# terms

id: GO:0008543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"},{"relation_name":"part_of","term_name":"cellular response to fibroblast growth factor stimulus","termid":"GO:0044344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-190236"],"synonyms":[{"name":"FGF receptor signaling pathway","type":"exact"},{"name":"FGF receptor signalling pathway","type":"exact"},{"name":"FGFR signaling pathway","type":"exact"},{"name":"fibroblast growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0008543"}


id: GO:0032419
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of an lysosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete extrinsic component of lysosome membrane (obsolete GO:0032419)","synonyms":[{"name":"extrinsic to lysosomal membrane","type":"exact"},{"name":"extrinsic to lysosome membrane","type":"exact"}],"termid":"GO:0032419"}


id: MONDO:0007986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metatropic dysplasia (MTD) is a rare spondyloepimetaphyseal dysplasia characterized by a long trunk and short limbs in infancy followed by severe and progressive kyphoscoliosis causing a reversal in proportions during childhood (short trunk and long limbs) and a final short stature in adulthood.","definition_xrefs":["Orphanet:2635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"TRPV4-related bone disorder","termid":"MONDO:0018240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"metatropic dysplasia","secondary_identifiers":["OMIM:156530","DOID:0111514","GARD:3571","NCIT:C175209","MESH:C537356","NORD:1445","SCTID:22764001","UMLS:C0265281","MEDGEN:82699"],"synonyms":[{"name":"Metatropic Dysplasia I","type":"exact"},{"name":"Metatropic dwarfism","type":"exact"},{"name":"Metatropic dysplasia, nonlethal dominant","type":"related"},{"name":"metatropic dysplasia","type":"exact"}],"termid":"MONDO:0007986","xrefs":{"Monarch":{"xref_id":"0007986"}}}


id: GO:0034830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (2Z)-2,4-dihydroxydec-2-enedioate = pyruvate + 7-oxoheptanoate.","definition_xrefs":["UM-BBD_reactionID:r1174"],"gene_count":0,"genotype_count":0,"name":"obsolete (2Z)-2,4-dihydroxydec-2-enedioate aldolase activity (obsolete GO:0034830)","termid":"GO:0034830"}


id: GO:0050487
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl phosphate + H+ + sulfite = phosphate + sulfoacetaldehyde.","definition_xrefs":["RHEA:24204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sulfoacetaldehyde acetyltransferase activity","secondary_identifiers":["MetaCyc:RXN-2364","KEGG_REACTION:R05651","EC:2.3.3.15"],"synonyms":[{"name":"acetyl-phosphate:sulfite S-acetyltransferase (acyl-phosphate hydrolysing, 2-oxoethyl-forming)","type":"related"},{"name":"sulphoacetaldehyde acetyltransferase activity","type":"exact"}],"termid":"GO:0050487"}


id: PBO:0061380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 40","termid":"PBO:0061380"}


id: GO:0035855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a megakaryocyte cell over time, from its formation to the mature structure. Megakaryocyte development does not include the steps involved in committing a cell to a megakaryocyte fate. A megakaryocyte is a giant cell 50 to 100 micron in diameter, with a greatly lobulated nucleus, found in the bone marrow.","definition_xrefs":["GOC:vk","GOC:BHF","CL:0000556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell development","termid":"GO:0061515"},{"relation_name":"part_of","term_name":"megakaryocyte differentiation","termid":"GO:0030219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"megakaryocyte development","synonyms":[{"name":"megakaryocyte cell development","type":"exact"}],"termid":"GO:0035855"}


id: MONDO:0958128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bronchiolitis obliterans syndrome","termid":"MONDO:0015265"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-transplant-related bronchiolitis obliterans","secondary_identifiers":["Orphanet:658612","UMLS:C5925142","MEDGEN:1863569"],"termid":"MONDO:0958128","xrefs":{"Monarch":{"xref_id":"0958128"}}}


id: GO:0070299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signal transduction via a phosphorelay signal transduction system.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorelay signal transduction system","termid":"GO:0070297"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"phosphorelay signal transduction system","termid":"GO:0000160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of phosphorelay signal transduction system","synonyms":[{"name":"activation of two-component signal transduction","type":"narrow"},{"name":"positive regulation of histidyl-aspartyl phosphorelay","type":"exact"},{"name":"positive regulation of two-component signal transduction system (phosphorelay)","type":"narrow"},{"name":"stimulation of two-component signal transduction","type":"narrow"},{"name":"up regulation of two-component signal transduction","type":"exact"},{"name":"up-regulation of two-component signal transduction","type":"exact"},{"name":"upregulation of two-component signal transduction","type":"exact"}],"termid":"GO:0070299"}


id: PBO:0014619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin-dependent kinase kinase 2","termid":"PBO:0014619"}


id: GO:0034488
data:
  {"annotated_genes":["SJAG_00051"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92266],"is_not":false,"summary":null,"term":"GO:0034488"}]},"cv_name":"biological_process","definition":"The directed movement of basic amino acids out of the vacuole, across the vacuolar membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane export from vacuole","termid":"GO:0032974"},{"relation_name":"is_a","term_name":"vacuolar amino acid transmembrane transport","termid":"GO:0034487"},{"relation_name":"is_a","term_name":"basic amino acid transmembrane transport","termid":"GO:1990822"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00051":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"basic amino acid transmembrane export from vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034488","terms_by_termid":{"GO:0034488":null}}


id: GO:0033364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a secretory granule in a mast cell. A secretory granule is a small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mast cell secretory granule organization","synonyms":[{"name":"mast cell secretory granule maturation","type":"related"},{"name":"mast cell secretory granule organisation","type":"exact"},{"name":"mast cell secretory granule organization and biogenesis","type":"related"}],"termid":"GO:0033364"}


id: MONDO:0019422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked syndromic intellectual disability characterized by intellectual deficit, hypotonia, absent deep tendon reflexes, tapered fingers and excessive fingerprint arches, genu valgum, a characteristic face and small teeth. It has been described in four males from two generations of one family. The causative gene appears to be located in the q13 region of the X chromosome.","definition_xrefs":["Orphanet:85325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"X-linked intellectual disability, Stevenson type","secondary_identifiers":["SCTID:718909001","UMLS:C4305077","MEDGEN:930746","GARD:19058"],"termid":"MONDO:0019422","xrefs":{"Monarch":{"xref_id":"0019422"}}}


id: GO:0102478
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-L-arabinofuranosyl-(1->2)-beta-L-arabinofuranose + H2O = 2 beta-L-arabinofuranose.","definition_xrefs":["RHEA:36051","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"beta-L-arabinofuranosidase activity","secondary_identifiers":["MetaCyc:RXN-14089","EC:3.2.1.185"],"termid":"GO:0102478"}


id: GO:0038134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a ligand to an epidermal growth factor receptor (EGFR/ERBB1) on the surface of a cell, followed by transmission of the signal by a heterodimeric complex of ERBB2 and EGFR. ERBB2, which does not bind any known ligand, is activated through formation of a heterodimer with another ligand-activated ERBB family member such as EGFR.","definition_xrefs":["GOC:signaling","PMID:16460914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal growth factor receptor signaling pathway","termid":"GO:0007173"},{"relation_name":"is_a","term_name":"ERBB2 signaling pathway","termid":"GO:0038128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"ERBB2-EGFR signaling pathway","synonyms":[{"name":"EGFR-HER2 signaling pathway","type":"exact"},{"name":"ERBB2-EGFR signalling pathway","type":"exact"}],"termid":"GO:0038134"}


id: PR:O42906
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPN-loop GTPase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02574","PANTHER:PTHR21231:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPN-loop GTPase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.15","secondary_identifiers":["UniProtKB:O42906"],"synonyms":[{"name":"Spom972h-GPN1","type":"exact"}],"termid":"PR:O42906"}


id: PBO:0113173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Invertase; sucrose hydrolyzing enzyme; seven closely related but non-identical invertase genes have been described in yeast (SUC1-5, 7, 8) but only SUC2 is in the reference strain (S288C); mapped to -152.0 cM on chrIV","termid":"PBO:0113173"}


id: MONDO:0008585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A life-threatening condition that can potentially complicate pregnancy. It is named for 3 features of the condition: H emolysis, E levated L iver enzyme levels, and L ow P latelet levels. It typically occurs in the last 3 months of pregnancy (the third trimester) but can also start soon after delivery. A wide range of non-specific symptoms may be present in women with HELLP syndrome. Symptoms may include fatigue; malaise; fluid retention and excess weight gain; headache; nausea and vomiting; pain in the upper right or middle of the abdomen; blurry vision; and rarely, nosebleed or seizures. The cause of HELLP syndrome is not known, but certain risk factors have been associated with the condition. It is most common in women with preeclampsia or eclampsia. If not diagnosed and treated quickly, HELLP syndrome can lead to serious complications for the mother and baby.The main treatment is to deliver the baby as soon as possible, even if premature. Treatment may also include medications needed for the mother or baby, and blood transfusion for severe bleeding problems.","direct_ancestors":[{"relation_name":"is_a","term_name":"severe pre-eclampsia","termid":"MONDO:0001641"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HELLP syndrome","secondary_identifiers":["MESH:D017359","UMLS:C0162739","EFO:0007297","NCIT:C84750","MedDRA:10049058","Orphanet:244242","GARD:8528","DOID:13133","icd11.foundation:1748922908","MEDGEN:58162"],"synonyms":[{"name":"PEE1","type":"related"},{"name":"PREECLAMPSIA/eclampsia 1","type":"related"},{"name":"PREG1","type":"related"},{"name":"hemolysis, elevated liver enzymes, and low platelet count","type":"related"},{"name":"hemolysis, elevated liver enzymes, low platelets in pregnancy","type":"exact"},{"name":"hemolysis, elevated liver enzymes, lowered platelets","type":"related"},{"name":"hemolysis-elevated liver enzymes-low platelet count syndrome","type":"exact"},{"name":"hemolysis-elevated liver enzymes-low platelets syndrome","type":"exact"},{"name":"hypertension, pregnancy-induced","type":"related"},{"name":"toxaemia of pregnancy","type":"related"},{"name":"toxemia of pregnancy","type":"related"}],"termid":"MONDO:0008585","xrefs":{"Monarch":{"xref_id":"0008585"}}}


id: SO:0002236
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 18S_rRNA, which functions as the small subunit of the ribosome in eukaryotes.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_SSU_rRNA_gene","termid":"SO:0002362"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_18S_gene","synonyms":[{"name":"18S rRNA gene","type":"exact"},{"name":"18S_rRNA_gene","type":"exact"}],"termid":"SO:0002236"}


id: GO:0071203
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that localizes at the surface of endosomes, where it recruits and activates the Arp2/3 complex to induce actin polymerization. In human, the WASH complex is composed of F-actin-capping protein subunits alpha and beta, WASH1, FAM21, KIAA1033, KIAA0196 and CCDC53.","definition_xrefs":["GOC:sp","PMID:19922875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"WASH complex","termid":"GO:0071203"}


id: GO:0043527
data:
  {"annotated_genes":["SJAG_02637","SJAG_04181","SJAG_02386","SJAG_04890","SJAG_04848","SJAG_04680"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76703,75911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031515"},{"annotations":[106069,77169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043528"},{"annotations":[117717,59389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106143"}]},"cv_name":"cellular_component","definition":"A multimeric protein complex involved in the methylation of specific nucleotides in tRNA.","definition_xrefs":["GOC:jl","PMID:24904644","PMID:9851972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02386":null,"SJAG_02637":null,"SJAG_04181":null,"SJAG_04680":null,"SJAG_04848":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"tRNA methyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0043527","terms_by_termid":{"GO:0031515":null,"GO:0043528":null,"GO:0106143":null}}


id: FYPO:0003256
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of proline into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal proline import","synonyms":[{"name":"abnormal L-proline import","type":"exact"},{"name":"abnormal L-proline import across plasma membrane","type":"exact"},{"name":"abnormal proline import during mitotic cell cycle","type":"related"},{"name":"abnormal proline import during vegetative growth","type":"exact"},{"name":"abnormal proline import into cell","type":"exact"},{"name":"abnormal proline uptake","type":"exact"}],"termid":"FYPO:0003256"}


id: PBO:0043254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 12","termid":"PBO:0043254"}


id: PR:000044503
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitosis inducer protein kinase cdr2 (Schizosaccharomyces pombe) that has been phosphorylated on a Ser residue within the C-terminal self-inhibitory tail. Example: UniProtKB:P87050-1, Ser-755, MOD:00046.","definition_xrefs":["PMID:24316795","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitosis inducer protein kinase cdr2 (Schizosaccharomyces pombe)","termid":"PR:000030008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitosis inducer protein kinase cdr2 phosphorylated 1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC57A10.02","synonyms":[{"name":"cdr2 phosphorylated","type":"related"}],"termid":"PR:000044503"}


id: GO:0051168
data:
  {"annotated_genes":["SJAG_04366","SJAG_01374","SJAG_04645","SJAG_00375","SJAG_03283","SJAG_03299","SJAG_01013","SJAG_03012","SJAG_02661","SJAG_00641","SJAG_04589","SJAG_01715","SJAG_04310","SJAG_01584","SJAG_00178","SJAG_03593","SJAG_03882","SJAG_04622","SJAG_01339","SJAG_03156","SJAG_04017","SJAG_04308","SJAG_03122","SJAG_02704","SJAG_04536","SJAG_04347","SJAG_01449","SJAG_04940","SJAG_03300","SJAG_04464","SJAG_00992","SJAG_04721","SJAG_02209","SJAG_04083","SJAG_04360","SJAG_04480","SJAG_01529","SJAG_02534","SJAG_01338","SJAG_04379","SJAG_00471","SJAG_01534","SJAG_02250","SJAG_01391","SJAG_04148","SJAG_00298","SJAG_04472","SJAG_04202","SJAG_00753","SJAG_03986","SJAG_03836","SJAG_01358","SJAG_01185","SJAG_01365","SJAG_03971","SJAG_03729","SJAG_02861","SJAG_02891","SJAG_02210","SJAG_05328","SJAG_02757","SJAG_04312","SJAG_02520","SJAG_03847","SJAG_03002","SJAG_04115","SJAG_02531","SJAG_03693","SJAG_03719","SJAG_02274","SJAG_01065","SJAG_01245","SJAG_04188","SJAG_01652","SJAG_04656","SJAG_00093","SJAG_01083","SJAG_01805","SJAG_04400"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119274,91356,63227,81980,78452,103079,61638,79283,74474,74558,75838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006406"},{"annotations":[74942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[120039,71646,76225,98859,109592,94074,73146,74941,77450,82204,113735,75898,105876,98446,112405,79099,75513,103327,76471,103795,116458,118056,118317,76129,104583,111834,113107,74788,117804,120958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016973"},{"annotations":[112998,95691,102363,103783],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0046827"},{"annotations":[119686,73333,103081,65945,119401,95050,111564,120040,65579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006611"},{"annotations":[77892,81982,58977,78416,78913,64942,65915,92915,101556,107698,118230,119687,92916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000055"},{"annotations":[71619,77893,81983,72110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000056"},{"annotations":[98029,95873,112408,81268,73275,113429,96880,78166,103328,60812,107334,93606,90876,116203,108116,102335,105877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000054"},{"annotations":[76904,95874,77354,81868,98030,107012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006405"},{"annotations":[73915,107225,80347,107699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006409"},{"annotations":[81331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071528"}]},"cv_name":"biological_process","definition":"The directed movement of substances out of the nucleus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleocytoplasmic 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export","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"export from nucleus","type":"exact"},{"name":"nucleus export","type":"exact"},{"name":"substance nuclear export","type":"exact"}],"termid":"GO:0051168","terms_by_termid":{"GO:0000054":null,"GO:0000055":null,"GO:0000056":null,"GO:0006405":null,"GO:0006406":null,"GO:0006409":null,"GO:0006611":null,"GO:0016973":null,"GO:0031990":null,"GO:0046827":null,"GO:0071528":null}}


id: PBO:0059581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metastasis associated 1 family member 3","termid":"PBO:0059581"}


id: PBO:0040719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL9 like","termid":"PBO:0040719"}


id: MONDO:0006890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign tumor arising from the parenchymal cells of the parathyroid glands. In the vast majority of cases, the tumor involves a single parathyroid gland. It is associated with the symptoms of primary hyperparathyroidism, resulting from the excessive production of parathyroid hormone. It is usually surrounded by a well-defined capsule. Capsular invasion, vascular invasion, and perineural invasion are absent.","definition_xrefs":["NCIT:C3916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"benign neoplasm of parathyroid gland","termid":"MONDO:0021463"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parathyroid gland adenoma","secondary_identifiers":["DOID:7608","MedDRA:10033940","MEDGEN:75502","EFO:1001087","SCTID:128474007","UMLS:C0262587","NCIT:C156757","HP:0002897"],"synonyms":[{"name":"adenoma of parathyroid","type":"exact"},{"name":"adenoma of parathyroid gland","type":"exact"},{"name":"adenoma of the parathyroid","type":"exact"},{"name":"adenoma of the parathyroid gland","type":"exact"},{"name":"parathyroid adenoma","type":"exact"},{"name":"parathyroid gland adenoma","type":"exact"}],"termid":"MONDO:0006890","xrefs":{"Monarch":{"xref_id":"0006890"}}}


id: GO:1990392
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A trimeric cell-cell fusion complex that serves as a scaffold for zippering up the extracellular domains, bringing the transmembrane segments into close proximity such that they can continue zippering within the two membranes into one. Two prefusion monomers cluster at the surface of adjacent cells. Parallel EFF-1 interactions occur across cells and a third monomer, which can come from either cell, adds on to make an intermediate, extended trimer.","definition_xrefs":["GOC:bhm","PMID:24725407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"EFF-1 complex","termid":"GO:1990392"}


id: GO:0033050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of clavulanic acid, (2R,3Z,5R)-3-(2-hydroxyethylidene)-7-oxo-4-oxa-1-azabicyclo[3.2.0]heptane-2-carboxylic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clavulanic acid metabolic process","termid":"GO:0033049"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"lactam biosynthetic process","termid":"GO:0072339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"clavulanic acid biosynthetic process","secondary_identifiers":["Wikipedia:Clavulanic_acid"],"synonyms":[{"name":"clavulanic acid anabolism","type":"exact"},{"name":"clavulanic acid biosynthesis","type":"exact"},{"name":"clavulanic acid formation","type":"exact"},{"name":"clavulanic acid synthesis","type":"exact"}],"termid":"GO:0033050"}


id: RO:0002374
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has_fused_element y iff: there exists some z : x has_part z, z homologous_to y, and y is a distinct element, the boundary between x and z is largely fiat","direct_ancestors":[{"relation_name":"is_a","term_name":"evolutionarily_related_to","termid":"RO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_fused_element","termid":"RO:0002374"}


id: GO:0047575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2-(carboxymethyl)-5-oxo-2,5-dihydro-2-furoate + H+ = 5-oxo-4,5-dihydro-2-furylacetate + CO2.","definition_xrefs":["RHEA:23348","EC:4.1.1.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"4-carboxymuconolactone decarboxylase activity","secondary_identifiers":["MetaCyc:4-CARBOXYMUCONOLACTONE-DECARBOXYLASE-RXN","KEGG_REACTION:R03470"],"synonyms":[{"name":"4-carboxymonolactone carboxy-lyase activity","type":"related"},{"name":"4-carboxymuconolactone carboxy-lyase (4,5-dihydro-5-oxofuran-2-acetate-forming)","type":"related"},{"name":"4-carboxymuconolactone carboxy-lyase activity","type":"related"},{"name":"gamma-4-carboxymuconolactone decarboxylase activity","type":"related"}],"termid":"GO:0047575"}


id: GO:2000914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of galactoglucomannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of galactoglucomannan catabolic process","termid":"GO:2000912"},{"relation_name":"positively_regulates","term_name":"galactoglucomannan catabolic process","termid":"GO:2000885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of galactoglucomannan catabolic process","synonyms":[{"name":"positive regulation of galactoglucomannan catabolism","type":"exact"}],"termid":"GO:2000914"}


id: PBO:0030155
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_sister_chromatid_segregation","termid":"PBO:0030155"}


id: GO:1901334
data:
  {"annotated_genes":["SJAG_00265"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070485"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving lactone.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lactone metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"lactone metabolism","type":"exact"}],"termid":"GO:1901334","terms_by_termid":{"GO:0070485":null}}


id: MONDO:0019294
data:
  {"annotated_genes":["SJAG_03846","SJAG_03199","SJAG_04008"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007145"},{"annotations":[87782,87783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024552"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03199":null,"SJAG_03846":null,"SJAG_04008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"mixed dermis disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842502","UMLS:C5681484","Orphanet:79380"],"termid":"MONDO:0019294","terms_by_termid":{"MONDO:0007145":null,"MONDO:0024552":null},"xrefs":{"Monarch":{"xref_id":"0019294"}}}


id: GO:1901323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an erythromycin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to erythromycin","termid":"GO:1901323"}


id: PBO:0076813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teneurin transmembrane protein 1","termid":"PBO:0076813"}


id: PBO:0027542
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-monopolar_intracellular_mitochondrion_distribution","termid":"PBO:0027542"}


id: PBO:0070105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 19 pseudogene","termid":"PBO:0070105"}


id: PR:P79064
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SUMO-activating enzyme subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00484","PANTHER:PTHR10953:SF30","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage tolerance protein rad31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4C5.04","secondary_identifiers":["UniProtKB:P79064"],"synonyms":[{"name":"Spom972h-SAE1","type":"exact"}],"termid":"PR:P79064"}


id: PBO:0042535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK5 regulatory subunit associated protein 2","termid":"PBO:0042535"}


id: GO:0010713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the metabolism of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of collagen metabolic process","termid":"GO:0010712"},{"relation_name":"negatively_regulates","term_name":"collagen metabolic process","termid":"GO:0032963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of collagen metabolic process","termid":"GO:0010713"}


id: PR:O59735
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ceramide synthase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine N-acyltransferase lac1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.15c","secondary_identifiers":["UniProtKB:O59735"],"synonyms":[{"name":"SPBC3E7.15c","type":"related"},{"name":"Spom972h-CERS2","type":"exact"},{"name":"meiotically up-regulated gene 83 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mug83","type":"related"}],"termid":"PR:O59735"}


id: PBO:0089485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-DNA covalent cross-linking repair","termid":"PBO:0089485"}


id: GO:0031560
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that has a role in determining cell polarity, found at the neck of a fungal bud before and during cytokinesis.","definition_xrefs":["PMID:9632790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarisome","termid":"GO:0000133"},{"relation_name":"part_of","term_name":"cellular bud neck","termid":"GO:0005935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0005938"],"is_obsolete":false,"name":"cellular bud neck polarisome","termid":"GO:0031560"}


id: GO:0046302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2-chloro-N-isopropylacetanilide, an acylanide herbicide widely used to protect corn, onion, cabbage, rose bushes, and ornamental plants.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"2-chloro-N-isopropylacetanilide metabolic process","termid":"GO:0018889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-chloro-N-isopropylacetanilide catabolic process","synonyms":[{"name":"2-chloro-N-isopropylacetanilide breakdown","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide catabolism","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide degradation","type":"exact"}],"termid":"GO:0046302"}


id: PBO:0028471
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cytochrome_absorption_spectrum","termid":"PBO:0028471"}


id: MONDO:0014420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Short stature due to primary acid-labile subunit (ALS) deficiency is characterized by moderate postnatal growth deficit, markedly low circulating levels of insulin-like growth factor 1 (IGF-1) and insulin-like growth factor binding protein 3 (IGFBP-3), and hyperinsulinemia, in the absence of growth hormone (GH) deficiency or GH insensitivity.","definition_xrefs":["Orphanet:140941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"growth hormone insensitivity syndrome","termid":"MONDO:0015892"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature due to primary acid-labile subunit deficiency","secondary_identifiers":["OMIM:615961","SCTID:721074002","UMLS:C3900122","MEDGEN:859716","GARD:16964","icd11.foundation:29735645"],"synonyms":[{"name":"ACLSD","type":"related"},{"name":"acid-labile SUBUNIT deficiency","type":"related"},{"name":"acid-labile subunit, deficiency of","type":"exact"}],"termid":"MONDO:0014420","xrefs":{"Monarch":{"xref_id":"0014420"}}}


id: FYPO:0005030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which more ribonucleotides than normal are incorporated into the leading strand during mitotic DNA replication.","definition_xrefs":["PMID:25664722","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ribonucleotide incorporation into DNA","termid":"FYPO:0007680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased ribonucleotide incorporation on leading strand","synonyms":[{"name":"increased rNMP incorporation on leading strand","type":"related"},{"name":"increased rNTP incorporation on leading strand","type":"related"},{"name":"increased ribonucleotide residue incorporation on leading strand","type":"exact"}],"termid":"FYPO:0005030"}


id: MONDO:0013923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive primary microcephaly in which the cause of the disease is a mutation in the CEP152 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 9, primary, autosomal recessive","secondary_identifiers":["UMLS:C3553886","OMIM:614852","DOID:0070292","GARD:15855","MEDGEN:766800"],"synonyms":[{"name":"CEP152 autosomal recessive primary microcephaly","type":"exact"},{"name":"MCPH9","type":"related"},{"name":"autosomal recessive primary microcephaly caused by mutation in CEP152","type":"exact"},{"name":"microcephaly 9, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0013923","xrefs":{"Monarch":{"xref_id":"0013923"}}}


id: MONDO:0002973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma characterized by the presence of malignant large epithelioid melanocytes.","definition_xrefs":["NCIT:C4236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelioid cell melanoma","secondary_identifiers":["MEDGEN:137763","UMLS:C0334443","DOID:4360","ICDO:8771/3"],"synonyms":[{"name":"epithelioid cell malignant melanoma","type":"exact"},{"name":"epithelioid cell melanoma","type":"exact"},{"name":"epithelioid cell melanoma (morphologic abnormality)","type":"exact"},{"name":"epithelioid melanoma","type":"exact"}],"termid":"MONDO:0002973","xrefs":{"Monarch":{"xref_id":"0002973"}}}


id: PR:G2TRS5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC713.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRS5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transmembrane protein C713.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.13","synonyms":[{"name":"Spom972h-SPBC713.13","type":"exact"}],"termid":"PR:G2TRS5"}


id: GO:0010131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of sucrose by the enzymatic action of either invertase or sucrose synthase.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sucrose catabolic process, using invertase or sucrose synthase (obsolete GO:0010131)","synonyms":[{"name":"sucrose breakdown, using invertase or sucrose synthase","type":"exact"},{"name":"sucrose catabolic process, using invertase or sucrose synthase","type":"exact"},{"name":"sucrose catabolism, using invertase or sucrose synthase","type":"exact"},{"name":"sucrose degradation, using invertase or sucrose synthase","type":"exact"}],"termid":"GO:0010131"}


id: PBO:0074369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smith-Magenis syndrome chromosome region, candidate 2","termid":"PBO:0074369"}


id: PBO:0114282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein, F-box","termid":"PBO:0114282"}


id: PBO:0089973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated Paf1 complex subunit Leo1","termid":"PBO:0089973"}


id: PBO:0045896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 gamma pseudogene 8","termid":"PBO:0045896"}


id: PBO:0041558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 48, pseudogene","termid":"PBO:0041558"}


id: PBO:0063954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-5-phosphate 4-kinase type 2 gamma","termid":"PBO:0063954"}


id: PBO:0072276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23 pseudogene 5","termid":"PBO:0072276"}


id: GO:0021599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the abducens nerve. This process pertains to the initial formation of a structure from unspecified parts. The motor function of the abducens nerve is to contract the lateral rectus which results in abduction of the eye.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:jid","GOC:dgh","GOC:cls","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"abducens nerve morphogenesis","termid":"GO:0021598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"abducens nerve formation","synonyms":[{"name":"CN VI biosynthesis","type":"related"},{"name":"CN VI formation","type":"related"}],"termid":"GO:0021599"}


id: PBO:0056799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitofusin 2","termid":"PBO:0056799"}


id: GO:0009104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lipopolysaccharides, any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipopolysaccharide metabolic process","termid":"GO:0008653"},{"relation_name":"is_a","term_name":"macromolecule catabolic process","termid":"GO:0009057"},{"relation_name":"is_a","term_name":"lipid catabolic process","termid":"GO:0016042"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lipopolysaccharide catabolic process","synonyms":[{"name":"LPS catabolic process","type":"exact"},{"name":"lipopolysaccharide breakdown","type":"exact"},{"name":"lipopolysaccharide catabolism","type":"exact"},{"name":"lipopolysaccharide degradation","type":"exact"}],"termid":"GO:0009104"}


id: PBO:0079397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUBB4B pseudogene 4","termid":"PBO:0079397"}


id: FYPO:0007751
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short spindle assembles during the first meiotic nuclear division, and may begin elongation, but does not elongate normally or completely, and collapses during prometaphase I. Upon collapse the spindle may break or shrink.","definition_xrefs":["PomBase:mah","PMID:32723864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle collapse during meiosis I","termid":"FYPO:0007103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"spindle collapse during meiotic prometaphase I","synonyms":[{"name":"broken meiotic spindle during prometaphase I","type":"related"},{"name":"meiosis I spindle collapse during prometaphase","type":"exact"},{"name":"meiotic spindle breakage during prometaphase I","type":"exact"},{"name":"meiotic spindle collapse during prometaphase I","type":"exact"},{"name":"spindle collapse during prometaphase I","type":"exact"},{"name":"spindle collapse during prometaphase of meiosis I","type":"exact"}],"termid":"FYPO:0007751"}


id: FYPO:0006842
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosomes containing the histone H3 variant CenH3 (also called CENP-A; Cnp1 in S. pombe) are assembled over a normal (i.e. indistinguishable from wild type) portion of the centromeric region of the chromosome. CENP-A-containing nucleosomes are assembled into chromatin around centromeres, encompassing the central core and centromeric inner repeat regions.","definition_xrefs":["PMID:28904333","GO:0000729","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin organization","termid":"FYPO:0007940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal spatial extent of CENP-A containing nucleosome assembly","synonyms":[{"name":"normal extent of CENP-A containing nucleosome","type":"related"},{"name":"normal spatial extent of CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"normal spatial extent of CENP-A containing nucleosome assembly during mitotic cell cycle","type":"related"},{"name":"normal spatial extent of CENP-A containing nucleosome assembly during vegetative growth","type":"exact"},{"name":"normal spatial extent of CENP-A deposition","type":"related"},{"name":"normal spatial extent of CENP-A loading","type":"related"},{"name":"normal spatial extent of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"normal spatial extent of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"normal spatial extent of centromere-specific histone exchange","type":"exact"},{"name":"normal spatial extent of centromere-specific nucleosome assembly","type":"exact"},{"name":"normal spatial extent of centromeric DNA replication-independent nucleosome assembly","type":"exact"}],"termid":"FYPO:0006842"}


id: PBO:0077457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 183B, pseudogene","termid":"PBO:0077457"}


id: PBO:0079351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUB bipartite transcription factor","termid":"PBO:0079351"}


id: MONDO:0014457
data:
  {"annotated_genes":["SJAG_00068"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88713],"is_not":false,"summary":null,"term":"MONDO:0014457"}]},"cv_name":"mondo","definition":"Any hyperphosphatasia-intellectual disability syndrome in which the cause of the disease is a mutation in the PIGW gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperphosphatasia-intellectual disability syndrome","termid":"MONDO:0016596"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00068":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"hyperphosphatasia with intellectual disability syndrome 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616025","DOID:0070432","MEDGEN:863395","GARD:18353","UMLS:C4014958"],"synonyms":[{"name":"GPIBD11","type":"related"},{"name":"HPMRS5","type":"related"},{"name":"PIGW hyperphosphatasia-intellectual disability syndrome","type":"exact"},{"name":"glycosylphosphatidylinositol biosynthesis defect 11","type":"related"},{"name":"hyperphosphatasia with intellectual disability syndrome 5","type":"exact"},{"name":"hyperphosphatasia with intellectual disability syndrome type 5","type":"exact"},{"name":"hyperphosphatasia with mental retardation syndrome 5","type":"exact"},{"name":"hyperphosphatasia with mental retardation syndrome type 5","type":"exact"},{"name":"hyperphosphatasia-intellectual disability syndrome caused by mutation in PIGW","type":"exact"}],"termid":"MONDO:0014457","terms_by_termid":{"MONDO:0014457":null},"xrefs":{"Monarch":{"xref_id":"0014457"}}}


id: GO:0046960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An increased in a behavioral response to a repeated stimulus. For example, a shock to the tail of the marine snail Aplysia, to which the snail responds by withdrawing its gill, will result in increased gill withdrawal the next time the skin is touched.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonassociative learning","termid":"GO:0046958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensitization","secondary_identifiers":["Wikipedia:Sensitization"],"termid":"GO:0046960"}


id: GO:0005043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a netrin signal and transmitting the signal from one side of the membrane to the other to contribute to the directed movement of a motile cell away from a higher concentration of netrin.","definition_xrefs":["GOC:dph","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"netrin receptor activity","termid":"GO:0005042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"netrin receptor activity involved in chemorepulsion","synonyms":[{"name":"netrin receptor activity involved in negative chemotaxis","type":"exact"},{"name":"repulsive netrin receptor activity","type":"exact"}],"termid":"GO:0005043"}


id: GO:0090676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a calcium ion is transported from one side of a membrane to the other by means of a low voltage-gated calcium channel.","definition_xrefs":["GOC:bf","PMID:20371816","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"calcium ion transmembrane transport via low voltage-gated calcium channel","synonyms":[{"name":"generation of T-type calcium current","type":"related"}],"termid":"GO:0090676"}


id: PBO:0027865
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_acetylation","termid":"PBO:0027865"}


id: PBO:0063897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class U","termid":"PBO:0063897"}


id: PBO:0086339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudogenic fragment with similarity to flocculins; YAR064W has a paralog, YHR213W-B, that arose from a segmental duplication","termid":"PBO:0086339"}


id: GO:0102928
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: beta-solanine + UDP-L-rhamnose = solanine + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-solanine rhamnosyltransferase activity (obsolete GO:0102928)","termid":"GO:0102928"}


id: PBO:0113384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative phosphomutase; contains a region homologous to the active site of phosphomutases; overexpression suppresses the histidine auxotrophy of an ade3 ade16 ade17 triple mutant and the temperature sensitivity of a tps2 mutant; localizes to cytosol an peroxisomes","termid":"PBO:0113384"}


id: RO:0002011
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a  process that regulates a transport process and the entity transported by that process.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_transport_of","termid":"RO:0002011"}


id: PBO:0078060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 50","termid":"PBO:0078060"}


id: GO:0030670
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a phagocytic vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytic vesicle membrane","termid":"GO:0030666"},{"relation_name":"part_of","term_name":"phagocytic vesicle","termid":"GO:0045335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"phagocytic vesicle membrane","synonyms":[{"name":"phagosome membrane","type":"exact"}],"termid":"GO:0030670"}


id: PBO:0073663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SINHCAF pseudogene 3","termid":"PBO:0073663"}


id: PBO:0116645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 2 binding protein","termid":"PBO:0116645"}


id: GO:0031646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a neurophysiological process.","definition_xrefs":["GOC:tb","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"nervous system process","termid":"GO:0050877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nervous system process","synonyms":[{"name":"activation of neurological process","type":"narrow"},{"name":"positive regulation of neurological process","type":"exact"},{"name":"positive regulation of neurological system process","type":"exact"},{"name":"positive regulation of neurophysiological process","type":"exact"},{"name":"stimulation of neurological process","type":"narrow"},{"name":"up regulation of neurological process","type":"exact"},{"name":"up-regulation of neurological process","type":"exact"},{"name":"upregulation of neurological process","type":"exact"}],"termid":"GO:0031646"}


id: GO:1902455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of stem cell population maintenance.","definition_xrefs":["PMID:22969033","GOC:hjd","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of stem cell population maintenance","termid":"GO:2000036"},{"relation_name":"negatively_regulates","term_name":"stem cell population maintenance","termid":"GO:0019827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of stem cell population maintenance","synonyms":[{"name":"down regulation of maintenance of pluripotency","type":"related"},{"name":"down regulation of stem cell maintenance","type":"exact"},{"name":"down-regulation of maintenance of pluripotency","type":"related"},{"name":"down-regulation of stem cell maintenance","type":"exact"},{"name":"downregulation of maintenance of pluripotency","type":"related"},{"name":"downregulation of stem cell maintenance","type":"exact"},{"name":"inhibition of maintenance of pluripotency","type":"related"},{"name":"inhibition of stem cell maintenance","type":"narrow"},{"name":"negative regulation of maintenance of pluripotency","type":"related"}],"termid":"GO:1902455"}


id: MOD:00479
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to L-glutamyl semialdehyde.","definition_xrefs":["PubMed:1680314","PubMed:9252331","PubMed:11120890","DeltaMass:351","Unimod:344#R"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"},{"relation_name":"is_a","term_name":"glutamyl semialdehyde","termid":"MOD:01440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamyl semialdehyde (Arg)","synonyms":[{"name":"Arg->GluSA","type":"related"},{"name":"Arginine oxidation to glutamic semialdehyde","type":"related"},{"name":"Oxidation of arginine (to glutamic acid)","type":"exact"}],"termid":"MOD:00479"}


id: PBO:0062906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxytocin/neurophysin I prepropeptide","termid":"PBO:0062906"}


id: MONDO:0019764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Laryngo-tracheo-esophageal cleft (LC) type 4 is a serious congenital respiratory tract anomaly characterized by a cleft extending into the thoracic trachea and possibly down to the carina, with respiratory distress.","definition_xrefs":["Orphanet:93941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngotracheoesophageal cleft","termid":"MONDO:0016060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"laryngotracheoesophageal cleft type 4","secondary_identifiers":["GARD:19238","MEDGEN:667243","UMLS:C0584827"],"synonyms":[{"name":"LTEC IV","type":"exact"},{"name":"LTEC4","type":"exact"},{"name":"laryngo-tracheo-esophageal cleft type 4","type":"exact"}],"termid":"MONDO:0019764","xrefs":{"Monarch":{"xref_id":"0019764"}}}


id: MONDO:0022109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete catatrichy (obsolete MONDO:0022109)","secondary_identifiers":["MESH:C535346","OMIM:116850"],"synonyms":[{"name":"forelock","type":"related"}],"termid":"MONDO:0022109","xrefs":{"Monarch":{"xref_id":"0022109"}}}


id: GO:0140323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: anion(in) + solute(out) = anion(out) + solute(in).","definition_xrefs":["GOC:pg"],"gene_count":0,"genotype_count":0,"name":"obsolete solute:monoatomic anion antiporter activity (obsolete GO:0140323)","synonyms":[{"name":"solute:anion antiporter activity","type":"exact"}],"termid":"GO:0140323"}


id: GO:0070316
data:
  {"annotated_genes":["SJAG_02621","SJAG_03689","SJAG_03356"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117985,101480,120112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070317"}]},"cv_name":"biological_process","definition":"A cell cycle process that modulates the rate or extent of the transition from the G0 quiescent state to the G1 phase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"regulates","term_name":"G0 to G1 transition","termid":"GO:0045023"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03356":null,"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of G0 to G1 transition","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070316","terms_by_termid":{"GO:0070317":null}}


id: MONDO:0013742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial mesial temporal lobe epilepsy with febrile seizures (obsolete MONDO:0013742)","secondary_identifiers":["Orphanet:165805"],"synonyms":[{"name":"FEB11","type":"related"},{"name":"febrile seizures, familial, 11","type":"related"},{"name":"febrile seizures, familial, type 11","type":"exact"}],"termid":"MONDO:0013742","xrefs":{"Monarch":{"xref_id":"0013742"}}}


id: PBO:0046677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extended synaptotagmin 3","termid":"PBO:0046677"}


id: MONDO:0001385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Visual impairment due to visual cortex dysfunction.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blindness (disorder)","termid":"MONDO:0001941"},{"relation_name":"is_a","term_name":"visual cortex disorder","termid":"MONDO:0003584"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical blindness","secondary_identifiers":["ICD9:377.75","SCTID:68574006","DOID:11831","UMLS:C0155320","MEDGEN:57834","MESH:D019575","NCIT:C118707"],"synonyms":[{"name":"CVI","type":"exact"},{"name":"cerebral visual impairment","type":"exact"},{"name":"cortical visual impairment","type":"exact"},{"name":"cortical/cerebral visual impairment","type":"exact"}],"termid":"MONDO:0001385","xrefs":{"Monarch":{"xref_id":"0001385"}}}


id: PBO:0050507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox C6","termid":"PBO:0050507"}


id: PBO:0087773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of U3-containing Small Subunit (SSU) processome complex; involved in production of 18S rRNA and assembly of small ribosomal subunit","termid":"PBO:0087773"}


id: PBO:0070243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 183 pseudogene","termid":"PBO:0070243"}


id: PBO:0061663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 37","termid":"PBO:0061663"}


id: PBO:0060281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 15","termid":"PBO:0060281"}


id: PBO:0044488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 39 subfamily A member 1","termid":"PBO:0044488"}


id: PBO:0075526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E6","termid":"PBO:0075526"}


id: GO:0034752
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An aryl hydrocarbon receptor complex found in the cytosol, in which the ligand-binding subunit AhR is not bound to ligand; consists of AhR, two molecules of HSP90, the protein kinase c-Src, and the immunophilin XAP2/AIP.","definition_xrefs":["PMID:9447995","PMID:7598497","PMID:8937476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aryl hydrocarbon receptor complex","termid":"GO:0034751"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005575","GO:0005829","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"cytosolic aryl hydrocarbon receptor complex","synonyms":[{"name":"9S-cytosolic aryl hydrocarbon (Ah) receptor non-ligand activated complex","type":"related"},{"name":"cytosolic AHRC","type":"exact"},{"name":"cytosolic AhR complex","type":"exact"}],"termid":"GO:0034752"}


id: PBO:0064075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 109","termid":"PBO:0064075"}


id: FYPO:0006765
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins, or of specific protein sites, is abnormal during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation","termid":"FYPO:0002677"},{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein phosphorylation during meiotic cell cycle","termid":"FYPO:0006765"}


id: PBO:0027360
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_1,3-beta-D-glucan_synthase_activity_during_vegetative_growth","termid":"PBO:0027360"}


id: MONDO:0002610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small blood vessel hemorrhage into the skin and/or mucous membranes. Newer lesions appear reddish in color. Older lesions are usually a darker purple color and eventually become a brownish-yellow color.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"purpura","secondary_identifiers":["UMLS:C0034150","MEDGEN:19584","DOID:3326","HP:0000979","MESH:D011693","SCTID:387778001"],"synonyms":[{"name":"purpura","type":"exact"},{"name":"purpura (disease)","type":"exact"},{"name":"purpuric disorder","type":"exact"}],"termid":"MONDO:0002610","xrefs":{"Monarch":{"xref_id":"0002610"}}}


id: GO:0010735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of the specifically regulated synthesis of RNA from DNA encoding a specific set of genes as a result of a transcription factor interacting with a serum response element (SRE). A serum response element is a short sequence with dyad symmetry found in the promoters of some of the cellular immediate-early genes, regulated by serum.","definition_xrefs":["GOC:dph","GOC:rl","GOC:BHF","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription via serum response element binding (obsolete GO:0010735)","termid":"GO:0010735"}


id: PBO:0046296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMSY transcriptional repressor, BRCA2 interacting","termid":"PBO:0046296"}


id: MONDO:0004603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue disorder","termid":"MONDO:0003900"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagenopathy","termid":"MONDO:0004603","xrefs":{"Monarch":{"xref_id":"0004603"}}}


id: GO:0006353
data:
  {"annotated_genes":["SJAG_03179","SJAG_04942","SJAG_00637","SJAG_02242","SJAG_02037","SJAG_02922","SJAG_03923","SJAG_02156","SJAG_04527","SJAG_04106","SJAG_01713","SJAG_03624","SJAG_03126","SJAG_03761","SJAG_04006","SJAG_04855","SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113950],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1904595"},{"annotations":[98293,116215,104211,117990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006363"},{"annotations":[81138,109655,117991,76073,57553,61588,76161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006369"},{"annotations":[61944,109423,66363,99160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030847"},{"annotations":[57113,61814,101808,117992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006386"}]},"cv_name":"biological_process","definition":"The completion of transcription: the RNA polymerase pauses, the RNA-DNA hybrid dissociates, followed by the release of the RNA polymerase from its DNA template.","definition_xrefs":["GOC:txnOH","PMID:18280161","PMID:15020047","PMID:30978344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00637":null,"SJAG_01713":null,"SJAG_02037":null,"SJAG_02156":null,"SJAG_02242":null,"SJAG_02922":null,"SJAG_03126":null,"SJAG_03179":null,"SJAG_03624":null,"SJAG_03689":null,"SJAG_03761":null,"SJAG_03923":null,"SJAG_04006":null,"SJAG_04106":null,"SJAG_04527":null,"SJAG_04855":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"DNA-templated transcription termination","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0001125"],"synonyms":[{"name":"DNA-dependent transcription, termination","type":"exact"},{"name":"DNA-templated transcription, termination","type":"exact"},{"name":"termination of DNA-dependent transcription","type":"exact"},{"name":"termination of transcription, DNA-dependent","type":"exact"},{"name":"transcription termination factor activity","type":"related"},{"name":"transcription termination from bacterial-type RNA polymerase promoter","type":"narrow"},{"name":"transcription termination, DNA-dependent","type":"related"},{"name":"transcriptional complex disassembly","type":"broad"}],"termid":"GO:0006353","terms_by_termid":{"GO:0006363":null,"GO:0006369":null,"GO:0006386":null,"GO:0030847":null,"GO:1904595":null}}


id: GO:2001154
data:
  {"annotated_genes":["SJAG_05006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001172"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glucose catabolic process to ethanol.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucose metabolic process","termid":"GO:0010906"},{"relation_name":"is_a","term_name":"regulation of fermentation","termid":"GO:0043465"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"regulates","term_name":"glycolytic fermentation to ethanol","termid":"GO:0019655"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006091","GO:0005975"],"is_obsolete":false,"name":"regulation of glycolytic fermentation to ethanol","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of ethanol fermentation","type":"exact"},{"name":"regulation of glucose fermentation to ethanol","type":"exact"}],"termid":"GO:2001154","terms_by_termid":{"GO:2001172":null}}


id: PBO:0063597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 11 beta","termid":"PBO:0063597"}


id: PBO:0090266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur ATPase involved in ribosome biogenesis and translation Rli1","termid":"PBO:0090266"}


id: PBO:0044244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cut like homeobox 1","termid":"PBO:0044244"}


id: FYPO:0002675
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dTDP measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular dTDP level","synonyms":[{"name":"increased cellular dTDP level during mitotic cell cycle","type":"related"},{"name":"increased cellular dTDP level during vegetative growth","type":"exact"},{"name":"increased dTDP accumulation","type":"related"}],"termid":"FYPO:0002675"}


id: PBO:0002405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-O ortholog Mal2","termid":"PBO:0002405"}


id: GO:0009998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from specifying into a retinal cone cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of retinal cone cell fate specification","termid":"GO:0042673"},{"relation_name":"is_a","term_name":"negative regulation of retinal cone cell fate commitment","termid":"GO:0060226"},{"relation_name":"negatively_regulates","term_name":"retinal cone cell fate specification","termid":"GO:0042672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of retinal cone cell fate specification","synonyms":[{"name":"down regulation of retinal cone cell fate specification","type":"exact"},{"name":"down-regulation of retinal cone cell fate specification","type":"exact"},{"name":"downregulation of retinal cone cell fate specification","type":"exact"},{"name":"inhibition of retinal cone cell fate specification","type":"narrow"},{"name":"negative regulation of retina cone cell fate specification","type":"exact"},{"name":"suppression of retina cone cell fate","type":"exact"},{"name":"suppression of retinal cone cell fate","type":"exact"}],"termid":"GO:0009998"}


id: PBO:0111832
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C5HC2 type","termid":"PBO:0111832"}


id: MOD:01589
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(2,4-diacetamido-2,4-dideoxyglucosyl)-L-serine.","definition_xrefs":["PubMed:16949362","PubMed:15249686","RESID:AA0499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-(2,4-diacetamido-2,4-dideoxyglucosyl)-L-serine","synonyms":[{"name":"(2S)-2-amino-3-[(2,4-diacetamido-2,4-dideoxy-beta-D-glucopyranosyl)oxy]propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (DADDGlc) serine","type":"exact"},{"name":"DADDGlc","type":"exact"},{"name":"O-(2,4-diacetamido-2,4-dideoxy-D-glucosyl)-L-serine","type":"exact"},{"name":"O-(2,4-diacetamido-2,4-dideoxy-beta-D-glucopyranosyl)-L-serine","type":"exact"},{"name":"O-[2,4-bis(acetylamino)]glucosyl-L-serine","type":"exact"},{"name":"O-seryl-beta-2,4-bis(acetylamino)glucoside","type":"exact"},{"name":"O3-(2,4-diacetamido-2,4-dideoxy-beta-D-glucopyranosyl)-L-serine","type":"exact"}],"termid":"MOD:01589"}


id: MONDO:0008633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intermediate form of cryopyrin-associated periodic syndrome (CAPS) and is characterized by recurrent fever (with malaise and chills), recurrent urticaria-like skin rash, sensorineural deafness, general signs of inflammation (eye redness, headaches, arthralgia/myalgia) and potentially life-threatening secondary amyloidosis (AA type).","definition_xrefs":["Orphanet:575"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"cryopyrin-associated periodic syndrome","termid":"MONDO:0016168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005046"],"is_obsolete":false,"name":"Muckle-Wells syndrome","secondary_identifiers":["GARD:8472","NANDO:2201067","NORD:1459","NCIT:C119054","SCTID:402417009","UMLS:C0268390","icd11.foundation:1983358487","DOID:0050854","ICD9:708.8","MedDRA:10064569","NANDO:1200467","OMIM:191900","MEDGEN:120634"],"synonyms":[{"name":"Cryopyrin-associated periodic syndrome 2","type":"related"},{"name":"MUCKLE-Wells syndrome","type":"related"},{"name":"MWS","type":"related"},{"name":"Muckle Wells syndrome","type":"related"},{"name":"Muckle-Wells syndrome","type":"exact"},{"name":"Uda syndrome","type":"related"},{"name":"neutrophilic urticaria","type":"exact"},{"name":"urticaria, deafness and amyloidosis","type":"related"},{"name":"urticaria-deafness-amyloidosis syndrome","type":"related"}],"termid":"MONDO:0008633","xrefs":{"Monarch":{"xref_id":"0008633"}}}


id: PBO:0063235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha cluster, complex locus","termid":"PBO:0063235"}


id: PBO:0089769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2-type spliceosomal complex ATPase Cwf11","termid":"PBO:0089769"}


id: PBO:0040039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic residue methyltransferase 1","termid":"PBO:0040039"}


id: MONDO:0019481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete follicular dendritic cell sarcoma (obsolete MONDO:0019481)","termid":"MONDO:0019481","xrefs":{"Monarch":{"xref_id":"0019481"}}}


id: GO:0003206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cardiac chamber is generated and organized. A cardiac chamber is an enclosed cavity within the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"},{"relation_name":"part_of","term_name":"cardiac chamber development","termid":"GO:0003205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac chamber morphogenesis","synonyms":[{"name":"heart chamber morphogenesis","type":"exact"}],"termid":"GO:0003206"}


id: GO:0033797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 e(-) + 2 H+ + selenate = H2O + selenite.","definition_xrefs":["RHEA:14029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"selenate reductase activity","secondary_identifiers":["MetaCyc:RXN0-2101","EC:1.97.1.9","UM-BBD_reactionID:r0828","KEGG_REACTION:R07229"],"synonyms":[{"name":"selenite:reduced acceptor oxidoreductase activity","type":"related"}],"termid":"GO:0033797"}


id: GO:0070414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving trehalose that occur as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.","definition_xrefs":["GOC:mah","GOC:jp","PMID:9797333"],"gene_count":0,"genotype_count":0,"name":"obsolete trehalose metabolism in response to heat stress (obsolete GO:0070414)","synonyms":[{"name":"trehalose metabolic process involved in response to heat stress","type":"exact"}],"termid":"GO:0070414"}


id: PBO:0116697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEIL1 antisense RNA 1","termid":"PBO:0116697"}


id: GO:1901809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of capsanthin.","definition_xrefs":["PMID:10995282","GOC:yaf","MetaCyc:PWY-5174","GOC:TermGenie","UniPathway:UPA00806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll biosynthetic process","termid":"GO:0016123"},{"relation_name":"is_a","term_name":"capsanthin metabolic process","termid":"GO:1901807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"capsanthin biosynthetic process","synonyms":[{"name":"capsanthin anabolism","type":"exact"},{"name":"capsanthin biosynthesis","type":"exact"},{"name":"capsanthin formation","type":"exact"},{"name":"capsanthin synthesis","type":"exact"}],"termid":"GO:1901809"}


id: GO:0060508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features of a mature basal cell found in the lung. Differentiation includes the processes involved in commitment of a cell to a specific fate. A basal cell is an epithelial stem cell.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung cell differentiation","termid":"GO:0060479"},{"relation_name":"part_of","term_name":"lung epithelium development","termid":"GO:0060428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung basal cell differentiation","synonyms":[{"name":"pulmonary basal cell differentiation","type":"broad"}],"termid":"GO:0060508"}


id: PBO:0082622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of both the Rpd3S and Rpd3L histone deacetylase complexes; involved in transcriptional repression and activation of diverse processes, including mating-type switching and meiosis; involved in the maintenance of chromosomal integrity","termid":"PBO:0082622"}


id: PBO:0078350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 16-1","termid":"PBO:0078350"}


id: GO:2000242
data:
  {"annotated_genes":["SJAG_01330","SJAG_02771","SJAG_03048","SJAG_02592","SJAG_02444","SJAG_02773","SJAG_04312","SJAG_00990","SJAG_04287","SJAG_00145","SJAG_03854","SJAG_02730","SJAG_02723","SJAG_01401","SJAG_02921","SJAG_04026","SJAG_03081","SJAG_01837","SJAG_02426","SJAG_00975","SJAG_01311","SJAG_04394","SJAG_01084","SJAG_00526","SJAG_02481","SJAG_01754","SJAG_01515","SJAG_03327","SJAG_04140","SJAG_00600","SJAG_00472","SJAG_01919","SJAG_00364","SJAG_01254","SJAG_02266","SJAG_01680","SJAG_04259","SJAG_01699","SJAG_03438","SJAG_01082","SJAG_04126","SJAG_04682","SJAG_04280","SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108271,116496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[108571,93309,118060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[116259,90928,108572,118061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[77147,118675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[113184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[118570,90674,103552,104297,106862,67142,98298,61384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031138"},{"annotations":[97060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140538"},{"annotations":[80374,72443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110031"},{"annotations":[90065,107761,107858,106441,110985,117536,96255,102465,96113,108803,93288,94809,118072,108607,116469,108453,103780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010515"},{"annotations":[118386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051447"},{"annotations":[100606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[95204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090029"},{"annotations":[109933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[115782],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[103269],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of reproductive process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"negatively_regulates","term_name":"reproductive process","termid":"GO:0022414"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00266":null,"SJAG_00364":null,"SJAG_00472":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00975":null,"SJAG_00990":null,"SJAG_01082":null,"SJAG_01084":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01330":null,"SJAG_01401":null,"SJAG_01515":null,"SJAG_01680":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_01837":null,"SJAG_01919":null,"SJAG_02266":null,"SJAG_02426":null,"SJAG_02444":null,"SJAG_02481":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02771":null,"SJAG_02773":null,"SJAG_02921":null,"SJAG_03048":null,"SJAG_03081":null,"SJAG_03327":null,"SJAG_03438":null,"SJAG_03854":null,"SJAG_04026":null,"SJAG_04126":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04312":null,"SJAG_04394":null,"SJAG_04682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of reproductive process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:2000242","terms_by_termid":{"GO:0010515":null,"GO:0031138":null,"GO:0033315":null,"GO:0033316":null,"GO:0045128":null,"GO:0051447":null,"GO:0051598":null,"GO:0075297":null,"GO:0090029":null,"GO:0110031":null,"GO:0140538":null,"GO:1902103":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: GO:0080062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-alkylaminopurine + UDP-D-glucose = 6-alkylamino-9-beta-D-glucosylpurine + H+ + UDP. This reaction is an N-glucosylation event.","definition_xrefs":["PMID:15342621","KEGG_REACTION:R08369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"cytokinin 9-beta-glucosyltransferase activity","termid":"GO:0080062"}


id: MOD:01071
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a diphenylmethyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphenylmethyl modified residue","synonyms":[{"name":"Dpm","type":"exact"}],"termid":"MOD:01071"}


id: GO:0016065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The specific immune response mediated by antibodies. As in, but not restricted to, the taxon Protostomia (Protostomia, ncbi_taxonomy_id:33317).","definition_xrefs":["GOC:add","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete humoral defense mechanism (sensu Protostomia) (obsolete GO:0016065)","synonyms":[{"name":"humoral defence mechanism (sensu Protostomia)","type":"exact"},{"name":"humoral defense mechanism (sensu Protostomia)","type":"exact"}],"termid":"GO:0016065"}


id: PBO:0050745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 7","termid":"PBO:0050745"}


id: PBO:0071163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 2","termid":"PBO:0071163"}


id: GO:1905156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of photosynthesis.","definition_xrefs":["GO_REF:0000058","PMID:7592491","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of photosynthesis","termid":"GO:0010109"},{"relation_name":"negatively_regulates","term_name":"photosynthesis","termid":"GO:0015979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of photosynthesis","synonyms":[{"name":"down regulation of photosynthesis","type":"exact"},{"name":"down-regulation of photosynthesis","type":"exact"},{"name":"downregulation of photosynthesis","type":"exact"},{"name":"inhibition of photosynthesis","type":"narrow"}],"termid":"GO:1905156"}


id: MONDO:0957564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital smooth muscle hamartoma, with or without hemihypertrophy","secondary_identifiers":["MEDGEN:1847218","OMIM:620470","UMLS:C5882676"],"termid":"MONDO:0957564","xrefs":{"Monarch":{"xref_id":"0957564"}}}


id: PBO:0086756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; proposed to be an inactive evolutionary remnant that along with neighboring gene YOL163W may have constituted a second sulfonate transporter and SOA1 paralog that is intact in S. uvarum, S. eubayanus and S. arboricola and named SOA2; member of the Dal5p subfamily of the major facilitator family","termid":"PBO:0086756"}


id: MONDO:0007805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypotrichosis in which the cause of the disease is a mutation in the CDSN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"},{"relation_name":"is_a","term_name":"hypotrichosis simplex of the scalp","termid":"MONDO:0019575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis 2","secondary_identifiers":["MESH:C564143","GARD:18093","MEDGEN:374435","UMLS:C1840299","DOID:0110699","OMIM:146520"],"synonyms":[{"name":"CDSN hypotrichosis","type":"exact"},{"name":"HYPT2","type":"exact"},{"name":"Htss","type":"related"},{"name":"Spanish type hypotrichosis","type":"exact"},{"name":"hypotrichosis 2","type":"exact"},{"name":"hypotrichosis caused by mutation in CDSN","type":"exact"},{"name":"hypotrichosis simplex of the scalp 1","type":"exact"},{"name":"hypotrichosis type 2","type":"exact"},{"name":"hypotrichosis, Spanish type","type":"related"},{"name":"hypt2","type":"exact"}],"termid":"MONDO:0007805","xrefs":{"Monarch":{"xref_id":"0007805"}}}


id: MONDO:0010988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aplasia cutis-myopia syndrome is characterized by the association of aplasia cutis congenita with high myopia, congenital nystagmus and cone-rod dysfunction. It has been described in two siblings (brother and sister). Transmission is autosomal dominant.","definition_xrefs":["Orphanet:1117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aplasia cutis congenita","termid":"MONDO:0007145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"aplasia cutis-myopia syndrome","secondary_identifiers":["SCTID:720499004","GARD:756","OMIM:601075","MESH:C563394","UMLS:C1832826","MEDGEN:331375"],"synonyms":[{"name":"Gershoni-Baruch-Leibo syndrome","type":"exact"},{"name":"aplasia cutis congenita, high myopia, and cone-rod dysfunction","type":"related"},{"name":"aplasia cutis myopia","type":"exact"}],"termid":"MONDO:0010988","xrefs":{"Monarch":{"xref_id":"0010988"}}}


id: PATO:0000754
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000754 startle response (obsolete PATO:0000754)","termid":"PATO:0000754"}


id: GO:1990302
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex consisting of Bre1 and Rad6 that mediates monoubiquitination of histone H2B to form H2BK123ub1. H2BK123ub1 gives a specific tag for epigenetic transcriptional activation, elongation by RNA polymerase II, telomeric silencing, and is also a prerequisite for H3K4me and H3K79me formation. It thereby plays a central role in histone code and gene regulation. It also modulates the formation of double-strand breaks during meiosis.","definition_xrefs":["PMID:19531475","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Bre1-Rad6 ubiquitin ligase complex","synonyms":[{"name":"Bre1-Rad6 complex","type":"exact"}],"termid":"GO:1990302"}


id: PBO:0038623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylcholinesterase (Cartwright blood group)","termid":"PBO:0038623"}


id: MONDO:0018276
data:
  {"annotated_genes":["SJAG_03188","SJAG_00831","SJAG_05219","SJAG_04053","SJAG_01491","SJAG_04316"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012248"},{"annotations":[88503,88502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013162"},{"annotations":[87771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014142"},{"annotations":[87114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014023"},{"annotations":[86984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013049"},{"annotations":[87676,87677,87678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009364"},{"annotations":[87764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014140"},{"annotations":[88496,88497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013154"},{"annotations":[87074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033556"},{"annotations":[88501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013159"},{"annotations":[87769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014141"},{"annotations":[88500,88499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013160"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00831":null,"SJAG_01491":null,"SJAG_03188":null,"SJAG_04053":null,"SJAG_04316":null,"SJAG_05219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:12584","DOID:0112374","MEDGEN:1842215","Orphanet:370953","UMLS:C5679911"],"synonyms":[{"name":"CMD due to dystroglycanopathy","type":"exact"},{"name":"congenital muscular dystrophy due to dystroglycanopathy","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy","type":"exact"}],"termid":"MONDO:0018276","terms_by_termid":{"MONDO:0009364":null,"MONDO:0012248":null,"MONDO:0013049":null,"MONDO:0013154":null,"MONDO:0013159":null,"MONDO:0013160":null,"MONDO:0013162":null,"MONDO:0014023":null,"MONDO:0014140":null,"MONDO:0014141":null,"MONDO:0014142":null,"MONDO:0033556":null},"xrefs":{"Monarch":{"xref_id":"0018276"}}}


id: GO:0002492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a peptide antigen to the antigen binding groove of an MHC class Ib protein complex. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family.","definition_xrefs":["GOC:add","PMID:15928678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide antigen assembly with MHC protein complex","termid":"GO:0002501"},{"relation_name":"part_of","term_name":"MHC class Ib protein complex assembly","termid":"GO:0002398"},{"relation_name":"part_of","term_name":"antigen processing and presentation of peptide antigen via MHC class Ib","termid":"GO:0002428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"peptide antigen assembly with MHC class Ib protein complex","termid":"GO:0002492"}


id: PBO:0076283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYF2 pre-mRNA splicing factor","termid":"PBO:0076283"}


id: MONDO:0008680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary Wilms tumor","termid":"MONDO:0003321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"Wilms tumor 2","secondary_identifiers":["GARD:8559","UMLS:C3887743","OMIM:194071","MESH:C536853","MEDGEN:854562","OMIM:605982"],"synonyms":[{"name":"FWT2","type":"related"},{"name":"WT2","type":"related"},{"name":"Wilms tumor 2","type":"exact"},{"name":"Wilms tumor 2, autosomal dominant, somatic mutation","type":"exact"},{"name":"Wilms tumor type 2","type":"exact"},{"name":"Wilms tumour 2, autosomal dominant, somatic mutation","type":"exact"},{"name":"Wilms tumour type 2","type":"exact"},{"name":"familial Wilms tumor 2","type":"related"},{"name":"familial Wilms tumour 2","type":"related"}],"termid":"MONDO:0008680","xrefs":{"Monarch":{"xref_id":"0008680"}}}


id: PBO:0042781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 112","termid":"PBO:0042781"}


id: GO:0015910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a long-chain fatty acid into a peroxisome. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid transport","termid":"GO:0015909"},{"relation_name":"is_a","term_name":"peroxisomal membrane transport","termid":"GO:0015919"},{"relation_name":"is_a","term_name":"intracellular lipid transport","termid":"GO:0032365"},{"relation_name":"is_a","term_name":"fatty acid transmembrane transport","termid":"GO:1902001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"long-chain fatty acid import into peroxisome","synonyms":[{"name":"peroxisomal long-chain fatty acid import","type":"exact"},{"name":"peroxisomal long-chain fatty acid uptake","type":"exact"}],"termid":"GO:0015910"}


id: PBO:0082936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic ATP-dependent RNA helicase of the DEAD-box family; involved in mRNA export from the nucleus, remodeling messenger ribonucleoprotein particles (mRNPs), with ATPase activity stimulated by Gle1p, IP6 and Nup159p; involved in translation termination along with Sup45p (eRF1); role in the cellular response to heat stress","termid":"PBO:0082936"}


id: GO:0061330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a Malpighian tubule stellate cell. A Malpighian tubule stellate cell is a specialized epithelial secretory cell that moves chloride ions and water across the tubule epithelium.","definition_xrefs":["PMID:19783135","GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"part_of","term_name":"Malpighian tubule development","termid":"GO:0072002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Malpighian tubule stellate cell differentiation","termid":"GO:0061330"}


id: PBO:0056051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LUC7 like","termid":"PBO:0056051"}


id: GO:0001535
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex forming portion of the radial spoke that is orthogonal to the elongated stalk and which projects towards the central pair of microtubules within the ciliary or flagellum axoneme.","definition_xrefs":["PMID:22754630","GOC:krc","PMID:34871179","GOC:hjd","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"radial spoke","termid":"GO:0001534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"radial spoke head","synonyms":[{"name":"radial spokehead","type":"exact"}],"termid":"GO:0001535"}


id: PBO:0061853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin 3","termid":"PBO:0061853"}


id: MONDO:0007782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperthermia, cutaneous, with headaches and nausea","secondary_identifiers":["MEDGEN:374453","UMLS:C1840373","OMIM:145590","MESH:C564156"],"synonyms":[{"name":"farmer syndrome","type":"related"},{"name":"hyperthermia, cutaneous, with headaches and nausea","type":"exact"}],"termid":"MONDO:0007782","xrefs":{"Monarch":{"xref_id":"0007782"}}}


id: PR:O74385
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id: GO:0072538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response which is associated with resistance to intracellular bacteria with a key role in inflammation and tissue injury. This immune response is associated with pathological autoimmune conditions such as multiple sclerosis, arthritis and psoriasis which is typically orchestrated by the production of particular cytokines by T-helper 17 cells, most notably interleukin-17, IL-21 and IL-22.","definition_xrefs":["GOC:ebc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 17 type immune response","synonyms":[{"name":"Th17 immune response","type":"exact"}],"termid":"GO:0072538"}


id: GO:0031460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of glycine betaine, N-trimethylglycine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amino-acid betaine transport","termid":"GO:0015838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"glycine betaine transport","synonyms":[{"name":"N-trimethylglycine transport","type":"exact"}],"termid":"GO:0031460"}


id: GO:0160205
data:
  {"annotated_genes":["SJAG_00827"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62154],"is_not":false,"summary":null,"term":"GO:0160205"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: [ADP-thiazole synthase]-L-cysteine + glycine + NAD(+) = [ADP-thiazole synthase]-dehydroalanine + ADP-5-ethyl-4-methylthiazole-2-carboxylate + 2 H(+) + 3 H2O + nicotinamide.","definition_xrefs":["RHEA:55708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"cysteine-dependent adenosine diphosphate thiazole synthase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:2.4.2.60"],"synonyms":[{"name":"ADP-thiazole synthase activity","type":"related"},{"name":"suicide thiamine thiazole synthase activity","type":"exact"}],"termid":"GO:0160205","terms_by_termid":{"GO:0160205":null}}


id: PBO:0028757
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_G1_phase_entry_during_cellular_response_to_ionizing_radiation","termid":"PBO:0028757"}


id: GO:0033729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a flavan-3-ol + 2 NAD(P)+ = an anthocyanidin + 2 NAD(P)H + H+.","definition_xrefs":["EC:1.3.1.77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"anthocyanidin reductase activity","secondary_identifiers":["MetaCyc:RXN-10693"],"synonyms":[{"name":"ANR","type":"related"},{"name":"AtANR","type":"related"},{"name":"MtANR","type":"related"},{"name":"flavan-3-ol:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0033729"}


id: PBO:0047033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 98 member A","termid":"PBO:0047033"}


id: MONDO:0009934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare and fatal developmental lung disease characterized by respiratory distress in neonates due to refractory hypoxemia and severe pulmonary arterial hypertension.","definition_xrefs":["Orphanet:210122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary interstitial lung disease specific to childhood","termid":"MONDO:0017015"},{"relation_name":"is_a","term_name":"congenital pulmonary veins anomaly","termid":"MONDO:0020295"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"alveolar capillary dysplasia with misalignment of pulmonary veins","secondary_identifiers":["UMLS:C2960310","GARD:8644","MEDGEN:755478","NCIT:C85006","ICD9:747.49","DOID:13042","ICD9:747.83","MESH:C536590","NORD:759","MedDRA:10054726","NCIT:C98809","OMIM:265380","SCTID:233815004","SCTID:447275002"],"synonyms":[{"name":"ACDMPV","type":"exact"},{"name":"alveolar capillary dysplasia","type":"exact"},{"name":"alveolar capillary dysplasia with misalignment of pulmonary veins","type":"exact"},{"name":"alveolar capillary dysplasia with misalignment of pulmonary veins and Other congenital anomalies","type":"related"},{"name":"alveolar capillary dysplasia with misalignment of pulmonary veins and other congenital anomalies","type":"related"},{"name":"alveolar capillary dysplasia with misalignment of pulmonary vessels","type":"exact"},{"name":"alveolar capillary dysplasia with pulmonary venous misalignment","type":"related"},{"name":"congenital alveolar capillary dysplasia","type":"exact"},{"name":"congenital alveolar capillary dysplasia with misalignment of pulmonary veins","type":"exact"},{"name":"familial persistent pulmonary hypertension of the newborn","type":"related"},{"name":"fetal circulation","type":"exact"},{"name":"foetal circulation","type":"exact"},{"name":"persistent fetal circulation","type":"related"},{"name":"persistent foetal circulation","type":"related"},{"name":"persistent foetal circulation syndrome","type":"related"},{"name":"persistent pulmonary hypertension of the newborn","type":"related"},{"name":"pulmonary hypertension, familial persistent of the newborn","type":"related"}],"termid":"MONDO:0009934","xrefs":{"Monarch":{"xref_id":"0009934"}}}


id: GO:0004192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Specificity similar to, but narrower than, that of pepsin A. Does not cleave the Gln4-His5 bond in the B chain of insulin.","definition_xrefs":["EC:3.4.23.5"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin D activity (obsolete GO:0004192)","synonyms":[{"name":"cathepsin D activity","type":"exact"}],"termid":"GO:0004192"}


id: PBO:0042544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 9","termid":"PBO:0042544"}


id: GO:0044646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of complement activation in the bitten/stung organism.","definition_xrefs":["PMID:20837040","GOC:fj","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in modulation of complement activation in another organism (obsolete GO:0044646)","synonyms":[{"name":"envenomation resulting in modulation of complement activation in other organism","type":"exact"},{"name":"envenomation resulting in regulation of complement activation in other organism","type":"exact"}],"termid":"GO:0044646"}


id: MONDO:0006414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma that arises from the skin. Representative examples include Kaposi sarcoma, angiosarcoma, lymphangiosarcoma, liposarcoma, and leiomyosarcoma.","definition_xrefs":["NCIT:C5585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant dermis tumor","termid":"MONDO:0003363"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"skin sarcoma","secondary_identifiers":["MEDGEN:208989","UMLS:C0856900","EFO:1000531","DOID:2687"],"synonyms":[{"name":"cutaneous sarcoma","type":"exact"},{"name":"sarcoma of skin","type":"exact"},{"name":"sarcoma of the skin","type":"exact"},{"name":"sarcoma of zone of skin","type":"exact"},{"name":"skin sarcoma","type":"exact"},{"name":"zone of skin sarcoma","type":"exact"}],"termid":"MONDO:0006414","xrefs":{"Monarch":{"xref_id":"0006414"}}}


id: PBO:0051007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin (CD79A) binding protein 1 pseudogene 5","termid":"PBO:0051007"}


id: PBO:0061882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte secreted protein family member 4B","termid":"PBO:0061882"}


id: PBO:0049116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 180","termid":"PBO:0049116"}


id: PBO:0056752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"METTL5 pseudogene 3","termid":"PBO:0056752"}


id: GO:0106186
data:
  {"annotated_genes":["SJAG_00368"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[108543],"is_not":false,"summary":null,"term":"GO:0106186"}]},"cv_name":"cellular_component","definition":"The leaflet the plasma membrane at the cell tip that faces the cytoplasm and any proteins embedded or anchored in it or attached to its surface.","definition_xrefs":["PMID:28292899","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of plasma membrane","termid":"GO:0009898"},{"relation_name":"part_of","term_name":"plasma membrane of cell tip","termid":"GO:0031520"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00368":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"cytoplasmic side of plasma membrane, cell tip","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106186","terms_by_termid":{"GO:0106186":null}}


id: GO:0102345
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-3-hydroxylignoceroyl-CoA(4-) = trans-2-tetracosenoyl-CoA + H2O.","definition_xrefs":["EC:4.2.1.134","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-hydroxy-lignoceroyl-CoA dehydratase activity (obsolete GO:0102345)","termid":"GO:0102345"}


id: SO:0000537
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"12 or 23 nucleotide spacer between the V-heptamer and the V-nonamer of a V-gene recombination feature of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_spacer","termid":"SO:0000563"},{"relation_name":"part_of","term_name":"V_gene_recombination_feature","termid":"SO:0000538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_spacer","synonyms":[{"name":"V spacer","type":"exact"},{"name":"V-SPACER","type":"exact"}],"termid":"SO:0000537"}


id: PBO:0033763
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_chromosome_arms","termid":"PBO:0033763"}


id: PBO:0078038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 28","termid":"PBO:0078038"}


id: PBO:0001050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain protein","termid":"PBO:0001050"}


id: GO:1990063
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. In E. coli it is composed of BamABCDE, of the outer membrane protein BamA, and four lipoproteins BamB, BamC, BamD and BamE. BamA interacts directly with BamB and the BamCDE subcomplex.","definition_xrefs":["PMID:20378773","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"periplasmic side of cell outer membrane","termid":"GO:0031241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Bam protein complex","synonyms":[{"name":"OMP complex","type":"exact"}],"termid":"GO:1990063"}


id: GO:0005647
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete importin, alpha-subunit (obsolete GO:0005647)","synonyms":[{"name":"importin, alpha-subunit","type":"exact"},{"name":"karyopherin-alpha","type":"exact"}],"termid":"GO:0005647"}


id: GO:0034654
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id: PBO:0061768
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine decarboxylase antizyme 3","termid":"PBO:0061768"}


id: PBO:0068904
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 146, pseudogene","termid":"PBO:0068904"}


id: GO:1900424
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id: SO:0001302
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_cis_hydroxyisopentenyl_adenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_cis_hydroxyisopentenyl_adenosine","secondary_identifiers":["RNAMOD:008"],"synonyms":[{"name":"N6 cis hydroxyisopentenyl adenosine","type":"exact"},{"name":"N6-(cis-hydroxyisopentenyl)adenosine","type":"exact"},{"name":"io6A","type":"exact"}],"termid":"SO:0001302"}


id: PBO:0040322
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit epsilon pseudogene 1","termid":"PBO:0040322"}


id: MONDO:0003454
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the conjunctiva.","direct_ancestors":[{"relation_name":"is_a","term_name":"ocular cancer","termid":"MONDO:0002236"},{"relation_name":"is_a","term_name":"conjunctival tumor","termid":"MONDO:0020204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"conjunctival cancer","secondary_identifiers":["DOID:5467","MEDGEN:56316","ICD9:190.3","SCTID:363463000","UMLS:C0153628","NCIT:C3564"],"synonyms":[{"name":"cancer of conjunctiva","type":"broad"},{"name":"conjunctiva cancer","type":"exact"},{"name":"conjunctival tumor","type":"broad"},{"name":"conjunctival tumour","type":"broad"},{"name":"malignant conjunctiva neoplasm","type":"exact"},{"name":"malignant conjunctiva tumor","type":"exact"},{"name":"malignant conjunctiva tumour","type":"exact"},{"name":"malignant conjunctival neoplasm","type":"exact"},{"name":"malignant conjunctival tumor","type":"exact"},{"name":"malignant conjunctival tumour","type":"exact"},{"name":"malignant neoplasm of conjunctiva","type":"exact"},{"name":"malignant neoplasm of conjunctiva (primary)","type":"exact"},{"name":"malignant neoplasm of the conjunctiva","type":"exact"},{"name":"malignant tumor of conjunctiva","type":"exact"},{"name":"malignant tumor of the conjunctiva","type":"exact"},{"name":"malignant tumour of conjunctiva","type":"exact"},{"name":"malignant tumour of the conjunctiva","type":"exact"}],"termid":"MONDO:0003454","xrefs":{"Monarch":{"xref_id":"0003454"}}}


id: PR:O94383
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A structural maintenance of chromosomes protein 1A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03319","PANTHER:PTHR18937:SF12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.04","secondary_identifiers":["UniProtKB:O94383"],"synonyms":[{"name":"Spom972h-SMC1A","type":"exact"},{"name":"chromosome segregation protein smc1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cohesin complex subunit psm1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94383"}


id: FYPO:0003609
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of dehydrodolichyl diphosphate synthase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal dehydrodolichyl diphosphate synthase activity","termid":"FYPO:0003608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased dehydrodolichyl diphosphate synthase activity","synonyms":[{"name":"reduced dehydrodolichyl diphosphate synthase activity","type":"exact"}],"termid":"FYPO:0003609"}


id: MONDO:0012169
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 3","secondary_identifiers":["UMLS:C1837008","MESH:C563816","DOID:0080860","MEDGEN:373230","OMIM:608996"],"synonyms":[{"name":"Pof3","type":"related"},{"name":"premature ovarian failure 3","type":"exact"},{"name":"premature ovarian failure type 3","type":"exact"}],"termid":"MONDO:0012169","xrefs":{"Monarch":{"xref_id":"0012169"}}}


id: MONDO:0003102
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete perineurioma (obsolete MONDO:0003102)","termid":"MONDO:0003102","xrefs":{"Monarch":{"xref_id":"0003102"}}}


id: PBO:0064874
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 32","termid":"PBO:0064874"}


id: PBO:0069991
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1286, pseudogene","termid":"PBO:0069991"}


id: GO:0018259
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a covalent cross-link between RNA and a peptidyl-serine residue by the formation of O-(phospho-5'-5NA)-L-serine.","definition_xrefs":["RESID:AA0213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-protein covalent cross-linking","termid":"GO:0018144"},{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA-protein covalent cross-linking via peptidyl-serine","termid":"GO:0018259"}


id: PBO:0061237
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP53 ribosome biogenesis factor","termid":"PBO:0061237"}


id: GO:0090057
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id: FYPO:0001965
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of papulacandin D than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to papulacandin D","synonyms":[{"name":"resistance to papulacandin D during mitotic cell cycle","type":"related"},{"name":"resistance to papulacandin D during vegetative growth","type":"exact"},{"name":"resistant to papulacandin D","type":"exact"}],"termid":"FYPO:0001965"}


id: PBO:0081652
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 577","termid":"PBO:0081652"}


id: PBO:0090519
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen decarboxylase Hem12","termid":"PBO:0090519"}


id: GO:0044388
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a small protein activating enzyme, such as ubiquitin-activating enzyme.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"small protein activating enzyme binding","termid":"GO:0044388"}


id: PBO:0049003
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase 1 like","termid":"PBO:0049003"}


id: PBO:0078343
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 9-1","termid":"PBO:0078343"}


id: MONDO:0020540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neoplasm arising from the ovary. Although it may occur at any age, it is more often seen in young females. Morphologically, it is characterized by a mixture of two cellular populations: well differentiated Sertoli cells and granulosa cells, with the latter constituting at least ten percent of the neoplasm. The vast majority of cases are stage I lesions at presentation and produce either estrogenic or androgenic manifestations. Although it may present as a massive ovarian tumor, it usually follows a benign clinical course. Very rare case reports of testicular lesions morphologically resembling gynandroblastomas are in fact variants of juvenile granulose cell tumor, or Sertoli cell tumor, or a combination of both.","definition_xrefs":["NCIT:C3072"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"malignant sex cord stromal tumor of ovary","termid":"MONDO:0018172"},{"relation_name":"is_a","term_name":"ovarian sex cord-stromal tumor","termid":"MONDO:0021657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian gynandroblastoma","secondary_identifiers":["Orphanet:99914","MEDGEN:83412","UMLS:C0346178","ICDO:8632/1","MESH:C538459","SCTID:254867003","GARD:9665"],"synonyms":[{"name":"Gynandroblastoma","type":"related"},{"name":"Gynandroblastoma of ovary","type":"exact"},{"name":"Gynandroblastoma of the ovary","type":"exact"}],"termid":"MONDO:0020540","xrefs":{"Monarch":{"xref_id":"0020540"}}}


id: GO:0008938
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + nicotinate = N-methylnicotinate + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:20241","EC:2.1.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"nicotinate N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01721","MetaCyc:NICOTINATE-N-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:nicotinate N-methyltransferase activity","type":"related"},{"name":"furanocoumarin 8-O-methyltransferase activity","type":"related"}],"termid":"GO:0008938"}


id: PBO:0065651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type D","termid":"PBO:0065651"}


id: PBO:0034197
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sends_output_to","termid":"PBO:0034197"}


id: MONDO:0000007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete atypical Mycobacteriosis, familial (obsolete MONDO:0000007)","termid":"MONDO:0000007","xrefs":{"Monarch":{"xref_id":"0000007"}}}


id: GO:0030439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPK during sporulation (sensu Fungi) (obsolete GO:0030439)","synonyms":[{"name":"activation of MAPK during sporulation (sensu Fungi)","type":"exact"}],"termid":"GO:0030439"}


id: GO:0017184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of peptidyl-diphthamide, a modified histidine residue.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-diphthamide catabolic process (obsolete GO:0017184)","synonyms":[{"name":"peptidyl-diphthamide breakdown","type":"exact"},{"name":"peptidyl-diphthamide catabolism","type":"exact"},{"name":"peptidyl-diphthamide degradation","type":"exact"}],"termid":"GO:0017184"}


id: PR:Q9UUE4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptidyl-prolyl cis-trans isomerase-like 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03164","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase cyp6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.05","secondary_identifiers":["UniProtKB:Q9UUE4"],"synonyms":[{"name":"PPIase cyp6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPIL4","type":"exact"},{"name":"rotamase cyp6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUE4"}


id: MONDO:0008182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nasopalpebral lipoma-coloboma-telecanthus syndrome is characterized by nasopalpebral lipomas, bilateral lid coloboma, and telecanthus.","definition_xrefs":["Orphanet:2399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasopalpebral lipoma-coloboma syndrome","secondary_identifiers":["GARD:3927","MESH:C538338","MEDGEN:358378","UMLS:C1868660","OMIM:167730","SCTID:723411003"],"synonyms":[{"name":"NASOPALPEBRAL lipoma-coloboma syndrome","type":"related"},{"name":"NPLCS","type":"related"},{"name":"Nasopalpebral lipoma coloboma syndrome","type":"related"},{"name":"nasopalpebral lipoma-coloboma syndrome","type":"exact"},{"name":"palpebral coloboma lipoma syndrome","type":"related"},{"name":"palpebral coloboma-lipoma syndrome","type":"related"}],"termid":"MONDO:0008182","xrefs":{"Monarch":{"xref_id":"0008182"}}}


id: PBO:0068210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 517","termid":"PBO:0068210"}


id: MONDO:0008989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citrulline transport defect","secondary_identifiers":["UMLS:C1859084","MEDGEN:349092","MESH:C536207","OMIM:215720"],"synonyms":[{"name":"citrulline transport defect","type":"exact"}],"termid":"MONDO:0008989","xrefs":{"Monarch":{"xref_id":"0008989"}}}


id: PATO:0000239
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000239 blinking reflex (obsolete PATO:0000239)","termid":"PATO:0000239"}


id: PBO:0075588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor, Kunitz type 1","termid":"PBO:0075588"}


id: GO:1900631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tridecane.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkane metabolic process","termid":"GO:0043446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tridecane metabolic process","synonyms":[{"name":"tridecane metabolism","type":"exact"}],"termid":"GO:1900631"}


id: GO:0018620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + phthalate = cis-4,5-dihydroxycyclohexa-2,6-diene-1,2-dicarboxylate + NAD+.","definition_xrefs":["RHEA:17489","EC:1.14.12.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phthalate 4,5-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R03630","MetaCyc:PHTHALATE-45-DIOXYGENASE-RXN","UM-BBD_reactionID:r0102"],"synonyms":[{"name":"PDO activity","type":"related"},{"name":"phthalate dioxygenase activity","type":"broad"},{"name":"phthalate,NADH:oxygen oxidoreductase (4,5-hydroxylating)","type":"related"}],"termid":"GO:0018620"}


id: PBO:0058373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4745","termid":"PBO:0058373"}


id: GO:0046621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of growth of an organ of an organism.","definition_xrefs":["GOC:tb","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organ growth","termid":"GO:0046620"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"organ growth","termid":"GO:0035265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of organ growth","termid":"GO:0046621"}


id: PBO:0043417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCHC-type zinc finger nucleic acid binding protein","termid":"PBO:0043417"}


id: GO:0071969
data:
  {"annotated_genes":["SJAG_01835","SJAG_01290","SJAG_03587","SJAG_04483","SJAG_02222","SJAG_01288","SJAG_05285","SJAG_04666","SJAG_00218","SJAG_00876","SJAG_04771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[77632,76281,108058,93480,72816,74762,115155,117822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[89369,94302],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds, found in the walls of fungi.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall (1->3)-beta-D-glucan metabolic process","termid":"GO:0034407"},{"relation_name":"is_a","term_name":"fungal-type cell wall beta-glucan metabolic process","termid":"GO:0070879"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044085","GO:0071554"],"is_obsolete":false,"name":"fungal-type cell wall (1->3)-beta-D-glucan metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"fungal-type cell wall 1,3-beta-D-glucan metabolic process","type":"exact"},{"name":"fungal-type cell wall 1,3-beta-glucan metabolism","type":"exact"},{"name":"fungal-type cell wall beta-1,3 glucan metabolic process","type":"exact"},{"name":"fungal-type cell wall beta-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0071969","terms_by_termid":{"GO:0034413":null,"GO:0071970":null,"GO:0140748":null}}


id: PBO:0090454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (CK1 family) Cki2","termid":"PBO:0090454"}


id: PBO:0043268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin domain containing 1","termid":"PBO:0043268"}


id: MONDO:0017145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"},{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"beta-thalassemia and related diseases","secondary_identifiers":["MEDGEN:1826095","GARD:21023","Orphanet:275749","UMLS:C5680748"],"termid":"MONDO:0017145","xrefs":{"Monarch":{"xref_id":"0017145"}}}


id: MONDO:1012962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cataract that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cataract, non-human animal","termid":"MONDO:1012962","xrefs":{"Monarch":{"xref_id":"1012962"}}}


id: PBO:0058741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6865","termid":"PBO:0058741"}


id: PBO:0069124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 374, pseudogene","termid":"PBO:0069124"}


id: PBO:0082372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic leucine zipper (bZIP) transcription factor; physically interacts with the Tup1-Cyc8 complex and recruits Tup1p to its targets; overexpression increases sodium and lithium tolerance; computational analysis suggests a role in regulation of expression of genes involved in carbohydrate metabolism; YAP6 has a paralog, CIN5, that arose from the whole genome duplication","termid":"PBO:0082372"}


id: SO:0001868
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A candidate gene whose association with a trait is based on the gene's location on a chromosome.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"candidate_gene","termid":"SO:0001867"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positional_candidate_gene","synonyms":[{"name":"positional candidate gene","type":"exact"},{"name":"positional target gene","type":"related"}],"termid":"SO:0001868"}


id: PBO:0043867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cereblon","termid":"PBO:0043867"}


id: MONDO:0007231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachytelephalangy - dysmorphism - Kallmann syndrome is a developmental anomaly characterized by brachytelephalangy, distinct craniofacial features (prominent square forehead, telecanthus, small nose, malar hypoplasia, smooth philtrum and thin upper lip), and relative to other family members, a short stature. These features may be associated with anosmia and hypogonadotropic hypogonadism (considered as Kallman syndrome). Brachytelephalangy - dysmorphism - Kallmann syndrome has been described in a mother and her son and there have been no further descriptions in the literature since 1986.","definition_xrefs":["Orphanet:1295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"brachytelephalangy-dysmorphism-Kallmann syndrome","secondary_identifiers":["MESH:C537101","OMIM:113480","UMLS:C2931421","GARD:16562","MEDGEN:444052"],"synonyms":[{"name":"BRACHYTELEPHALANGY with characteristic facies and Kallmann syndrome","type":"related"}],"termid":"MONDO:0007231","xrefs":{"Monarch":{"xref_id":"0007231"}}}


id: GO:0001970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the activation of the membrane attack complex components of the complement cascade.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of activation of membrane attack complex","termid":"GO:0001969"},{"relation_name":"is_a","term_name":"positive regulation of complement activation","termid":"GO:0045917"},{"relation_name":"positively_regulates","term_name":"activation of membrane attack complex","termid":"GO:0001905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of activation of membrane attack complex","synonyms":[{"name":"activation of activation of membrane attack complex","type":"narrow"},{"name":"positive regulation of MAC assembly","type":"exact"},{"name":"positive regulation of MAC formation","type":"exact"},{"name":"positive regulation of activation of MAC","type":"exact"},{"name":"positive regulation of activation of TCC","type":"narrow"},{"name":"positive regulation of activation of terminal complement complex","type":"narrow"},{"name":"positive regulation of activation of the terminal complement cascade","type":"narrow"},{"name":"positive regulation of membrane attack complex assembly","type":"exact"},{"name":"positive regulation of membrane attack complex formation","type":"exact"},{"name":"stimulation of activation of membrane attack complex","type":"narrow"},{"name":"up regulation of activation of membrane attack complex","type":"exact"},{"name":"up-regulation of activation of membrane attack complex","type":"exact"},{"name":"upregulation of activation of membrane attack complex","type":"exact"}],"termid":"GO:0001970"}


id: MONDO:0004585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An excess quantity of amniotic fluid in the amniotic sac as compared to normal values. Typically associated with an amniotic fluid index (AFI) of greater than or equal to 25 cm or a single maximum vertical pocket (MVP) of greater than 8 cm.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"placenta disorder","termid":"MONDO:0005917"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyhydramnios","secondary_identifiers":["ICD9:657.00","MEDGEN:6936","UMLS:C0020224","HP:0001561","MESH:D006831","ICD9:657.0","DOID:8488","SCTID:86203003","ICD9:657"],"synonyms":[{"name":"polyhydramnios","type":"exact"},{"name":"polyhydramnios (disease)","type":"exact"}],"termid":"MONDO:0004585","xrefs":{"Monarch":{"xref_id":"0004585"}}}


id: GO:0090047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription regulator activity, any molecular function that plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor.","definition_xrefs":["GOC:BHF","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription regulator activity (obsolete GO:0090047)","synonyms":[{"name":"positive regulation of transcription regulator activity","type":"exact"}],"termid":"GO:0090047"}


id: PBO:0087751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the transmembrane ring of the nuclear pore complex (NPC); contributes to nucleocytoplasmic transport, NPC biogenesis and spindle pole body duplication","termid":"PBO:0087751"}


id: PBO:0031718
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_genome_maintenance","termid":"PBO:0031718"}


id: GO:0019320
data:
  {"annotated_genes":["SJAG_03660","SJAG_01310","SJAG_02009","SJAG_02135","SJAG_02796","SJAG_06621","SJAG_06622","SJAG_03818","SJAG_02954","SJAG_04192","SJAG_00839","SJAG_02950","SJAG_02945","SJAG_03903","SJAG_04495","SJAG_02107","SJAG_03373","SJAG_02369","SJAG_03828","SJAG_00605","SJAG_00461","SJAG_02951","SJAG_00027","SJAG_04334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111367,79617,74194,107775,111366,105315,118354,107404,107405,111371,111368,105573,96420,100178,107403,107774,111365,111370,99907,111369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[115715,115708,115726,115714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033499"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of hexose, any monosaccharide with a chain of six carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"},{"relation_name":"is_a","term_name":"monosaccharide catabolic process","termid":"GO:0046365"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_02950":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03818":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"hexose catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"hexose breakdown","type":"exact"},{"name":"hexose catabolism","type":"exact"},{"name":"hexose degradation","type":"exact"}],"termid":"GO:0019320","terms_by_termid":{"GO:0033499":null,"GO:0061621":null}}


id: PATO:0001561
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process inhering in a bearer by virtue of the bearer's having additional processual parts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extra or missing processual parts","termid":"PATO:0001564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"having extra processual parts","synonyms":[{"name":"having supernumerary processual parts","type":"exact"}],"termid":"PATO:0001561"}


id: PBO:0048797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha q","termid":"PBO:0048797"}


id: PBO:0072697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUN and SH3 domain containing 2","termid":"PBO:0072697"}


id: PBO:0058210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4502","termid":"PBO:0058210"}


id: PBO:0048686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glioblastoma down-regulated RNA","termid":"PBO:0048686"}


id: PBO:0043643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 5","termid":"PBO:0043643"}


id: PBO:0117418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 13","termid":"PBO:0117418"}


id: PBO:0038802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM7, ADAMDEC1 and ADAM28 antisense RNA 1","termid":"PBO:0038802"}


id: PBO:0038394
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_in_presence_of","termid":"PBO:0038394"}


id: PBO:0072489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 18","termid":"PBO:0072489"}


id: PBO:0078670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 3-5","termid":"PBO:0078670"}


id: PBO:0078632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trio Rho guanine nucleotide exchange factor","termid":"PBO:0078632"}


id: PBO:0114138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine deaminase Dea3","termid":"PBO:0114138"}


id: GO:1900993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of (-)-secologanin.","definition_xrefs":["GOC:yaf","UniPathway:UPA00328","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete (-)-secologanin catabolic process (obsolete GO:1900993)","synonyms":[{"name":"(-)-secologanin breakdown","type":"exact"},{"name":"(-)-secologanin catabolism","type":"exact"},{"name":"(-)-secologanin degradation","type":"exact"}],"termid":"GO:1900993"}


id: GO:1900292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of galactotriose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of galactotriose transport","termid":"GO:1900291"},{"relation_name":"negatively_regulates","term_name":"galactotriose transport","termid":"GO:2001093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of galactotriose transport","synonyms":[{"name":"down regulation of galactotriose transport","type":"exact"},{"name":"down-regulation of galactotriose transport","type":"exact"},{"name":"downregulation of galactotriose transport","type":"exact"},{"name":"inhibition of galactotriose transport","type":"narrow"}],"termid":"GO:1900292"}


id: MONDO:1011228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Entropion that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entropion, non-human animal","termid":"MONDO:1010323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"entropion, pig","secondary_identifiers":["OMIA:000337-9823"],"termid":"MONDO:1011228","xrefs":{"Monarch":{"xref_id":"1011228"}}}


id: MONDO:0021290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the vermiform appendix.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendix carcinoma","termid":"MONDO:0003196"},{"relation_name":"is_a","term_name":"carcinoma in situ of cecum","termid":"MONDO:0021289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"carcinoma in situ of appendix","secondary_identifiers":["MEDGEN:83853","NCIT:C4593","icd11.foundation:1098804908","SCTID:92539008","UMLS:C0347125"],"synonyms":[{"name":"carcinoma in situ of the appendix","type":"exact"},{"name":"carcinoma in situ of vermiform appendix","type":"exact"},{"name":"stage 0 appendix cancer","type":"exact"},{"name":"stage 0 appendix carcinoma","type":"exact"},{"name":"stage 0 appendix carcinoma aJCC v7","type":"exact"},{"name":"stage 0 vermiform appendix carcinoma","type":"exact"},{"name":"vermiform appendix carcinoma in situ","type":"exact"},{"name":"vermiform appendix in situ carcinoma","type":"exact"}],"termid":"MONDO:0021290","xrefs":{"Monarch":{"xref_id":"0021290"}}}


id: MONDO:0008141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ossicular malformations, familial","secondary_identifiers":["OMIM:165680","UMLS:C1833790","MEDGEN:371652","MESH:C537142"],"synonyms":[{"name":"familial middle ear ossicular anomalies","type":"related"},{"name":"familial ossicular malformations","type":"related"},{"name":"ossicular malformations, familial","type":"exact"}],"termid":"MONDO:0008141","xrefs":{"Monarch":{"xref_id":"0008141"}}}


id: GO:0050123
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acyl-D-mannosamine + NAD+ = N-acyl-D-mannosaminolactone + H+ + NADH.","definition_xrefs":["EC:1.1.1.233","RHEA:11540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-acylmannosamine 1-dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R02651","MetaCyc:N-ACYLMANNOSAMINE-1-DEHYDROGENASE-RXN"],"synonyms":[{"name":"N-acetyl-D-mannosamine dehydrogenase activity","type":"related"},{"name":"N-acyl-D-mannosamine dehydrogenase activity","type":"related"},{"name":"N-acyl-D-mannosamine:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"N-acylmannosamine dehydrogenase activity","type":"related"}],"termid":"GO:0050123"}


id: PBO:0026953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_equatorial_microtubule_organizing_center_during_vegetative_growth","termid":"PBO:0026953"}


id: GO:0044782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cilium, a specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole.","definition_xrefs":["GOC:jl","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cilium organization","synonyms":[{"name":"microtubule-based flagellum organization","type":"exact"}],"termid":"GO:0044782"}


id: PBO:0050736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 22","termid":"PBO:0050736"}


id: GO:0032865
data:
  {"annotated_genes":["SJAG_04370","SJAG_01929","SJAG_03710","SJAG_03416","SJAG_01305"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71698,71741,76534,81857,118619],"is_not":false,"summary":null,"term":"GO:0032865"}]},"cv_name":"cellular_component","definition":"A protein complex that links the endoplasmic reticulum with mitochondria and may have a role in promoting exchange of calcium and phospholipids between the two organelles.","definition_xrefs":["PMID:19556461","PMID:29279306","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer mitochondrial membrane protein complex","termid":"GO:0098799"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"mitochondria-associated endoplasmic reticulum membrane contact site","termid":"GO:0044233"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01305":null,"SJAG_01929":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_04370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005739","GO:0005783"],"is_obsolete":false,"name":"ERMES complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ER-mitochondria encounter structure","type":"exact"},{"name":"MMM1 complex","type":"exact"},{"name":"Mdm10/Mdm12/Mmm1 complex","type":"exact"},{"name":"mitochore","type":"exact"}],"termid":"GO:0032865","terms_by_termid":{"GO:0032865":null}}


id: GO:0061092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the translocation, or flipping, of phospholipid molecules from one monolayer of a membrane bilayer to the opposite monolayer.","definition_xrefs":["GOC:jh","PMID:19966303","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of phospholipid translocation","termid":"GO:0061091"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid transport","termid":"GO:2001140"},{"relation_name":"positively_regulates","term_name":"phospholipid translocation","termid":"GO:0045332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phospholipid translocation","termid":"GO:0061092"}


id: GO:0106360
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-3-methylhexadecanoyl-CoA = 2-methylpentadecanal + formyl-CoA.","definition_xrefs":["RHEA:25379"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-3-methylhexadecanoyl-CoA lyase activity (obsolete GO:0106360)","termid":"GO:0106360"}


id: PBO:0030131
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_iron_level","termid":"PBO:0030131"}


id: FYECO:0000406
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which valine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ val","synonyms":[{"name":"valine added","type":"exact"}],"termid":"FYECO:0000406"}


id: PBO:0073014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium channel epithelial 1 subunit beta","termid":"PBO:0073014"}


id: PBO:0074043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A25 antisense RNA 1","termid":"PBO:0074043"}


id: PBO:0062095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 45 pseudogene","termid":"PBO:0062095"}


id: MONDO:0014636
data:
  {"annotated_genes":["SJAG_16456"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87062],"is_not":false,"summary":null,"term":"MONDO:0014636"}]},"cv_name":"mondo","definition":"Any combined oxidative phosphorylation deficiency in which the cause of the disease is a mutation in the MARS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_16456":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 25","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111468","OMIM:616430","Orphanet:447954","GARD:17775","MEDGEN:1799165","UMLS:C5567742"],"synonyms":[{"name":"COXPD25","type":"exact"},{"name":"MARS2 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 25","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in MARS2","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 25","type":"exact"}],"termid":"MONDO:0014636","terms_by_termid":{"MONDO:0014636":null},"xrefs":{"Monarch":{"xref_id":"0014636"}}}


id: SO:0000624
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A specific structure at the end of a linear chromosome, required for the integrity and maintenance of the end.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_structural_element","termid":"SO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere","secondary_identifiers":["http://en.wikipedia.org/wiki/Telomere"],"synonyms":[{"name":"INSDC_feature:telomere","type":"exact"},{"name":"telomeric DNA","type":"exact"},{"name":"telomeric sequence","type":"exact"}],"termid":"SO:0000624"}


id: GO:0106126
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a reservosome.","definition_xrefs":["GOC:ach","PMID:22425988","PMID:15521631","PMID:12204365","PMID:18452191","PMID:19288526","PMID:21818313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"reservosome","termid":"GO:0106123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"reservosome membrane","termid":"GO:0106126"}


id: PBO:0080990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 21","termid":"PBO:0080990"}


id: SO:0000800
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A multi-chromosome duplication aberration generated by reassortment of other aberration components.","definition_xrefs":["FB:gm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assortment_derived_variation","termid":"SO:0001504"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assortment_derived_duplication","synonyms":[{"name":"assortment derived duplication","type":"exact"}],"termid":"SO:0000800"}


id: PBO:0027983
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_small_cell_with_abnormal_septum_morphology","termid":"PBO:0027983"}


id: GO:0060562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a tube are generated and organized from an epithelium. Epithelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial tube morphogenesis","termid":"GO:0060562"}


id: GO:0140316
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding directly to sorting signals in the cytosolic tails of transmembrane cargos (or transmembrane cargo receptors serving as recognition interfaces for lumenal cargos), to concentrate them into vesicles or tubules for transport via intracellular vesicular transport or the secretory pathway.","definition_xrefs":["PMID:25795254"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicular transport adaptor activity (obsolete GO:0140316)","termid":"GO:0140316"}


id: GO:0009098
data:
  {"annotated_genes":["SJAG_03985","SJAG_03243","SJAG_03562","SJAG_04098","SJAG_02841","SJAG_04149","SJAG_06635"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59634,76565,78924,81607,92558,105229,115246],"is_not":false,"summary":null,"term":"GO:0009098"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-leucine, 2-amino-4-methylpentanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-leucine metabolic process","termid":"GO:0006551"},{"relation_name":"is_a","term_name":"pyruvate family amino acid biosynthetic process","termid":"GO:0009079"},{"relation_name":"is_a","term_name":"branched-chain amino acid biosynthetic process","termid":"GO:0009082"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02841":null,"SJAG_03243":null,"SJAG_03562":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-leucine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:LEUSYN-PWY"],"synonyms":[{"name":"L-leucine anabolism","type":"exact"},{"name":"L-leucine biosynthesis","type":"exact"},{"name":"L-leucine formation","type":"exact"},{"name":"L-leucine synthesis","type":"exact"},{"name":"leucine biosynthetic process","type":"broad"}],"termid":"GO:0009098","terms_by_termid":{"GO:0009098":null}}


id: GO:0061333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the renal tubule is generated by specification of cell fate, through the maintenance of cell polarity, regulated cell proliferation and morphogenetic cell rearrangements, shape changes and growth. A renal tubule is a tube that filters, re-absorbs and secretes substances to rid an organism of waste and to play a role in fluid homeostasis.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube morphogenesis","termid":"GO:0060562"},{"relation_name":"part_of","term_name":"renal tubule development","termid":"GO:0061326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal tubule morphogenesis","termid":"GO:0061333"}


id: PBO:0040146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asialoglycoprotein receptor 1","termid":"PBO:0040146"}


id: PBO:0034370
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_upstream_of_sequence_of","termid":"PBO:0034370"}


id: MONDO:0859276
data:
  {"annotated_genes":["SJAG_04994"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87690],"is_not":false,"summary":null,"term":"MONDO:0859276"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04994":null},"genotype_count":0,"is_obsolete":false,"name":"primordial dwarfism-immunodeficiency-lipodystrophy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5774198","MEDGEN:1823971","OMIM:620005"],"termid":"MONDO:0859276","terms_by_termid":{"MONDO:0859276":null},"xrefs":{"Monarch":{"xref_id":"0859276"}}}


id: PBO:0069070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 317, pseudogene","termid":"PBO:0069070"}


id: PBO:0051789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing F6","termid":"PBO:0051789"}


id: PBO:0083525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF RSM7/YJR113C","termid":"PBO:0083525"}


id: PBO:0052503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 15","termid":"PBO:0052503"}


id: PR:O13660
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC27B12.09c gene.","definition_xrefs":["UniProtKB:O13660","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C27B12.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.09c","synonyms":[{"name":"Spom972h-SPBC27B12.09c","type":"exact"}],"termid":"PR:O13660"}


id: GO:2000401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lymphocyte migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mononuclear cell migration","termid":"GO:0071675"},{"relation_name":"regulates","term_name":"lymphocyte migration","termid":"GO:0072676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphocyte migration","termid":"GO:2000401"}


id: GO:1905951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA recombination that takes place in mitochondrion.","definition_xrefs":["GO_REF:0000062","PMID:8087883","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"},{"relation_name":"is_a","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007005","GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"mitochondrion DNA recombination","synonyms":[{"name":"DNA recombination in mitochondria","type":"exact"}],"termid":"GO:1905951"}


id: GO:0140700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + GTP = 2 diphosphate + cyclic G-P(3'-5')A-P(2'-5') (cyclic 3',2' GAMP).","definition_xrefs":["PMID:34261127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic GMP-AMP synthase activity","termid":"GO:0140699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016779","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3',2'-cyclic GMP-AMP synthase activity","synonyms":[{"name":"3',2' cyclic-GMP-AMP synthase activity","type":"exact"},{"name":"3',2'-cyclic GAMP synthase activity","type":"exact"}],"termid":"GO:0140700"}


id: PBO:0064018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 52","termid":"PBO:0064018"}


id: GO:0055123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the digestive system over time, from its formation to the mature structure. The digestive system is the entire structure in which digestion takes place. Digestion is all of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"digestive system development","termid":"GO:0055123"}


id: PBO:0063847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PILR alpha associated neural protein","termid":"PBO:0063847"}


id: PBO:0017788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fizzy-related CDK inhibitor Srw1","termid":"PBO:0017788"}


id: PBO:0076633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transducin beta like 1 Y-linked","termid":"PBO:0076633"}


id: MONDO:1010413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epilepsy that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy, non-human animal","termid":"MONDO:1010001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, horse","secondary_identifiers":["OMIA:000344-9796"],"termid":"MONDO:1010413","xrefs":{"Monarch":{"xref_id":"1010413"}}}


id: PBO:0044993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaphanous related formin 1","termid":"PBO:0044993"}


id: GO:0004084
data:
  {"annotated_genes":["SJAG_04149"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052656"},{"annotations":[112416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052654"},{"annotations":[112417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052655"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a branched-chain amino acid (L-leucine, L-isoleucine and L-valine) + 2-oxoglutarate = L-glutamate + a 2-oxocarboxylate derived from the branched-chain amino acid.","definition_xrefs":["EC:2.6.1.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04149":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"branched-chain-amino-acid transaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-508179","Reactome:R-HSA-508189","Reactome:R-HSA-70723","Reactome:R-HSA-70724"],"synonyms":[{"name":"L-branched chain amino acid aminotransferase activity","type":"related"},{"name":"branched-chain amino acid aminotransferase activity","type":"exact"},{"name":"branched-chain amino acid-glutamate transaminase activity","type":"related"},{"name":"branched-chain aminotransferase activity","type":"related"},{"name":"branched-chain-amino-acid:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"glutamate-branched-chain amino acid transaminase activity","type":"related"},{"name":"transaminase B activity","type":"related"}],"termid":"GO:0004084","terms_by_termid":{"GO:0052654":null,"GO:0052655":null,"GO:0052656":null}}


id: PBO:0085357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphopantetheine:protein transferase (PPTase); activates mitochondrial acyl carrier protein (Acp1p) by phosphopantetheinylation","termid":"PBO:0085357"}


id: MONDO:0020600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute and painful inflammatory process that affects the pharynx. It is usually caused by viruses and less often bacteria. Signs and symptoms include discomfort on swallowing, low-grade fever, headache, and earache.","definition_xrefs":["NCIT:C34355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharyngitis","termid":"MONDO:0002258"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute pharyngitis","secondary_identifiers":["SCTID:363746003","icd11.foundation:1791890273","MEDGEN:114","EFO:0009657","UMLS:C0001344"],"synonyms":[{"name":"acute pharyngitis","type":"exact"},{"name":"pharyngitis, acute","type":"exact"}],"termid":"MONDO:0020600","xrefs":{"Monarch":{"xref_id":"0020600"}}}


id: PBO:0049468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen synthase 2","termid":"PBO:0049468"}


id: GO:0060277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stop, prevents or decreases transcription as part of the G1 phase of the mitotic cell cycle.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription involved in G1 phase of mitotic cell cycle (obsolete GO:0060277)","synonyms":[{"name":"negative regulation of transcription from RNA polymerase II promoter during G1 phase of mitotic cell cycle","type":"related"},{"name":"negative regulation of transcription involved in G1 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0060277"}


id: GO:0051560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of calcium ions within the cytoplasm of a cell or between mitochondria and their surroundings.","definition_xrefs":["GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular calcium ion homeostasis","termid":"GO:0006874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"mitochondrial calcium ion homeostasis","synonyms":[{"name":"calcium ion homeostasis in mitochondria","type":"exact"},{"name":"calcium ion homeostasis in mitochondrion","type":"exact"},{"name":"mitochondrial calcium ion concentration regulation","type":"exact"},{"name":"regulation of calcium ion concentration in mitochondria","type":"exact"},{"name":"regulation of calcium ion concentration in mitochondrion","type":"exact"},{"name":"regulation of mitochondrial calcium ion concentration","type":"exact"}],"termid":"GO:0051560"}


id: PBO:0057732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1307","termid":"PBO:0057732"}


id: MONDO:0009492
data:
  {"annotated_genes":["SJAG_02769"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88380],"is_not":false,"summary":null,"term":"MONDO:0009492"}]},"cv_name":"mondo","definition":"Succinyl-CoA:3-ketoacid CoA transferase deficiency (SCOTD) is a defect in ketone body utilization characterized by severe, potentially fatal intermittent episodes of ketoacidosis.","definition_xrefs":["Orphanet:832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of ketolysis","termid":"MONDO:0019229"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02769":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"succinyl-CoA:3-ketoacid CoA transferase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:270.8","SCTID:238004006","UMLS:C0342792","NANDO:2200499","GARD:4774","MESH:C537527","MEDGEN:137979","OMIM:245050"],"synonyms":[{"name":"3-oxoacid CoA transferase deficiency","type":"related"},{"name":"OXCT1 deficiency","type":"exact"},{"name":"SCOT deficiency","type":"exact"},{"name":"SCOTD","type":"related"},{"name":"Scot deficiency","type":"related"},{"name":"Succinyl CoA:3-oxoacid CoA transferase deficiency","type":"exact"},{"name":"ketoacidosis due to Scot deficiency","type":"related"},{"name":"succinyl-CoA acetoacetate transferase deficiency","type":"exact"},{"name":"succinyl-CoA:3-ketoacid CoA transferase deficiency","type":"exact"},{"name":"succinyl-CoA:3-oxoacid CoA transferase deficiency","type":"exact"},{"name":"succinyl-CoA:3-oxoacid-CoA transferase deficiency","type":"related"},{"name":"succinyl-Coa:3-ketoacid Coa-transferase deficiency","type":"related"},{"name":"succinyl-Coa:acetoacetate transferase deficiency","type":"related"}],"termid":"MONDO:0009492","terms_by_termid":{"MONDO:0009492":null},"xrefs":{"Monarch":{"xref_id":"0009492"}}}


id: MOD:00439
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Covalent modification of a peptide or protein amino acid phosphorylated threonine with a secondary loss of a neutral trihydrogen phosphate molecular fragment.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"O-phospho-L-threonine","termid":"MOD:00047"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"phosphorylated residue with neutral loss of phosphate","termid":"MOD:01151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-phospho-L-threonine with neutral loss of phosphate","synonyms":[{"name":"dPhosOPhosThr","type":"exact"}],"termid":"MOD:00439"}


id: GO:0048445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the carpel are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ morphogenesis","termid":"GO:0048444"},{"relation_name":"part_of","term_name":"carpel development","termid":"GO:0048440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carpel morphogenesis","secondary_identifiers":["GO:0048430"],"termid":"GO:0048445"}


id: GO:0008098
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an unprocessed 5S ribosomal RNA transcript.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5S rRNA binding","termid":"GO:0008097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"5S rRNA primary transcript binding","termid":"GO:0008098"}


id: GO:0042408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the conversion of geranyl diphosphate (GPP) into the acyclic monoterpenes beta-myrcene, (E)-beta-ocimene, and other minor cyclic monoterpenes.","definition_xrefs":["GOC:cr","PMID:10700382"],"gene_count":0,"genotype_count":0,"name":"obsolete myrcene/(E)-beta-ocimene synthase activity (obsolete GO:0042408)","synonyms":[{"name":"myrcene/(E)-beta-ocimene synthase activity","type":"exact"},{"name":"myrcene/ocimene synthase activity","type":"exact"}],"termid":"GO:0042408"}


id: PBO:0090461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-octaprenyl-6-methoxyphenol hydroxylase Coq6","termid":"PBO:0090461"}


id: SO:0001298
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2prime_O_methyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_prime_O_methyladenosine","secondary_identifiers":["RNAMOD:004"],"synonyms":[{"name":"2'-O-methyladenosine","type":"exact"},{"name":"Am","type":"exact"},{"name":"two prime O methyladenosine","type":"exact"}],"termid":"SO:0001298"}


id: PBO:0031705
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_necrotic_cell_death_(obsolete_FYPO:0000505)","termid":"PBO:0031705"}


id: GO:0098874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of sequential, propagated action potentials occurring in a single cell.","definition_xrefs":["ISBN:978-0071390118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spike train","secondary_identifiers":["GO:0099603"],"synonyms":[{"name":"burst of action potentials","type":"exact"},{"name":"spike-train","type":"exact"}],"termid":"GO:0098874"}


id: PBO:0070148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 62 pseudogene","termid":"PBO:0070148"}


id: MONDO:0005171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Chronic form of myeloproliferative neoplasm.","definition_xrefs":["MONDO:patterns/chronic"],"gene_count":0,"genotype_count":0,"name":"obsolete chronic myeloproliferative disorder (obsolete MONDO:0005171)","termid":"MONDO:0005171","xrefs":{"Monarch":{"xref_id":"0005171"}}}


id: PATO:0000859
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000859 pinna reflex value (obsolete PATO:0000859)","termid":"PATO:0000859"}


id: SO:0000466
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Germline genomic DNA including L-part1, V-intron and V-exon, with the 5' UTR and 3' UTR.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_segment","termid":"SO:0000460"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_gene_segment","synonyms":[{"name":"INSDC_feature:V_segment","type":"exact"},{"name":"V gene","type":"exact"},{"name":"V gene segment","type":"exact"},{"name":"V-GENE","type":"exact"},{"name":"variable_gene","type":"exact"}],"termid":"SO:0000466"}


id: PATO:0000729
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000729 physiological function value (obsolete PATO:0000729)","termid":"PATO:0000729"}


id: PBO:0064861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 16B","termid":"PBO:0064861"}


id: SO:0001851
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A GATA promoter element with consensus sequence WGATAA, found in promoters of genes repressed in the presence of iron.","definition_xrefs":["PMID:17211681","PMID:11956219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GATA_box","termid":"SO:0001840"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron_repressed_GATA_element","synonyms":[{"name":"IDP (GATA)","type":"exact"},{"name":"iron repressed GATA element","type":"exact"}],"termid":"SO:0001851"}


id: MONDO:1011348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Post-Infectious disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-infectious disorder, non-human animal","termid":"MONDO:1011348","xrefs":{"Monarch":{"xref_id":"1011348"}}}


id: PBO:0053443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 390","termid":"PBO:0053443"}


id: SO:0002186
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of genomic sequence known to undergo mutational events with greater frequency than expected by chance.","direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutational_hotspot","synonyms":[{"name":"mutational hotspot","type":"exact"}],"termid":"SO:0002186"}


id: GO:0035388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the Roundabout signaling pathway.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of Roundabout signaling pathway","termid":"GO:0035386"},{"relation_name":"positively_regulates","term_name":"Roundabout signaling pathway","termid":"GO:0035385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of Roundabout signaling pathway","synonyms":[{"name":"positive regulation of Roundabout signalling pathway","type":"exact"}],"termid":"GO:0035388"}


id: GO:0033736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + L-lysine + O2 = (S)-2-amino-6-oxohexanoate + H2O2 + NH4+.","definition_xrefs":["RHEA:22548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid oxidase activity","termid":"GO:0001716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-lysine 6-oxidase activity","secondary_identifiers":["MetaCyc:1.4.3.20-RXN","KEGG_REACTION:R07598","EC:1.4.3.20"],"synonyms":[{"name":"L-lysine-epsilon-oxidase activity","type":"related"},{"name":"L-lysine:oxygen 6-oxidoreductase (deaminating) activity","type":"related"},{"name":"Lod","type":"related"},{"name":"LodA","type":"related"},{"name":"marinocine","type":"related"}],"termid":"GO:0033736"}


id: PBO:0064736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 72","termid":"PBO:0064736"}


id: MONDO:0016190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of myofibrillar proteins","termid":"MONDO:0016186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of protein ZASP","secondary_identifiers":["Orphanet:209050","MEDGEN:1842575","UMLS:C5680840","GARD:20429"],"termid":"MONDO:0016190","xrefs":{"Monarch":{"xref_id":"0016190"}}}


id: GO:0102044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-chlorobenzoate + O2 + a reduced electron acceptor = 3-chlorobenzoate-cis-4,5-diol + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-chlorobenzoate-4,5-oxygenase activity","secondary_identifiers":["MetaCyc:RXN-10421"],"termid":"GO:0102044"}


id: GO:1903880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 17alpha-hydroxyprogesterone.","definition_xrefs":["GOC:mr","GO_REF:0000067","GOC:TermGenie","PMID:10802282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"17alpha-hydroxyprogesterone binding","termid":"GO:1903880"}


id: PBO:0039573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and sterile alpha motif domain containing 1A","termid":"PBO:0039573"}


id: PBO:0030007
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_middle_meiotic_gene_mRNA_during_late_meiosis","termid":"PBO:0030007"}


id: PBO:0070674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 45","termid":"PBO:0070674"}


id: FYPO:0003810
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which  mitochondria are smaller and more numerous than normal. Total mitochondrial volume is usually similar to normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"small fragmented mitochondria","termid":"FYPO:0007193"},{"relation_name":"has_part","term_name":"mitochondria present in increased numbers","termid":"FYPO:0007194"},{"relation_name":"has_part","term_name":"normal mitochondrial volume","termid":"FYPO:0007210"},{"relation_name":"is_a","term_name":"small fragmented mitochondria","termid":"FYPO:0007193"},{"relation_name":"is_a","term_name":"normal mitochondrial volume","termid":"FYPO:0007210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"small fragmented mitochondria present in increased numbers","synonyms":[{"name":"fragmented mitochondria","type":"related"},{"name":"small mitochondria present in increased numbers during mitotic cell cycle","type":"related"},{"name":"small mitochondria present in increased numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0003810"}


id: GO:0045985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving pyrimidine nucleobases.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pyrimidine nucleobase metabolic process","termid":"GO:0006142"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of pyrimidine nucleobase metabolic process","synonyms":[{"name":"activation of pyrimidine base metabolic process","type":"narrow"},{"name":"positive regulation of pyrimidine base metabolic process","type":"exact"},{"name":"positive regulation of pyrimidine base metabolism","type":"exact"},{"name":"stimulation of pyrimidine base metabolic process","type":"narrow"},{"name":"up regulation of pyrimidine base metabolic process","type":"exact"},{"name":"up-regulation of pyrimidine base metabolic process","type":"exact"},{"name":"upregulation of pyrimidine base metabolic process","type":"exact"}],"termid":"GO:0045985"}


id: MONDO:0018514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of epithelial neoplasm of rectum that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare epithelial tumor of rectum (obsolete MONDO:0018514)","secondary_identifiers":["Orphanet:423998"],"synonyms":[{"name":"rare epithelial neoplasm of rectum","type":"exact"},{"name":"rare rectal epithelial tumor","type":"exact"}],"termid":"MONDO:0018514","xrefs":{"Monarch":{"xref_id":"0018514"}}}


id: PR:Q9P7X3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- frg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7X3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein frg1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.12","synonyms":[{"name":"Spom972h-frg1","type":"exact"}],"termid":"PR:Q9P7X3"}


id: GO:0043312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated exocytosis of secretory granules containing preformed mediators such as proteases, lipases, and inflammatory mediators by a neutrophil.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte degranulation","termid":"GO:0043299"},{"relation_name":"part_of","term_name":"neutrophil activation involved in immune response","termid":"GO:0002283"},{"relation_name":"part_of","term_name":"neutrophil mediated immunity","termid":"GO:0002446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"neutrophil degranulation","secondary_identifiers":["Reactome:R-HSA-6798695"],"synonyms":[{"name":"heterophil degranulation","type":"related"},{"name":"neutrophil granule exocytosis","type":"exact"}],"termid":"GO:0043312"}


id: GO:0018865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving acrylonitrile, a colorless, volatile liquid with a pungent odor. Acrylonitrile is used in the production of acrylic fibers, plastics, and synthetic rubbers.","definition_xrefs":["PMID:1390687","PMID:3830164"],"gene_count":0,"genotype_count":0,"name":"obsolete acrylonitrile metabolic process (obsolete GO:0018865)","synonyms":[{"name":"acrylonitrile metabolism","type":"broad"}],"termid":"GO:0018865"}


id: MONDO:1012002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitreous degeneration, non-human animal","secondary_identifiers":["OMIA:002409"],"termid":"MONDO:1012002","xrefs":{"Monarch":{"xref_id":"1012002"}}}


id: PBO:0076936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking from ER to golgi regulator","termid":"PBO:0076936"}


id: PBO:0048426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATD1 divergent transcript","termid":"PBO:0048426"}


id: MONDO:0002494
data:
  {"annotated_genes":["SJAG_01457","SJAG_03786"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007079"},{"annotations":[87011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012454"}]},"cv_name":"mondo","definition":"A category of psychiatric disorders which include disorders related to the taking of a drug of abuse (including alcohol, prescribed medications and recreational drugs).","definition_xrefs":["NCIT:C92203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psychiatric disorder","termid":"MONDO:0002025"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01457":null,"SJAG_03786":null},"genotype_count":0,"is_obsolete":false,"name":"substance-related disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0236969","MEDGEN:66746","MESH:D019966","DOID:303","ICD10CM:F10-F19"],"synonyms":[{"name":"substance induced mood disorders","type":"exact"},{"name":"substance-related disorder","type":"exact"}],"termid":"MONDO:0002494","terms_by_termid":{"MONDO:0007079":null,"MONDO:0012454":null},"xrefs":{"Monarch":{"xref_id":"0002494"}}}


id: PBO:0012043
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae vht1","termid":"PBO:0012043"}


id: PBO:0057060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 144","termid":"PBO:0057060"}


id: PATO:0001946
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color pattern inhering in a bearer by virtue of bearer's exhibiting transverse stripes of one hue or degree of saturation crossing another.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-colored","termid":"PATO:0001533"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"banded","synonyms":[{"name":"striped","type":"exact"}],"termid":"PATO:0001946"}


id: MONDO:0001883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition that is caused by recurring atheroembolism in the lower extremities. It is characterized by cyanotic discoloration of the toes, usually the first, fourth, and fifth toes. Discoloration may extend to the lateral aspect of the foot. Despite the gangrene-like appearance, blue toes may respond to conservative therapy without amputation.","definition_xrefs":["MESH:D018438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol embolism","termid":"MONDO:0005568"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blue toe syndrome","secondary_identifiers":["MEDGEN:66940","DOID:14121","UMLS:C0242645"],"synonyms":[{"name":"purple toe syndrome","type":"exact"},{"name":"trash foot","type":"exact"},{"name":"warfarin blue toe syndrome","type":"exact"}],"termid":"MONDO:0001883","xrefs":{"Monarch":{"xref_id":"0001883"}}}


id: PBO:0040339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5MC2 pseudogene 5","termid":"PBO:0040339"}


id: GO:0071377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucagon stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucagon","termid":"GO:0033762"},{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glucagon stimulus","secondary_identifiers":["Reactome:R-HSA-163359"],"termid":"GO:0071377"}


id: FYPO:0004450
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to calcium ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to calcium ion","synonyms":[{"name":"normal protein phosphorylation during cellular response to calcium","type":"exact"},{"name":"normal protein phosphorylation during cellular response to calcium ion during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to calcium ion during vegetative growth","type":"exact"}],"termid":"FYPO:0004450"}


id: MONDO:0019899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete distal monosomy 20q (obsolete MONDO:0019899)","secondary_identifiers":["Orphanet:96152"],"synonyms":[{"name":"distal deletion 20q","type":"exact"},{"name":"distal monosomy type 20q","type":"exact"},{"name":"monosomy 20qter","type":"exact"},{"name":"telomeric deletion 20q","type":"exact"}],"termid":"MONDO:0019899","xrefs":{"Monarch":{"xref_id":"0019899"}}}


id: GO:0003152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which an epithelial sheet bends along a linear axis, contributing to embryonic heart tube formation.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"},{"relation_name":"part_of","term_name":"embryonic heart tube formation via epithelial folding","termid":"GO:0003145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of an epithelial fold involved in embryonic heart tube formation","termid":"GO:0003152"}


id: MONDO:0015386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epignathus is a very rare and life threatening intraoral teratoma, usually arising from the maxilla, mandible, palate or base of skull and invading the cranium, nasopharynx or oral cavity. Epignathus is more commonly seen in females, and presents with various manifestations (depending on the tumor size) including obstructive polyhydramnios in the prenatal period and dyspnea, cyanosis, cough, difficulty in sucking and swallowing, and rarely vomiting (due to swallowing difficulties) postnatally. When large, they can lead to airway obstruction, asphyxia and death in the neonatal period.","definition_xrefs":["Orphanet:141077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"extragonadal teratoma","termid":"MONDO:0019500"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epignathus","secondary_identifiers":["GARD:19943","icd11.foundation:7319064","HP:0030767","MEDGEN:540117","SCTID:31248004","UMLS:C0266725"],"synonyms":[{"name":"Epignathus","type":"exact"},{"name":"epignathus (disease)","type":"exact"},{"name":"oropharyngeal teratoma","type":"exact"}],"termid":"MONDO:0015386","xrefs":{"Monarch":{"xref_id":"0015386"}}}


id: MONDO:0004552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cervical squamous cell carcinoma with minimal stromal invasion. The risk of lymph node metastasis is low.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical squamous cell carcinoma","termid":"MONDO:0006143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"microinvasive cervical squamous cell carcinoma","secondary_identifiers":["MEDGEN:272565","NCIT:C36094","UMLS:C1333370","DOID:8409"],"synonyms":[{"name":"early invasive cervical squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0004552","xrefs":{"Monarch":{"xref_id":"0004552"}}}


id: PR:O94512
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC646.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol-binding protein-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.08c","synonyms":[{"name":"Spom972h-SPBC646.08c","type":"exact"}],"termid":"PR:O94512"}


id: GO:0070578
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A trimeric protein complex required for the formation of a mature RNA-induced silencing complex (RISC). In humans the complex is composed of the endonuclease Dicer (DICER1), TRBP (TARBP2) and the Argonaute protein Ago2 (EIF2C2/AGO2). Within the complex, Dicer and TRBP are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto Ago2. Ago2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from Dicer and TRBP. This complex has endoribonuclease activity.","definition_xrefs":["PMID:18178619","GOC:nc","GOC:rph","PMID:19820710","GOC:ab","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoribonuclease complex","termid":"GO:1902555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RISC-loading complex","synonyms":[{"name":"RLC","type":"related"},{"name":"miRLC","type":"exact"},{"name":"microRNA loading complex","type":"exact"}],"termid":"GO:0070578"}


id: PBO:0073079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal cell derived factor 4","termid":"PBO:0073079"}


id: MONDO:1011623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Xanthinuria that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthinuria, non-human animal","termid":"MONDO:1011450"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xanthinuria, dog","secondary_identifiers":["OMIA:001283-9615"],"termid":"MONDO:1011623","xrefs":{"Monarch":{"xref_id":"1011623"}}}


id: PBO:0056988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 31","termid":"PBO:0056988"}


id: PBO:0066367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDH10 antisense RNA 1","termid":"PBO:0066367"}


id: GO:0039514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupt a JAK-STAT signal cascade in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:sp","GOC:bf","PMID:29924996","PMID:20624917","PMID:27437422","PMID:31413201","PMID:22919663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host signal transduction pathway","termid":"GO:0052029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host JAK-STAT cascade","synonyms":[{"name":"disruption by virus of host JAK-STAT cascade","type":"narrow"},{"name":"down-regulation by virus of host JAK-STAT cascade","type":"narrow"},{"name":"downregulation by virus of host JAK-STAT cascade","type":"narrow"},{"name":"inhibition by virus of host JAK-STAT cascade","type":"narrow"},{"name":"negative regulation by virus of host JAK-STAT cascade","type":"narrow"},{"name":"suppression by virus of host JAK-STAT cascade","type":"narrow"}],"termid":"GO:0039514"}


id: GO:0099109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a G protein-coupled receptor binding to its physiological ligand, where the pathway proceeds activation of a potassium ion channel.","definition_xrefs":["GOC:dos","PMID:9429760"],"gene_count":0,"genotype_count":0,"name":"obsolete potassium channel activating, G protein-coupled receptor signaling pathway (obsolete GO:0099109)","synonyms":[{"name":"potassium channel activating, G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0099109"}


id: GO:1904764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a chaperone-mediated autophagy translocation complex into its constituent components.","definition_xrefs":["PMID:18644871","GOC:TermGenie","GO_REF:0000079","GOC:pad","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chaperone-mediated autophagy translocation complex disassembly","synonyms":[{"name":"CMA receptor complex disassembly","type":"related"},{"name":"CMA translocation complex disassembly","type":"exact"},{"name":"chaperone-mediated autophagy receptor complex disassembly","type":"related"}],"termid":"GO:1904764"}


id: GO:0034321
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: octanoyl-CoA + an alcohol = CoA + an octyl ester.","definition_xrefs":["GOC:mah","PMID:16361250"],"gene_count":0,"genotype_count":0,"name":"obsolete alcohol O-octanoyltransferase activity (obsolete GO:0034321)","termid":"GO:0034321"}


id: FYPO:0006231
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of translational initiation in the cytoplasm is decreased during a cellular response to osmotic stress.","definition_xrefs":["PMID:16278445","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cytoplasmic translational initiation","termid":"FYPO:0003125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased cytoplasmic translational initiation during cellular response to osmotic stress","synonyms":[{"name":"decreased cytoplasmic translation initiation during cellular response to osmotic stress","type":"exact"},{"name":"decreased cytoplasmic translational initiation during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"decreased cytoplasmic translational initiation during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"reduced cytoplasmic translational initiation during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0006231"}


id: GO:0015393
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete uracil/uridine permease activity (obsolete GO:0015393)","synonyms":[{"name":"uracil/uridine permease activity","type":"exact"}],"termid":"GO:0015393"}


id: PBO:0068585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 36, pseudogene","termid":"PBO:0068585"}


id: PBO:0066157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP8 N-terminal like","termid":"PBO:0066157"}


id: PBO:0069474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 741, pseudogene","termid":"PBO:0069474"}


id: PBO:0064214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C beta 1","termid":"PBO:0064214"}


id: PBO:0042120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 192","termid":"PBO:0042120"}


id: PATO:0001589
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Increased, intensified.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001589 enhanced (obsolete PATO:0001589)","termid":"PATO:0001589"}


id: PBO:0077068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THUMPD3 antisense RNA 1","termid":"PBO:0077068"}


id: FYECO:0000416
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and with L-glutamatic acid as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, cysteine nitrogen source","synonyms":[{"name":"glucose minimal medium, cysteine nitrogen source","type":"exact"},{"name":"standard glucose minimal medium, cysteine nitrogen source","type":"related"}],"termid":"FYECO:0000416"}


id: MONDO:0003681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chondrosarcoma characterized by the presence of myxoid changes.","definition_xrefs":["NCIT:C4303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chondrosarcoma","termid":"MONDO:0008977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"myxoid chondrosarcoma","secondary_identifiers":["UMLS:C0334551","ICDO:9231/3","MEDGEN:87262","DOID:5861","ONCOTREE:MYCHS"],"synonyms":[{"name":"MYCHS","type":"related"},{"name":"myxoid chondrosarcoma","type":"exact"}],"termid":"MONDO:0003681","xrefs":{"Monarch":{"xref_id":"0003681"}}}


id: MONDO:0001694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial keratitis","termid":"MONDO:0004902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"diffuse interstitial keratitis","secondary_identifiers":["icd11.foundation:1750662534","DOID:13353","SCTID:17157001","ICD9:370.52","UMLS:C0155089","MEDGEN:509780"],"termid":"MONDO:0001694","xrefs":{"Monarch":{"xref_id":"0001694"}}}


id: MONDO:0011761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant nonsyndromic deafness that has material basis in variation in the chromosome region 6p24.1-p22.3.","definition_xrefs":["PMID:10764236","DOID:0110551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 21","secondary_identifiers":["MESH:C564634","GARD:18116","OMIM:607017","UMLS:C1846922","MEDGEN:339643"],"synonyms":[{"name":"DFNA21","type":"narrow"},{"name":"autosomal dominant deafness 21","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 21","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 21","type":"narrow"},{"name":"deafness, autosomal dominant 21","type":"narrow"}],"termid":"MONDO:0011761","xrefs":{"Monarch":{"xref_id":"0011761"}}}


id: PBO:0041086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain and PHD finger containing 1","termid":"PBO:0041086"}


id: FYPO:0007913
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which organelle localization is normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal organelle localization","termid":"FYPO:0007913"}


id: FYPO:0005781
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of cell cycle arrest or delay due to regulation by the mitotic spindle assembly checkpoint is lower than in wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly checkpoint","termid":"FYPO:0000168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000298","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased duration of mitotic spindle assembly checkpoint","synonyms":[{"name":"decreased duration of mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"decreased duration of mitotic spindle assembly checkpoint activation","type":"exact"},{"name":"decreased duration of mitotic spindle assembly checkpoint during vegetative growth","type":"exact"},{"name":"decreased duration of spindle assembly checkpoint during mitotic cell cycle","type":"exact"},{"name":"premature mitotic spindle assembly checkpoint deactivation","type":"related"},{"name":"reduced duration of mitotic spindle assembly checkpoint","type":"exact"}],"termid":"FYPO:0005781"}


id: PBO:0003968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 kinase family protein","termid":"PBO:0003968"}


id: MONDO:0043723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fracture in the proximal half of the shaft of the ulna, with dislocation of the head of the radius.","definition_xrefs":["MESH:D009011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ulna fracture","termid":"MONDO:0005322"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Monteggia's fracture","secondary_identifiers":["SCTID:123973009"],"synonyms":[{"name":"Monteggia fracture","type":"related"},{"name":"Monteggias fracture","type":"related"},{"name":"fracture, Monteggia's","type":"related"},{"name":"monteggia fracture","type":"related"},{"name":"monteggia fracture dislocation","type":"related"},{"name":"monteggia's dislocation","type":"related"},{"name":"monteggia's fracture","type":"exact"}],"termid":"MONDO:0043723","xrefs":{"Monarch":{"xref_id":"0043723"}}}


id: FYECO:0000267
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which naphthaleneacetic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ naphthaleneacetic acid","termid":"FYECO:0000267"}


id: GO:0009339
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the oxidation of 2-hydroxy acid to form 2-oxo acid and hydrogen peroxide (H2O2). The enzyme is a flavoprotein (FMN).","definition_xrefs":["PMID:4557653","PMID:8606183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"glycolate oxidase complex","termid":"GO:0009339"}


id: GO:1905902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesoderm formation.","definition_xrefs":["GOC:BHF_miRNA","PMID:23939491","GOC:rph","GOC:BHF","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"mesoderm formation","termid":"GO:0001707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesoderm formation","termid":"GO:1905902"}


id: MONDO:0001227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of tympanitis.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic otitis media","termid":"MONDO:0021204"},{"relation_name":"is_a","term_name":"tympanitis","termid":"MONDO:0024616"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic tympanitis","secondary_identifiers":["UMLS:C0395849","SCTID:89723004","DOID:11217","ICD9:384.1","MEDGEN:583089"],"synonyms":[{"name":"tympanitis, chronic","type":"exact"}],"termid":"MONDO:0001227","xrefs":{"Monarch":{"xref_id":"0001227"}}}


id: PBO:0053287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain containing 1","termid":"PBO:0053287"}


id: GO:0002233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an immune cell in response to an external stimulus a part of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte migration involved in immune response","termid":"GO:0002522"},{"relation_name":"is_a","term_name":"leukocyte chemotaxis","termid":"GO:0030595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte chemotaxis involved in immune response","synonyms":[{"name":"immune cell chemotaxis during immune response","type":"exact"},{"name":"leucocyte chemotaxis during immune response","type":"exact"}],"termid":"GO:0002233"}


id: FYPO:0006562
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during G2 phase of the mitotic cell cycle is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"increased RNA level during mitotic G2 phase","synonyms":[{"name":"increased RNA accumulation during mitotic G2 phase","type":"related"},{"name":"increased RNA level during G2 phase of mitotic cell cycle","type":"exact"},{"name":"increased RNA level during mitotic G2 phase during vegetative growth","type":"exact"},{"name":"increased mRNA level during mitotic G2 phase","type":"narrow"},{"name":"increased transcript level during mitotic G2 phase","type":"exact"}],"termid":"FYPO:0006562"}


id: CHEBI:34656
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cumene","termid":"CHEBI:34656"}


id: GO:0021790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branchiomotor neuron growth cone in the branchial arch mesenchyme is directed to a specific target site in the branchial arch mesenchyme in response to a repulsive chemical cue. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx.","definition_xrefs":["GOC:dgh","GOC:jid","PMID:14699587","GOC:dph","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiomotor neuron axon guidance in branchial arch mesenchyme","termid":"GO:0021789"},{"relation_name":"is_a","term_name":"chemorepulsion of branchiomotor axon","termid":"GO:0021793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion of branchiomotor neuron axon in branchial arch mesenchyme","synonyms":[{"name":"negative chemotaxis of branchiomotor neuron axon in branchial arch mesenchyme","type":"exact"}],"termid":"GO:0021790"}


id: PBO:0061583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"netrin 3","termid":"PBO:0061583"}


id: MONDO:0010180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive spondylocostal dysostosis (ARSD) is a rare condition of variable severity associated with vertebral and rib segmentation defects and characterized by a short neck with limited mobility, winged scapulae, a short trunk, and short stature with multiple vertebral anomalies at all levels of the spine.","definition_xrefs":["Orphanet:2311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondylocostal dysostosis","termid":"MONDO:0000359"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"disorder of fucoglycosan synthesis","termid":"MONDO:0017747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0024322","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"autosomal recessive spondylocostal dysostosis","secondary_identifiers":["ICD9:756.9","SCTID:61367005","GARD:6798","MESH:C535781"],"synonyms":[{"name":"Jarcho-Levin syndrome","type":"exact"},{"name":"SCDO1","type":"related"},{"name":"costovertebral dysplasia","type":"related"},{"name":"spondylocostal dysostosis 1, autosomal recessive","type":"related"},{"name":"spondylocostal dysostosis, autosomal recessive","type":"exact"}],"termid":"MONDO:0010180","xrefs":{"Monarch":{"xref_id":"0010180"}}}


id: MONDO:0016678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete maternal disease-related embryofetopathy (obsolete MONDO:0016678)","secondary_identifiers":["Orphanet:251535"],"termid":"MONDO:0016678","xrefs":{"Monarch":{"xref_id":"0016678"}}}


id: PBO:0034281
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-molecularly_increases_activity_of","termid":"PBO:0034281"}


id: GO:0090730
data:
  {"annotated_genes":["SJAG_01581","SJAG_02275","SJAG_03789","SJAG_02374"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[65678,93578,96857,120583],"is_not":false,"summary":null,"term":"GO:0090730"}]},"cv_name":"cellular_component","definition":"A four subunit complex, that comprises all the necessary RNA processing enzymes (endonuclease, polynucleotide kinase, and exonuclease) to mediate 'cistronic rRNA transcript ITS2 (internal transcribed spacer) cleavage' (GO:0000448).","definition_xrefs":["GOC:vw","PMID:26638174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoribonuclease complex","termid":"GO:1902555"},{"relation_name":"is_a","term_name":"protein kinase complex","termid":"GO:1902911"},{"relation_name":"is_a","term_name":"exoribonuclease complex","termid":"GO:1905354"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01581":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_03789":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991","GO:0005829"],"is_obsolete":false,"name":"Las1 complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"Las1-Grc3-Rat1-Rai1","type":"narrow"}],"termid":"GO:0090730","terms_by_termid":{"GO:0090730":null}}


id: PBO:0029284
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_mitotic_spindle","termid":"PBO:0029284"}


id: GO:2001083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to alpha-D-glucan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"alpha-D-glucan binding","termid":"GO:2001083"}


id: PBO:0091495
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae HAL3","termid":"PBO:0091495"}


id: PBO:0063059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter of CDKN1A antisense DNA damage activated RNA","termid":"PBO:0063059"}


id: GO:0019601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The degradation of toluene to form pyruvate and acetaldehyde; the first step in the pathway is the oxidation of toluene to form 2-hydroxytoluene (o-cresol).","definition_xrefs":["MetaCyc:TOLUENE-DEG-2-OH-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene oxidation","termid":"GO:0019600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"toluene oxidation via 2-hydroxytoluene","termid":"GO:0019601"}


id: MONDO:0011350
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87375,87376],"is_not":false,"summary":null,"term":"MONDO:0011350"}]},"cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the MYH9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 17","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110548","GARD:9726","OMIM:603622","UMLS:C1863659","MEDGEN:350942"],"synonyms":[{"name":"DFNA17","type":"narrow"},{"name":"MYH9 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 17","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 17","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in MYH9","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 17","type":"narrow"},{"name":"cochleosaccular degeneration","type":"related"},{"name":"deafness, autosomal dominant 17","type":"narrow"},{"name":"deafness, autosomal dominant nonsyndromic sensorineural 17","type":"narrow"},{"name":"deafness, autosomal dominant type 17","type":"narrow"},{"name":"late-onset progressive hereditary hearing impairment due to cochleosaccular degeneration","type":"related"},{"name":"nonsyndromic hereditary deafness DFNA17","type":"narrow"}],"termid":"MONDO:0011350","terms_by_termid":{"MONDO:0011350":null},"xrefs":{"Monarch":{"xref_id":"0011350"}}}


id: MONDO:0006407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse malignant mesothelioma arising from the pleura and less often the peritoneum. It is characterized by the presence of spindle cells. Anaplastic morphologic features and multinucleated malignant cells may also be seen.","definition_xrefs":["NCIT:C45655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant mesothelioma","termid":"MONDO:0006292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"sarcomatoid mesothelioma","secondary_identifiers":["MEDGEN:137774","DOID:4488","UMLS:C0334513","EFO:1000521"],"synonyms":[{"name":"malignant fibrous mesothelioma","type":"exact"},{"name":"malignant fibrous mesothelioma (morphologic abnormality)","type":"exact"},{"name":"sarcomatoid mesothelioma","type":"exact"},{"name":"sarcomatoid mesothelioma (morphologic abnormality)","type":"exact"},{"name":"spindled mesothelioma","type":"exact"}],"termid":"MONDO:0006407","xrefs":{"Monarch":{"xref_id":"0006407"}}}


id: MONDO:0009434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"MHC class I deficiency","termid":"MONDO:0011476"},{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hypoproteinemia, hypercatabolic","secondary_identifiers":["MEDGEN:343422","OMIM:241600","MESH:C565476","UMLS:C1855796","GARD:15185","DOID:0111981"],"synonyms":[{"name":"B2M deficiency","type":"related"},{"name":"Beta-2-microglobulin deficiency","type":"related"},{"name":"IMD43","type":"related"},{"name":"hypoproteinemia, hypercatabolic","type":"exact"},{"name":"immunodeficiency 43","type":"related"}],"termid":"MONDO:0009434","xrefs":{"Monarch":{"xref_id":"0009434"}}}


id: PBO:0067995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 297","termid":"PBO:0067995"}


id: PBO:0040310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit alpha pseudogene 2","termid":"PBO:0040310"}


id: PBO:0017465
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-go_annotation_extension_relation","termid":"PBO:0017465"}


id: PBO:0028977
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_nitrite","termid":"PBO:0028977"}


id: PBO:0043104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate synthase 1","termid":"PBO:0043104"}


id: MONDO:0001791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial urinary tract infection","termid":"MONDO:0005247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal urinary tract infectious disease","secondary_identifiers":["DOID:1375","MEDGEN:536451","SCTID:12301009","ICD9:771.82","UMLS:C0235815"],"synonyms":[{"name":"urinary tract infection of newborn","type":"exact"}],"termid":"MONDO:0001791","xrefs":{"Monarch":{"xref_id":"0001791"}}}


id: PBO:0000444
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.7","termid":"PBO:0000444"}


id: FYPO:0003969
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a mitotic spindle in an abnormal location. The normal location is centered at the midpoint of, and parallel to, the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002399","FYPO:0005447","FYPO:0000054","FYPO:0000120"],"is_obsolete":false,"name":"mislocalized mitotic spindle","synonyms":[{"name":"mislocalised mitotic spindle","type":"exact"},{"name":"mislocalized mitotic spindle during vegetative growth","type":"exact"},{"name":"mislocalized spindle during mitosis","type":"exact"},{"name":"mislocalized spindle during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003969"}


id: MONDO:0013100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 8","secondary_identifiers":["UMLS:C2751607","GARD:15609","MEDGEN:414420","MESH:C567802","OMIM:613055"],"synonyms":[{"name":"ATFB8","type":"exact"},{"name":"atrial fibrillation, familial, 8","type":"exact"}],"termid":"MONDO:0013100","xrefs":{"Monarch":{"xref_id":"0013100"}}}


id: GO:0005728
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Circular DNA molecules encoding ribosomal RNA that are replicated independently of chromosomal replication. These molecules originate in the chromosome but are excised and circularized, often by intramolecular homologous recombination between direct tandem repeats.","definition_xrefs":["GOC:mah","PMID:12044934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrachromosomal circular DNA","termid":"GO:0005727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrachromosomal rDNA circle","synonyms":[{"name":"extrachromosomal ribosomal DNA circle","type":"exact"}],"termid":"GO:0005728"}


id: PBO:0041799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CARD8 antisense RNA 1","termid":"PBO:0041799"}


id: PBO:0072796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 4 pseudogene 2","termid":"PBO:0072796"}


id: MONDO:1011500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epidermolysis bullosa simplex that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa, dog","termid":"MONDO:1010750"},{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex, non-human animal","termid":"MONDO:1011428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermolysis bullosa simplex, dog","secondary_identifiers":["OMIA:002082-9615"],"termid":"MONDO:1011500","xrefs":{"Monarch":{"xref_id":"1011500"}}}


id: PBO:0089641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual-specifity cAMP/cGMP phosphodiesterase Cgs2","termid":"PBO:0089641"}


id: GO:0071112
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha4-beta4 integrin complex bound to EMILIN-1 (ElastinMicrofibril Interface Located ProteIN).","definition_xrefs":["PMID:12456677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alpha4-beta4 integrin-EMILIN-1 complex","synonyms":[{"name":"ITGA4-ITGB4-EMILIN1 complex","type":"narrow"}],"termid":"GO:0071112"}


id: MOD:00152
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S'-(8alpha-FAD)-L-cystine.","definition_xrefs":["RESID:AA0143","Unimod:50#C","PubMed:10220347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD modified residue","termid":"MOD:00895"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(8alpha-FAD)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-[8alpha-riboflavin 5'-(trihydrogen diphosphate) 5'->5'-ester with adenosine]sulfanylpropanoic acid","type":"exact"},{"name":"8alpha-(S-cysteinyl)FAD","type":"exact"},{"name":"FAD","type":"related"},{"name":"Flavin adenine dinucleotide","type":"related"},{"name":"MOD_RES S-8alpha-FAD cysteine","type":"exact"},{"name":"S-(8alpha-FAD)-L-cysteine","type":"exact"},{"name":"S8aFADCys","type":"exact"}],"termid":"MOD:00152"}


id: GO:0044728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of adding or removing a methyl group from one or more nucleotides within an DNA molecule.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA methylation or demethylation (obsolete GO:0044728)","synonyms":[{"name":"changes in DNA methylation","type":"related"}],"termid":"GO:0044728"}


id: PBO:0059817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 43","termid":"PBO:0059817"}


id: MONDO:0003158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infiltrating malignant tumor characterized by the presence of atypical cells with myoepithelial differentiation. Representative examples include malignant breast myoepithelioma and salivary gland myoepithelial carcinoma.","definition_xrefs":["NCIT:C7596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoepithelial tumor","termid":"MONDO:0002380"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant myoepithelioma","secondary_identifiers":["DOID:4838","ICDO:8982/3","ONCOTREE:STMYEC","MEDGEN:90822","UMLS:C0334699"],"synonyms":[{"name":"malignant myoepithelioma","type":"exact"},{"name":"myoepithelial carcinoma","type":"exact"},{"name":"myoepithelioma carcinoma","type":"related"},{"name":"myoepithelioma, malignant","type":"exact"},{"name":"soft tissue myoepithelial carcinoma","type":"related"}],"termid":"MONDO:0003158","xrefs":{"Monarch":{"xref_id":"0003158"}}}


id: PBO:0054089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1442","termid":"PBO:0054089"}


id: PBO:0070292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 33","termid":"PBO:0070292"}


id: PR:O74312
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg9 gene.","definition_xrefs":["UniProtKB:O74312","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.07c","synonyms":[{"name":"Spom972h-atg9","type":"exact"}],"termid":"PR:O74312"}


id: GO:0060821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex by a mechanism of DNA methylation.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of X chromosome by DNA methylation (obsolete GO:0060821)","termid":"GO:0060821"}


id: GO:1990647
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dimeric, sequence specific DNA-binding transcription factor complex regulating the expression of genes involved in immune and inflammatory responses. Exists at least as alpha and beta homodimeric forms. Binds to regulatory regions of several acute-phase and cytokines genes and probably plays a role in the regulation of acute-phase reaction, inflammation and hemopoiesis. The consensus recognition site is 5'-T[TG]NNGNAA[TG]-3'. Transcription factor activity is inhibited by binding of CHOP forming heterodimers with alternative transcription factor activities.","definition_xrefs":["GOC:bhm","GOC:pad","GOC:PARL","PMID:8657121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"C/EBP complex","synonyms":[{"name":"C/EBP homodimer complex","type":"exact"},{"name":"C/EBP transcription factor complex","type":"exact"},{"name":"C/EBPalpha complex","type":"narrow"},{"name":"C/EBPalpha homodimer complex","type":"narrow"},{"name":"C/EBPbeta complex","type":"narrow"},{"name":"C/EBPbeta homodimer complex","type":"narrow"}],"termid":"GO:1990647"}


id: PBO:0044100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A8","termid":"PBO:0044100"}


id: MONDO:0009291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glycogen debranching enzyme (GDE) deficiency, or glycogen storage disease type 3 (GSD 3), is a form of glycogen storage disease characterized by severe muscle weakness and hepatopathy.","definition_xrefs":["Orphanet:366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"glycogen storage disease III","secondary_identifiers":["NANDO:1200844","MEDGEN:6641","NCIT:C84736","MESH:D006010","UMLS:C0017922","DOID:2748","NANDO:2200539","GARD:9442","SCTID:66937008","NANDO:1200826","NANDO:1201019","OMIM:232400","MedDRA:10053250"],"synonyms":[{"name":"AGL glycogen storage disease","type":"exact"},{"name":"Agl deficiency","type":"related"},{"name":"Cori disease","type":"exact"},{"name":"Cori-Forbes disease","type":"exact"},{"name":"Forbes disease","type":"exact"},{"name":"GDE deficiency","type":"exact"},{"name":"GSD due to glycogen debranching enzyme deficiency","type":"exact"},{"name":"GSD type 3","type":"exact"},{"name":"GSD3","type":"related"},{"name":"GSDIII","type":"exact"},{"name":"Gde deficiency","type":"related"},{"name":"amylo 1,6 glucosidase deficiency","type":"exact"},{"name":"amylo-1,6-glucosidase deficiency","type":"exact"},{"name":"deficiency of debranching enzyme","type":"exact"},{"name":"deficiency of dextrin","type":"exact"},{"name":"glycogen Debrancher deficiency","type":"related"},{"name":"glycogen storage disease 3","type":"related"},{"name":"glycogen storage disease III","type":"exact"},{"name":"glycogen storage disease IIIC","type":"related"},{"name":"glycogen storage disease IIID","type":"related"},{"name":"glycogen storage disease IIIa","type":"related"},{"name":"glycogen storage disease IIIb","type":"related"},{"name":"glycogen storage disease caused by mutation in AGL","type":"exact"},{"name":"glycogen storage disease due to glycogen debranching enzyme deficiency","type":"related"},{"name":"glycogen storage disease type 3","type":"exact"},{"name":"glycogen storage disease type III","type":"exact"},{"name":"glycogen storage disease, type III","type":"exact"},{"name":"glycogenosis due to glycogen debranching enzyme deficiency","type":"exact"},{"name":"glycogenosis type 3","type":"exact"},{"name":"glycogenosis type III","type":"exact"},{"name":"limit dextrinosis","type":"exact"}],"termid":"MONDO:0009291","xrefs":{"Monarch":{"xref_id":"0009291"}}}


id: PBO:0066763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 61","termid":"PBO:0066763"}


id: GO:0051613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of serotonin into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter uptake","termid":"GO:0051582"},{"relation_name":"is_a","term_name":"regulation of serotonin uptake","termid":"GO:0051611"},{"relation_name":"positively_regulates","term_name":"serotonin uptake","termid":"GO:0051610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of serotonin uptake","synonyms":[{"name":"activation of serotonin uptake","type":"narrow"},{"name":"positive regulation of 5-HT uptake","type":"exact"},{"name":"positive regulation of 5-hydroxytryptamine uptake","type":"exact"},{"name":"positive regulation of 5HT uptake","type":"exact"},{"name":"positive regulation of serotonin import","type":"exact"},{"name":"stimulation of serotonin uptake","type":"narrow"},{"name":"up regulation of serotonin uptake","type":"exact"},{"name":"up-regulation of serotonin uptake","type":"exact"},{"name":"upregulation of serotonin uptake","type":"exact"}],"termid":"GO:0051613"}


id: PBO:0004890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA specific adenosine deaminase (predicted)","termid":"PBO:0004890"}


id: FYPO:0007780
data:
  {"alleles_by_uniquename":{"SJAG_00124:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00124","name":"SJAG_00124delta","uniquename":"SJAG_00124:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-3":{"allele_type":"other","description":"Pmk1 from S. pombe","gene_uniquename":"SJAG_04551","name":"Pmk1Sp","uniquename":"SJAG_04551:allele-3"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121320],"is_not":false,"summary":null,"term":"FYPO:0007780"}],"single_locus_phenotype":[{"annotations":[121308,121324,121329,121332,121347,121633,121635],"is_not":false,"summary":null,"term":"FYPO:0007780"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the mycelium formed by fission yeast undergoing hyphal growth covers a smaller area than normal.","definition_xrefs":["PMID:31150379","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal hyphal growth","termid":"FYPO:0007773"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_01787":null,"SJAG_02013":null,"SJAG_04551":null,"SJAG_04697":null},"genotype_count":8,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(Pmk1 from S. pombe)","display_uniquename":"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-3","expression":"Not assayed or wild type"}]}]},"SJAG_00124delta":{"display_name":"SJAG_00124delta","display_uniquename":"SJAG_00124delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00124:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"pck1delta__pmk1delta":{"display_name":"pck1delta pmk1delta","display_uniquename":"pck1delta__pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]},"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0007773"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0007773"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01787","SJAG_04551"],"name":"decreased mycelial expansion","references_by_uniquename":{"PMID:31150379":null,"PMID:34198697":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_02013","SJAG_00124","SJAG_04551","SJAG_04697"],"single_locus_genotype_uniquenames":["Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","gms1delta","SJAG_00124delta","pyp1delta","pmk1delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type"],"termid":"FYPO:0007780","terms_by_termid":{"FYECO:0000137":null,"FYECO:0000314":null,"FYPO:0007780":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:2000968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell wall polysaccharide catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of cell wall polysaccharide catabolic process","termid":"GO:2000966"},{"relation_name":"positively_regulates","term_name":"cell wall polysaccharide catabolic process","termid":"GO:0044347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell wall polysaccharide catabolic process","synonyms":[{"name":"positive regulation of cell wall polysaccharide breakdown","type":"exact"}],"termid":"GO:2000968"}


id: GO:0039017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within the pronephros to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pattern specification involved in pronephros development","synonyms":[{"name":"pattern specification involved in pronephric kidney development","type":"exact"}],"termid":"GO:0039017"}


id: MONDO:0010868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited rippling muscle disease","termid":"MONDO:0020704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"rippling muscle disease 1","secondary_identifiers":["OMIM:600332","GARD:9165","DOID:0070308","UMLS:C1838254","MEDGEN:324987"],"synonyms":[{"name":"RMD1","type":"exact"},{"name":"rippling muscle disease 1","type":"exact"},{"name":"rippling muscle disease, 1","type":"related"},{"name":"rippling muscle disease-1","type":"exact"}],"termid":"MONDO:0010868","xrefs":{"Monarch":{"xref_id":"0010868"}}}


id: PBO:0040479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 2","termid":"PBO:0040479"}


id: PBO:0046855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid desaturase 3","termid":"PBO:0046855"}


id: PBO:0032703
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_histone_H3_in_cell","termid":"PBO:0032703"}


id: PBO:0049402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUCA1ANB-GUCA1A readthrough","termid":"PBO:0049402"}


id: PR:Q09784
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trs33 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G6.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.05c","synonyms":[{"name":"Spom972h-trs33","type":"exact"}],"termid":"PR:Q09784"}


id: GO:0060060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the retina is generated and organized in a camera-type eye during the post-embryonic life stage.","definition_xrefs":["GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"retina morphogenesis in camera-type eye","termid":"GO:0060042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic retina morphogenesis in camera-type eye","termid":"GO:0060060"}


id: MONDO:0045031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete infectious diarrheal disease (obsolete MONDO:0045031)","termid":"MONDO:0045031","xrefs":{"Monarch":{"xref_id":"0045031"}}}


id: SO:0001121
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of two consecutive residues with dihedral angles: Residue(i): +20 degrees < phi < +140 degrees, -40 degrees < psi < +90 degrees. Residue(i+1): -140 degrees < phi < -20 degrees, -90 degrees < psi < +40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_nest_motif","termid":"SO:0001120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_nest_left_right_motif","secondary_identifiers":["BS:00224"],"synonyms":[{"name":"nest_left_right","type":"exact"},{"name":"nest_lr","type":"exact"},{"name":"polypeptide nest left right motif","type":"exact"}],"termid":"SO:0001121"}


id: PBO:0015220
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homooligomeric","termid":"PBO:0015220"}


id: PR:Q10136
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ste7 gene.","definition_xrefs":["UniProtKB:Q10136","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ste7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23E2.03c","synonyms":[{"name":"Spom972h-ste7","type":"exact"}],"termid":"PR:Q10136"}


id: GO:0031397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the addition of ubiquitin groups to a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein ubiquitination","termid":"GO:0031396"},{"relation_name":"is_a","term_name":"negative regulation of protein modification by small protein conjugation or removal","termid":"GO:1903321"},{"relation_name":"negatively_regulates","term_name":"protein ubiquitination","termid":"GO:0016567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"negatively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"negative regulation of protein ubiquitination","synonyms":[{"name":"down regulation of protein ubiquitination","type":"exact"},{"name":"down-regulation of protein ubiquitination","type":"exact"},{"name":"downregulation of protein ubiquitination","type":"exact"},{"name":"inhibition of protein ubiquitination","type":"narrow"}],"termid":"GO:0031397"}


id: FYPO:0001088
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a glucosyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal glucosyltransferase activity","termid":"FYPO:0001087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"decreased glucosyltransferase activity","synonyms":[{"name":"reduced glucosyltransferase activity","type":"exact"}],"termid":"FYPO:0001088"}


id: PATO:0002402
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Multiple lesions some interconnecting with each other.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-localised","termid":"PATO:0001791"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifocal to coalescing","termid":"PATO:0002402"}


id: PBO:0109815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory particle assembly factor Nas2","termid":"PBO:0109815"}


id: PBO:0056431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 4","termid":"PBO:0056431"}


id: GO:0047898
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formate + ferricytochrome b1 = CO2 + ferrocytochrome b1.","definition_xrefs":["EC:1.2.2.1","MetaCyc:FORMATE-DEHYDROGENASE-CYTOCHROME-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor","termid":"GO:0016622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"formate dehydrogenase (cytochrome) activity","secondary_identifiers":["RHEA:21520"],"synonyms":[{"name":"formate:cytochrome b1 oxidoreductase activity","type":"related"},{"name":"formate:ferricytochrome-b1 oxidoreductase activity","type":"related"}],"termid":"GO:0047898"}


