synonyms":[{"name":"oestrogen 16-alpha-hydroxylase activity","type":"exact"}],"termid":"GO:0101020"}


id: FYPO:0005448
data:
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id: PBO:0060293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL6 pseudogene 1","termid":"PBO:0060293"}


id: PBO:0041879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CATIP antisense RNA 1","termid":"PBO:0041879"}


id: MONDO:0006735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retrograde flow of duodenal contents (bile acids; pancreatic juice) into the stomach.","definition_xrefs":["MESH:D004383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duodenal disorder","termid":"MONDO:0002866"},{"relation_name":"is_a","term_name":"gastroesophageal reflux disease","termid":"MONDO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"duodenogastric reflux","secondary_identifiers":["DOID:4071","UMLS:C0013299","MEDGEN:4420","MedDRA:10060865","EFO:1000909"],"synonyms":[{"name":"duodenogastric reflux (finding)","type":"exact"}],"termid":"MONDO:0006735","xrefs":{"Monarch":{"xref_id":"0006735"}}}


id: PBO:0068716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 5, pseudogene","termid":"PBO:0068716"}


id: PBO:0066537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 3","termid":"PBO:0066537"}


id: GO:0004228
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of gelatin type I and collagen types IV, V, VII, X. Cleaves the collagen-like sequence Pro-Gln-Gly-Ile-Ala-Gly-Gln at the Gly-Ile bond.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete gelatinase A activity (obsolete GO:0004228)","synonyms":[{"name":"3/4 collagenase activity","type":"related"},{"name":"72 kDa gelatinase type A","type":"related"},{"name":"72-kDa gelatinase activity","type":"narrow"},{"name":"MMP 2","type":"related"},{"name":"MMP-2","type":"exact"},{"name":"collagenase IV","type":"related"},{"name":"collagenase type IV","type":"related"},{"name":"gelatinase A activity","type":"exact"},{"name":"matrix metalloproteinase 2 activity","type":"related"},{"name":"matrix metalloproteinase 5","type":"related"},{"name":"type IV collagen metalloproteinase","type":"broad"},{"name":"type IV collagenase activity","type":"related"},{"name":"type IV collagenase/gelatinase activity","type":"related"}],"termid":"GO:0004228"}


id: MONDO:0014256
data:
  {"annotated_genes":["SJAG_03592"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87654],"is_not":false,"summary":null,"term":"MONDO:0014256"}]},"cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the NEK2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 67","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110359","OMIM:615565","ICD10CM:H35.5","UMLS:C3809954","MEDGEN:816284","GARD:15988"],"synonyms":[{"name":"NEK2 retinitis pigmentosa","type":"exact"},{"name":"RP67","type":"exact"},{"name":"retinitis pigmentosa 67","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in NEK2","type":"exact"},{"name":"retinitis pigmentosa type 67","type":"exact"}],"termid":"MONDO:0014256","terms_by_termid":{"MONDO:0014256":null},"xrefs":{"Monarch":{"xref_id":"0014256"}}}


id: PBO:0089653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 2, Pre8","termid":"PBO:0089653"}


id: GO:0045199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of the apicobasal polarity of an epithelial cell.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of apical/basal cell polarity","termid":"GO:0035090"},{"relation_name":"is_a","term_name":"establishment or maintenance of epithelial cell apical/basal polarity","termid":"GO:0045197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"maintenance of epithelial cell apical/basal polarity","termid":"GO:0045199"}


id: GO:0006934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of accumulated adhesion components such as integrins from the rear of a migrating cell toward the cell front, where they are available to form new protrusions and adhesions.","definition_xrefs":["PMID:11944043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor recycling","termid":"GO:0001881"},{"relation_name":"part_of","term_name":"negative regulation of cell adhesion involved in substrate-bound cell migration","termid":"GO:0006933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substrate-bound cell migration, adhesion receptor recycling","termid":"GO:0006934"}


id: PR:O13601
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsp1 gene.","definition_xrefs":["UniProtKB:O13601","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ-related protein rsp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.05c","synonyms":[{"name":"Spom972h-rsp1","type":"exact"}],"termid":"PR:O13601"}


id: MONDO:0012675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Corticosteroid-binding globulin deficiency is a genetic disorder characterized by extreme tiredness (fatigue), particularly after physical exertion, and low blood pressure (hypotension). Corticosteroid-binding globulin (CBG) is a protein primarily produced in the liver that attaches to cortisol, a hormone with numerous functions, including maintaining blood sugar levels, protecting the body from stress, and suppressing inflammation.When cortisol is needed in the body, CBG delivers the cortisol where it is needed and releases it. Signs and symptoms of CBG deficiency vary. While some individuals may experience no symptoms, others are found to have a fatty liver and chronic pain. Some people with CBG deficiency also have chronic fatigue syndrome. CGB deficiency is caused by mutations in the SERPINA6 gene. The SERPINA6 gene is commonly also referred to as the CBG gene. Both autosomal dominant and autosomal recessive inheritance have been reported.While there is still no cure, treatment options will depend on the type and severity of symptoms present and may involve several specialists.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corticosteroid-binding globulin deficiency","secondary_identifiers":["DOID:0090030","GARD:13101","MEDGEN:343831","Orphanet:199247","UMLS:C1852529","OMIM:611489"],"synonyms":[{"name":"CBG deficiency","type":"exact"},{"name":"Cbg deficiency","type":"related"},{"name":"Transcortin deficiency","type":"exact"},{"name":"corticosteroid-binding globulin deficiency","type":"exact"},{"name":"corticosteroid-binding globulin, elevated","type":"related"},{"name":"transcortin deficiency","type":"exact"}],"termid":"MONDO:0012675","xrefs":{"Monarch":{"xref_id":"0012675"}}}


id: _global:contains
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The inverse of contained_by.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contains","termid":"_global:contains"}


id: PBO:0076006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STIM activating enhancer","termid":"PBO:0076006"}


id: GO:0015944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which formate is converted to CO2.","definition_xrefs":["MetaCyc:PWY-1881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formate metabolic process","termid":"GO:0015942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"formate oxidation","synonyms":[{"name":"formic acid oxidation","type":"exact"}],"termid":"GO:0015944"}


id: GO:0047669
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose + 1,4-alpha-D-glucosyl(n) = D-fructose + 1,4-alpha-D-glucosyl(n+1).","definition_xrefs":["MetaCyc:AMYLOSUCRASE-RXN","EC:2.4.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"amylosucrase activity","secondary_identifiers":["RHEA:24572"],"synonyms":[{"name":"sucrose-1,4-alpha-glucan glucosyltransferase activity","type":"related"},{"name":"sucrose-glucan glucosyltransferase activity","type":"related"},{"name":"sucrose:1,4-alpha-D-glucan 4-alpha-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0047669"}


id: PBO:0030645
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_pH","termid":"PBO:0030645"}


id: SO:0001315
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_acetyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_acetyladenosine","secondary_identifiers":["RNAMOD:102"],"synonyms":[{"name":"N6 acetyladenosine","type":"exact"},{"name":"N6-acetyladenosine","type":"exact"},{"name":"ac6A","type":"exact"}],"termid":"SO:0001315"}


id: MONDO:0009857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent Mullerian duct syndrome (PMDS) is a rare disorder of sex development (DSD) characterized by the persistence of Müllerian derivatives, the uterus and/or fallopian tubes, in otherwise normally virilized boys.","definition_xrefs":["Orphanet:2856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohermaphroditism","termid":"MONDO:0005518"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent Mullerian duct syndrome","secondary_identifiers":["MEDGEN:342367","NCIT:C120188","OMIM:261550","DOID:0050791","ICD9:752.89","GARD:8435","MESH:C536665","SCTID:702358005","UMLS:C1849930","icd11.foundation:697796373"],"synonyms":[{"name":"PMDS","type":"exact"},{"name":"female genital ducts in otherwise normal Male","type":"related"},{"name":"female genital ducts in otherwise normal male","type":"related"},{"name":"hernia uteri inguinale","type":"related"},{"name":"persistent MULLERIAN duct syndrome, types I and II","type":"related"},{"name":"persistent Muellerian duct syndrome","type":"exact"},{"name":"persistent Mullerian derivatives","type":"exact"},{"name":"persistent Mullerian duct syndrome","type":"exact"},{"name":"persistent Müllerian derivatives","type":"exact"},{"name":"persistent Müllerian duct syndrome","type":"related"},{"name":"persistent mullerian duct syndrome, type I","type":"exact"},{"name":"persistent mullerian duct syndrome, type II","type":"exact"},{"name":"persistent mullerian duct syndrome, types 1 and 2","type":"related"},{"name":"persistent oviduct syndrome","type":"related"},{"name":"pseudohermaphroditism, Male internal","type":"related"}],"termid":"MONDO:0009857","xrefs":{"Monarch":{"xref_id":"0009857"}}}


id: MONDO:0021628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lacrimal system disease (obsolete MONDO:0021628)","termid":"MONDO:0021628","xrefs":{"Monarch":{"xref_id":"0021628"}}}


id: MONDO:0025431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infectious diseases of cattle, sheep, and goats, characterized by blepharospasm, lacrimation, conjunctivitis, and varying degrees of corneal opacity and ulceration. In cattle the causative agent is moraxella (moraxella) bovis; in sheep, mycoplasma; rickettsia; chlamydia; or acholeplasma; in goats, rickettsia.","definition_xrefs":["MESH:D007639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"},{"relation_name":"is_a","term_name":"goat disease","termid":"MONDO:0025003"},{"relation_name":"is_a","term_name":"keratoconjunctivitis, non-human animal","termid":"MONDO:1011329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratoconjunctivitis, infectious","synonyms":[{"name":"Keratoconjunctivitides, infectious","type":"related"},{"name":"infectious Keratoconjunctivitides","type":"related"},{"name":"infectious keratoconjunctivitis","type":"related"}],"termid":"MONDO:0025431","xrefs":{"Monarch":{"xref_id":"0025431"}}}


id: FYPO:0003444
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which medial cortical nodes move in random directions such that they do not undergo an overall movement towards the cell center. During contractile ring assembly, medial cortical nodes normally move towards the cell center, and condense into a ring.","definition_xrefs":["PMID:24798735","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis during vegetative growth","termid":"FYPO:0000032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal medial cortical node condensation","synonyms":[{"name":"abnormal medial cortical node condensation during mitotic cell cycle","type":"related"},{"name":"abnormal medial cortical node condensation during vegetative growth","type":"exact"},{"name":"abnormal medial cortical node migration","type":"exact"}],"termid":"FYPO:0003444"}


id: PBO:0056678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocyte enhancer factor 2C","termid":"PBO:0056678"}


id: GO:1903753
data:
  {"annotated_genes":["SJAG_02013","SJAG_03185","SJAG_05000","SJAG_04825","SJAG_03893","SJAG_02000"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93548,96934,97874,101357,119090,120347],"is_not":false,"summary":null,"term":"GO:1903753"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of p38MAPK cascade.","definition_xrefs":["PMID:18681888","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAPK cascade","termid":"GO:0043409"},{"relation_name":"is_a","term_name":"regulation of p38MAPK cascade","termid":"GO:1900744"},{"relation_name":"negatively_regulates","term_name":"p38MAPK cascade","termid":"GO:0038066"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02000":null,"SJAG_02013":null,"SJAG_03185":null,"SJAG_03893":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of p38MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of p38 MAPK cascade","type":"exact"},{"name":"down regulation of p38 cascade","type":"exact"},{"name":"down regulation of p38MAPK cascade","type":"exact"},{"name":"down-regulation of p38 MAPK cascade","type":"exact"},{"name":"down-regulation of p38 cascade","type":"exact"},{"name":"down-regulation of p38MAPK cascade","type":"exact"},{"name":"downregulation of p38 MAPK cascade","type":"exact"},{"name":"downregulation of p38 cascade","type":"exact"},{"name":"downregulation of p38MAPK cascade","type":"exact"},{"name":"inhibition of p38 MAPK cascade","type":"narrow"},{"name":"inhibition of p38 cascade","type":"narrow"},{"name":"inhibition of p38MAPK cascade","type":"narrow"},{"name":"negative regulation of osmosensory signaling MAPK cascade","type":"narrow"},{"name":"negative regulation of p38 MAPK cascade","type":"exact"},{"name":"negative regulation of p38 cascade","type":"exact"}],"termid":"GO:1903753","terms_by_termid":{"GO:1903753":null}}


id: GO:0032782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of bile acid, composed of any of a group of steroid carboxylic acids occurring in bile, by a cell or a tissue.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"bile acid secretion","termid":"GO:0032782"}


id: PBO:0059264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L30 pseudogene 1","termid":"PBO:0059264"}


id: MONDO:0000988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Discharge or drainage of fluid from the ear.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auditory system disorder","termid":"MONDO:0002409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discharging ear","secondary_identifiers":["MEDGEN:57608","ICD9:388.6","DOID:10261","UMLS:C0155540","ICD9:388.60"],"termid":"MONDO:0000988","xrefs":{"Monarch":{"xref_id":"0000988"}}}


id: PATO:0000222
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000222 muscle elevation (obsolete PATO:0000222)","termid":"PATO:0000222"}


id: PBO:0050033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 1","termid":"PBO:0050033"}


id: MONDO:0020268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ichthyosis associated with ocular features (obsolete MONDO:0020268)","secondary_identifiers":["Orphanet:98698"],"termid":"MONDO:0020268","xrefs":{"Monarch":{"xref_id":"0020268"}}}


id: GO:1902874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of horizontal cell localization.","definition_xrefs":["GOC:TermGenie","PMID:16872597","GOC:mr","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of horizontal cell localization","termid":"GO:1902872"},{"relation_name":"positively_regulates","term_name":"horizontal cell localization","termid":"GO:0035852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of horizontal cell localization","synonyms":[{"name":"activation of horizontal cell localisation","type":"narrow"},{"name":"activation of horizontal cell localization","type":"narrow"},{"name":"activation of horizontal cell positioning","type":"narrow"},{"name":"activation of laminar positioning of retinal horizontal cell","type":"narrow"},{"name":"activation of retinal horizontal cell positioning","type":"narrow"},{"name":"positive regulation of horizontal cell localisation","type":"exact"},{"name":"positive regulation of horizontal cell positioning","type":"exact"},{"name":"positive regulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"positive regulation of retinal horizontal cell positioning","type":"exact"},{"name":"up regulation of horizontal cell localisation","type":"exact"},{"name":"up regulation of horizontal cell localization","type":"exact"},{"name":"up regulation of horizontal cell positioning","type":"exact"},{"name":"up regulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"up regulation of retinal horizontal cell positioning","type":"exact"},{"name":"up-regulation of horizontal cell localisation","type":"exact"},{"name":"up-regulation of horizontal cell localization","type":"exact"},{"name":"up-regulation of horizontal cell positioning","type":"exact"},{"name":"up-regulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"up-regulation of retinal horizontal cell positioning","type":"exact"},{"name":"upregulation of horizontal cell localisation","type":"exact"},{"name":"upregulation of horizontal cell localization","type":"exact"},{"name":"upregulation of horizontal cell positioning","type":"exact"},{"name":"upregulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"upregulation of retinal horizontal cell positioning","type":"exact"}],"termid":"GO:1902874"}


id: PBO:0053116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 2","termid":"PBO:0053116"}


id: PBO:0054306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1698","termid":"PBO:0054306"}


id: PBO:0002351
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae YDR208W","termid":"PBO:0002351"}


id: GO:1902834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of proline import into cell.","definition_xrefs":["GOC:TermGenie","PMID:24344203","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid import across plasma membrane","termid":"GO:0010958"},{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"regulates","term_name":"proline import across plasma membrane","termid":"GO:1905647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of proline import across plasma membrane","synonyms":[{"name":"regulation of proline import into cell","type":"exact"}],"termid":"GO:1902834"}


id: GO:0019789
data:
  {"annotated_genes":["SJAG_00604","SJAG_02082","SJAG_00727","SJAG_03175","SJAG_01776"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106420,77447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061656"},{"annotations":[74278,106297,74259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061665"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of SUMO from one protein to another via the reaction X-SUMO + Y = Y-SUMO + X, where both X-SUMO and Y-SUMO are covalent linkages.","definition_xrefs":["PMID:11265250","GOC:rn","PMID:11031248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00604":null,"SJAG_00727":null,"SJAG_01776":null,"SJAG_02082":null,"SJAG_03175":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0140096","GO:0019787","GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"SUMO transferase 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conjugating enzyme","type":"related"},{"name":"SUMO conjugating enzyme activity","type":"related"}],"termid":"GO:0019789","terms_by_termid":{"GO:0061656":null,"GO:0061665":null}}


id: PBO:0041092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain and WD repeat domain containing 1","termid":"PBO:0041092"}


id: MONDO:0004971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor arising from the epithelial cells. Microscopically, the neoplastic epithelial cells form cylindrical spatial configurations (cribriform or classic type of adenoid cystic carcinoma), cordlike structures (tubular type of adenoid cystic carcinoma), or solid structures (basaloid variant of adenoid cystic carcinoma). Adenoid cystic carcinomas mostly occur in the salivary glands. Other primary sites of involvement include the lacrimal gland, the larynx, and the lungs. Adenoid cystic carcinomas spread along nerve sheaths, resulting in severe pain, and they tend to recur. Lymph node metastases are unusual; hematogenous tumor spread is characteristic.","definition_xrefs":["NCIT:C2970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adenoid cystic carcinoma","secondary_identifiers":["icd11.foundation:2127202862","DOID:0080202","MEDGEN:41382","MESH:D003528","GARD:5743","UMLS:C0010606","ONCOTREE:ACYC","EFO:0000231","ICDO:8200/3"],"synonyms":[{"name":"adenocystic carcinoma","type":"exact"},{"name":"adenoid cystic cancer","type":"exact"},{"name":"adenoid cystic carcinoma","type":"exact"},{"name":"cribriform carcinoma","type":"related"},{"name":"cylindroid adenocarcinoma","type":"exact"},{"name":"cylindroma","type":"related"}],"termid":"MONDO:0004971","xrefs":{"Monarch":{"xref_id":"0004971"}}}


id: PBO:0056226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member E2","termid":"PBO:0056226"}


id: MONDO:0021459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the esophagus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign digestive system neoplasm","termid":"MONDO:0000385"},{"relation_name":"is_a","term_name":"thoracic benign neoplasm","termid":"MONDO:0000634"},{"relation_name":"is_a","term_name":"neoplasm of esophagus","termid":"MONDO:0021355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign neoplasm of esophagus","secondary_identifiers":["ICD10CM:D13.0","MEDGEN:102297","ICD9:211.0","NCIT:C3598","SCTID:92091003","UMLS:C0153942"],"synonyms":[{"name":"benign esophageal neoplasm","type":"exact"},{"name":"benign esophageal tumor","type":"exact"},{"name":"benign esophageal tumour","type":"exact"},{"name":"benign esophagus neoplasm","type":"exact"},{"name":"benign esophagus tumor","type":"exact"},{"name":"benign neoplasm of the esophagus","type":"exact"},{"name":"benign neoplasm of the oesophagus","type":"exact"},{"name":"benign oesophagus neoplasm","type":"exact"},{"name":"benign oesophagus tumour","type":"exact"},{"name":"benign tumor of esophagus","type":"exact"},{"name":"benign tumor of the esophagus","type":"exact"},{"name":"benign tumour of oesophagus","type":"exact"},{"name":"benign tumour of the oesophagus","type":"exact"},{"name":"esophagus benign neoplasm","type":"exact"},{"name":"oesophagus benign neoplasm","type":"exact"}],"termid":"MONDO:0021459","xrefs":{"Monarch":{"xref_id":"0021459"}}}


id: GO:2000075
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of site selection that occurs as part of cytokinesis.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokinesis","termid":"GO:0032466"},{"relation_name":"is_a","term_name":"regulation of cytokinesis, site selection","termid":"GO:2000073"},{"relation_name":"negatively_regulates","term_name":"cytokinesis, division site positioning","termid":"GO:0007105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytokinesis, site selection","synonyms":[{"name":"negative regulation of site selection involved in cell cycle cytokinesis","type":"exact"}],"termid":"GO:2000075"}


id: PBO:0031034
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleus_organization","termid":"PBO:0031034"}


id: PR:Q9P6I3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1198.07c gene.","definition_xrefs":["UniProtKB:Q9P6I3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannan endo-1,6-alpha-mannosidase C1198.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.07c","synonyms":[{"name":"Spom972h-SPBC1198.07c","type":"exact"},{"name":"endo-alpha-1->6-D-mannanase C1198.07c (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6I3"}


id: PBO:0064764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase G","termid":"PBO:0064764"}


id: PBO:0029657
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_iron_ion_starvation","termid":"PBO:0029657"}


id: PBO:0080160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variable charge X-linked 2","termid":"PBO:0080160"}


id: GO:0140013
data:
  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051232"},{"annotations":[101139,103368],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140642"},{"annotations":[102474,80610,90346],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010774"},{"annotations":[119708,117946,98629,119570],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045141"},{"annotations":[115984],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044821"},{"annotations":[109933],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045128"},{"annotations":[115782],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[110325,104311],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905263"},{"annotations":[90930],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0010845"},{"annotations":[106265,108682,81160,117542,91467,94634,92678,106790,72799,93351,70933,79553,102509,103071,102572,94561,105801],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007131"},{"annotations":[103269],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[98850],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0040020"},{"annotations":[118688],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904967"},{"annotations":[111055,112303,73506,110112,78606,76098,76694,119309,81088,119457],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000712"},{"annotations":[118237],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0062209"},{"annotations":[91012,92856,112293,100541,109466,97462,107426,95695,115222,118926,97216,111869,104370,110859,116096,103270,109784,99819,91619,111116,112337,102448,117929],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"One of the two nuclear divisions that occur as part of the meiotic cell cycle.","definition_xrefs":["PMID:9334324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear division","termid":"GO:0000280"},{"relation_name":"is_a","term_name":"meiotic cell cycle 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nuclear division","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"meiosis","type":"exact"}],"termid":"GO:0140013","terms_by_termid":{"GO:0000709":null,"GO:0000712":null,"GO:0007127":null,"GO:0007129":null,"GO:0007131":null,"GO:0007135":null,"GO:0010772":null,"GO:0010774":null,"GO:0010780":null,"GO:0010845":null,"GO:0010846":null,"GO:0030989":null,"GO:0030999":null,"GO:0031619":null,"GO:0032118":null,"GO:0032121":null,"GO:0040020":null,"GO:0044821":null,"GO:0045128":null,"GO:0045141":null,"GO:0045143":null,"GO:0045144":null,"GO:0051232":null,"GO:0051307":null,"GO:0051455":null,"GO:0051456":null,"GO:0051598":null,"GO:0051755":null,"GO:0062209":null,"GO:0070197":null,"GO:0090306":null,"GO:0140013":null,"GO:0140642":null,"GO:1904967":null,"GO:1905263":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1990571":null,"GO:1990813":null,"GO:1990918":null}}


id: PBO:0003127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase (predicted)","termid":"PBO:0003127"}


id: PR:O74540
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fmd3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(hydroxymethyl)glutathione dehydrogenase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC13B11.04c","synonyms":[{"name":"FALDH 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FDH 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FLD 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GSH-FDH 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fmd3","type":"exact"},{"name":"glutathione-dependent formaldehyde dehydrogenase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74540"}


id: GO:0000988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a protein or protein complex, to modulate transcription. A protein binding transcription factor may or may not also interact with the template nucleic acid (either DNA or RNA) as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, protein binding (obsolete GO:0000988)","synonyms":[{"name":"protein binding transcription factor activity","type":"exact"},{"name":"transcription factor activity","type":"broad"}],"termid":"GO:0000988"}


id: PBO:0059291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L42 pseudogene 6","termid":"PBO:0059291"}


id: PBO:0079545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA6 divergent transcript","termid":"PBO:0079545"}


id: SO:0001418
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An experimental region, defined by a tiling array experiment to be transcribed at some level.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_fragment","synonyms":[{"name":"transcribed fragment","type":"exact"},{"name":"transfrag","type":"related"}],"termid":"SO:0001418"}


id: GO:0042409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + caffeoyl-CoA = S-adenosyl-L-homocysteine + feruloyl-CoA.","definition_xrefs":["EC:2.1.1.104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"caffeoyl-CoA O-methyltransferase activity","secondary_identifiers":["MetaCyc:CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN","RHEA:16925"],"synonyms":[{"name":"S-adenosyl-L-methionine:caffeoyl-CoA 3-O-methyltransferase activity","type":"related"},{"name":"caffeoyl CoA:S-adenosyl-L-methionine O-methyltransferase activity","type":"exact"},{"name":"caffeoyl coenzyme A methyltransferase activity","type":"exact"},{"name":"caffeoyl-CoA 3-O-methyltransferase activity","type":"exact"},{"name":"trans-caffeoyl-CoA 3-O-methyltransferase activity","type":"related"}],"termid":"GO:0042409"}


id: GO:0030994
data:
  {"annotated_genes":["SJAG_00667","SJAG_01774"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91604,102075],"is_not":false,"summary":null,"term":"GO:0030994"}]},"cv_name":"biological_process","definition":"Dissolution of the primary septum during cell separation.","definition_xrefs":["PMID:12665550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"part_of","term_name":"septum digestion after cytokinesis","termid":"GO:0000920"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01774":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary cell septum disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hydrolysis of primary cell septum","type":"exact"},{"name":"primary cell septum hydrolysis","type":"exact"},{"name":"primary septum hydrolysis","type":"broad"}],"termid":"GO:0030994","terms_by_termid":{"GO:0030994":null}}


id: GO:0047695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoin = 2 benzaldehyde.","definition_xrefs":["EC:4.1.2.38","RHEA:21460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"benzoin aldolase activity","secondary_identifiers":["MetaCyc:BENZOIN-ALDOLASE-RXN","KEGG_REACTION:R00027"],"synonyms":[{"name":"2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase 2-hydroxy-1,2- activity","type":"related"},{"name":"2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase 2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase (benzaldehyde-forming)","type":"related"},{"name":"2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase 2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase activity","type":"related"},{"name":"benzaldehyde lyase activity","type":"related"},{"name":"diphenylethanone benzaldehyde-lyase activity","type":"related"}],"termid":"GO:0047695"}


id: PBO:0041022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family B member 5, pseudogene","termid":"PBO:0041022"}


id: PBO:0063197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 19","termid":"PBO:0063197"}


id: PBO:0082610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Co-chaperone that stimulates the ATPase activity of Ssa1p; required for a late step of ribosome biogenesis; associated with the cytosolic large ribosomal subunit; contains a J-domain; mutation causes defects in fluid-phase endocytosis","termid":"PBO:0082610"}


id: PBO:0053640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 687","termid":"PBO:0053640"}


id: PBO:0075183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPF divergent transcript","termid":"PBO:0075183"}


id: PBO:0031823
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_modification","termid":"PBO:0031823"}


id: PBO:0002459
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.2.17","termid":"PBO:0002459"}


id: PBO:0078569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif-containing 51C, pseudogene","termid":"PBO:0078569"}


id: PBO:0072864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAM and SH3 domain containing 1","termid":"PBO:0072864"}


id: FYPO:0003447
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of glycosylated protein measured the cell is lower than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of glycosylated protein in cell","synonyms":[{"name":"decreased accumulation of glycosylated protein in cell","type":"related"},{"name":"decreased cellular glycoprotein level","type":"exact"},{"name":"decreased glycosylated protein level during vegetative growth","type":"exact"},{"name":"decreased level of glycosylated protein in cell during mitotic cell cycle","type":"related"},{"name":"decreased level of glycosylated protein in cell during vegetative growth","type":"exact"},{"name":"reduced level of glycosylated protein in cell","type":"exact"}],"termid":"FYPO:0003447"}


id: PBO:0047729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructosamine 3 kinase related protein","termid":"PBO:0047729"}


id: PBO:0052158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 6","termid":"PBO:0052158"}


id: PBO:0034486
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_lipid_metabolism_gene_mRNA_during_cellular_response_to_hypoxia","termid":"PBO:0034486"}


id: GO:0003816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of component C4 to C4a and C4b (Arg-Ala bond), and component C2 to C2a and C2b (Lys-Lys or Arg-Lys bond).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete complement component C1s activity (obsolete GO:0003816)","synonyms":[{"name":"C1 esterase activity","type":"related"},{"name":"C1s esterase activity","type":"related"},{"name":"activated complement C1s","type":"related"},{"name":"complement C1s","type":"related"},{"name":"complement component C1s activity","type":"exact"},{"name":"complement subcomponent C1s","type":"related"}],"termid":"GO:0003816"}


id: MONDO:0044991
data:
  {"annotated_genes":["SJAG_03106"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013662"}]},"cv_name":"mondo","definition":"A disease or disorder that involves the upper digestive tract.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03106":null},"genotype_count":0,"is_obsolete":false,"name":"upper digestive tract disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1290613","SCTID:119291004","MEDGEN:712971"],"synonyms":[{"name":"disease of upper digestive tract","type":"exact"},{"name":"disease or disorder of upper digestive tract","type":"exact"},{"name":"disorder of upper digestive tract","type":"exact"},{"name":"disorder of upper gastrointestinal tract","type":"exact"},{"name":"upper digestive tract disease or disorder","type":"exact"},{"name":"upper gastrointestinal tract disease","type":"exact"}],"termid":"MONDO:0044991","terms_by_termid":{"MONDO:0013662":null},"xrefs":{"Monarch":{"xref_id":"0044991"}}}


id: GO:0042182
data:
  {"annotated_genes":["SJAG_04674","SJAG_02960","SJAG_02106","SJAG_01596","SJAG_04404","SJAG_02988","SJAG_04726"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61677,74599,104729,76233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019243"},{"annotations":[59614,106999,61426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061727"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ketones, a class of organic compounds that contain the carbonyl group, CO, and in which the carbonyl group is bonded only to carbon atoms. The general formula for a ketone is RCOR, where R and R are alkyl or aryl groups.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01596":null,"SJAG_02106":null,"SJAG_02960":null,"SJAG_02988":null,"SJAG_04404":null,"SJAG_04674":null,"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ketone catabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"ketone breakdown","type":"exact"},{"name":"ketone catabolism","type":"exact"},{"name":"ketone degradation","type":"exact"}],"termid":"GO:0042182","terms_by_termid":{"GO:0019243":null,"GO:0061727":null}}


id: MONDO:0030064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary episodic ataxia","termid":"MONDO:0016227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"episodic ataxia, type 9","secondary_identifiers":["DOID:0060965","MEDGEN:1714171","OMIM:618924","UMLS:C5394520"],"synonyms":[{"name":"EA9","type":"exact"},{"name":"EPISODIC ATAXIA, TYPE 9","type":"exact"},{"name":"episodic ataxia, type 9","type":"exact"}],"termid":"MONDO:0030064","xrefs":{"Monarch":{"xref_id":"0030064"}}}


id: MONDO:1010472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent truncus arteriosus that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"persistent truncus arteriosus, non-human animal","termid":"MONDO:1010018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent truncus arteriosus, domestic cat","secondary_identifiers":["OMIA:000795-9685"],"termid":"MONDO:1010472","xrefs":{"Monarch":{"xref_id":"1010472"}}}


id: MONDO:0007837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Johnson neuroectodermal syndrome is characterized by alopecia, anosmia or hyposmia, conductive deafness with malformed ears and microtia and/or atresia of the external auditory canal, and hypogonadotropic hypogonadism.","definition_xrefs":["Orphanet:2316"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Johnson neuroectodermal syndrome","secondary_identifiers":["UMLS:C0796002","MESH:C535882","OMIM:147770","MEDGEN:167092","icd11.foundation:1480597785","SCTID:721584005","GARD:378"],"synonyms":[{"name":"Aadh syndrome","type":"related"},{"name":"Johnson neuroectodermal syndrome","type":"exact"},{"name":"Johnson-McMillin syndrome","type":"exact"},{"name":"alopecia anosmia deafness hypogonadism syndrome","type":"related"},{"name":"alopecia-anosmia-conductive hearing loss-hypogonadism syndrome","type":"exact"},{"name":"alopecia-anosmia-deafness-hypogonadism syndrome","type":"exact"}],"termid":"MONDO:0007837","xrefs":{"Monarch":{"xref_id":"0007837"}}}


id: PBO:0001081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNP pseudouridylase box H/ACA snoRNP complex protein (predicted)","termid":"PBO:0001081"}


id: MONDO:0016815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Leigh syndrome with leukodystrophy (obsolete MONDO:0016815)","secondary_identifiers":["Orphanet:255241"],"synonyms":[{"name":"Leigh disease with leukodystrophy","type":"exact"},{"name":"infantile subacute necrotizing encephalopathy with leukodystrophy","type":"exact"}],"termid":"MONDO:0016815","xrefs":{"Monarch":{"xref_id":"0016815"}}}


id: PBO:0003607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF171 family protein","termid":"PBO:0003607"}


id: GO:0071421
data:
  {"annotated_genes":["SJAG_04867","SJAG_03850","SJAG_01007","SJAG_04096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62181,65042,72549,110635],"is_not":false,"summary":null,"term":"GO:0071421"}]},"cv_name":"biological_process","definition":"A process in which a manganese ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transport","termid":"GO:0006828"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_03850":null,"SJAG_04096":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"manganese ion transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"manganese ion membrane transport","type":"exact"},{"name":"transmembrane manganese transport","type":"exact"}],"termid":"GO:0071421","terms_by_termid":{"GO:0071421":null}}


id: PBO:0017840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 family ATP-dependent 3' to 5' DNA helicase Ino80","termid":"PBO:0017840"}


id: GO:0039692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral genome replication where the template is single-stranded RNA (ssRNA), and which proceeds via a double stranded DNA (dsDNA) intermediate molecule. Viral genomic RNA is first reverse transcribed into dsDNA, which integrates into the host chromosomal DNA, where it is transcribed by host RNA polymerase II.","definition_xrefs":["ISBN:0198506732","VZ:1937","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral RNA genome replication","termid":"GO:0039694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single stranded viral RNA replication via double stranded DNA intermediate","secondary_identifiers":["GO:0045090"],"synonyms":[{"name":"retroviral genome replication","type":"exact"},{"name":"viral ssRNA replication via dsDNA intermediate","type":"related"}],"termid":"GO:0039692"}


id: PBO:0030302
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_activation_of_bipolar_cell_growth","termid":"PBO:0030302"}


id: GO:0010352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lithium ion out of a cell or organelle.","definition_xrefs":["PMID:17270011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lithium ion transmembrane transport","termid":"GO:0090452"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"lithium ion export across the plasma membrane","synonyms":[{"name":"lithium export","type":"exact"},{"name":"lithium ion efflux","type":"related"},{"name":"lithium ion export","type":"related"}],"termid":"GO:0010352"}


id: MONDO:0008693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ablepharon macrostomia syndrome is an extremely rare multiple congenital malformation syndrome characterized by the association of ablepharon, macrostomia, abnormal external ears, syndactyly of the hands and feet, skin findings (such as dry and coarse skin or redundant folds of skin), absent or sparse hair, genital malformations and developmental delay (in 2/3 of cases). Other reported manifestations include malar hypoplasia, absent or hypoplastic nipples, umbilical abnormalities and growth retardation. It is a mainly sporadic disorder, although a few familial cases having been reported, and it displays significant clinical overlap with Fraser syndrome.","definition_xrefs":["Orphanet:920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ablepharon macrostomia syndrome","secondary_identifiers":["NORD:704","MESH:C535557","DOID:0060550","UMLS:C1860224","SCTID:718575002","OMIM:200110","GARD:3","MEDGEN:395439"],"synonyms":[{"name":"AMS","type":"exact"},{"name":"Ablepharon-Macrostomia Syndrome","type":"exact"},{"name":"ablepharon-macrostomia syndrome","type":"exact"},{"name":"congenital ablepharon, absent eyelashes/eyebrows, macrostomia, auricular, nasal, genital and other systemic anomalies","type":"related"}],"termid":"MONDO:0008693","xrefs":{"Monarch":{"xref_id":"0008693"}}}


id: MONDO:0045040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disease characteristic","termid":"MONDO:0021125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"locational disease characteristic","termid":"MONDO:0045040","xrefs":{"Monarch":{"xref_id":"0045040"}}}


id: GO:0018252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of the green fluorescent protein chromophore cross-link from the alpha-carboxyl carbon of residue n, a serine, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with a dehydrogenation of residue n+1 to form a double bond between the alpha and beta carbons.","definition_xrefs":["RESID:AA0184"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-seryl-5-imidazolinone glycine (obsolete GO:0018252)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via L-seryl-5-imidazolinone glycine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via L-seryl-5-imidazolinone glycine","type":"exact"}],"termid":"GO:0018252"}


id: GO:0055054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: fructose + H+ = fructose + H+.","definition_xrefs":["GOC:ct"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose transmembrane transporter activity","termid":"GO:0005353"},{"relation_name":"is_a","term_name":"hexose:proton symporter activity","termid":"GO:0009679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"fructose:proton symporter activity","synonyms":[{"name":"fructose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0055054"}


id: PBO:0073035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCTR antisense RNA 1","termid":"PBO:0073035"}


id: FYPO:0008128
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is decreased relative to normal in a medium containing low glucose. This term refers to situations where glucose is below 0.2%.","definition_xrefs":["PMID:37859837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002058","FYPO:0002057","FYPO:0005447","FYPO:0000139","FYPO:0002060"],"is_obsolete":false,"name":"decreased vegetative cell population growth on low glucose","termid":"FYPO:0008128"}


id: PBO:0062139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 6","termid":"PBO:0062139"}


id: GO:0034082
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A polyketide synthase complex that consists of several different polypeptide chains, each of which catalyzes a single reaction.","definition_xrefs":["GOC:cb","GOC:mah","PMID:12636085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide synthase complex","termid":"GO:0034081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"type II polyketide synthase complex","synonyms":[{"name":"type II PKS","type":"exact"},{"name":"type II PKS complex","type":"exact"},{"name":"type II polyketide synthase","type":"exact"}],"termid":"GO:0034082"}


id: GO:0000967
data:
  {"annotated_genes":["SJAG_04006","SJAG_04224","SJAG_04767","SJAG_02250","SJAG_04524","SJAG_00772"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97299],"is_not":false,"summary":null,"term":"GO:0000967"},{"annotations":[110976,72104,79739,74671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000472"},{"annotations":[109413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000465"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 5' end of an rRNA molecule.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA 5'-end processing","termid":"GO:0000966"},{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00772":null,"SJAG_02250":null,"SJAG_04006":null,"SJAG_04224":null,"SJAG_04524":null,"SJAG_04767":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0042254","GO:0044085"],"is_obsolete":false,"name":"rRNA 5'-end processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"rRNA 5' end processing","type":"exact"}],"termid":"GO:0000967","terms_by_termid":{"GO:0000465":null,"GO:0000472":null,"GO:0000967":null}}


id: PBO:0039498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A21, pseudogene","termid":"PBO:0039498"}


id: GO:1903740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphatidate phosphatase activity.","definition_xrefs":["PMID:25359770","GOC:rn","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidate phosphatase activity (obsolete GO:1903740)","synonyms":[{"name":"activation of 3-sn-phosphatidate phosphohydrolase activity","type":"narrow"},{"name":"activation of acid phosphatidyl phosphatase activity","type":"narrow"},{"name":"activation of phosphatic acid phosphatase activity","type":"narrow"},{"name":"activation of phosphatic acid phosphohydrolase activity","type":"narrow"},{"name":"activation of phosphatidate phosphatase activity","type":"narrow"},{"name":"activation of phosphatidate phosphohydrolase activity","type":"narrow"},{"name":"activation of phosphatidic acid phosphatase activity","type":"narrow"},{"name":"positive regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"positive regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"positive regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"positive regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"positive regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"positive regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"up regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"up regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"up regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"up regulation of phosphatidate phosphatase activity","type":"exact"},{"name":"up regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"up-regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up-regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"up-regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"up-regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"up-regulation of phosphatidate phosphatase activity","type":"exact"},{"name":"up-regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up-regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"upregulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"upregulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"upregulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"upregulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"upregulation of phosphatidate phosphatase activity","type":"exact"},{"name":"upregulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"upregulation of phosphatidic acid phosphatase activity","type":"exact"}],"termid":"GO:1903740"}


id: PATO:0001804
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality inhering in a bearer by virtue of the bearer's being covered or partially covered with scales.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scaly","synonyms":[{"name":"squamous","type":"related"}],"termid":"PATO:0001804"}


id: GO:0016678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a heme group acts as a hydrogen or electron donor and reduces an acceptor other than a nitrogenous group or oxygen.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on heme group of donors, other acceptors (obsolete GO:0016678)","synonyms":[{"name":"oxidoreductase activity, acting on haem group of donors, other acceptors","type":"exact"},{"name":"oxidoreductase activity, acting on heme group of donors, other acceptors","type":"exact"}],"termid":"GO:0016678"}


id: PBO:0071559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 24","termid":"PBO:0071559"}


id: GO:0044204
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dynamic, proteinaceous framework within the nucleus of host eukaryotic cells, composed of proteins and RNA, that provides structural support for chromatin organization, gene regulation, and nuclear processes.","definition_xrefs":["GOC:jl","GOC:rynl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear part","termid":"GO:0044094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nuclear matrix","termid":"GO:0044204"}


id: PBO:0089243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated WD repeat protein Nan1/Utp17","termid":"PBO:0089243"}


id: MONDO:0003423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, well-circumscribed glandular neoplasm that arises from the middle ear and may exhibit neuroendocrine differentiation. It usually presents with conductive hearing loss.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"benign neoplasm of middle ear","termid":"MONDO:0021482"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"middle ear adenoma","secondary_identifiers":["DOID:5387","NCIT:C6834","SCTID:734078009"],"synonyms":[{"name":"adenoma of middle ear","type":"related"},{"name":"adenoma of the middle ear","type":"exact"},{"name":"middle ear adenoma","type":"exact"}],"termid":"MONDO:0003423","xrefs":{"Monarch":{"xref_id":"0003423"}}}


id: PBO:0041029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain PHD finger transcription factor","termid":"PBO:0041029"}


id: GO:1902821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1-undecene.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","PMID:16013377","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene biosynthetic process","termid":"GO:0043450"},{"relation_name":"is_a","term_name":"1-undecene metabolic process","termid":"GO:1902820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1-undecene biosynthetic process","synonyms":[{"name":"1-undecene anabolism","type":"exact"},{"name":"1-undecene biosynthesis","type":"exact"},{"name":"1-undecene formation","type":"exact"},{"name":"1-undecene synthesis","type":"exact"}],"termid":"GO:1902821"}


id: PBO:0088218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific protein in duplicated region/dubious, longer version of SJAG_01091","termid":"PBO:0088218"}


id: PBO:0004787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain protein (predicted)","termid":"PBO:0004787"}


id: PBO:0062257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily D member 13","termid":"PBO:0062257"}


id: PBO:0063317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoenolpyruvate carboxykinase 1","termid":"PBO:0063317"}


id: PBO:0066179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 4B","termid":"PBO:0066179"}


id: FYPO:0007181
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division is normal (i.e. indistinguishable from wild type) during anaphase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell division site","termid":"FYPO:0002442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to cell division site during mitotic anaphase","synonyms":[{"name":"normal protein localisation to cell division site during mitotic anaphase","type":"exact"},{"name":"normal protein localization to cell division site during anaphase of mitotic cell cycle","type":"exact"},{"name":"normal protein recruitment to cell division site during mitotic anaphase","type":"related"}],"termid":"FYPO:0007181"}


id: PBO:0068304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 8","termid":"PBO:0068304"}


id: PBO:0091292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase Plb3","termid":"PBO:0091292"}


id: GO:0004089
data:
  {"annotated_genes":["SJAG_06611"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79333],"is_not":false,"summary":null,"term":"GO:0004089"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogencarbonate + H+ = CO2 + H2O.","definition_xrefs":["EC:4.2.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"carbonate dehydratase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1237045","Reactome:R-HSA-1475435","Reactome:R-HSA-1237059","Reactome:R-HSA-1475025","Reactome:R-HSA-1475017","MetaCyc:RXN0-5224","Reactome:R-HSA-1237081","Reactome:R-HSA-1475022","Reactome:R-HSA-1475436","RHEA:10748","Reactome:R-HSA-1475026","Reactome:R-HSA-1475032","Reactome:R-HSA-1237047","Reactome:R-HSA-1475028"],"synonyms":[{"name":"anhydrase activity","type":"related"},{"name":"carbonate anhydrase activity","type":"related"},{"name":"carbonate hydro-lyase (carbon-dioxide-forming)","type":"related"},{"name":"carbonate hydro-lyase activity","type":"related"},{"name":"carbonic acid anhydrase activity","type":"related"},{"name":"carbonic anhydrase A","type":"related"},{"name":"carbonic anhydrase activity","type":"exact"},{"name":"carbonic dehydratase activity","type":"related"},{"name":"carboxyanhydrase activity","type":"related"}],"termid":"GO:0004089","terms_by_termid":{"GO:0004089":null}}


id: MONDO:0011778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple epiphyseal dysplasia, Al-Gazali type is a skeletal dysplasia characterized by multiple epiphyseal dysplasia, macrocephaly and facial dysmorphism.","definition_xrefs":["Orphanet:166024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple epiphyseal dysplasia","termid":"MONDO:0016648"},{"relation_name":"is_a","term_name":"KIF7-related ciliopathy","termid":"MONDO:0800463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"multiple epiphyseal dysplasia, Al-Gazali type","secondary_identifiers":["GARD:17014","ICD10CM:Q77.3","MEDGEN:335505","MESH:C564621","OMIM:607131","SCTID:719688002","UMLS:C1846722","icd11.foundation:1359939784"],"synonyms":[{"name":"AGBK","type":"related"},{"name":"AL-Gazali-BAKALINOVA syndrome","type":"related"},{"name":"Al-Gazali-Bakalinova syndrome","type":"related"},{"name":"Mmedf","type":"related"},{"name":"macrocephaly with multiple epiphyseal dysplasia and distinctive facies","type":"related"},{"name":"multiple epiphyseal dysplasia-macrocephaly-distinctive facies syndrome","type":"exact"}],"termid":"MONDO:0011778","xrefs":{"Monarch":{"xref_id":"0011778"}}}


id: GO:0036119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a platelet-derived growth factor stimulus.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth factor","termid":"GO:0070848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to platelet-derived growth factor","synonyms":[{"name":"response to PDGF stimulus","type":"exact"},{"name":"response to platelet-derived growth factor stimulus","type":"exact"}],"termid":"GO:0036119"}


id: PBO:0042780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 104","termid":"PBO:0042780"}


id: PBO:0072889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strawberry notch homolog 1","termid":"PBO:0072889"}


id: MOD:01717
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino- or imino-hydrogen with a Proteome Sciences TMT6plex reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent N-acylated residue","termid":"MOD:01706"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex reporter+balance reagent N-acylated residue","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01717"}


id: PBO:0056512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBNL1 antisense RNA 1","termid":"PBO:0056512"}


id: MONDO:0019597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. 46,XY disorder of sex development due to isolated 17,20-lyase deficiency is a rare disorder of sex development due to reduced 17,20-lyase activity that affects individuals with 46,XY karyotype and is characterized by ambiguous external genitalia, including micropenis, perineal hypospadias, bifid scrotum, cryptorchidism, and a blind vaginal pouch. Blood pressure and electrolytes are normal whilst hormonal investigations show normal basal and stimulated levels of cortisol, and low basal and stimulated androgen levels.","definition_xrefs":["Orphanet:90796"],"gene_count":0,"genotype_count":0,"name":"obsolete 46,XY disorder of sex development due to isolated 17,20-lyase deficiency (obsolete MONDO:0019597)","termid":"MONDO:0019597","xrefs":{"Monarch":{"xref_id":"0019597"}}}


id: PBO:0082718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Paf1 complex; which associates with RNA polymerase II and is involved in histone methylation; plays a role in regulating Ty1 transposition; involved in transcription elongation as demonstrated by the G-less-based run-on (GLRO) assay","termid":"PBO:0082718"}


id: PBO:0061059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrilase family member 2","termid":"PBO:0061059"}


id: GO:0031450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of slow-twitch skeletal muscle contraction.","definition_xrefs":["GOC:mah","GOC:dph","GOC:ef","GOC:mtg_muscle","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of slow-twitch skeletal muscle fiber contraction","termid":"GO:0031449"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle contraction","termid":"GO:0045988"},{"relation_name":"negatively_regulates","term_name":"slow-twitch skeletal muscle fiber contraction","termid":"GO:0031444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of slow-twitch skeletal muscle fiber contraction","synonyms":[{"name":"down regulation of slow-twitch skeletal muscle contraction","type":"exact"},{"name":"down-regulation of slow-twitch skeletal muscle contraction","type":"exact"},{"name":"downregulation of slow-twitch skeletal muscle contraction","type":"exact"},{"name":"inhibition of slow-twitch skeletal muscle contraction","type":"narrow"},{"name":"negative regulation of slow-twitch skeletal muscle contraction","type":"exact"}],"termid":"GO:0031450"}


id: PBO:0064910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 regulatory subunit 1 like (pseudogene)","termid":"PBO:0064910"}


id: PBO:0046404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of polycomb homolog 1","termid":"PBO:0046404"}


id: GO:0060267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate frequency or extent of a phase of elevated metabolic activity, during which oxygen consumption increases; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of respiratory burst","termid":"GO:0060263"},{"relation_name":"positively_regulates","term_name":"respiratory burst","termid":"GO:0045730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of respiratory burst","termid":"GO:0060267"}


id: GO:1901448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to butan-1-ol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to alcohol","termid":"GO:1901419"},{"relation_name":"regulates","term_name":"response to butan-1-ol","termid":"GO:1901422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to butan-1-ol","termid":"GO:1901448"}


id: PBO:0051023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein 3","termid":"PBO:0051023"}


id: PBO:0042799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 295","termid":"PBO:0042799"}


id: GO:0052484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the ethylene-mediated defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont ethylene-mediated defense response (obsolete GO:0052484)","synonyms":[{"name":"negative regulation by organism of symbiont ethylene-mediated defense response","type":"exact"},{"name":"suppression by organism of symbiont ethylene-mediated defense response","type":"exact"}],"termid":"GO:0052484"}


id: MONDO:0009135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital dyserythropoietic anemia type 1","termid":"MONDO:0020337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"anemia, congenital dyserythropoietic, type 1a","secondary_identifiers":["DOID:0111398","MEDGEN:1807106","OMIM:224120","UMLS:C5574667"],"synonyms":[{"name":"CDA Ia","type":"related"},{"name":"CDAN1A","type":"related"},{"name":"anemia, congenital dyserythropoietic, type 1","type":"related"},{"name":"anemia, congenital dyserythropoietic, type 1a","type":"exact"},{"name":"anemia, congenital dyserythropoietic, type Ia","type":"exact"},{"name":"dyserythropoietic Anemia, congenital, type Ia","type":"related"}],"termid":"MONDO:0009135","xrefs":{"Monarch":{"xref_id":"0009135"}}}


id: PBO:0056280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 2B member 2","termid":"PBO:0056280"}


id: PBO:0041919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonyl reductase 3","termid":"PBO:0041919"}


id: FYPO:0006206
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is decreased during a cellular response to phosphate starvation.","definition_xrefs":["PomBase:mah","PMID:19933844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to chromatin during cellular response to phosphate starvation","synonyms":[{"name":"decreased protein localisation to chromatin during cellular response to phosphate starvation","type":"exact"},{"name":"decreased protein localization to chromatin during cellular response to phosphate ion starvation","type":"exact"},{"name":"decreased protein localization to chromatin during cellular response to phosphate starvation during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin during cellular response to phosphate starvation during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin during cellular response to phosphate starvation","type":"exact"}],"termid":"FYPO:0006206"}


id: PBO:0090212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial lipoic acid synthetase Lip5","termid":"PBO:0090212"}


id: PBO:0000469
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Sre1","termid":"PBO:0000469"}


id: GO:0170036
data:
  {"annotated_genes":["SJAG_03650","SJAG_01924","SJAG_04984","SJAG_03577","SJAG_00543","SJAG_04588","SJAG_04593","SJAG_00626"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78517,81274],"is_not":false,"summary":null,"term":"GO:0170036"},{"annotations":[71827,100137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904983"},{"annotations":[102166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0170046"},{"annotations":[109866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160256"},{"annotations":[78698,63729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006850"},{"annotations":[92489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140300"}]},"cv_name":"biological_process","definition":"The directed movement of substances from the cytosol into the mitochondrion.","definition_xrefs":["GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00543":null,"SJAG_00626":null,"SJAG_01924":null,"SJAG_03577":null,"SJAG_03650":null,"SJAG_04588":null,"SJAG_04593":null,"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"import into the mitochondrion","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0170036","terms_by_termid":{"GO:0006850":null,"GO:0140300":null,"GO:0160256":null,"GO:0170036":null,"GO:0170046":null,"GO:1904983":null}}


id: MONDO:1010074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Factor XII deficiency that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"factor XII deficiency, non-human animal","secondary_identifiers":["OMIA:000364"],"termid":"MONDO:1010074","xrefs":{"Monarch":{"xref_id":"1010074"}}}


id: PBO:0026644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_G2_DNA_damage_checkpoint_during_cellular_response_to_UV","termid":"PBO:0026644"}


id: GO:0033487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pelargonidin 3-O-glucoside, a basic anthocyanin responsible for red to magenta coloration of flowers and fruits.","definition_xrefs":["MetaCyc:PWY-5125","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"},{"relation_name":"is_a","term_name":"beta-glucoside biosynthetic process","termid":"GO:1901806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pelargonidin 3-O-glucoside biosynthetic process","synonyms":[{"name":"pelargonidin 3-O-glucoside anabolism","type":"exact"},{"name":"pelargonidin 3-O-glucoside biosynthesis","type":"exact"},{"name":"pelargonidin 3-O-glucoside formation","type":"exact"},{"name":"pelargonidin 3-O-glucoside synthesis","type":"exact"}],"termid":"GO:0033487"}


id: GO:0099190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of spectrin-associated cytoskeleton and associated proteins in the postsynapse.","definition_xrefs":["GOC:dos","PMID:28576936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic cytoskeleton organization","termid":"GO:0099188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010"],"is_obsolete":false,"name":"postsynaptic spectrin-associated cytoskeleton organization","termid":"GO:0099190"}


id: GO:0046687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chromate stimulus.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to chromate","synonyms":[{"name":"chromate sensitivity/resistance","type":"related"}],"termid":"GO:0046687"}


id: GO:0003005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The menstrual cycle process in which one central cavity separating the oocyte/cumulus complex from mural granulosa and theca cells is formed as part of the scattered antral spaces stage of oogenesis.","definition_xrefs":["GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"follicular fluid formation in ovarian follicle antrum","termid":"GO:0001548"},{"relation_name":"part_of","term_name":"scattered antral spaces stage","termid":"GO:0048163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicular fluid formation in ovarian follicle antrum involved in scattered antral spaces stage","synonyms":[{"name":"follicular fluid formation in ovarian follicle antrum during scattered antral spaces stage","type":"related"}],"termid":"GO:0003005"}


id: FYPO:0007236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at early replication origins (i.e. origins that normally fire early in S phase) begins later than normal.","definition_xrefs":["PomBase:mah","PMID:22279046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein localization to chromatin at replication origin","termid":"FYPO:0006734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of protein localization to chromatin at early replication origin","synonyms":[{"name":"delayed onset of protein localisation to chromatin at early replication origin","type":"exact"},{"name":"delayed onset of protein localization to chromatin at early origin","type":"exact"},{"name":"delayed onset of protein localization to chromatin at early replication origins during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to chromatin at early replication origins during vegetative growth","type":"exact"},{"name":"delayed protein localization to chromatin at early replication origin","type":"exact"}],"termid":"FYPO:0007236"}


id: PBO:0078764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase subunit 11-2 pseudogene 7","termid":"PBO:0078764"}


id: PBO:0083146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF EAF5/YEL018W","termid":"PBO:0083146"}


id: PBO:0110121
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_file_curator","termid":"PBO:0110121"}


id: PBO:0078830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon CGG) 1-1","termid":"PBO:0078830"}


id: PBO:0034248
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_syntenic_orthology_relationship_with","termid":"PBO:0034248"}


id: MOD:01255
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to S-(2-sulfanylethyl)cysteine.","definition_xrefs":["PubMed:11507762","Unimod:200#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,2-ethanedithiol modified residue","termid":"MOD:00553"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(2-sulfanylethyl)cysteine (Ser)","synonyms":[{"name":"EDT","type":"related"},{"name":"Ethanedithiol","type":"related"},{"name":"S-(2-mercaptoethyl)cysteine","type":"exact"}],"termid":"MOD:01255"}


id: GO:0004935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with epinephrine or norepinephrine and transmitting the signal across the membrane by activating the alpha-subunit of an associated heterotrimeric G-protein complex.","definition_xrefs":["GOC:mah","IUPHAR_GPCR:1274","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled amine receptor activity","termid":"GO:0008227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"adrenergic receptor activity","secondary_identifiers":["Wikipedia:Adrenergic_receptor"],"synonyms":[{"name":"adrenoceptor activity","type":"exact"}],"termid":"GO:0004935"}


id: PBO:0000928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp1","termid":"PBO:0000928"}


id: MONDO:0007964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Clinically atypical nevi (usually exceeding 5 mm in diameter and having variable pigmentation and ill defined borders) with an increased risk for development of non-familial cutaneous malignant melanoma. Biopsies show melanocytic dysplasia. Nevi are clinically and histologically identical to the precursor lesions for melanoma in the B-K mole syndrome. (Stedman, 25th ed)","definition_xrefs":["MESH:D004416"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"excluded_subClassOf","term_name":"familial melanoma","termid":"MONDO:0018961"},{"relation_name":"excluded_subClassOf","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"melanoma, cutaneous malignant, susceptibility to, 2","secondary_identifiers":["NCIT:C7584","MEDGEN:331891","UMLS:C1835044","OMIM:155601","DOID:10041"],"synonyms":[{"name":"Atypical Mole syndrome","type":"exact"},{"name":"B-K Mole syndrome","type":"exact"},{"name":"CMM2","type":"related"},{"name":"dysplastic nevus syndrome","type":"exact"},{"name":"familial dysplastic nevi","type":"exact"},{"name":"melanoma, cutaneous malignant, 2","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, 2","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, type 2","type":"exact"},{"name":"susceptibility to cutaneous malignant melanoma 2","type":"related"}],"termid":"MONDO:0007964","xrefs":{"Monarch":{"xref_id":"0007964"}}}


id: PBO:0055894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 14B","termid":"PBO:0055894"}


id: FYPO:0004446
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of endocytosis is decreased during the meiotic cell cycle. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis","termid":"FYPO:0003886"},{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased endocytosis during meiotic cell cycle","synonyms":[{"name":"reduced actin-mediated endocytosis during meiotic cell cycle","type":"exact"},{"name":"reduced endocytosis during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004446"}


id: PBO:0045502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSN1 component of MIS12 kinetochore complex","termid":"PBO:0045502"}


id: FYPO:0003156
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the monopolar growth of a cell is normal (i.e. indistinguishable from wild type in timing, extent, rate, etc.) in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah","PMID:24146635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell growth","termid":"FYPO:0002085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal monopolar cell growth","synonyms":[{"name":"normal monopolar vegetative cell growth","type":"exact"}],"termid":"FYPO:0003156"}


id: SO:0002318
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that alters the sequence of a gene product.","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functional_effect_variant","termid":"SO:0001536"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"altered_gene_product_sequence","synonyms":[{"name":"altered gene product structure","type":"exact"}],"termid":"SO:0002318"}


id: PBO:0057700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1288","termid":"PBO:0057700"}


id: PBO:0070749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 5","termid":"PBO:0070749"}


id: MONDO:0002984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare cutaneous lesion composed of eosinophilic histiocytes, which are often multinucleated. The lesions are yellow-brown papules affecting any part of the body. Patients are usually adult men. The prognosis is excellent. -- 2003","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histiocytosis","termid":"MONDO:0002637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"reticulohistiocytic granuloma","secondary_identifiers":["MEDGEN:48431","NCIT:C3356","DOID:4394","UMLS:C0035290","MESH:D015616","SCTID:404162004","ICD9:277.89"],"synonyms":[{"name":"Reticulohistiocytoma","type":"exact"},{"name":"reticulohistiocytic granuloma (morphologic abnormality)","type":"exact"},{"name":"solitary Reticulohistiocytoma","type":"exact"},{"name":"solitary histiocytoma","type":"related"},{"name":"solitary reticulohistiocytoma","type":"exact"},{"name":"solitary reticulohistiocytosis","type":"related"}],"termid":"MONDO:0002984","xrefs":{"Monarch":{"xref_id":"0002984"}}}


id: PBO:0067135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 183, pseudogene","termid":"PBO:0067135"}


id: PBO:0026984
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_cellular_response_to_rapamycin","termid":"PBO:0026984"}


id: PBO:0046330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ecto-NOX disulfide-thiol exchanger 1","termid":"PBO:0046330"}


id: GO:0009480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete class IIb cytochrome c (obsolete GO:0009480)","synonyms":[{"name":"class IIb cytochrome c","type":"exact"}],"termid":"GO:0009480"}


id: PR:Q9UTT1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubp15 gene.","definition_xrefs":["UniProtKB:Q9UTT1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase 21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.02c","synonyms":[{"name":"Spom972h-ubp15","type":"exact"},{"name":"deubiquitinating enzyme 21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTT1"}


id: MOD:00823
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-methionine residue and an L-cysteine residue by a thioester bond to form S-(L-methionyl)-L-cysteine.","definition_xrefs":["PubMed:12146974","RESID:AA0413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-methionine residue","termid":"MOD:02052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(L-methionyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S)-2-amino-4-(methylsulfanyl)butanoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"CROSSLNK Methionyl cysteine thioester (Cys-Met)","type":"exact"},{"name":"S-(2-amino-4-methylthiobutanoyl)cysteine","type":"exact"},{"name":"S-(L-methionyl)-L-cysteine","type":"exact"},{"name":"XLNK1MetSCys","type":"exact"},{"name":"methionine cysteine thioester","type":"exact"}],"termid":"MOD:00823"}


id: PBO:0081320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 106","termid":"PBO:0081320"}


id: GO:0009522
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).","definition_xrefs":["ISBN:0140514031","GOC:ds","GOC:mah","PMID:9821949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosystem","termid":"GO:0009521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"photosystem I","termid":"GO:0009522"}


id: MONDO:0014776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type III","termid":"MONDO:0019793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia type 42","secondary_identifiers":["DOID:0111742","UMLS:C4225205","NCIT:C171269","GARD:17811","OMIM:616795","MEDGEN:902592","EFO:0009059","Orphanet:458803"],"synonyms":[{"name":"SCA42","type":"exact"},{"name":"spinocerebellar ataxia 42","type":"exact"},{"name":"spinocerebellar ataxia type 42","type":"exact"}],"termid":"MONDO:0014776","xrefs":{"Monarch":{"xref_id":"0014776"}}}


id: MONDO:0000150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spondylometaphyseal dysplasia (obsolete MONDO:0000150)","termid":"MONDO:0000150","xrefs":{"Monarch":{"xref_id":"0000150"}}}


id: MONDO:1010282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Azoospermia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"azoospermia, non-human animal","secondary_identifiers":["OMIA:002500"],"termid":"MONDO:1010282","xrefs":{"Monarch":{"xref_id":"1010282"}}}


id: PBO:0071770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P2 pseudogene 3","termid":"PBO:0071770"}


id: GO:0035522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of the ubiquitin group from a monoubiquitinated histone H2A protein.","definition_xrefs":["PMID:20436459","GOC:bf","PMID:18226187"],"gene_count":0,"genotype_count":0,"name":"obsolete monoubiquitinated histone H2A deubiquitination (obsolete GO:0035522)","synonyms":[{"name":"monoubiquitinated histone H2A deubiquitinylation","type":"exact"},{"name":"monoubiquitinated histone H2A deubiquitylation","type":"exact"}],"termid":"GO:0035522"}


id: PBO:0074145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member C1","termid":"PBO:0074145"}


id: MONDO:0022675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cataract skeletal anomalies","termid":"MONDO:0022675","xrefs":{"Monarch":{"xref_id":"0022675"}}}


id: GO:0048853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the forebrain are generated and organized. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions).","definition_xrefs":["GOC:dph","GOC:jid","GOC:dgh","GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"forebrain development","termid":"GO:0030900"},{"relation_name":"part_of","term_name":"brain morphogenesis","termid":"GO:0048854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain morphogenesis","synonyms":[{"name":"prosencephalon morphogenesis","type":"exact"}],"termid":"GO:0048853"}


id: FYPO:0001037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population growth phenotype in which vegetative cells grow normally (i.e. indistinguishably from wild type) during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal growth during cellular response to osmotic stress","termid":"FYPO:0001021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0002060","FYPO:0000003","FYPO:0002058","FYPO:0000257"],"is_obsolete":false,"name":"normal growth during cellular response to salt stress","synonyms":[{"name":"normal cell population growth during cellular response to ionic osmotic stress","type":"exact"},{"name":"normal cell population growth during cellular response to salt stress","type":"exact"},{"name":"normal cellular response to salt stress","type":"related"},{"name":"normal cellular salinity response","type":"related"},{"name":"normal vegetative cell population growth during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0001037"}


id: FYECO:0000128
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition where the pH of the medium or assay buffer is significantly different than the standard pombe growth medium with a pH of ~5.6.","definition_xrefs":["PMID:10467002"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000128 pH (obsolete FYECO:0000128)","termid":"FYECO:0000128"}


id: PBO:0083869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein containing five copies of the WD40 motif; controls cell cycle function, sulfur metabolism, and methionine biosynthesis as part of the ubiquitin ligase complex; interacts with and regulates Met4p, localizes within the nucleus; dissociation of Met30p from SCF complex in response to cadmium stress is regulated by Cdc48p","termid":"PBO:0083869"}


id: MONDO:0015687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic leukemia","termid":"MONDO:0001014"},{"relation_name":"is_a","term_name":"myeloproliferative neoplasm","termid":"MONDO:0020076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"chronic eosinophilic leukemia","secondary_identifiers":["MESH:C580364","NCIT:C4563","Orphanet:168940","ONCOTREE:CELNOS","SCTID:188733003","MedDRA:10065854","ICDO:9964/3","GARD:20104","DOID:0080367","UMLS:C0346421","MEDGEN:91106"],"synonyms":[{"name":"CEL","type":"exact"},{"name":"CEL/hypereosinophilic syndrome","type":"exact"},{"name":"CELNOS","type":"related"},{"name":"chronic eosinophilic leukemia","type":"exact"},{"name":"chronic eosinophilic leukemia/hypereosinophilic syndrome","type":"exact"},{"name":"eosinophilic leukaemia","type":"exact"},{"name":"eosinophilic leukemia","type":"exact"}],"termid":"MONDO:0015687","xrefs":{"Monarch":{"xref_id":"0015687"}}}


id: GO:1900621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Calcium-mediated signaling that results in regulation of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling (obsolete GO:1900621)","synonyms":[{"name":"regulation of gene-specific transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"regulation of global transcription from Pol II promoter by calcium-mediated signaling","type":"related"},{"name":"regulation of transcription from Pol II promoter by calcium-mediated signaling","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter, global by calcium-mediated signaling","type":"related"}],"termid":"GO:1900621"}


id: GO:0030374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A transcription coactivator activity that activates or increases the transcription of specific gene sets via binding to a DNA-bound nuclear receptor, either on its own or as part of a complex. Coactivators often act by altering chromatin structure and modifications. For example, one class of transcription coregulators modifies chromatin structure through covalent modification of histones. A second class remodels the conformation of chromatin in an ATP-dependent fashion. A third class modulates interactions of DNA-bound DNA-binding transcription factors with other transcription coregulators. A fourth class of coactivator activity is the bridging of a DNA-binding transcription factor to the general (basal) transcription machinery. The Mediator complex, which bridges sequence-specific DNA binding transcription factors and RNA polymerase, is also a transcription coactivator.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear receptor coactivator activity (obsolete GO:0030374)","synonyms":[{"name":"ligand-activated RNA polymerase II transcription factor binding transcription factor activity","type":"exact"},{"name":"ligand-dependent nuclear receptor transcription co-activator activity","type":"exact"},{"name":"ligand-dependent nuclear receptor transcription coactivator activity","type":"exact"},{"name":"nuclear receptor transcription coactivator activity","type":"exact"},{"name":"transcription factor activity, ligand-activated RNA polymerase II transcription factor binding","type":"exact"}],"termid":"GO:0030374"}


id: PBO:0018250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brix domain ribosome biogenesis protein Rpf2","termid":"PBO:0018250"}


id: GO:0044316
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized axon terminus which is produced by retinal cone cells. Pedicles are large, conical, flat end-feet (8-10 micrometers diameter) of the retinal cone axon that lie more or less side by side on the same plane at the outer edge of the outer plexiform layer (OPL).","definition_xrefs":["PMID:10939333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon terminus","termid":"GO:0043679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cone cell pedicle","synonyms":[{"name":"cone pedicle","type":"exact"}],"termid":"GO:0044316"}


id: PBO:0068298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 5","termid":"PBO:0068298"}


id: MONDO:0018557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare genetic autonomic nervous system disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic autonomic nervous system disorder (obsolete MONDO:0018557)","secondary_identifiers":["Orphanet:434786"],"synonyms":[{"name":"rare genetic autonomic nervous system disease","type":"exact"}],"termid":"MONDO:0018557","xrefs":{"Monarch":{"xref_id":"0018557"}}}


id: SO:0001663
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A core RNA polymerase II promoter element with consensus (G/A)T(T/G/A)(T/A)(G/T)(T/G)(T/G).","definition_xrefs":["PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BREd_motif","synonyms":[{"name":"BREd","type":"exact"},{"name":"BREd motif","type":"related"}],"termid":"SO:0001663"}


id: PBO:0041940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 8","termid":"PBO:0041940"}


id: PBO:0084907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondria protein of unknown function; interacts genetically with TOR1 to regulate chronological lifespan, and the response to both heat shock and oxidative stress; involved in maintaining the integrity of the mitochondrial network; negative regulator of mitophagy flux; non-tagged protein is detected in purified mitochondria in high-throughput studies; null mutant is viable and displays an elevated frequency of mitochondrial genome loss; similar to murine NOR1","termid":"PBO:0084907"}


id: PBO:0002371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WIP (Wiskott-Aldrich syndrome protein-Interacting Protein) homolog (predicted)","termid":"PBO:0002371"}


id: PBO:0048615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, IMAP family member 7","termid":"PBO:0048615"}


id: GO:0003855
data:
  {"annotated_genes":["SJAG_00337"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60349],"is_not":false,"summary":null,"term":"GO:0003855"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-dehydroquinate = 3-dehydroshikimate + H2O.","definition_xrefs":["EC:4.2.1.10","RHEA:21096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00337":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"3-dehydroquinate dehydratase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["KEGG_REACTION:R03084","MetaCyc:3-DEHYDROQUINATE-DEHYDRATASE-RXN"],"synonyms":[{"name":"3-dehydroquinase activity","type":"related"},{"name":"3-dehydroquinate hydro-lyase (3-dehydroshikimate-forming)","type":"related"},{"name":"3-dehydroquinate hydro-lyase activity","type":"related"},{"name":"3-dehydroquinate hydrolase activity","type":"related"},{"name":"5-dehydroquinase activity","type":"related"},{"name":"5-dehydroquinate dehydratase activity","type":"related"},{"name":"5-dehydroquinate hydro-lyase activity","type":"related"},{"name":"DHQase","type":"related"},{"name":"dehydroquinase activity","type":"related"},{"name":"dehydroquinate dehydratase activity","type":"related"}],"termid":"GO:0003855","terms_by_termid":{"GO:0003855":null}}


id: MONDO:0016044
data:
  {"annotated_genes":["SJAG_03843"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013378"}]},"cv_name":"mondo","definition":"Cleft lip and palate is a fissure type embryopathy extending across the upper lip, nasal base, alveolar ridge and the hard and soft palate.","definition_xrefs":["Orphanet:199306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orofacial cleft","termid":"MONDO:0000358"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03843":null},"genotype_count":0,"is_obsolete":false,"name":"cleft lip/palate","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:749.25","GARD:17092","ICD10CM:Q35-Q37","UMLS:C0158646","SCTID:66948001","MEDGEN:57640","MedDRA:10009260","ICD9:749.20"],"synonyms":[{"name":"FLP","type":"exact"},{"name":"alveolar cleft lip and palate","type":"exact"},{"name":"cleft lip and palate","type":"exact"},{"name":"cleft lip-alveolus-palate syndrome","type":"exact"}],"termid":"MONDO:0016044","terms_by_termid":{"MONDO:0013378":null},"xrefs":{"Monarch":{"xref_id":"0016044"}}}


id: PBO:0036148
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_dimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036148"}


id: FYPO:0003099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly is normal (i.e. indistinguishable from wild type). Heterochromatin assembly is the assembly of chromatin into a compact and highly condensed form that is often, but not always, transcriptionally silent.","definition_xrefs":["GO:0031507","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin organization during vegetative growth","termid":"FYPO:0002891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal heterochromatin assembly","synonyms":[{"name":"normal heterochromatin assembly during mitotic cell cycle","type":"related"},{"name":"normal heterochromatin assembly during vegetative growth","type":"exact"},{"name":"normal heterochromatin formation","type":"exact"}],"termid":"FYPO:0003099"}


id: PBO:0083785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in regulation of transcription; removes Spt15p (TBP) from DNA via its C-terminal ATPase activity; may have a role in ensuring that soluble TBP is available to bind TATA-less promoters; forms a complex with TBP that binds TATA DNA with high affinity but with altered specificity; the Mot1p-Spt15p-DNA ternary complex contains unbent DNA; coregulates transcription with Spt16p through assembly of preinitiation complex and organization of nucleosomes","termid":"PBO:0083785"}


id: MONDO:0018372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete osteonecrosis (obsolete MONDO:0018372)","termid":"MONDO:0018372","xrefs":{"Monarch":{"xref_id":"0018372"}}}


id: PBO:0084079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-cyclohydrolase I, catalyzes first step in folic acid biosynthesis; human homolog GCH1 is implicated in dopa-responsive dystonia (DRD), and can complement yeast null mutant","termid":"PBO:0084079"}


id: GO:1990800
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An anaphase promoting complex bound to a fizzy-related family APC activator that regulates meiotic exit by activating the APC/C to target meiotic cyclins for destruction during meiosis.","definition_xrefs":["PMID:11493649"],"gene_count":0,"genotype_count":0,"name":"obsolete meiotic APC-fizzy-related complex (obsolete GO:1990800)","termid":"GO:1990800"}


id: MONDO:0002275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atherosclerosis that is not localized.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atherosclerosis","termid":"MONDO:0005311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"generalized atherosclerosis","secondary_identifiers":["SCTID:39823006","NCIT:C35767","UMLS:C0017327","DOID:2347","ICD9:440.9","MEDGEN:4866","ICD10CM:I70.91"],"synonyms":[{"name":"generalised and unspecified atherosclerosis","type":"exact"},{"name":"generalized and unspecified atherosclerosis","type":"exact"},{"name":"generalized atherosclerosis","type":"exact"}],"termid":"MONDO:0002275","xrefs":{"Monarch":{"xref_id":"0002275"}}}


id: MONDO:0000372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stage 0 carcinoma of the pharynx according to the American Joint Committee on Cancer, 6th, 7th, and 8th editions.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"},{"relation_name":"is_a","term_name":"carcinoma of pharynx","termid":"MONDO:0021345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pharynx carcinoma in situ","secondary_identifiers":["NCIT:C4942","MEDGEN:83851","UMLS:C0347098","SCTID:92681005","DOID:0050611"],"synonyms":[{"name":"carcinoma in situ of pharynx","type":"exact"},{"name":"carcinoma in situ of the pharynx","type":"exact"},{"name":"pharyngeal cancer stage 0","type":"exact"},{"name":"pharyngeal carcinoma in situ","type":"exact"},{"name":"pharynx carcinoma in situ","type":"exact"},{"name":"pharynx in situ carcinoma","type":"exact"},{"name":"stage 0 carcinoma of pharynx","type":"exact"},{"name":"stage 0 carcinoma of the pharynx","type":"exact"},{"name":"stage 0 pharyngeal cancer","type":"exact"},{"name":"stage 0 pharyngeal carcinoma","type":"exact"},{"name":"stage 0 pharyngeal throat cancer","type":"exact"},{"name":"stage 0 pharynx carcinoma","type":"exact"}],"termid":"MONDO:0000372","xrefs":{"Monarch":{"xref_id":"0000372"}}}


id: RO:0002217
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x actively participates in y if and only if x participates in y and x realizes some active role","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in","termid":"RO:0000056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actively_participates_in","termid":"RO:0002217"}


id: MONDO:0011898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease recessive intermediate A","termid":"MONDO:0012014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease, axonal, with vocal cord paresis, autosomal recessive","secondary_identifiers":["MEDGEN:375113","UMLS:C1843183","OMIM:607706"],"synonyms":[{"name":"CMT2 with vocal cord paresis, autosomal recessive","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, with vocal cord paresis, autosomal recessive","type":"exact"},{"name":"Charcot-Marie-Tooth disease, type 4A, axonal form","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy, axonal, with vocal cord paresis, autosomal recessive","type":"related"}],"termid":"MONDO:0011898","xrefs":{"Monarch":{"xref_id":"0011898"}}}


id: PBO:0058258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4636","termid":"PBO:0058258"}


id: PBO:0087330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sorting nexin; involved in the retrieval of late-Golgi SNAREs from the post-Golgi endosome to the trans-Golgi network; interacts with Snx4p","termid":"PBO:0087330"}


id: MONDO:0005760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fibroepithelial neoplasm (obsolete MONDO:0005760)","termid":"MONDO:0005760","xrefs":{"Monarch":{"xref_id":"0005760"}}}


id: PBO:0038675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase medium chain family member 2A","termid":"PBO:0038675"}


id: MONDO:0008855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Immunodeficiency by defective expression of HLA class 2 is a rare primary genetic immunodeficiency disorder characterized by partial or complete absence of human leukocyte antigen class 2 expression resulting in severe defect in both cellular and humoral immune response to antigens. The disorder presents clinically as marked susceptibility to infections, severe malabsorption and failure to thrive and is often fatal in early childhood.","definition_xrefs":["Orphanet:572"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"severe combined immunodeficiency","termid":"MONDO:0015974"},{"relation_name":"is_a","term_name":"familial severe combined immunodeficiency","termid":"MONDO:0031520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"MHC class II deficiency","secondary_identifiers":["NCIT:C176823","OMIMPS:209920","MESH:D016511","GARD:824","MESH:C537079","NCIT:C3895","NANDO:1200329","icd11.foundation:2021339495","UMLS:C5447452","MEDGEN:1781237","DOID:5812","SCTID:71904008","NANDO:2200702"],"synonyms":[{"name":"BARE lymphocyte syndrome","type":"related"},{"name":"BARE lymphocyte syndrome, type II","type":"related"},{"name":"BARE lymphocyte syndrome, type II, complementation group B, included","type":"related"},{"name":"BARE lymphocyte syndrome, type II, complementation group C, included","type":"related"},{"name":"BARE lymphocyte syndrome, type II, complementation group D, included","type":"related"},{"name":"BARE lymphocyte syndrome, type II, complementation group E, included","type":"related"},{"name":"BLS","type":"related"},{"name":"BLS 2","type":"related"},{"name":"BLS type II","type":"related"},{"name":"BLS, type II","type":"related"},{"name":"BLSII","type":"related"},{"name":"Bare lymphocyte syndrome","type":"related"},{"name":"Bare lymphocyte syndrome 2","type":"related"},{"name":"Bare lymphocyte syndrome type 2","type":"related"},{"name":"Bare lymphocyte syndrome, type 2","type":"related"},{"name":"Bare lymphocyte syndrome, type II","type":"related"},{"name":"Bare lymphocyte syndrome, type II, complementation group A","type":"related"},{"name":"Bare lymphocyte syndrome, type II, complementation group B","type":"related"},{"name":"Bare lymphocyte syndrome, type II, complementation group C","type":"related"},{"name":"Bare lymphocyte syndrome, type II, complementation group D","type":"related"},{"name":"Bare lymphocyte syndrome, type II, complementation group E","type":"related"},{"name":"Bls, type 2","type":"related"},{"name":"HLA class 2-negative SCID","type":"exact"},{"name":"HLA class 2-negative severe combined immunodeficiency","type":"exact"},{"name":"MHC class II expression deficiency","type":"exact"},{"name":"SCID due to absent class II HLA antigens","type":"exact"},{"name":"SCID, HLA CLASS II-NEGATIVE BARE lymphocyte syndrome, type II, complementation group A, included","type":"related"},{"name":"SCID, HLA Class 2-negative","type":"related"},{"name":"SCID, HLA Class II-negative","type":"related"},{"name":"bare lymphocyte syndrome type II","type":"related"},{"name":"immunodeficiency by defective expression of HLA class 2","type":"related"},{"name":"immunodeficiency by defective expression of HLA class type 2","type":"exact"},{"name":"major histocompatibility complex class II expression deficiency","type":"exact"},{"name":"severe combined immunodeficiency, HLA Class II-negative","type":"related"},{"name":"severe combined immunodeficiency, HLA class ii-negative","type":"related"}],"termid":"MONDO:0008855","xrefs":{"Monarch":{"xref_id":"0008855"}}}


id: PBO:0087555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of SAGA and NuA4 histone acetyltransferase complexes; interacts with acidic activators (e.g., Gal4p) which leads to transcription activation; similar to human TRRAP, which is a cofactor for c-Myc mediated oncogenic transformation","termid":"PBO:0087555"}


id: GO:0042603
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protective structure surrounding some fungi and bacteria, attached externally to the cell wall and composed primarily of polysaccharides. Capsules are highly organized structures that adhere strongly to cells and cannot be easily removed. Capsules play important roles in pathogenicity, preventing phagocytosis by other cells, adherence, and resistance to desiccation.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycocalyx","termid":"GO:0030112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"capsule","secondary_identifiers":["GO:0042604","Wikipedia:Capsule_(microbiology)","GO:0030113"],"termid":"GO:0042603"}


id: PR:Q9HE00
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A metaxin-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.04","secondary_identifiers":["UniProtKB:Q9HE00"],"synonyms":[{"name":"Spom972h-MTX2","type":"exact"}],"termid":"PR:Q9HE00"}


id: MONDO:0005798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal disease in human immunodeficiency virus (HIV)-infected patients. It is characterized by nephrotic syndrome, azotemia, normal to large kidneys on ultrasound images, and focal segmental glomerulosclerosis on renal biopsy findings.","definition_xrefs":["NCIT:C26918"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"excluded_subClassOf","term_name":"HIV infectious disease","termid":"MONDO:0005109"},{"relation_name":"excluded_subClassOf","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"inherited focal segmental glomerulosclerosis","termid":"MONDO:0005363"},{"relation_name":"is_a","term_name":"AIDS-related disorder","termid":"MONDO:0024571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0005046"],"is_obsolete":false,"name":"HIV-associated nephropathy","secondary_identifiers":["MEDGEN:37145","MESH:D016263","EFO:0007313","UMLS:C0078911"],"synonyms":[{"name":"AIDS-associated nephropathy","type":"exact"},{"name":"AIDS-related nephropathy","type":"exact"},{"name":"HIV nephropathy","type":"exact"},{"name":"HIVAN","type":"exact"}],"termid":"MONDO:0005798","xrefs":{"Monarch":{"xref_id":"0005798"}}}


id: MONDO:0032665
data:
  {"annotated_genes":["SJAG_00886"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87876],"is_not":false,"summary":null,"term":"MONDO:0032665"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00886":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 68","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618302","MEDGEN:1648490","DOID:0081229","UMLS:C4749033"],"synonyms":[{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER, AUTOSOMAL RECESSIVE 68","type":"related"},{"name":"MRT68","type":"related"},{"name":"Mental Retardation, Autosomal Recessive 68","type":"related"}],"termid":"MONDO:0032665","terms_by_termid":{"MONDO:0032665":null},"xrefs":{"Monarch":{"xref_id":"0032665"}}}


id: PBO:0027465
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_wall_thickness_at_old_end_during_vegetative_growth","termid":"PBO:0027465"}


id: PBO:0004069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin Dnm1","termid":"PBO:0004069"}


id: PBO:0069520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 789, pseudogene","termid":"PBO:0069520"}


id: GO:0160195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phospholipase C/protein kinase C signal transduction.","definition_xrefs":["PMID:32033984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"phospholipase C/protein kinase C signal transduction","termid":"GO:0141212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of phospholipase C/protein kinase C signal transduction","synonyms":[{"name":"negative regulation of PLC/PKC signal transduction","type":"exact"}],"termid":"GO:0160195"}


id: GO:0043707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to either a host cell or a microbial cell of the same species, or to an underlying host substrate, such as the extracellular matrix, via cell adhesion molecules, occurring during the formation of a biofilm in or on a host species.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion involved in single-species biofilm formation","termid":"GO:0043709"},{"relation_name":"part_of","term_name":"single-species biofilm formation in or on host organism","termid":"GO:0044407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell adhesion involved in single-species biofilm formation in or on host organism","synonyms":[{"name":"cell adhesion during single-species biofilm formation in or on host organism","type":"related"}],"termid":"GO:0043707"}


id: PBO:0080971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 8 opposite strand","termid":"PBO:0080971"}


id: PBO:0058345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4718","termid":"PBO:0058345"}


id: PBO:0061486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuregulin 4","termid":"PBO:0061486"}


id: PBO:0026887
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_sister_chromatid_segregation_with_lagging_chromosomes,_complete_sister_chromatid_separation,_and_decreased_rate_of_mitotic_spindle_elongation","termid":"PBO:0026887"}


id: GO:1904073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trophectodermal cell proliferation.","definition_xrefs":["PMID:24508636","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"trophectodermal cell proliferation","termid":"GO:0001834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of trophectodermal cell proliferation","synonyms":[{"name":"regulation of trophectoderm cell proliferation","type":"exact"}],"termid":"GO:1904073"}


id: GO:0009307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A defense process found in many bacteria and archaea that protects the organism from invading foreign DNA by cleaving it with a restriction endonuclease. The organism's own DNA is protected by methylation of a specific nucleotide, which occurs immediately following replication, in the same target site as the restriction enzyme.","definition_xrefs":["GOC:jl","UniProtKB-KW:KW-0680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA modification","termid":"GO:0006304"},{"relation_name":"is_a","term_name":"clearance of foreign intracellular DNA","termid":"GO:0044355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA restriction-modification system","synonyms":[{"name":"DNA restriction","type":"broad"}],"termid":"GO:0009307"}


id: PBO:0045615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 26 (pseudogene)","termid":"PBO:0045615"}


id: SO:0001778
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant present in the embryo that is carried by every cell in the body.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_origin","termid":"SO:0001762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germline_variant","synonyms":[{"name":"germline variant","type":"exact"}],"termid":"SO:0001778"}


id: PBO:0051446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-32 (non-functional)","termid":"PBO:0051446"}


id: PBO:0082593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Citrate synthase, peroxisomal isozyme involved in glyoxylate cycle; catalyzes condensation of acetyl coenzyme A and oxaloacetate to form citrate; expression is controlled by Rtg1p and Rtg2p transcription factors; SCF-Ucc1 regulates level of Cit2p to maintain citrate homeostasis; oxaloacetate-dependent positive feedback loop inhibits Cit2p ubiquitination; CIT2 has a paralog, CIT1, that arose from the whole genome duplication","termid":"PBO:0082593"}


id: PBO:0060013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 1","termid":"PBO:0060013"}


id: RO:0002634
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoparasite_of","synonyms":[{"name":"lives inside of","type":"related"}],"termid":"RO:0002634"}


id: PR:Q9C107
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat and HMG-box DNA-binding protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01372","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome loss protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.02c","secondary_identifiers":["UniProtKB:Q9C107"],"synonyms":[{"name":"DNA polymerase alpha accessory factor Mcl1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-WDHD1","type":"exact"}],"termid":"PR:Q9C107"}


id: FYPO:0000585
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore wall biogenesis does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore wall biogenesis","termid":"FYPO:0000580"},{"relation_name":"is_a","term_name":"abolished cell wall biogenesis","termid":"FYPO:0003639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000121","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abolished ascospore wall biogenesis","synonyms":[{"name":"absent spore wall formation","type":"related"},{"name":"ascospore wall biogenesis abolished","type":"exact"},{"name":"spore wall formation abolished","type":"related"},{"name":"spore wall formation: absent","type":"related"}],"termid":"FYPO:0000585"}


id: PATO:0000436
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000436 concrete (obsolete PATO:0000436)","termid":"PATO:0000436"}


id: FYPO:0003717
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the actin cytoskeleton is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cytoskeleton during vegetative growth","termid":"FYPO:0004739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal actin cytoskeleton morphology during vegetative growth","synonyms":[{"name":"normal actin cytoskeleton morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003717"}


id: PBO:0085180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of several telomeric Y' element-encoded DNA helicases; known as Y'-Help1 (Y'-HELicase Protein 1)","termid":"PBO:0085180"}


id: PBO:0085732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the synthesis of GlcNAc-PI; GlcNAc-PI is the first intermediate in the synthesis of glycosylphosphatidylinositol (GPI) anchors; homologous to the human PIG-H protein; GlcNAc-PI stands for N-acetylglucosaminyl phosphatidylinositol","termid":"PBO:0085732"}


id: PR:000050217
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe) that has been ubiquitinated on Lys-15. Example: UniProtKB:P09988, 2-136, Lys-15, MOD:01148.","definition_xrefs":["PomBase:MAH","PRO:CNA","PMID:31468675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht1/Ubiq(K14)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"H3K14ub","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.1, initiator methionine removed K14-ubiquitinated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"hht1/InitMet-/Ubiq:(K15)","type":"exact"},{"name":"hht1/Ubiq(K14)","type":"exact"}],"termid":"PR:000050217"}


