# terms

id: MONDO:0004948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"B-cell chronic lymphocytic leukemia (B-CLL) is a type of B-cell non-Hodgkin lymphoma, and the most common form of leukemia in Western countries, affecting elderly adults (mean age of 67 and 72 years) with a slight male predominance (1.7:1), and characterized by a highly variable clinical presentation that can include asymptomatic disease or non-specific B-symptoms such as unintentional weight loss, severe fatigue, fever (without evidence of infection), and night sweats as well as cervical lymphadenopathy, splenomegaly and frequent infections. Some patients can also develop autoimmune complications such as autoimmune hemolytic anemia or immune thrombocytopenia. The clinical course is extremely heterogeneous with survival ranging from a few months to several decades.","definition_xrefs":["Orphanet:67038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic leukemia","termid":"MONDO:0001014"},{"relation_name":"is_a","term_name":"neoplasm of mature B-cells","termid":"MONDO:0004949"},{"relation_name":"is_a","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"},{"relation_name":"is_a","term_name":"indolent B-cell non-Hodgkin lymphoma","termid":"MONDO:0017594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"B-cell chronic lymphocytic leukemia","secondary_identifiers":["GARD:6104","MedDRA:10008958","MEDGEN:44120","OMIM:151400","NCIT:C3163","ICD9:204.1","MESH:D015451","UMLS:C0023434","DOID:1040","EFO:0000095","NORD:971"],"synonyms":[{"name":"B cell CLL","type":"exact"},{"name":"B cell chronic lymphocytic leukaemia","type":"exact"},{"name":"B cell chronic lymphocytic leukemia","type":"exact"},{"name":"B cell lymphocytic leukaemia","type":"exact"},{"name":"B cell lymphocytic leukemia","type":"exact"},{"name":"B-CLL","type":"exact"},{"name":"B-cell CLL","type":"exact"},{"name":"B-cell chronic lymphocytic leukemia","type":"exact"},{"name":"B-cell chronic lymphogenous leukaemia","type":"exact"},{"name":"B-cell chronic lymphogenous leukemia","type":"exact"},{"name":"B-cell chronic lymphoid leukaemia","type":"exact"},{"name":"B-cell chronic lymphoid leukemia","type":"exact"},{"name":"B-cell lymphocytic leukaemia","type":"exact"},{"name":"B-cell lymphocytic leukemia","type":"exact"},{"name":"BCLL","type":"exact"},{"name":"CLL","type":"exact"},{"name":"Chronic Lymphocytic Leukemia","type":"exact"},{"name":"chronic B-cell lymphocytic leukaemia","type":"exact"},{"name":"chronic B-cell lymphocytic leukemia","type":"exact"},{"name":"chronic lymphatic leukaemia","type":"exact"},{"name":"chronic lymphatic leukemia","type":"exact"},{"name":"chronic lymphocytic leukaemia","type":"exact"},{"name":"chronic lymphocytic leukaemia (CLL)","type":"exact"},{"name":"chronic lymphocytic leukemia","type":"exact"},{"name":"chronic lymphocytic leukemia (CLL)","type":"exact"},{"name":"chronic lymphogenous leukaemia","type":"exact"},{"name":"chronic lymphogenous leukemia","type":"exact"},{"name":"hematopoeitic - chronic lymphocytic leukaemia (CLL)","type":"exact"},{"name":"hematopoeitic - chronic lymphocytic leukemia (CLL)","type":"exact"},{"name":"leukemia, chronic LYMPHOCYTIC","type":"related"},{"name":"leukemia, chronic lymphatic","type":"related"},{"name":"leukemia, lymphocytic, chronic","type":"related"},{"name":"lymphoplasmacytic leukaemia","type":"exact"},{"name":"lymphoplasmacytic leukemia","type":"exact"},{"name":"small lymphocytic lymphoma","type":"related"}],"termid":"MONDO:0004948","xrefs":{"Monarch":{"xref_id":"0004948"}}}


id: SO:0001424
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A read produced by pyrosequencing technology.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrosequenced_read","synonyms":[{"name":"pyorsequenced read","type":"related"}],"termid":"SO:0001424"}


id: GO:0034284
data:
  {"annotated_genes":["SJAG_04026","SJAG_02444","SJAG_04312","SJAG_01699","SJAG_00472","SJAG_00574","SJAG_03081","SJAG_01754","SJAG_01254"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103779,117535,110984,96112,108452,107856,118569,111495,108802],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monosaccharide stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to monosaccharide","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to monosaccharide stimulus","type":"exact"}],"termid":"GO:0034284","terms_by_termid":{"GO:0010619":null}}


id: PBO:0030390
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_cytoplasm_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0030390"}


id: MONDO:0003678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A history of myocardial infarction in the absence of clinical symptoms and positive electrocardiographic findings.","definition_xrefs":["NCIT:C35400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myocardial infarction","termid":"MONDO:0005068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"silent myocardial infarction","secondary_identifiers":["MEDGEN:83307","DOID:5854","SCTID:233843008","UMLS:C0340324"],"synonyms":[{"name":"silent myocardial infarction","type":"exact"}],"termid":"MONDO:0003678","xrefs":{"Monarch":{"xref_id":"0003678"}}}


id: MONDO:0003894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanotic schwannoma that affects the mediastinum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanotic neurilemmoma","termid":"MONDO:0002558"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediastinal melanocytic neurilemmoma","secondary_identifiers":["DOID:6484","UMLS:C1334668","MEDGEN:277352","NCIT:C6635"],"synonyms":[{"name":"mediastinal melanocytic schwannoma","type":"exact"},{"name":"mediastinal melanotic schwannoma","type":"exact"},{"name":"melanocytic neurilemmoma of mediastinum","type":"exact"},{"name":"melanocytic neurilemmoma of the mediastinum","type":"exact"},{"name":"melanocytic schwannoma of mediastinum","type":"exact"},{"name":"melanocytic schwannoma of the mediastinum","type":"exact"}],"termid":"MONDO:0003894","xrefs":{"Monarch":{"xref_id":"0003894"}}}


id: FYPO:0001538
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of potassium ion measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular potassium level","synonyms":[{"name":"normal cellular potassium accumulation","type":"related"},{"name":"normal cellular potassium ion level","type":"exact"},{"name":"normal cellular potassium level during mitotic cell cycle","type":"related"},{"name":"normal cellular potassium level during vegetative growth","type":"exact"}],"termid":"FYPO:0001538"}


id: GO:0042152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reverse transcription of an RNA molecule followed by recombination between the resultant cDNA and its homologous chromosomal allele.","definition_xrefs":["PMID:8380627","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"RNA-mediated DNA recombination","termid":"GO:0042152"}


id: PBO:0066008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RALGPS2 antisense RNA 1","termid":"PBO:0066008"}


id: PBO:0062995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl arginine deiminase 1","termid":"PBO:0062995"}


id: GO:0006478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sulfation of peptidyl-tyrosine residues to form peptidyl-O4'-sulfo-L-tyrosine.","definition_xrefs":["RESID:AA0172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein sulfation","termid":"GO:0006477"},{"relation_name":"is_a","term_name":"peptidyl-tyrosine modification","termid":"GO:0018212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine sulfation","synonyms":[{"name":"peptidyl-tyrosine sulphation","type":"exact"}],"termid":"GO:0006478"}


id: MONDO:0001673
data:
  {"annotated_genes":["SJAG_03011","SJAG_04059","SJAG_01941","SJAG_00938","SJAG_02463","SJAG_04049"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88267,88266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014375"},{"annotations":[87308,87309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008964"},{"annotations":[87142,87141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009635"}]},"cv_name":"mondo","definition":"The condition of having at least three loose or liquid bowel movements each day.","definition_xrefs":["Wikipedia:Diarrhea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_01941":null,"SJAG_02463":null,"SJAG_03011":null,"SJAG_04049":null,"SJAG_04059":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diarrheal disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0002014","DOID:13250","ICD9:009.2","SCTID:111939009","MEDGEN:713159","SCTID:128333008","MESH:D003967","UMLS:C1290807","NCIT:C2987"],"synonyms":[{"name":"diarrhea","type":"exact"},{"name":"diarrhea of presumed infectious origin","type":"related"},{"name":"diarrheal disease","type":"exact"},{"name":"diarrheal disorder","type":"exact"},{"name":"diarrhoea","type":"exact"},{"name":"diarrhoea of presumed infectious origin","type":"related"},{"name":"frequent stools","type":"exact"},{"name":"loose stools","type":"exact"}],"termid":"MONDO:0001673","terms_by_termid":{"MONDO:0008964":null,"MONDO:0009635":null,"MONDO:0014375":null},"xrefs":{"Monarch":{"xref_id":"0001673"}}}


id: FYPO:0003456
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize methionine or purines, and therefore requires methionine and at least one purine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth auxotrophic for methionine","termid":"FYPO:0000040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for methionine and purine","synonyms":[{"name":"growth auxotrophic for methionine and purine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for methionine and purine during vegetative growth","type":"exact"},{"name":"methionine and purine auxotrophy","type":"exact"}],"termid":"FYPO:0003456"}


id: GO:0106098
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that acts both as N-acetylglutamate synthase (NAGS) catalysing the production of N-Acetylglutamate from glutamate and acetyl-CoA, and as N-acetylglutamate kinase (NAGK) catalysing the reaction ATP + N-acetyl-L-glutamate = ADP + N-acetyl-L-glutamyl 5-phosphate.","definition_xrefs":["PMID:11553611","GOC:lnp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetyltransferase complex","termid":"GO:0031248"},{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005739","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"NAGS/NAGK complex","termid":"GO:0106098"}


id: PBO:0030093
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_vegetative_cell_population_growth","termid":"PBO:0030093"}


id: PBO:0078594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 7, Y-linked","termid":"PBO:0078594"}


id: GO:0003991
data:
  {"annotated_genes":["SJAG_00636"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73183],"is_not":false,"summary":null,"term":"GO:0003991"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + N-acetyl-L-glutamate = ADP + N-acetyl-L-glutamate-5-phosphate.","definition_xrefs":["EC:2.7.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"acetylglutamate kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:ACETYLGLUTKIN-RXN","RHEA:14629"],"synonyms":[{"name":"ATP:N-acetyl-L-glutamate 5-phosphotransferase activity","type":"related"},{"name":"N-acetylglutamate 5-phosphotransferase activity","type":"related"},{"name":"N-acetylglutamate kinase activity","type":"related"},{"name":"N-acetylglutamate phosphokinase activity","type":"related"},{"name":"N-acetylglutamic 5-phosphotransferase activity","type":"related"},{"name":"acetylglutamate phosphokinase activity","type":"related"}],"termid":"GO:0003991","terms_by_termid":{"GO:0003991":null}}


id: FYPO:0000768
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of valinomycin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002682","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"resistance to valinomycin","synonyms":[{"name":"resistance to valinomycin during mitotic cell cycle","type":"related"},{"name":"resistance to valinomycin during vegetative growth","type":"exact"},{"name":"resistant to valinomycin","type":"exact"}],"termid":"FYPO:0000768"}


id: PR:Q9USK1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A BolA-like protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized bolA-like protein C4B3.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.11c","secondary_identifiers":["UniProtKB:Q9USK1"],"synonyms":[{"name":"Spom972h-BOLA3","type":"exact"}],"termid":"PR:Q9USK1"}


id: FYPO:0001963
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of papulacandin B than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0002682","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to papulacandin B","synonyms":[{"name":"resistance to papulacandin B during mitotic cell cycle","type":"related"},{"name":"resistance to papulacandin B during vegetative growth","type":"exact"},{"name":"resistant to papulacandin B","type":"exact"}],"termid":"FYPO:0001963"}


id: GO:0010424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent transfer of a methyl group to C-5 or N-4 of a cytosine located within a CG sequence in a DNA molecule.","definition_xrefs":["GOC:dph","GOC:tb","PMID:17239600"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA methylation on cytosine within a CG sequence (obsolete GO:0010424)","synonyms":[{"name":"cytosine methylation within a CG sequence","type":"exact"}],"termid":"GO:0010424"}


id: GO:0052035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont activates, maintains or increases the frequency, rate or extent of the inflammatory response of the host organism; the inflammatory response is the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of host inflammatory response (obsolete GO:0052035)","synonyms":[{"name":"activation by symbiont of host inflammatory response","type":"narrow"},{"name":"positive regulation by organism of inflammatory response of other organism involved in symbiotic interaction","type":"broad"},{"name":"stimulation by symbiont of host inflammatory response","type":"narrow"},{"name":"up regulation by symbiont of host inflammatory response","type":"exact"},{"name":"up-regulation by symbiont of host inflammatory response","type":"exact"},{"name":"upregulation by symbiont of host inflammatory response","type":"exact"}],"termid":"GO:0052035"}


id: PBO:0082063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyisobutyryl-CoA hydrolase; member of a family of enoyl-CoA hydratase/isomerases; non-tagged protein is detected in highly purified mitochondria in high-throughput studies; phosphorylated; mutation affects fluid-phase endocytosis","termid":"PBO:0082063"}


id: PBO:0042361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD109 antisense RNA 1","termid":"PBO:0042361"}


id: PBO:0069238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 493, pseudogene","termid":"PBO:0069238"}


id: PBO:0078550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 40","termid":"PBO:0078550"}


id: PBO:0049605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 8","termid":"PBO:0049605"}


id: PBO:0004974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 protein family 9","termid":"PBO:0004974"}


id: CHEBI:30351
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2,2'-bipyridine","synonyms":[{"name":"2,2-dipyridyl","type":"exact"}],"termid":"CHEBI:30351"}


id: MONDO:0011323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any syndromic disease characterized by severe hypoplasia of the nose and eyes, palatal abnormalities, deficient taste and smell, inguinal hernias, hypogonadotropic hypogonadism with cryptorchidism, and normal intelligence that occurs due to variation in the SMCHD1 gene.","definition_xrefs":["OMIM:603457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arhinia, choanal atresia, and microphthalmia","secondary_identifiers":["MEDGEN:355084","Orphanet:2250","SCTID:720511000","MESH:C537429","UMLS:C1863878","Orphanet:1135"],"synonyms":[{"name":"BAMS","type":"exact"},{"name":"Bosma Arhinia Microphthalmia Syndrome","type":"exact"},{"name":"Bosma Henkin Christiansen syndrome","type":"exact"},{"name":"Bosma arhinia microphthalmia syndrome","type":"exact"},{"name":"Bosma arhinia-microphthalmia syndrome","type":"exact"},{"name":"Bosma-Henkin-Christiansen syndrome","type":"exact"},{"name":"arhinia choanal atresia microphthalmia","type":"exact"},{"name":"arrhinia-choanal atresia-microphthalmia syndrome","type":"exact"},{"name":"congenital absence of nose and anterior nasopharynx","type":"related"},{"name":"hyposmia-nasal and ocular hypoplasia-hypogonadotropic hypogonadism syndrome","type":"exact"}],"termid":"MONDO:0011323","xrefs":{"Monarch":{"xref_id":"0011323"}}}


id: GO:0043184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vascular endothelial growth factor receptor 2.","definition_xrefs":["GOC:st"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial growth factor receptor binding","termid":"GO:0005172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"vascular endothelial growth factor receptor 2 binding","synonyms":[{"name":"Flk-1 binding","type":"exact"},{"name":"KDR binding","type":"broad"},{"name":"VEGF receptor 2 binding","type":"exact"},{"name":"VEGFR 2 binding","type":"exact"},{"name":"kinase domain region binding","type":"exact"}],"termid":"GO:0043184"}


id: GO:1901168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 3-chlorocatechol.","definition_xrefs":["GOC:yaf","UniPathway:UPA00083","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound catabolic process","termid":"GO:0019614"},{"relation_name":"is_a","term_name":"3-chlorocatechol metabolic process","termid":"GO:1901167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"3-chlorocatechol catabolic process","synonyms":[{"name":"3-chlorocatechol breakdown","type":"exact"},{"name":"3-chlorocatechol catabolism","type":"exact"},{"name":"3-chlorocatechol degradation","type":"exact"}],"termid":"GO:1901168"}


id: GO:0090236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in somitogenesis (obsolete GO:0090236)","termid":"GO:0090236"}


id: MOD:01287
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["PubMed:15602776","PubMed:11857757","Unimod:364#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, heavy form","termid":"MOD:00789"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, heavy form - site K","synonyms":[{"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, heavy form","type":"related"},{"name":"ICPL:13C(6)","type":"related"}],"termid":"MOD:01287"}


id: GO:0061190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the progression of the sclerotome over time, from its initial formation to the mature structure. The sclerotome is the portion of the somite that will give rise to a vertebra.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"sclerotome development","termid":"GO:0061056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sclerotome development","termid":"GO:0061190"}


id: GO:1901929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving alpha-copaene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene metabolic process","termid":"GO:0051761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"alpha-copaene metabolic process","synonyms":[{"name":"alpha-copaene metabolism","type":"exact"}],"termid":"GO:1901929"}


id: GO:0060612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of adipose tissue over time, from its formation to the mature structure. Adipose tissue is specialized tissue that is used to store fat.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue development","termid":"GO:0061448"},{"relation_name":"part_of","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adipose tissue development","synonyms":[{"name":"adipogenesis","type":"related"}],"termid":"GO:0060612"}


id: FYPO:0004817
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA (such as siRNA) derived from antisense transcription of ribosomal DNA measured in a cell is lower than normal.","definition_xrefs":["PMID:25417108","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased antisense RNA level","termid":"FYPO:0004816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased rDNA antisense small RNA level","synonyms":[{"name":"decreased accumulation of rDNA antisense small RNAs","type":"related"},{"name":"decreased antisense small RNA at rDNA","type":"exact"},{"name":"decreased antisense transcription-derived small RNA level at rDNA","type":"exact"},{"name":"decreased rDNA antisense small RNA accumulation","type":"related"},{"name":"decreased rDNA antisense small RNA level during mitotic cell cycle","type":"related"},{"name":"decreased rDNA antisense small RNA level during vegetative growth","type":"exact"},{"name":"reduced rDNA antisense small RNA level","type":"exact"}],"termid":"FYPO:0004817"}


id: GO:1902485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to L-cysteine.","definition_xrefs":["PMID:12941942","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"L-cysteine binding","termid":"GO:1902485"}


id: PBO:0055622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3061","termid":"PBO:0055622"}


id: GO:2000781
data:
  {"annotated_genes":["SJAG_02104","SJAG_02058","SJAG_00823","SJAG_04457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95768,112159],"is_not":false,"summary":null,"term":"GO:2000781"},{"annotations":[112908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905168"},{"annotations":[109366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of double-strand break repair.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA repair","termid":"GO:0045739"},{"relation_name":"is_a","term_name":"regulation of double-strand break repair","termid":"GO:2000779"},{"relation_name":"positively_regulates","term_name":"double-strand break repair","termid":"GO:0006302"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00823":null,"SJAG_02058":null,"SJAG_02104":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of double-strand break repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000781","terms_by_termid":{"GO:1905168":null,"GO:2000781":null,"GO:2001034":null}}


id: GO:1902280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ATP-dependent RNA helicase activity.","definition_xrefs":["PMID:23721653","GOC:rb","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ATP-dependent activity","termid":"GO:0043462"},{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of RNA helicase activity","synonyms":[{"name":"regulation of ATP-dependent RNA helicase activity","type":"exact"}],"termid":"GO:1902280"}


id: PBO:0069669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 946, pseudogene","termid":"PBO:0069669"}


id: PBO:0001912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ING family homolog Png1","termid":"PBO:0001912"}


id: GO:1904678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an alpha-aminoacyl-tRNA.","definition_xrefs":["GO_REF:0000067","GOC:TermGenie","ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"alpha-aminoacyl-tRNA binding","synonyms":[{"name":"aminoacyl-tRNA binding","type":"related"}],"termid":"GO:1904678"}


id: PBO:0055340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2768","termid":"PBO:0055340"}


id: PBO:0038464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCA3 pseudogene 1","termid":"PBO:0038464"}


id: MONDO:0004962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Endometrial carcinoma is a carcinoma that arises from the endometrium (the lining of the uterus or womb). It is the result of the abnormal growth of cells that have the ability to invade or spread to other parts of the body. The first sign is most often vaginal bleeding not associated with a menstrual period. Other symptoms include pain with urination or sexual intercourse, or pelvic pain. Endometrial cancer occurs most commonly after menopause. In stage II the cancer has spread from the body of the uterus and is growing into the supporting connective tissue of the cervix (called the cervical stroma). The cancer has spread into connective tissue of the cervix, but has not spread outside the uterus.","definition_xrefs":["EFO:0000206"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete stage of disease (obsolete MONDO:0021007)","termid":"MONDO:0021007"},{"relation_name":"is_a","term_name":"endometrioid adenocarcinoma","termid":"MONDO:0005026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"stage II endometrioid carcinoma","termid":"MONDO:0004962","xrefs":{"Monarch":{"xref_id":"0004962"}}}


id: PBO:0076846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testin LIM domain protein","termid":"PBO:0076846"}


id: PBO:0052219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium calcium-activated channel subfamily U member 1","termid":"PBO:0052219"}


id: PBO:0046136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A2","termid":"PBO:0046136"}


id: PBO:0036153
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_methyltransferase_activity","termid":"PBO:0036153"}


id: GO:0061583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a colon epithelial cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"},{"relation_name":"is_a","term_name":"colon epithelial cell migration","termid":"GO:0061580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"colon epithelial cell chemotaxis","termid":"GO:0061583"}


id: MONDO:0044256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete skin/hair/eye pigmentation, variation in, 5 (obsolete MONDO:0044256)","secondary_identifiers":["OMIM:227240"],"synonyms":[{"name":"SHEP5","type":"related"},{"name":"skin/hair/eye pigmentation 5, Black/nonblack hair","type":"related"},{"name":"skin/hair/eye pigmentation 5, black/nonblack hair","type":"exact"},{"name":"skin/hair/eye pigmentation 5, dark/fair skin","type":"exact"},{"name":"skin/hair/eye pigmentation 5, dark/light eyes","type":"exact"},{"name":"skin/hair/eye pigmentation, variation IN, 5","type":"related"}],"termid":"MONDO:0044256","xrefs":{"Monarch":{"xref_id":"0044256"}}}


id: PBO:0090291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin complex STAG protein Rec11","termid":"PBO:0090291"}


id: GO:1905693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphatidic acid biosynthetic process.","definition_xrefs":["PMID:23767959","GO_REF:0000058","GOC:PARL","GOC:bc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid biosynthetic process","termid":"GO:0071071"},{"relation_name":"regulates","term_name":"phosphatidic acid biosynthetic process","termid":"GO:0006654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of phosphatidic acid biosynthetic process","synonyms":[{"name":"regulation of phosphatidic acid anabolism","type":"exact"},{"name":"regulation of phosphatidic acid biosynthesis","type":"exact"},{"name":"regulation of phosphatidic acid formation","type":"exact"},{"name":"regulation of phosphatidic acid synthesis","type":"exact"}],"termid":"GO:1905693"}


id: RO:0002455
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"mutualistically_interacts_with","termid":"RO:0002442"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pollinates","termid":"RO:0002455"}


id: GO:0008761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine = UDP-N-acetyl-D-mannosamine.","definition_xrefs":["EC:5.1.3.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine 2-epimerase activity","secondary_identifiers":["MetaCyc:UDPGLCNACEPIM-RXN","RHEA:17213","Reactome:R-HSA-4085021","Reactome:R-HSA-4088338"],"synonyms":[{"name":"UDP-GlcNAc-2-epimerase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine 2-epimerase activity","type":"related"},{"name":"UDP-N-acetylglucosamine 2'-epimerase activity","type":"related"},{"name":"uridine diphosphate-N-acetylglucosamine-2'-epimerase activity","type":"related"},{"name":"uridine diphospho-N-acetylglucosamine 2'-epimerase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine 2'-epimerase activity","type":"related"}],"termid":"GO:0008761"}


id: PBO:0089275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconolactonase Pgk1","termid":"PBO:0089275"}


id: GO:0008480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sarcosine + H2O + electron-transfer flavoprotein = glycine + formaldehyde + reduced electron-transfer flavoprotein.","definition_xrefs":["EC:1.5.8.3","RHEA:19793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, flavin as acceptor","termid":"GO:0046997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"sarcosine dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R00611","MetaCyc:SARCOSINE-DEHYDROGENASE-RXN","Reactome:R-HSA-6797913"],"synonyms":[{"name":"monomethylglycine dehydrogenase activity","type":"related"},{"name":"sarcosine N-demethylase activity","type":"related"},{"name":"sarcosine:(acceptor) oxidoreductase (demethylating)","type":"related"},{"name":"sarcosine:acceptor oxidoreductase (demethylating)","type":"related"}],"termid":"GO:0008480"}


id: MONDO:0005241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adrenocortical carcinoma (obsolete MONDO:0005241)","synonyms":[{"name":"obsolete adrenocortical carcinoma (disease)","type":"exact"}],"termid":"MONDO:0005241","xrefs":{"Monarch":{"xref_id":"0005241"}}}


id: GO:0102379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: steviolbioside + UDP-alpha-D-glucose = stevioside + UDP.","definition_xrefs":["RHEA:61744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"steviolbioside glucosyltransferase activity (stevioside forming)","secondary_identifiers":["MetaCyc:RXN-13514"],"termid":"GO:0102379"}


id: PBO:0081143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP57 zinc finger protein","termid":"PBO:0081143"}


id: FYPO:0004742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the outer repeat region of the centromere is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin silencing at centromere","termid":"FYPO:0002360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal chromatin silencing at centromere outer repeat","synonyms":[{"name":"normal centromere outer repeat region chromatin silencing","type":"exact"},{"name":"normal chromatin silencing at centromere otr","type":"exact"},{"name":"normal chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"normal chromatin silencing at centromere outer repeat region during mitotic cell cycle","type":"related"},{"name":"normal chromatin silencing at centromere outer repeat region during vegetative growth","type":"exact"},{"name":"normal chromatin silencing at centromeric outer repeat region","type":"exact"},{"name":"normal chromatin silencing at pericentric region","type":"related"},{"name":"normal chromatin silencing at pericentromeric region","type":"related"},{"name":"normal heterochromatic silencing at centromere outer repeat region","type":"exact"},{"name":"normal heterochromatin silencing at centromere outer repeat region","type":"exact"}],"termid":"FYPO:0004742"}


id: PATO:0002467
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer resembling a thin narrow strip.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lathlike","termid":"PATO:0002467"}


id: GO:0034122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor signaling pathway","termid":"GO:0034121"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor signaling pathway","termid":"GO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor signaling pathway","synonyms":[{"name":"negative regulation of TLR signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0034122"}


id: PBO:0090730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S12 Mrps12a","termid":"PBO:0090730"}


id: PBO:0071191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 32","termid":"PBO:0071191"}


id: MONDO:0018948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary neuromuscular disorder characterized by multiple cores on muscle biopsy and clinical features of a congenital myopathy.","definition_xrefs":["Orphanet:598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of selenoprotein N1","termid":"MONDO:0016197"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiminicore myopathy","secondary_identifiers":["GARD:16536","DOID:0080991","NANDO:2200871","SCTID:55133004","NANDO:1200480","MEDGEN:75731","UMLS:C0270962"],"synonyms":[{"name":"MmD","type":"exact"},{"name":"multicore disease","type":"exact"},{"name":"multicore myopathy","type":"exact"},{"name":"multiminicore disease","type":"exact"}],"termid":"MONDO:0018948","xrefs":{"Monarch":{"xref_id":"0018948"}}}


id: PBO:0011454
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"k_cat(x10-5sec-1) for base excision activity of 1,N(6)-ethenoadenine = 5.3","termid":"PBO:0011454"}


id: GO:1904441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of thyroid gland epithelial cell proliferation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:17646383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"thyroid gland epithelial cell proliferation","termid":"GO:1990789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of thyroid gland epithelial cell proliferation","synonyms":[{"name":"regulation of Hurthle cell proliferation","type":"narrow"},{"name":"regulation of thyroid follicular cell proliferation","type":"narrow"}],"termid":"GO:1904441"}


id: GO:2001133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a methane from a methanethiol.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"methane biosynthetic process from methanethiol","termid":"GO:2001133"}


id: GO:0070777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-aspartate, the D-enantiomer of the anion of (2R)-2-aminobutanedioic acid  is transported across a lipid bilayer, from one side of a membrane to the other, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate transmembrane transport","termid":"GO:0015810"},{"relation_name":"is_a","term_name":"D-amino acid transport","termid":"GO:0042940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"D-aspartate transmembrane transport","termid":"GO:0070777"}


id: MONDO:0000310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Alkhumra hemorrhagic fever virus.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kyasanur forest disease","termid":"MONDO:0017881"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alkhurma hemorrhagic fever","secondary_identifiers":["DOID:0050308","UMLS:C5230236","MEDGEN:1684673"],"synonyms":[{"name":"Alkhumra hemorrhagic fever virus caused disease or disorder","type":"exact"},{"name":"Alkhumra hemorrhagic fever virus disease or disorder","type":"exact"},{"name":"Alkhumra hemorrhagic fever virus infectious disease","type":"exact"}],"termid":"MONDO:0000310","xrefs":{"Monarch":{"xref_id":"0000310"}}}


id: GO:0033352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-D-apiose, uridinediphosphoapicose, a substance composed of apiose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["MetaCyc:PWY-5113","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"UDP-D-apiose metabolic process","termid":"GO:0033351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"UDP-D-apiose biosynthetic process","synonyms":[{"name":"UDP-D-apiose anabolism","type":"exact"},{"name":"UDP-D-apiose biosynthesis","type":"exact"},{"name":"UDP-D-apiose formation","type":"exact"},{"name":"UDP-D-apiose synthesis","type":"exact"}],"termid":"GO:0033352"}


id: PBO:0039631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyloxyacyl hydrolase","termid":"PBO:0039631"}


id: PBO:0086101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for accurate chromosome segregation during meiosis; involved in meiotic telomere clustering (bouquet formation) and telomere-led rapid prophase movements; functions with meiosis-specific telomere-binding protein Ndj1p; CSM4 has a paralog, MPS2, that arose from the whole genome duplication","termid":"PBO:0086101"}


id: PBO:0090120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Hsr1","termid":"PBO:0090120"}


id: MONDO:0971093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"MGP-related spondyloepiphyseal dysplasia","secondary_identifiers":["Orphanet:664377","MEDGEN:1864357","UMLS:C5925072"],"termid":"MONDO:0971093","xrefs":{"Monarch":{"xref_id":"0971093"}}}


id: PBO:0040772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 7","termid":"PBO:0040772"}


id: GO:0005916
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-cell junction that contains the transmembrane protein N-cadherin, which interacts with identical molecules from neighbouring cells to form a tight mechanical intercellular link; forms a large portion of the intercalated disc, the structure at which myofibrils terminate in cardiomyocytes.","definition_xrefs":["PMID:11732910","GOC:mtg_muscle","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"},{"relation_name":"part_of","term_name":"intercalated disc","termid":"GO:0014704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"fascia adherens","secondary_identifiers":["Wikipedia:Fascia_adherens"],"termid":"GO:0005916"}


id: PBO:0080776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related 7","termid":"PBO:0080776"}


id: FYPO:0000876
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000866"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 dimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 dimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000876"}


id: PBO:0042591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 4","termid":"PBO:0042591"}


id: FYPO:0001601
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the vacuole differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"altered level of substance in vacuole","synonyms":[{"name":"abnormal level of substance in vacuole","type":"exact"},{"name":"abnormal level of substance in vacuole during vegetative growth","type":"exact"},{"name":"abnormal vacuolar level of substance","type":"exact"},{"name":"altered level of substance in vacuole during mitotic cell cycle","type":"related"},{"name":"altered vacuolar level of substance","type":"exact"}],"termid":"FYPO:0001601"}


id: PBO:0089266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial MutS protein Msh1","termid":"PBO:0089266"}


id: MONDO:0002115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pancreatic cancer (obsolete MONDO:0002115)","termid":"MONDO:0002115","xrefs":{"Monarch":{"xref_id":"0002115"}}}


id: MONDO:0031199
data:
  {"annotated_genes":["SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800029"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"inherited interstitial lung disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:619611"],"termid":"MONDO:0031199","terms_by_termid":{"MONDO:0800029":null},"xrefs":{"Monarch":{"xref_id":"0031199"}}}


id: MONDO:0014057
data:
  {"annotated_genes":["SJAG_02433"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86946],"is_not":false,"summary":null,"term":"MONDO:0014057"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intermediate maple syrup urine disease","termid":"MONDO:0017052"},{"relation_name":"is_a","term_name":"maple syrup urine disease","termid":"MONDO:0009563"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02433":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"maple syrup urine disease, mild variant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3554575","MEDGEN:767489","GARD:18388","OMIM:615135"],"synonyms":[{"name":"MSUDMV","type":"related"},{"name":"maple syrup urine disease, mild variant","type":"exact"}],"termid":"MONDO:0014057","terms_by_termid":{"MONDO:0014057":null},"xrefs":{"Monarch":{"xref_id":"0014057"}}}


id: PBO:0063457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide deformylase, mitochondrial","termid":"PBO:0063457"}


id: MONDO:0004368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the sphenoorbital region.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull base meningioma","termid":"MONDO:0002998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphenoorbital meningioma","secondary_identifiers":["MEDGEN:233458","DOID:7819","NCIT:C5285","UMLS:C1336040"],"termid":"MONDO:0004368","xrefs":{"Monarch":{"xref_id":"0004368"}}}


id: MONDO:1011853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurological syndrome, non-human animal","secondary_identifiers":["OMIA:000720"],"termid":"MONDO:1011853","xrefs":{"Monarch":{"xref_id":"1011853"}}}


id: GO:2000675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of type B pancreatic cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell apoptotic process","termid":"GO:1904036"},{"relation_name":"is_a","term_name":"regulation of type B pancreatic cell apoptotic process","termid":"GO:2000674"},{"relation_name":"negatively_regulates","term_name":"type B pancreatic cell apoptotic process","termid":"GO:0097050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type B pancreatic cell apoptotic process","synonyms":[{"name":"negative regulation of pancreatic B cell apoptosis","type":"exact"},{"name":"negative regulation of pancreatic beta cell apoptosis","type":"exact"},{"name":"negative regulation of type B pancreatic cell apoptosis","type":"narrow"}],"termid":"GO:2000675"}


id: MONDO:0011070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any van Maldergem syndrome in which the cause of the disease is a mutation in the DCHS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"van Maldergem syndrome","termid":"MONDO:0017813"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"van Maldergem syndrome 1","secondary_identifiers":["MEDGEN:1644627","DOID:0080585","OMIM:601390","UMLS:C4551950"],"synonyms":[{"name":"Cerebrofacioarticular syndrome","type":"related"},{"name":"DCHS1 van Maldergem syndrome","type":"exact"},{"name":"VAN Maldergem syndrome 1","type":"related"},{"name":"VMLDS1","type":"related"},{"name":"Van Maldergem syndrome type 1","type":"exact"},{"name":"van Maldergem syndrome 1","type":"exact"},{"name":"van Maldergem syndrome caused by mutation in DCHS1","type":"exact"}],"termid":"MONDO:0011070","xrefs":{"Monarch":{"xref_id":"0011070"}}}


id: GO:0046374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving teichoic acid, any polymer occurring in the cell wall, membrane or capsule of Gram-positive bacteria and containing chains of glycerol phosphate or ribitol phosphate residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"teichoic acid metabolic process","synonyms":[{"name":"teichoic acid metabolism","type":"exact"}],"termid":"GO:0046374"}


id: PBO:0030210
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_protamine_sulfate","termid":"PBO:0030210"}


id: GO:0032338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of inhibin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocrine process","termid":"GO:0044060"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"inhibin secretion","termid":"GO:0032334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"regulation of inhibin secretion","termid":"GO:0032338"}


id: PBO:0072615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L24 domain containing 1 pseudogene 10","termid":"PBO:0072615"}


id: PBO:0049236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate metabotropic receptor 7","termid":"PBO:0049236"}


id: MONDO:0012254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple epiphyseal dysplasia, with miniepiphyses is a rare primary bone dysplasia disorder characterized by strikingly small secondary ossification centers (mini-epiphyses) in all or only some joints, resulting in severe bone dysplasia of the proximal femoral heads. Short stature, increased lumbar lordosis, genua vara and generalized joint laxity have also been reported.","definition_xrefs":["Orphanet:166032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple epiphyseal dysplasia","termid":"MONDO:0016648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"multiple epiphyseal dysplasia, with miniepiphyses","secondary_identifiers":["ICD10CM:Q77.3","MEDGEN:332176","GARD:17016","OMIM:609325","MESH:C563735","UMLS:C1836307"],"synonyms":[{"name":"epiphyseal dysplasia, multiple, with miniepiphyses","type":"related"}],"termid":"MONDO:0012254","xrefs":{"Monarch":{"xref_id":"0012254"}}}


id: PBO:0053763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1005","termid":"PBO:0053763"}


id: GO:1901834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of deadenylation-independent decapping of nuclear-transcribed mRNA.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA metabolic process","termid":"GO:1903311"},{"relation_name":"regulates","term_name":"deadenylation-independent decapping of nuclear-transcribed mRNA","termid":"GO:0031087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"regulation of deadenylation-independent decapping of nuclear-transcribed mRNA","synonyms":[{"name":"regulation of deadenylation-independent decapping of nuclear mRNA","type":"related"},{"name":"regulation of deadenylylation-independent decapping","type":"exact"}],"termid":"GO:1901834"}


id: GO:0003051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The drinking behavior that is mediated by the action of angiotensin in the brain. Angiotensin stimulates the brain centers that control thirst.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"drinking behavior","termid":"GO:0042756"},{"relation_name":"part_of","term_name":"brain renin-angiotensin system","termid":"GO:0002035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angiotensin-mediated drinking behavior","synonyms":[{"name":"angiotensin mediated drinking behavior","type":"exact"}],"termid":"GO:0003051"}


id: GO:0017026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of the C-terminal propeptide at Ala-Asp in type I and II procollagens and at Arg-Asp in type III.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete procollagen C-endopeptidase activity (obsolete GO:0017026)","synonyms":[{"name":"BMP1","type":"narrow"},{"name":"carboxyprocollagen peptidase activity","type":"related"},{"name":"procollagen C-endopeptidase activity","type":"exact"},{"name":"procollagen C-proteinase activity","type":"related"},{"name":"procollagen C-terminal peptidase activity","type":"related"},{"name":"procollagen C-terminal proteinase activity","type":"related"},{"name":"procollagen carboxy-terminal proteinase activity","type":"related"},{"name":"procollagen carboxypeptidase activity","type":"related"},{"name":"procollagen peptidase activity","type":"related"}],"termid":"GO:0017026"}


id: PBO:0063613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 4","termid":"PBO:0063613"}


id: PR:O74737
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rid1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-binding protein rid1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.12","synonyms":[{"name":"Spom972h-rid1","type":"exact"}],"termid":"PR:O74737"}


id: MONDO:0041167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A life-threatening complication of carcinoid syndrome, and is generally found in people who already have carcinoid syndrome. The crisis may occur suddenly, or it can be associated with stress, chemotherapy, or anesthesia.","direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoid syndrome","termid":"MONDO:0100347"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carcinoid crisis","secondary_identifiers":["UMLS:C0342569","MEDGEN:575107","SCTID:237833006"],"synonyms":[{"name":"carcinoid crisis","type":"exact"}],"termid":"MONDO:0041167","xrefs":{"Monarch":{"xref_id":"0041167"}}}


id: PR:O14356
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tor1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 3-kinase tor1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.10c","synonyms":[{"name":"PI3-kinase tor1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PI3K tor1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns-3-kinase tor1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tor1","type":"exact"}],"termid":"PR:O14356"}


id: MONDO:0015555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"maculopapular cutaneous mastocytosis","termid":"MONDO:0019316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"plaque-form urticaria pigmentosa","secondary_identifiers":["Orphanet:158769","MEDGEN:1843438","GARD:20034","UMLS:C5680682"],"termid":"MONDO:0015555","xrefs":{"Monarch":{"xref_id":"0015555"}}}


id: PBO:0040765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 3","termid":"PBO:0040765"}


id: GO:0005912
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-cell junction composed of the epithelial cadherin-catenin complex. The epithelial cadherins, or E-cadherins, of each interacting cell extend through the plasma membrane into the extracellular space and bind to each other. The E-cadherins bind to catenins on the cytoplasmic side of the membrane, where the E-cadherin-catenin complex binds to cytoskeletal components and regulatory and signaling molecules.","definition_xrefs":["PMID:20571587","PMID:28096264","GOC:bc","PMID:21422226","GOC:aruk","GOC:mah","PMID:17854762","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"adherens junction","secondary_identifiers":["Wikipedia:Adherens_junction","GO:0005913"],"synonyms":[{"name":"cell-cell adherens junction","type":"exact"}],"termid":"GO:0005912"}


id: GO:0009400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Conveys a signal from an upstream receptor or intracellular signal transducer by catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.","definition_xrefs":["GOC:mah","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transducer, downstream of receptor, with serine/threonine phosphatase activity (obsolete GO:0009400)","synonyms":[{"name":"receptor signaling protein serine/threonine phosphatase activity","type":"exact"},{"name":"receptor signalling protein serine/threonine phosphatase activity","type":"exact"}],"termid":"GO:0009400"}


id: MONDO:0009837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Papilloma of the choroid plexus is a rare benign type of choroid plexus tumor, accounting for 1% of all brain tumors, often occurring in the fourth ventricle (in adults) and the lateral ventricle (in children) but sometimes arising ectopically in the brain parenchyma, and presenting with nausea, vomiting, papilledema, abnormal eye movements, as well as enlarged head circumference, seizures and gait impairment due to an increase in intracranial pressure.","definition_xrefs":["Orphanet:2807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papilloma","termid":"MONDO:0002363"},{"relation_name":"is_a","term_name":"benign choroid plexus neoplasm","termid":"MONDO:0044764"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choroid plexus papilloma","secondary_identifiers":["icd11.foundation:1696749652","OMIM:260500","NCIT:C3698","UMLS:C0205770","MEDGEN:64439","ICDO:9390/0","ONCOTREE:CPP","SCTID:425868004","MedDRA:10008777","GARD:4214","MESH:D020288","DOID:2626","NANDO:2200093"],"synonyms":[{"name":"choroid plexus papilloma NOS (morphologic abnormality)","type":"narrow"},{"name":"CPP","type":"related"},{"name":"childhood choroid plexus papilloma","type":"narrow"},{"name":"childhood papilloma of choroid plexus","type":"narrow"},{"name":"choroid plexus carcinoma","type":"related"},{"name":"choroid plexus papilloma","type":"exact"},{"name":"choroid plexus papilloma, no ICD-O subtype","type":"exact"},{"name":"paediatric papilloma of choroid plexus","type":"narrow"},{"name":"papilloma of choroid plexus","type":"related"},{"name":"papilloma of the choroid plexus","type":"exact"},{"name":"papilloma, choroid plexus, benign","type":"related"},{"name":"pediatric papilloma of choroid plexus","type":"narrow"}],"termid":"MONDO:0009837","xrefs":{"Monarch":{"xref_id":"0009837"}}}


id: MONDO:0030027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"essential tremor","termid":"MONDO:0003233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor, hereditary essential, 6","secondary_identifiers":["DOID:0081295","MEDGEN:1711112","UMLS:C5394329","OMIM:618866"],"synonyms":[{"name":"ETM6","type":"exact"},{"name":"TREMOR, HEREDITARY ESSENTIAL, 6","type":"exact"},{"name":"tremor, hereditary essential, 6","type":"exact"}],"termid":"MONDO:0030027","xrefs":{"Monarch":{"xref_id":"0030027"}}}


id: PBO:0030396
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nucleus:cytoplasm_ratio","termid":"PBO:0030396"}


id: PATO:0001576
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pressure which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"pressure","termid":"PATO:0001025"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased pressure","synonyms":[{"name":"high pressure","type":"exact"}],"termid":"PATO:0001576"}


id: MONDO:0850812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary immunodeficiency disease characterized by impaired function or reduced numbers of dendritic cells.","definition_xrefs":["DOID:0111963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"dendritic cell deficiency","secondary_identifiers":["UMLS:C4746814","MEDGEN:1656300"],"termid":"MONDO:0850812","xrefs":{"Monarch":{"xref_id":"0850812"}}}


id: PBO:0062749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily K member 1","termid":"PBO:0062749"}


id: GO:0002860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of natural killer cell mediated cytotoxicity directed against tumor cell target.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of natural killer cell mediated immune response to tumor cell","termid":"GO:0002857"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002858"},{"relation_name":"is_a","term_name":"positive regulation of natural killer cell mediated cytotoxicity","termid":"GO:0045954"},{"relation_name":"positively_regulates","term_name":"natural killer cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","synonyms":[{"name":"activation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"narrow"},{"name":"stimulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"narrow"},{"name":"up regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"up-regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"upregulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"exact"}],"termid":"GO:0002860"}


id: PBO:0039724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic subunit 3F","termid":"PBO:0039724"}


id: GO:1904915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of the localization of a protein-containing macromolecular complex to a telomere.","definition_xrefs":["GOC:TermGenie","PMID:26586433","GOC:BHF","GOC:rph","GO_REF:0000058","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of establishment of protein-containing complex localization to telomere","termid":"GO:1904913"},{"relation_name":"positively_regulates","term_name":"establishment of protein-containing complex localization to telomere","termid":"GO:0097695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of protein-containing complex localization to telomere","synonyms":[{"name":"activation of establishment of macromolecular complex localisation to telomere","type":"narrow"},{"name":"activation of establishment of macromolecular complex localization to telomere","type":"narrow"},{"name":"positive regulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"positive regulation of establishment of macromolecular complex localization to telomere","type":"related"},{"name":"up regulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"up regulation of establishment of macromolecular complex localization to telomere","type":"exact"},{"name":"up-regulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"up-regulation of establishment of macromolecular complex localization to telomere","type":"exact"},{"name":"upregulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"upregulation of establishment of macromolecular complex localization to telomere","type":"exact"}],"termid":"GO:1904915"}


id: FYECO:0000188
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which pantothenate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ pantothenate","termid":"FYECO:0000188"}


id: MONDO:0010750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ulnar hypoplasia-split foot syndrome is characterized by the association of severe ulnar hypoplasia, absence of fingers two to five, and split-foot. It has been described in four males belonging to two generations of the same family. X-linked recessive inheritance is suggested, but autosomal dominant transmission cannot be excluded.","definition_xrefs":["Orphanet:1122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"ulnar hypoplasia-split foot syndrome","secondary_identifiers":["UMLS:C1839123","MEDGEN:333256","OMIM:314360","MESH:C536936","GARD:5400"],"synonyms":[{"name":"Van De Berghe Dequeker syndrome","type":"related"},{"name":"Van den Berghe-Dequecker syndrome","type":"exact"},{"name":"complete absence of the ulna and of fingers 2 to 5, together with lobster-claw deformity of the feet","type":"related"},{"name":"familial ulnar aplasia and lobster claw syndrome","type":"related"},{"name":"severe ulnar aplasia and lobster claw feet","type":"related"},{"name":"ulnar hypoplasia lobster claw deformity of feet","type":"related"},{"name":"ulnar hypoplasia with lobster-claw deformity of feet","type":"related"},{"name":"ulnar hypoplasia-lobster-claw deformity of feet syndrome","type":"exact"}],"termid":"MONDO:0010750","xrefs":{"Monarch":{"xref_id":"0010750"}}}


id: PATO:0001623
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in a bearer by virtue of a part or parts of the bearer's being decreased in size due to reduction in tissue mass through wasting.","definition_xrefs":["Wikipedia:Atrophy","Wiikipedia:Wasting"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atrophied","synonyms":[{"name":"atrophic","type":"exact"}],"termid":"PATO:0001623"}


id: MONDO:0001959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear disorder","termid":"MONDO:0002467"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"labyrinthine bilateral reactive loss","secondary_identifiers":["UMLS:C0155520","DOID:14413","SCTID:194377001","ICD9:386.56","MEDGEN:510006"],"synonyms":[{"name":"bilateral loss of labyrinthine reactivity","type":"exact"},{"name":"loss of labyrinthine reactivity, bilateral","type":"exact"}],"termid":"MONDO:0001959","xrefs":{"Monarch":{"xref_id":"0001959"}}}


id: PBO:0001621
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nomencature conflict, prs1 is the primary name for SPBC19C7.06 using unified nomenclature for tRNA ligases","termid":"PBO:0001621"}


id: PBO:0065781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"QRSL1 pseudogene 1","termid":"PBO:0065781"}


id: MONDO:0018704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete actinomycosis (obsolete MONDO:0018704)","termid":"MONDO:0018704","xrefs":{"Monarch":{"xref_id":"0018704"}}}


id: PBO:0063674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 3 pseudogene 3","termid":"PBO:0063674"}


id: PR:P07527
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A kinase suppressor of Ras 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04425","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitosis inhibitor protein kinase wee1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.03","secondary_identifiers":["UniProtKB:P07527"],"synonyms":[{"name":"P107 protein kinase homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-KSR2","type":"exact"}],"termid":"PR:P07527"}


id: MONDO:0013981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic movement disorder characterized by autosomal dominant, adult-onset, slowly progressive, multifocal, cortical myoclonus. Patients present somatosensory-evoked, brief, jerky, involuntary movements in the face, arms and legs, associated in most of cases with sustained, multiple, sudden falls without loss of consciousness. Seizures or other neurological deficits, aside from mild cerebellar ataxia late in the course of the illness, are absent.","definition_xrefs":["Orphanet:319189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonus, familial","secondary_identifiers":["OMIMPS:614937","SCTID:763770005","GARD:17444"],"synonyms":[{"name":"FCM","type":"related"},{"name":"familial cortical myoclonus","type":"exact"},{"name":"familial myoclonus","type":"exact"},{"name":"myoclonus, familial cortical","type":"exact"}],"termid":"MONDO:0013981","xrefs":{"Monarch":{"xref_id":"0013981"}}}


id: PBO:0051323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/ORY-1 (pseudogene)","termid":"PBO:0051323"}


id: PBO:0028019
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_CAAX-protein_geranylgeranyltransferase_activity","termid":"PBO:0028019"}


id: MONDO:0044967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease or disorder that involves the limb.","definition_xrefs":["MONDO:design_pattern"],"gene_count":0,"genotype_count":0,"name":"obsolete limb disorder (obsolete MONDO:0044967)","secondary_identifiers":["ICD9:V49.1","SCTID:128605003"],"synonyms":[{"name":"disease of limb","type":"exact"},{"name":"disease or disorder of limb","type":"exact"},{"name":"disorder of extremity","type":"exact"},{"name":"disorder of limb","type":"exact"},{"name":"limb disease","type":"exact"},{"name":"limb disease or disorder","type":"exact"}],"termid":"MONDO:0044967","xrefs":{"Monarch":{"xref_id":"0044967"}}}


id: PBO:0054409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1805","termid":"PBO:0054409"}


id: PBO:0090739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Bos1","termid":"PBO:0090739"}


id: MONDO:0003696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete meningeal melanocytoma (obsolete MONDO:0003696)","termid":"MONDO:0003696","xrefs":{"Monarch":{"xref_id":"0003696"}}}


id: FYPO:0000732
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the mitotic spindle is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short spindle","termid":"FYPO:0000130"},{"relation_name":"is_a","term_name":"abnormal bipolar mitotic spindle","termid":"FYPO:0001574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000120"],"is_obsolete":false,"name":"short bipolar mitotic spindle","synonyms":[{"name":"decreased mitotic spindle length","type":"exact"},{"name":"short mitotic spindle","type":"exact"},{"name":"short mitotic spindle during vegetative growth","type":"exact"},{"name":"short mitotic spindles","type":"exact"},{"name":"short spindle during mitosis","type":"exact"},{"name":"short spindle during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000732"}


id: FYPO:0001459
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the level of transcription from a calcineurin-dependent response element (CDRE)-containing promoter is higher than normal in the absence of a calcium ion stimulus.","definition_xrefs":["PomBase:mah","PMID:21811607"],"gene_count":0,"genotype_count":0,"name":"obsolete increased basal transcription from CDRE promoter (obsolete FYPO:0001459)","synonyms":[{"name":"increased basal transcription from CDRE promoter during mitotic cell cycle","type":"related"},{"name":"increased basal transcription from CDRE promoter during vegetative growth","type":"exact"},{"name":"increased transcription from CRDE promoter in the absence of calcium","type":"exact"}],"termid":"FYPO:0001459"}


id: MONDO:0011741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Hirschsprung disease, susceptibility to","termid":"MONDO:0100179"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hirschsprung disease, susceptibility to, 6","secondary_identifiers":["MEDGEN:369600","OMIM:606874","UMLS:C1969837"],"synonyms":[{"name":"HSCR6","type":"exact"},{"name":"Hirschsprung disease, susceptibility to, 6","type":"exact"}],"termid":"MONDO:0011741","xrefs":{"Monarch":{"xref_id":"0011741"}}}


id: PBO:0076572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3 pseudogene 1","termid":"PBO:0076572"}


id: PBO:0069943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1236, pseudogene","termid":"PBO:0069943"}


id: PBO:0058657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6785","termid":"PBO:0058657"}


id: PBO:0069630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 907, pseudogene","termid":"PBO:0069630"}


id: MONDO:0004019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary endometrioid adenocarcinoma of the endometrium characterized by the presence of eosinophilic malignant glandular epithelial cells.","definition_xrefs":["NCIT:C27849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrium adenocarcinoma","termid":"MONDO:0005461"},{"relation_name":"is_a","term_name":"endometrial endometrioid adenocarcinoma","termid":"MONDO:0006192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"oxyphilic endometrial endometrioid adenocarcinoma","secondary_identifiers":["MEDGEN:309527","UMLS:C1518768","DOID:6865"],"synonyms":[{"name":"oxyphilic endometrial endometrioid adenocarcinoma","type":"exact"}],"termid":"MONDO:0004019","xrefs":{"Monarch":{"xref_id":"0004019"}}}


id: GO:0017093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds within a sterol regulatory element binding protein (SREBP). SREBPs are transcription factors that bind sterol regulatory elements (SREs), DNA motifs found in the promoters of target genes.","definition_xrefs":["GOC:bf","PMID:12923525"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol regulatory element-binding protein protease activity (obsolete GO:0017093)","synonyms":[{"name":"SREBP protease activity","type":"exact"},{"name":"sterol regulatory element-binding protein protease activity","type":"exact"}],"termid":"GO:0017093"}


id: MONDO:0045045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A broad classification of dysgammaglobulinemias characterized by low or undetectable serum levels of immunoglobulin class G (IgG). Deficiencies of IgG present variably according to subclass. IgG deficiencies are typically relative among subclasses and not absolute. Thus even with a given selective IgG subclass deficiency, total IgG levels may still fall within normal range. The clinical course and prognosis is dependent upon the severity of the deficiency and associated morbidity.","definition_xrefs":["NCIT:C27142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysgammaglobulinemia","termid":"MONDO:0001342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"selective IgG immunodeficiency","secondary_identifiers":["UMLS:C5234937","MEDGEN:1720114","NANDO:1200346","SCTID:12631000119106"],"synonyms":[{"name":"IgG deficiency","type":"related"},{"name":"IgG subclass deficiency","type":"related"},{"name":"selective IgG immunodeficiency","type":"exact"}],"termid":"MONDO:0045045","xrefs":{"Monarch":{"xref_id":"0045045"}}}


id: GO:0097618
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dinoflagellate sulcus that extends all the way to the posterior end of the cell (also known as antapex). The presence of a sulcal notch makes the dinoflagellate hypocone appear bilobed.","definition_xrefs":["Wikipedia:Dinoflagellate#Morphology","GOC:at","PMID:7002229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinoflagellate sulcus","termid":"GO:0097612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0009986"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0009986","GO:0005575"],"is_obsolete":false,"name":"dinoflagellate sulcal notch","synonyms":[{"name":"dinoflagellate sulcus notch","type":"exact"},{"name":"sulcal notch","type":"related"}],"termid":"GO:0097618"}


id: PBO:0082289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arginase, catabolizes arginine to ornithine and urea; expression responds to both induction by arginine and nitrogen catabolite repression; disruption decreases production of carcinogen ethyl carbamate during wine fermentation and also enhances freeze tolerance","termid":"PBO:0082289"}


id: PBO:0087687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the NuA4 acetyltransferase complex; this complex acetylates histone H4 and NuA3 acetyltransferase complex that acetylates histone H3","termid":"PBO:0087687"}


id: PBO:0041999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 50","termid":"PBO:0041999"}


id: PBO:0061017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIFK antisense RNA 1","termid":"PBO:0061017"}


id: MONDO:0017335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microtriplication 11q24.1 is an extremely rare partial autosomal tetrasomy, resulting from a partial triplication of the long arm of chromosome 11, characterized by intellectual disability (with severe verbal impairment), short stature with small extremities, keratoconus and distinctive facial features (round, course face, upward slanting palpebral fissures, mild synophris, large nose with thick ala nasi and triangular tip, large mouth with broad lips, short and smooth philtrum, large protruded chin, ears with adherent lobules). Additionally, patients are overweight and present hypercholesterolemia.","definition_xrefs":["Orphanet:289522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"chromosome 11q trisomy","termid":"MONDO:0022173"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtriplication 11q24.1","secondary_identifiers":["UMLS:C4749373","GARD:21142","MEDGEN:1656562"],"synonyms":[{"name":"tetrasomy 11q24.1","type":"exact"}],"termid":"MONDO:0017335","xrefs":{"Monarch":{"xref_id":"0017335"}}}


id: PBO:0076284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYF2 pre-mRNA splicing factor pseudogene 1","termid":"PBO:0076284"}


id: GO:0090238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of arachidonic acid secretion, the controlled release of arachidonic acid from a cell or a tissue.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of icosanoid secretion","termid":"GO:0032305"},{"relation_name":"is_a","term_name":"regulation of arachidonate secretion","termid":"GO:0090237"},{"relation_name":"positively_regulates","term_name":"arachidonate secretion","termid":"GO:0050482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of arachidonate secretion","synonyms":[{"name":"positive regulation of arachidonic acid secretion","type":"exact"}],"termid":"GO:0090238"}


id: GO:1900441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to neutral pH.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:1900440"},{"relation_name":"is_a","term_name":"negative regulation of filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:1900742"},{"relation_name":"negatively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:0036178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","synonyms":[{"name":"down regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"exact"},{"name":"down-regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"exact"},{"name":"downregulation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"exact"},{"name":"inhibition of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"narrow"}],"termid":"GO:1900441"}


id: MONDO:0030705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the prostate gland caused by Trichomonas vaginalis.","definition_xrefs":["NCIT:C35176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichomoniasis","termid":"MONDO:0002154"},{"relation_name":"is_a","term_name":"prostatitis","termid":"MONDO:0005280"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trichomonas prostatitis","secondary_identifiers":["UMLS:C0153315","ICD9:131.03","SCTID:71590000","MEDGEN:102261"],"synonyms":[{"name":"Trichomonas prostatitis","type":"exact"},{"name":"Trichomonas vaginalis caused prostatitis (disease)","type":"exact"},{"name":"Trichomonas vaginalis prostatitis (disease)","type":"exact"},{"name":"trichomonal prostatitis","type":"exact"}],"termid":"MONDO:0030705","xrefs":{"Monarch":{"xref_id":"0030705"}}}


id: MONDO:0016891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete partial deletion of the short arm of chromosome 9 (obsolete MONDO:0016891)","secondary_identifiers":["Orphanet:261929","icd11.foundation:924171107"],"termid":"MONDO:0016891","xrefs":{"Monarch":{"xref_id":"0016891"}}}


id: GO:0051851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an host alters or subverts a process in a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of process of another organism","termid":"GO:0035821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host-mediated perturbation of symbiont process","synonyms":[{"name":"modification by host of symbiont morphology or physiology","type":"related"},{"name":"modulation by host of symbiont process","type":"exact"}],"termid":"GO:0051851"}


id: MONDO:0024891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"meningitis","termid":"MONDO:0021108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-infectious meningitis","secondary_identifiers":["SCTID:230155003"],"synonyms":[{"name":"non-infective meningitis","type":"exact"}],"termid":"MONDO:0024891","xrefs":{"Monarch":{"xref_id":"0024891"}}}


id: MONDO:8000019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral vertigo","termid":"MONDO:0004900"},{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"},{"relation_name":"is_a","term_name":"inherited auditory system disease","termid":"MONDO:0037940"},{"relation_name":"is_a","term_name":"hereditary neuromuscular disease","termid":"MONDO:0100546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertigo, benign recurrent, 1","secondary_identifiers":["MESH:C567620","UMLS:C2749845","MEDGEN:412807"],"synonyms":[{"name":"BRV1","type":"exact"},{"name":"vertigo, benign recurrent, 1","type":"exact"}],"termid":"MONDO:8000019","xrefs":{"Monarch":{"xref_id":"8000019"}}}


id: PBO:0054394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1790","termid":"PBO:0054394"}


id: FYPO:0006419
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which sites at which the protein Rad51 accumulates remain present for longer than normal during the meiotic cell cycle. Normally, Rad51 foci form during prophase I but disappear before metaphase I.","definition_xrefs":["PomBase:mah","PMID:27304859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of Rad51 focus presence during meiotic cell cycle","synonyms":[{"name":"prolonged Rad51 focus presence during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006419"}


id: PBO:0075264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 17","termid":"PBO:0075264"}


id: FYECO:0000032
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which chloride ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Cl ions","synonyms":[{"name":"chloride ions added","type":"exact"}],"termid":"FYECO:0000032"}


id: GO:0033438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an ACC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0060090","GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ACC codon-amino acid adaptor activity","synonyms":[{"name":"threonine tRNA","type":"related"}],"termid":"GO:0033438"}


id: PBO:0072111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14","termid":"PBO:0072111"}


id: PBO:0062457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 130 pseudogene","termid":"PBO:0062457"}


id: MONDO:0011141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megaloblastic anemia-immunodeficiency due to folate transporter 1 deficiency","termid":"MONDO:0971066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"megaloblastic anemia, folate-responsive","secondary_identifiers":["UMLS:C2749656","MEDGEN:440842","OMIM:601775"],"synonyms":[{"name":"MEGAF","type":"exact"},{"name":"folate level in erythrocytes","type":"exact"}],"termid":"MONDO:0011141","xrefs":{"Monarch":{"xref_id":"0011141"}}}


id: PBO:0063923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide-3-kinase regulatory subunit 2","termid":"PBO:0063923"}


id: GO:0102263
data:
  {"annotated_genes":["SJAG_00174"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111609],"is_not":false,"summary":null,"term":"GO:0102263"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5,6-dihydrouracil17 in tRNA + NAD(P) = H+ + a uracil17 in tRNA + NAD(P)H.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA dihydrouridine synthase activity","termid":"GO:0017150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00174":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0140101","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"tRNA-dihydrouridine17 synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-12455"],"termid":"GO:0102263","terms_by_termid":{"GO:0102263":null}}


id: PBO:0031066
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination_with_normal,_unseptated_germ_tube_morphology","termid":"PBO:0031066"}


id: MONDO:1010095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Citrullinemia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citrullinemia, non-human animal","secondary_identifiers":["OMIA:000194"],"termid":"MONDO:1010095","xrefs":{"Monarch":{"xref_id":"1010095"}}}


id: PBO:0042122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 195","termid":"PBO:0042122"}


id: PBO:0073315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretion regulating guanine nucleotide exchange factor","termid":"PBO:0073315"}


id: MONDO:0004162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of leiomyoma arising from the uterine corpus. It is characterized by a dense cellular infiltrate composed of spindle or round cells with scant cytoplasm and a less obvious interlacing fascicle pattern.","definition_xrefs":["NCIT:C40163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular leiomyoma","termid":"MONDO:0003296"},{"relation_name":"is_a","term_name":"uterine corpus leiomyoma","termid":"MONDO:0007886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine corpus cellular leiomyoma","secondary_identifiers":["UMLS:C1519845","MEDGEN:276938","DOID:7242"],"synonyms":[{"name":"body of uterus cellular leiomyoma","type":"exact"},{"name":"cellular leiomyoma of body of uterus","type":"exact"},{"name":"uterine corpus cellular leiomyoma","type":"exact"}],"termid":"MONDO:0004162","xrefs":{"Monarch":{"xref_id":"0004162"}}}


id: PBO:0085010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of transcription elongation; contains a TFIIS-like domain that associates with chromatin and a PHD domain that interacts with H3K4me3; multicopy suppressor of temperature-sensitive ess1 mutations, binds RNA polymerase II large subunit","termid":"PBO:0085010"}


id: FYPO:0006016
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to urea. Cells stop growing (and may die) at a concentration of urea that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to urea","synonyms":[{"name":"hypersensitive to urea","type":"exact"},{"name":"sensitive to urea during mitotic cell cycle","type":"related"},{"name":"sensitive to urea during vegetative growth","type":"exact"}],"termid":"FYPO:0006016"}


id: GO:1903771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of beta-galactosidase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","GOC:BHF","PMID:11927518","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of beta-galactosidase activity","synonyms":[{"name":"activation of S 2107","type":"related"},{"name":"activation of beta-D-galactanase activity","type":"narrow"},{"name":"activation of beta-D-galactoside galactohydrolase activity","type":"narrow"},{"name":"activation of beta-D-lactosidase activity","type":"narrow"},{"name":"activation of beta-galactosidase activity","type":"narrow"},{"name":"activation of beta-lactosidase activity","type":"narrow"},{"name":"activation of exo-(1->4)-beta-D-galactanase activity","type":"narrow"},{"name":"activation of hydrolact","type":"related"},{"name":"activation of lactose hydrolysis","type":"related"},{"name":"activation of lactozym","type":"related"},{"name":"activation of maxilact","type":"related"},{"name":"activation of oryzatym","type":"related"},{"name":"activation of sumiklat","type":"related"},{"name":"activation of trilactase activity","type":"narrow"},{"name":"positive regulation of S 2107","type":"related"},{"name":"positive regulation of beta-D-galactanase activity","type":"exact"},{"name":"positive regulation of beta-D-galactoside galactohydrolase activity","type":"exact"},{"name":"positive regulation of beta-D-lactosidase activity","type":"exact"},{"name":"positive regulation of beta-lactosidase activity","type":"exact"},{"name":"positive regulation of exo-(1->4)-beta-D-galactanase activity","type":"exact"},{"name":"positive regulation of hydrolact","type":"related"},{"name":"positive regulation of lactose hydrolysis","type":"related"},{"name":"positive regulation of lactozym","type":"related"},{"name":"positive regulation of maxilact","type":"related"},{"name":"positive regulation of oryzatym","type":"related"},{"name":"positive regulation of sumiklat","type":"related"},{"name":"positive regulation of trilactase activity","type":"exact"},{"name":"up regulation of S 2107","type":"related"},{"name":"up regulation of beta-D-galactanase activity","type":"exact"},{"name":"up regulation of beta-D-galactoside galactohydrolase activity","type":"exact"},{"name":"up regulation of beta-D-lactosidase activity","type":"exact"},{"name":"up regulation of beta-galactosidase activity","type":"exact"},{"name":"up regulation of beta-lactosidase activity","type":"exact"},{"name":"up regulation of exo-(1->4)-beta-D-galactanase activity","type":"exact"},{"name":"up regulation of hydrolact","type":"related"},{"name":"up regulation of lactose hydrolysis","type":"related"},{"name":"up regulation of lactozym","type":"related"},{"name":"up regulation of maxilact","type":"related"},{"name":"up regulation of oryzatym","type":"related"},{"name":"up regulation of sumiklat","type":"related"},{"name":"up regulation of trilactase activity","type":"exact"},{"name":"up-regulation of S 2107","type":"related"},{"name":"up-regulation of beta-D-galactanase activity","type":"exact"},{"name":"up-regulation of beta-D-galactoside galactohydrolase activity","type":"exact"},{"name":"up-regulation of beta-D-lactosidase activity","type":"exact"},{"name":"up-regulation of beta-galactosidase activity","type":"exact"},{"name":"up-regulation of beta-lactosidase activity","type":"exact"},{"name":"up-regulation of exo-(1->4)-beta-D-galactanase activity","type":"exact"},{"name":"up-regulation of hydrolact","type":"related"},{"name":"up-regulation of lactose hydrolysis","type":"related"},{"name":"up-regulation of lactozym","type":"related"},{"name":"up-regulation of maxilact","type":"related"},{"name":"up-regulation of oryzatym","type":"related"},{"name":"up-regulation of sumiklat","type":"related"},{"name":"up-regulation of trilactase activity","type":"exact"},{"name":"upregulation of S 2107","type":"related"},{"name":"upregulation of beta-D-galactanase activity","type":"exact"},{"name":"upregulation of beta-D-galactoside galactohydrolase activity","type":"exact"},{"name":"upregulation of beta-D-lactosidase activity","type":"exact"},{"name":"upregulation of beta-galactosidase activity","type":"exact"},{"name":"upregulation of beta-lactosidase activity","type":"exact"},{"name":"upregulation of exo-(1->4)-beta-D-galactanase activity","type":"exact"},{"name":"upregulation of hydrolact","type":"related"},{"name":"upregulation of lactose hydrolysis","type":"related"},{"name":"upregulation of lactozym","type":"related"},{"name":"upregulation of maxilact","type":"related"},{"name":"upregulation of oryzatym","type":"related"},{"name":"upregulation of sumiklat","type":"related"},{"name":"upregulation of trilactase activity","type":"exact"}],"termid":"GO:1903771"}


id: MONDO:0005925
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bovine respiratory disease found in animals that have been shipped or exposed to cattle recently transported. The major agent responsible for the disease is mannheimia haemolytica and less commonly, pasteurella multocida or haemophilus somnus. All three agents are normal inhabitants of the bovine nasal pharyngeal mucosa but not the lung. They are considered opportunistic pathogens following stress, physiological and/or a viral infection. The resulting bacterial fibrinous bronchopneumonia is often fatal.","definition_xrefs":["MESH:D012766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumonic pasteurellosis","secondary_identifiers":["EFO:0007449","MEDGEN:11408","UMLS:C0036969"],"termid":"MONDO:0005925","xrefs":{"Monarch":{"xref_id":"0005925"}}}


id: PBO:0048193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GA binding protein transcription factor subunit beta 1","termid":"PBO:0048193"}


id: PBO:0110332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5PF pseudogene 2","termid":"PBO:0110332"}


id: PBO:0052495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLHL7 divergent transcript","termid":"PBO:0052495"}


id: PATO:0001667
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An attachment quality inhering in a bearer by virtue of the bearer's connection or association with another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment quality","termid":"PATO:0001435"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attached to","synonyms":[{"name":"affixed to","type":"related"},{"name":"attached","type":"exact"}],"termid":"PATO:0001667"}


id: PBO:0031831
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_nucleus","termid":"PBO:0031831"}


id: PBO:0070107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 21 pseudogene","termid":"PBO:0070107"}


id: GO:0048045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: all-trans-pentaprenyl diphosphate + isopentenyl diphosphate = all-trans-hexaprenyl diphosphate + diphosphate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-pentaprenyltranstransferase activity (obsolete GO:0048045)","synonyms":[{"name":"all-trans-hexaprenyl-diphosphate synthase activity","type":"related"},{"name":"all-trans-pentaprenyl-diphosphate:isopentenyl-diphosphate pentaprenyltranstransferase activity","type":"related"},{"name":"hexaprenyl diphosphate synthase activity","type":"related"},{"name":"hexaprenyl pyrophosphate synthetase activity","type":"exact"}],"termid":"GO:0048045"}


id: PR:Q9P7H7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1782.02c gene.","definition_xrefs":["UniProtKB:Q9P7H7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ilm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.02c","synonyms":[{"name":"Spom972h-SPAC1782.02c","type":"exact"}],"termid":"PR:Q9P7H7"}


id: GO:0034651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cortisol, the steroid hormone 11-beta-17,21-trihydroxypregn-4-ene-3,20-dione. Cortisol is synthesized from cholesterol in the adrenal gland and controls carbohydrate, fat and protein metabolism and has anti-inflammatory properties.","definition_xrefs":["GOC:mah","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucocorticoid biosynthetic process","termid":"GO:0006704"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"cortisol metabolic process","termid":"GO:0034650"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"cortisol biosynthetic process","synonyms":[{"name":"cortisol anabolism","type":"narrow"},{"name":"cortisol biosynthesis","type":"exact"},{"name":"cortisol formation","type":"exact"},{"name":"cortisol synthesis","type":"exact"}],"termid":"GO:0034651"}


id: GO:0042178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a xenobiotic compound, a compound foreign to the organism exposed to it, carried out by individual cells. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:jl","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xenobiotic catabolic process","secondary_identifiers":["GO:0042737","GO:0042738"],"synonyms":[{"name":"drug breakdown","type":"related"},{"name":"drug catabolic process","type":"related"},{"name":"drug catabolism","type":"related"},{"name":"drug degradation","type":"related"},{"name":"exogenous drug breakdown","type":"related"},{"name":"exogenous drug catabolic process","type":"related"},{"name":"exogenous drug catabolism","type":"related"},{"name":"exogenous drug degradation","type":"related"},{"name":"xenobiotic breakdown","type":"exact"},{"name":"xenobiotic catabolism","type":"exact"},{"name":"xenobiotic degradation","type":"exact"}],"termid":"GO:0042178"}


id: MONDO:0002144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hyperuricemia (obsolete MONDO:0002144)","secondary_identifiers":["MESH:D033461","ICD9:790.6","SCTID:35885006","DOID:1920"],"synonyms":[{"name":"blood urate raized","type":"exact"},{"name":"hyperuricemia","type":"exact"},{"name":"obsolete hyperuricemia (disease)","type":"exact"},{"name":"uricacidemia","type":"exact"}],"termid":"MONDO:0002144","xrefs":{"Monarch":{"xref_id":"0002144"}}}


id: GO:0010374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the stomatal complex over time from its formation to the mature structure. The stomatal complex is the stomatal guard cells and their associated epidermal cells.","definition_xrefs":["PMID:17259259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"},{"relation_name":"is_a","term_name":"plant epidermis development","termid":"GO:0090558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomatal complex development","termid":"GO:0010374"}


id: GO:0048887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cupula over time, from its formation to the mature structure. The cupula is secreted by mantle cells and the ciliary bundles of all of the hair cells of the neuromast are embedded in it. The cupula provides a mechanical linkage between the hair cells and the external hydrodynamic environment. The cupula of superficial neuromasts grows continuously, while the height of the cupula of canal neuromasts is limited by canal diameter.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"neuromast development","termid":"GO:0048884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cupula development","termid":"GO:0048887"}


id: PBO:0054164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1533","termid":"PBO:0054164"}


id: PBO:0052982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ladinin 1","termid":"PBO:0052982"}


id: GO:0016671
data:
  {"annotated_genes":["SJAG_04060","SJAG_00419","SJAG_00365"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036456"},{"annotations":[78799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033743"},{"annotations":[61051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008113"},{"annotations":[81705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004604"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces disulfide.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00365":null,"SJAG_00419":null,"SJAG_04060":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.8.4.-"],"synonyms":[{"name":"oxidoreductase activity, acting on sulphur group of donors, disulphide as acceptor","type":"exact"}],"termid":"GO:0016671","terms_by_termid":{"GO:0004604":null,"GO:0008113":null,"GO:0033743":null,"GO:0036456":null}}


id: MONDO:1010061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperaldosteronism that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperaldosteronism, non-human animal","secondary_identifiers":["OMIA:001269"],"termid":"MONDO:1010061","xrefs":{"Monarch":{"xref_id":"1010061"}}}


id: GO:0031487
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing one or more class XVII myosin heavy chains and associated light chains.","definition_xrefs":["PMID:24443438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0015629","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"myosin XVII complex","termid":"GO:0031487"}


id: PBO:0047571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 22","termid":"PBO:0047571"}


id: PBO:0086010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the cytosol; partially overlaps the verified gene DIA3; identified by fungal homology and RT-PCR; mRNA identified as translated by ribosome profiling data","termid":"PBO:0086010"}


id: GO:0044099
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A highly specialized structure unique to microsporidia that is required for host cell invasion. In the spore, the polar tube is connected at the anterior end, and then coils around the sporoplasm. Upon appropriate environmental stimulation, the polar tube rapidly discharges out of the spore, pierces a cell membrane and serves as a conduit for sporoplasm passage into the new host cell.","definition_xrefs":["GOC:mf","PMID:9723921","PMID:12076771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"polar tube","termid":"GO:0044099"}


id: PBO:0085036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-catalytic subunit of the NatB N-terminal acetyltransferase; NatB catalyzes N-acetylation of proteins with specific N-terminal sequences; involved in mitochondrial inheritance and actin assembly","termid":"PBO:0085036"}


id: PBO:0075134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein U1 subunit 70","termid":"PBO:0075134"}


id: MONDO:0015154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rickettsial disease (obsolete MONDO:0015154)","termid":"MONDO:0015154","xrefs":{"Monarch":{"xref_id":"0015154"}}}


id: PATO:0002210
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex 3-D shape quality inhering in a bearer by virtue of the bearer's resembling a teardrop.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spheroid","termid":"PATO:0001865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bulbous","synonyms":[{"name":" bulblike","type":"exact"},{"name":"bulb-shaped","type":"exact"},{"name":"swollen","type":"related"}],"termid":"PATO:0002210"}


id: MONDO:0024665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of sexual differentiation","termid":"MONDO:0002145"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indeterminate sex and/or pseudohermaphroditism","secondary_identifiers":["MEDGEN:712820","ICD10CM:Q56","SCTID:268229003","UMLS:C1290455","ICD9:752.7"],"synonyms":[{"name":"gynandrism","type":"related"}],"termid":"MONDO:0024665","xrefs":{"Monarch":{"xref_id":"0024665"}}}


id: GO:0042762
data:
  {"annotated_genes":["SJAG_02380","SJAG_02406","SJAG_01187","SJAG_03538","SJAG_01402"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117484,113358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[115677,90906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"},{"annotations":[76921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010510"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving sulfur, the nonmetallic element sulfur or compounds that contain sulfur.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_01402":null,"SJAG_02380":null,"SJAG_02406":null,"SJAG_03538":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"regulation of sulfur metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of sulfur metabolism","type":"exact"},{"name":"regulation of sulphur metabolic process","type":"exact"},{"name":"regulation of sulphur metabolism","type":"exact"}],"termid":"GO:0042762","terms_by_termid":{"GO:0010510":null,"GO:0090180":null,"GO:2001211":null}}


id: GO:0009802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ester derivatives of cinnamic acid, phenylpropenoic acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"cinnamic acid ester metabolic process","termid":"GO:0009801"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"part_of","term_name":"cinnamic acid metabolic process","termid":"GO:0009803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0019748"},{"rel_name":"part_of","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"cinnamic acid ester biosynthetic process","synonyms":[{"name":"cinnamic acid ester anabolism","type":"exact"},{"name":"cinnamic acid ester biosynthesis","type":"exact"},{"name":"cinnamic acid ester formation","type":"exact"},{"name":"cinnamic acid ester synthesis","type":"exact"},{"name":"cinnamylic acid ester biosynthesis","type":"exact"},{"name":"cinnamylic acid ester biosynthetic process","type":"exact"},{"name":"phenylacrylic acid ester biosynthesis","type":"exact"},{"name":"phenylacrylic acid ester biosynthetic process","type":"exact"}],"termid":"GO:0009802"}


id: PBO:0039885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP42 pseudogene 2","termid":"PBO:0039885"}


id: PBO:0063377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDGFA associated protein 1","termid":"PBO:0063377"}


id: PBO:0079738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein 4","termid":"PBO:0079738"}


id: MONDO:0010440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, X-linked 4","secondary_identifiers":["MEDGEN:162886","OMIM:300830","UMLS:C0795888"],"synonyms":[{"name":"AUTSX4","type":"related"},{"name":"X-linked susceptibility to autism-4","type":"related"},{"name":"autism, susceptibility to, X-linked 4","type":"exact"},{"name":"autism, susceptibility to, X-linked 4, X-linked recessive","type":"exact"},{"name":"autism, susceptibility to, X-linked type 4","type":"exact"},{"name":"chromosome Xp22 deletion syndrome","type":"related"},{"name":"susceptibility to X-linked autism 4","type":"related"},{"name":"susceptibility to autism, X-linked","type":"related"}],"termid":"MONDO:0010440","xrefs":{"Monarch":{"xref_id":"0010440"}}}


id: MONDO:1012058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"degenerative myopathy of obturator-externus, non-human animal","termid":"MONDO:1011788"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerative myopathy of obturator-externus, dog","secondary_identifiers":["OMIA:000265-9615"],"termid":"MONDO:1012058","xrefs":{"Monarch":{"xref_id":"1012058"}}}


id: FYPO:0000048
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which invasive growth does not occur.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete invasive growth abolished (obsolete FYPO:0000048)","synonyms":[{"name":"absent invasive growth","type":"exact"},{"name":"invasive growth abolished during vegetative growth","type":"exact"},{"name":"invasive growth: absent","type":"related"}],"termid":"FYPO:0000048"}


id: MONDO:0002994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually malignant neuroendocrine tumor arising from the delta cells of the pancreas. It may be associated with inappropriate secretion of somatostatin and an associated clinical syndrome, or it may be hormonally inactive (non-functioning).","definition_xrefs":["NCIT:C28396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"},{"relation_name":"is_a","term_name":"pancreatic neuroendocrine tumor","termid":"MONDO:0019954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic delta cell neuroendocrine tumor","secondary_identifiers":["MEDGEN:233303","UMLS:C1335301","DOID:4433"],"synonyms":[{"name":"pancreatic Delta cell NET","type":"exact"},{"name":"pancreatic Delta cell neoplasm","type":"exact"},{"name":"pancreatic Delta cell neuroendocrine tumor","type":"exact"},{"name":"pancreatic Delta cell neuroendocrine tumour","type":"exact"},{"name":"pancreatic Delta cell tumor","type":"exact"},{"name":"pancreatic Delta cell tumour","type":"exact"},{"name":"pancreatic delta cell neoplasm","type":"exact"}],"termid":"MONDO:0002994","xrefs":{"Monarch":{"xref_id":"0002994"}}}


id: SO:0001879
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant, caused by an alteration of the genomic sequence, where the deletion, is greater than the extent of the underlying genomic features.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural_variant","termid":"SO:0001537"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_ablation","synonyms":[{"name":"feature ablation","type":"exact"}],"termid":"SO:0001879"}


id: PBO:0042493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH13 antisense RNA 1","termid":"PBO:0042493"}


id: PBO:0059173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I-related","termid":"PBO:0059173"}


id: GO:0032410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of a transporter.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transporter activity","termid":"GO:0032409"},{"relation_name":"is_a","term_name":"negative regulation of molecular function","termid":"GO:0044092"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of transporter activity","synonyms":[{"name":"down regulation of transporter activity","type":"exact"},{"name":"down-regulation of transporter activity","type":"exact"},{"name":"downregulation of transporter activity","type":"exact"},{"name":"inhibition of transporter activity","type":"narrow"}],"termid":"GO:0032410"}


id: GO:0050359
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + tropomyosin = ADP + O-phosphotropomyosin.","definition_xrefs":["MetaCyc:TROPOMYOSIN-KINASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete tropomyosin kinase activity (obsolete GO:0050359)","synonyms":[{"name":"ATP:tropomyosin O-phosphotransferase activity","type":"related"},{"name":"STK","type":"related"},{"name":"tropomyosin kinase (phosphorylating) activity","type":"related"}],"termid":"GO:0050359"}


id: GO:0061989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chromosome organization process in which meiotic chromosomes in the spem nucleus cluster together to form a compact spherical structure called the karyosome.","definition_xrefs":["PMID:19696886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"karyosome formation","termid":"GO:0061988"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"sperm karyosome formation","termid":"GO:0061989"}


id: MONDO:0020682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, spondylodysplastic type","termid":"MONDO:0007526"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005497"],"is_obsolete":false,"name":"Ehlers-Danlos syndrome, spondylodysplastic type, 1","secondary_identifiers":["OMIM:130070","DOID:0080738","UMLS:C4552003","MEDGEN:1646889"],"synonyms":[{"name":"EDSSPD1","type":"exact"},{"name":"Ehlers-Danlos syndrome with Short stature and Limb anomalies","type":"exact"},{"name":"Ehlers-Danlos syndrome, progeroid type 1","type":"exact"},{"name":"Ehlers-Danlos syndrome, progeroid type, 1","type":"exact"},{"name":"Ehlers-Danlos syndrome, progeroid type, 1, formerly","type":"related"},{"name":"Ehlers-Danlos syndrome, spondylodysplastic type, 1","type":"exact"},{"name":"PDS, defective biosynthesis of","type":"exact"},{"name":"XGPT deficiency","type":"exact"},{"name":"dermatan sulfate proteoglycan","type":"exact"},{"name":"dermatan sulphate proteoglycan","type":"exact"},{"name":"galactosyltransferase 1 deficiency","type":"exact"},{"name":"proteodermatan sulfate, defective biosynthesis of","type":"exact"},{"name":"xylosylprotein 4-Beta-galactosyltransferase deficiency","type":"exact"}],"termid":"MONDO:0020682","xrefs":{"Monarch":{"xref_id":"0020682"}}}


id: MONDO:0032848
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 65, susceptibility to viral infections","secondary_identifiers":["UMLS:C5231441","MEDGEN:1684865","DOID:0111978","OMIM:618648"],"synonyms":[{"name":"IMD65","type":"related"},{"name":"IMMUNODEFICIENCY 65, SUSCEPTIBILITY TO VIRAL INFECTIONS","type":"related"}],"termid":"MONDO:0032848","xrefs":{"Monarch":{"xref_id":"0032848"}}}


id: GO:1904105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of convergent extension involved in gastrulation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24892953","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of convergent extension involved in gastrulation","termid":"GO:1904103"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"positively_regulates","term_name":"convergent extension involved in gastrulation","termid":"GO:0060027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of convergent extension involved in gastrulation","synonyms":[{"name":"activation of convergent extension involved in gastrulation","type":"narrow"},{"name":"up regulation of convergent extension involved in gastrulation","type":"exact"},{"name":"up-regulation of convergent extension involved in gastrulation","type":"exact"},{"name":"upregulation of convergent extension involved in gastrulation","type":"exact"}],"termid":"GO:1904105"}


id: GO:0045103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cellular process that depends upon or alters the intermediate filament cytoskeleton, that part of the cytoskeleton comprising intermediate filaments and their associated proteins.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate filament-based process","termid":"GO:0045103"}


id: GO:0006622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of directing proteins towards the lysosome using signals contained within the protein.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting to vacuole","termid":"GO:0006623"},{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"protein localization to lysosome","termid":"GO:0061462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0006605","GO:0008150"],"is_obsolete":false,"name":"protein targeting to lysosome","synonyms":[{"name":"protein-lysosome targeting","type":"exact"}],"termid":"GO:0006622"}


id: GO:0033805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: S-adenosyl-L-methionine + sarcosine = S-adenosyl-L-homocysteine + N,N-dimethylglycine, and S-adenosyl-L-methionine + N,N-dimethylglycine = S-adenosyl-L-homocysteine + betaine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete sarcosine/dimethylglycine N-methyltransferase activity (obsolete GO:0033805)","synonyms":[{"name":"ApDMT","type":"related"},{"name":"S-adenosyl-L-methionine:N,N-dimethylglycine N-methyltransferase activity","type":"narrow"},{"name":"SDMT","type":"related"},{"name":"sarcosine dimethylglycine N-methyltransferase activity","type":"narrow"},{"name":"sarcosine dimethylglycine methyltransferase activity","type":"narrow"},{"name":"sarcosine/dimethylglycine N-methyltransferase activity","type":"exact"}],"termid":"GO:0033805"}


id: FYPO:0004315
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, or morphology of all or part of the microtubule cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton","termid":"FYPO:0002399"},{"relation_name":"output_of","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002399","FYPO:0005447","FYPO:0001320","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton during vegetative growth","synonyms":[{"name":"abnormal microtubule cytoskeleton during mitotic cell cycle","type":"related"},{"name":"abnormal microtubule cytoskeleton physical object quality during vegetative growth","type":"exact"},{"name":"disorganized microtubule cytoskeleton during vegetative growth","type":"related"}],"termid":"FYPO:0004315"}


id: PBO:0072496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 25","termid":"PBO:0072496"}


id: GO:0031724
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CXCR5 chemokine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CXCR chemokine receptor binding","termid":"GO:0045236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"CXCR5 chemokine receptor binding","synonyms":[{"name":"CXCR5 chemokine receptor ligand","type":"narrow"},{"name":"type 1 Burkitt's lymphoma receptor binding","type":"exact"}],"termid":"GO:0031724"}


id: FYPO:0004750
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated and has one or more septa.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"has_part","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"septated vegetative cell","termid":"FYPO:0002342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"elongated septated vegetative cell","synonyms":[{"name":"elongated septated cell during mitotic cell cycle","type":"related"},{"name":"elongated septated cells during vegetative growth","type":"exact"},{"name":"long septated cells","type":"exact"}],"termid":"FYPO:0004750"}


id: MONDO:0015766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cholera is an infectious disease, caused by intestinal infection with Vibrio cholerae, characterized by massive watery diarrhea and severe dehydration that can lead to shock and death if left untreated.","definition_xrefs":["Orphanet:173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"intestinal infectious disease","termid":"MONDO:0000916"},{"relation_name":"is_a","term_name":"vibrio infectious disease","termid":"MONDO:0007014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"cholera","secondary_identifiers":["MESH:D002771","icd11.foundation:257068234","ICD9:001.9","MedDRA:10008631","NCIT:C157812","UMLS:C0008354","GARD:6043","ICD10CM:A00","ICD9:001","DOID:1498","MEDGEN:40263","NORD:928","SCTID:63650001","ICD9:001.0"],"synonyms":[{"name":"Vibrio cholerae","type":"exact"},{"name":"Vibrio cholerae caused disease or disorder","type":"exact"},{"name":"Vibrio cholerae disease or disorder","type":"exact"},{"name":"Vibrio cholerae infection","type":"related"},{"name":"Vibrio cholerae infectious disease","type":"exact"},{"name":"cholera - Vibrio cholerae","type":"exact"},{"name":"cholera due to Vibrio cholerae","type":"exact"}],"termid":"MONDO:0015766","xrefs":{"Monarch":{"xref_id":"0015766"}}}


id: PBO:0001446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin specific chaperone cofactor B","termid":"PBO:0001446"}


id: PBO:0034196
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_ends_with","termid":"PBO:0034196"}


id: PBO:0049990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine triad nucleotide binding protein 2 pseudogene 1","termid":"PBO:0049990"}


id: PATO:0000559
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000559 absolute size value (obsolete PATO:0000559)","termid":"PATO:0000559"}


id: GO:0005985
data:
  {"annotated_genes":["SJAG_04301"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005987"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving sucrose, the disaccharide fructofuranosyl-glucopyranoside.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide metabolic process","termid":"GO:0005984"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"sucrose metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"sucrose metabolism","type":"exact"}],"termid":"GO:0005985","terms_by_termid":{"GO:0005987":null}}


id: MONDO:0030258
data:
  {"annotated_genes":["SJAG_03601"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88340],"is_not":false,"summary":null,"term":"MONDO:0030258"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03601":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia, type 14","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:613274","GARD:18032","DOID:0112325","MEDGEN:1778516","OMIM:619301","UMLS:C5543322"],"synonyms":[{"name":"PCH14","type":"exact"},{"name":"pontocerebellar hypoplasia, type 14","type":"exact"}],"termid":"MONDO:0030258","terms_by_termid":{"MONDO:0030258":null},"xrefs":{"Monarch":{"xref_id":"0030258"}}}


id: PBO:0031026
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_concentration_of_M-factor_in_growth_medium","termid":"PBO:0031026"}


id: MONDO:0014917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the CACNA1A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undetermined early-onset epileptic encephalopathy","termid":"MONDO:0018614"},{"relation_name":"is_a","term_name":"CACNA1A-related complex neurodevelopmental disorder","termid":"MONDO:0100254"},{"relation_name":"is_a","term_name":"neonatal-onset developmental and epileptic encephalopathy","termid":"MONDO:0100455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005027","MONDO:0005066","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 42","secondary_identifiers":["MEDGEN:934683","OMIM:617106","UMLS:C4310716","DOID:0080454","GARD:16191"],"synonyms":[{"name":"CACNA1A early infantile epileptic encephalopathy","type":"exact"},{"name":"DEE42","type":"exact"},{"name":"EIEE42","type":"exact"},{"name":"developmental and epileptic encephalopathy 42","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in CACNA1A","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 42","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 42; EIEE42","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 42","type":"exact"}],"termid":"MONDO:0014917","xrefs":{"Monarch":{"xref_id":"0014917"}}}


id: MONDO:0017827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant peripheral nerve sheath tumor (MPNST) is a rare and often aggressive soft tissue sarcoma occurring in a wide range of anatomical sites.","definition_xrefs":["Orphanet:3148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system sarcoma","termid":"MONDO:0002217"},{"relation_name":"is_a","term_name":"nerve sheath neoplasm","termid":"MONDO:0002547"},{"relation_name":"is_a","term_name":"tumor of cranial and spinal nerves","termid":"MONDO:0016749"},{"relation_name":"is_a","term_name":"peripheral nervous system cancer","termid":"MONDO:0021089"},{"relation_name":"is_a","term_name":"malignant glioma","termid":"MONDO:0100342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant peripheral nerve sheath tumor","secondary_identifiers":["DOID:5940","NCIT:C3798","ICDO:9540/3","SCTID:404037002","UMLS:C0751690","EFO:0000760","GARD:10872","icd11.foundation:71413945","ICD9:171.9","ICDO:9560/3","MedDRA:10029236","MEDGEN:155614","NANDO:2200102","ONCOTREE:MPNST"],"synonyms":[{"name":"MPNST","type":"exact"},{"name":"Malig. periph. nerve sheath tum.","type":"exact"},{"name":"malignant neoplasm of peripheral nerve sheath","type":"exact"},{"name":"malignant neoplasm of the peripheral nerve sheath","type":"exact"},{"name":"malignant neurilemmoma","type":"exact"},{"name":"malignant neurilemoma","type":"exact"},{"name":"malignant neurofibroma","type":"exact"},{"name":"malignant peripheral nerve sheath neoplasm","type":"exact"},{"name":"malignant peripheral nerve sheath tumor","type":"exact"},{"name":"malignant peripheral nerve sheath tumor (morphologic abnormality)","type":"exact"},{"name":"malignant peripheral nerve sheath tumor [dup] (morphologic abnormality)","type":"exact"},{"name":"malignant peripheral nerve sheath tumour (morphologic abnormality)","type":"exact"},{"name":"malignant peripheral nerve sheath tumour [dup] (morphologic abnormality)","type":"exact"},{"name":"malignant schwannoma","type":"exact"},{"name":"malignant tumor of peripheral nerve sheath","type":"exact"},{"name":"malignant tumor of the peripheral nerve sheath","type":"exact"},{"name":"malignant tumour of peripheral nerve sheath","type":"exact"},{"name":"malignant tumour of the peripheral nerve sheath","type":"exact"},{"name":"neurofibrosarcoma","type":"broad"},{"name":"neurofibrosarcoma, malignant","type":"exact"},{"name":"neurogenic sarcoma","type":"exact"},{"name":"schwannoma, malignant","type":"exact"}],"termid":"MONDO:0017827","xrefs":{"Monarch":{"xref_id":"0017827"}}}


id: GO:0015067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reversible transfer of an amidino group to an acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring one-carbon groups","termid":"GO:0016741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"amidinotransferase activity","secondary_identifiers":["EC:2.1.4.-"],"synonyms":[{"name":"transamidinase activity","type":"exact"}],"termid":"GO:0015067"}


id: PBO:0087526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase; complex catalyzes the oxidation of isocitrate to alpha-ketoglutarate in the TCA cycle; phosphorylated","termid":"PBO:0087526"}


id: PATO:0001581
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A contractility which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"contractile","termid":"PATO:0001690"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased contractility","synonyms":[{"name":"low contractility","type":"exact"}],"termid":"PATO:0001581"}


id: PBO:0029878
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_telomere","termid":"PBO:0029878"}


id: PBO:0064866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 26","termid":"PBO:0064866"}


id: MONDO:0022926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete daentl towsend Siegel syndrome (obsolete MONDO:0022926)","termid":"MONDO:0022926","xrefs":{"Monarch":{"xref_id":"0022926"}}}


id: MONDO:0003241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the brain and spinal cord.","definition_xrefs":["NCIT:C7004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"},{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system hemangioma","secondary_identifiers":["MEDGEN:272703","DOID:501","UMLS:C1333957"],"synonyms":[{"name":"central nervous system hemangioma","type":"exact"},{"name":"hemangioma of CNS","type":"exact"},{"name":"hemangioma of central nervous system","type":"exact"},{"name":"hemangioma of the CNS","type":"exact"},{"name":"hemangioma of the central nervous system","type":"exact"}],"termid":"MONDO:0003241","xrefs":{"Monarch":{"xref_id":"0003241"}}}


id: PBO:0047122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM167A antisense RNA 1","termid":"PBO:0047122"}


id: SO:1000015
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transition of an adenine to a guanine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine_transition","termid":"SO:1000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A_to_G_transition","synonyms":[{"name":"A to G transition","type":"exact"}],"termid":"SO:1000015"}


id: MONDO:1012558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anal gland disease, non-human animal","termid":"MONDO:1011682"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anal gland disease, dog","secondary_identifiers":["OMIA:002523-9615"],"termid":"MONDO:1012558","xrefs":{"Monarch":{"xref_id":"1012558"}}}


id: GO:0061962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency or rate of heme oxygenase activity.","definition_xrefs":["GOC:rph","PMID:24844779","GOC:BHF_miRNA","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of heme oxygenase activity (obsolete GO:0061962)","termid":"GO:0061962"}


id: PBO:0033816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic APC inhibitor Mes1","termid":"PBO:0033816"}


id: FYPO:0003117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of reactive oxygen species (ROS) measured in a cell is higher than normal during a cellular response to plumbagin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular reactive oxygen species level during vegetative growth","termid":"FYPO:0003004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular reactive oxygen species level during cellular response to plumbagin","synonyms":[{"name":"increased ROS accumulation during cellular response to plumbagin","type":"related"},{"name":"increased cellular ROS accumulation during cellular response to plumbagin","type":"related"},{"name":"increased cellular ROS level during cellular response to plumbagin","type":"exact"},{"name":"increased cellular reactive oxygen species accumulation during cellular response to plumbagin","type":"related"},{"name":"increased cellular reactive oxygen species level during cellular response to plumbagin during mitotic cell cycle","type":"related"},{"name":"increased cellular reactive oxygen species level during cellular response to plumbagin during vegetative growth","type":"exact"}],"termid":"FYPO:0003117"}


id: MONDO:0002950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of basal cell carcinoma characterized by the presence of clear cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"skin clear cell basal cell carcinoma","secondary_identifiers":["NCIT:C27536","UMLS:C1516599","MEDGEN:275752","DOID:4293"],"synonyms":[{"name":"clear cell basal cell carcinoma","type":"exact"},{"name":"skin clear cell basal cell carcinoma","type":"exact"}],"termid":"MONDO:0002950","xrefs":{"Monarch":{"xref_id":"0002950"}}}


id: MONDO:0019125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, clinically heterogeneous, multisystemic inflammatory disease characterized by inflammation of the cartilage and proteoglycan rich structures leading to cartilage damage with joint, ocular and cardiovascular involvement.","definition_xrefs":["Orphanet:728"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"chondromalacia","termid":"MONDO:0002342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relapsing polychondritis","secondary_identifiers":["NANDO:2200428","EFO:1001148","NANDO:1200283","NANDO:2100154","NORD:1655","UMLS:C0032453","ICD10CM:M94.1","DOID:2556","MESH:D011081","SCTID:72275000","NCIT:C157268","icd11.foundation:1412888287","ICD9:733.99","MedDRA:10038304","MEDGEN:45995","GARD:7417"],"synonyms":[{"name":"chondromalacia, systemic","type":"exact"},{"name":"chronic atrophic polychondritis","type":"related"},{"name":"recurrent polychondritis","type":"related"}],"termid":"MONDO:0019125","xrefs":{"Monarch":{"xref_id":"0019125"}}}


id: PATO:0002133
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A displaced angular placement quality inhering in a body part by virtue of the bearer's movement closer the medial plane of the body.","definition_xrefs":["wikipedia:wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"displaced to","termid":"PATO:0002168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adduction","termid":"PATO:0002133"}


id: PBO:0081241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF8-ERVK3-1 readthrough (NMD candidate)","termid":"PBO:0081241"}


id: PR:O74429
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.06c","secondary_identifiers":["UniProtKB:O74429"],"synonyms":[{"name":"InsP6 and PP-IP5 kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC1672.06c","type":"related"},{"name":"Spom972h-PPIP5K2","type":"exact"},{"name":"cortical actin cytoskeleton protein asp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vip1","type":"related"}],"termid":"PR:O74429"}


id: PBO:0004705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosomal 3'-5' exoribonuclease, PH-like (predicted)","termid":"PBO:0004705"}


id: GO:0022850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a cation by a channel that opens when serotonin has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport","PMID:12867984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmitter-gated monoatomic ion channel activity","termid":"GO:0022824"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"},{"relation_name":"is_a","term_name":"serotonin receptor activity","termid":"GO:0099589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857","GO:0038023"],"is_obsolete":false,"name":"serotonin-gated monoatomic cation channel activity","secondary_identifiers":["GO:0005232","Reactome:R-HSA-9648983","Reactome:R-HSA-975311"],"synonyms":[{"name":"5-hydroxytryptamine-gated receptor-channel","type":"narrow"},{"name":"serotonin-activated cation-selective channel activity","type":"exact"},{"name":"serotonin-gated cation channel activity","type":"narrow"},{"name":"serotonin-gated cation-selective channel activity","type":"broad"},{"name":"serotonin-gated monoatomic cation-selective channel activity","type":"exact"}],"termid":"GO:0022850"}


id: GO:0044308
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spine that originates from the axon, usually from the initial segment.","definition_xrefs":["NIF_Subcellular:sao18239917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron spine","termid":"GO:0044309"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"axonal spine","synonyms":[{"name":"axon spine","type":"exact"}],"termid":"GO:0044308"}


id: GO:0016556
data:
  {"annotated_genes":["SJAG_00319","SJAG_04065","SJAG_04754","SJAG_00088","SJAG_02978"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82078,72432,77416,74712,80265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990481"}]},"cv_name":"biological_process","definition":"The covalent alteration of one or more nucleotides within an mRNA molecule to produce an mRNA molecule with a sequence that differs from that coded genetically.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"},{"relation_name":"is_a","term_name":"mRNA metabolic process","termid":"GO:0016071"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00319":null,"SJAG_02978":null,"SJAG_04065":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"mRNA modification","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0006381","Reactome:R-HSA-75072"],"synonyms":[{"name":"mRNA editing","type":"narrow"}],"termid":"GO:0016556","terms_by_termid":{"GO:1990481":null}}


id: GO:0030287
data:
  {"annotated_genes":["SJAG_01970","SJAG_04067"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115323,115324],"is_not":false,"summary":null,"term":"GO:0030287"}]},"cv_name":"cellular_component","definition":"The region between the plasma membrane and the cell wall in organisms lacking an outer cell membrane such as yeast and Gram positive bacteria. The region is thinner than the equivalent in Gram negative bacteria.","definition_xrefs":["GOC:mlg","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periplasmic space","termid":"GO:0042597"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell wall-bounded periplasmic space","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"IWZ","type":"narrow"},{"name":"cell wall bounded periplasmic space","type":"exact"},{"name":"cell wall-enclosed periplasmic space","type":"exact"},{"name":"inner wall zone","type":"narrow"}],"termid":"GO:0030287","terms_by_termid":{"GO:0030287":null}}


id: GO:0015597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + polar amino acid(out) = ADP + phosphate + polar amino acid(in).","definition_xrefs":["EC:3.6.3.21","TC:3.A.1.3.1"],"gene_count":0,"genotype_count":0,"name":"obsolete histidine/arginine/lysine/ornithine porter activity (obsolete GO:0015597)","synonyms":[{"name":"histidine/arginine/lysine/ornithine porter activity","type":"exact"}],"termid":"GO:0015597"}


id: SO:0001442
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-polar, hydorophobic amino acid encoded by the codon ATG.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine","synonyms":[{"name":"M","type":"exact"},{"name":"Met","type":"exact"}],"termid":"SO:0001442"}


id: FYPO:0000956
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing bismuth ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002060","FYPO:0000139","FYPO:0000003","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on bismuth","synonyms":[{"name":"normal cell population growth in presence of bismuth","type":"exact"},{"name":"normal cell population growth on bismuth","type":"exact"},{"name":"normal cellular response to bismuth","type":"related"},{"name":"normal growth on bismuth ions","type":"exact"},{"name":"normal vegetative cell population growth on bismuth","type":"exact"}],"termid":"FYPO:0000956"}


id: PBO:0010008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation RNA helicase Sum3","termid":"PBO:0010008"}


id: SO:0001953
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of DNA sequence formed from the ligation of two sticky ends where the palindrome is broken and no longer comprises the recognition site and thus cannot be re-cut by the restriction enzymes used to create the sticky ends.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction_enzyme_region","termid":"SO:0001954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restriction_enzyme_assembly_scar","termid":"SO:0001953"}


id: PBO:0046514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate rich 6B","termid":"PBO:0046514"}


id: GO:0008253
data:
  {"annotated_genes":["SJAG_01055","SJAG_03276","SJAG_03096","SJAG_02582","SJAG_02593","SJAG_02580","SJAG_02959"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71665,92186,92420,96244,115704,115705,119192],"is_not":false,"summary":null,"term":"GO:0008253"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5'-ribonucleotide + H2O = a ribonucleoside + phosphate.","definition_xrefs":["EC:3.1.3.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidase activity","termid":"GO:0008252"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01055":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02593":null,"SJAG_02959":null,"SJAG_03096":null,"SJAG_03276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"5'-nucleotidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9755078","Reactome:R-HSA-8940074","Reactome:R-HSA-109278","Reactome:R-HSA-109415","Reactome:R-HSA-109387","Reactome:R-HSA-5694126","Reactome:R-HSA-109470","Reactome:R-HSA-109291","MetaCyc:5-NUCLEOTID-RXN","Reactome:R-HSA-109514","Reactome:R-HSA-109480","Reactome:R-HSA-8940070","RHEA:12484","Reactome:R-HSA-109449","Reactome:R-HSA-109380","Reactome:R-HSA-74248"],"synonyms":[{"name":"5' nucleotidase activity","type":"exact"},{"name":"5'-AMP nucleotidase","type":"narrow"},{"name":"5'-AMPase","type":"narrow"},{"name":"5'-adenylic phosphatase","type":"narrow"},{"name":"5'-mononucleotidase activity","type":"related"},{"name":"5'-ribonucleotide phosphohydrolase activity","type":"related"},{"name":"AMP phosphatase","type":"narrow"},{"name":"AMP phosphohydrolase","type":"narrow"},{"name":"AMPase","type":"narrow"},{"name":"UMPase","type":"narrow"},{"name":"adenosine 5'-phosphatase","type":"narrow"},{"name":"adenosine monophosphatase","type":"narrow"},{"name":"snake venom 5'-nucleotidase","type":"narrow"},{"name":"thimidine monophosphate nucleotidase","type":"narrow"},{"name":"uridine 5'-nucleotidase","type":"narrow"}],"termid":"GO:0008253","terms_by_termid":{"GO:0008253":null}}


id: GO:0141007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transposable element silencing mechanism in which a siRNA triggers heterochromatin assembly. Heterochromatin is a chromatin conformation that is refractory to transcription.","definition_xrefs":["PMID:36570931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transposable element silencing by heterochromatin formation","termid":"GO:0141005"},{"relation_name":"is_a","term_name":"siRNA-mediated heterochromatin formation","termid":"GO:0141194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006325"],"is_obsolete":false,"name":"transposable element silencing by siRNA-mediated heterochromatin formation","synonyms":[{"name":"siRNA-mediated retrotransposon silencing by heterochromatin formation","type":"narrow"}],"termid":"GO:0141007"}


id: PBO:0052595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 3","termid":"PBO:0052595"}


id: PBO:0075383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 30","termid":"PBO:0075383"}


id: MONDO:0005676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An encephalomyelitis of horses, sheep and cattle caused by borna disease virus.","definition_xrefs":["MESH:D001890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"},{"relation_name":"is_a","term_name":"acute disease, non-human animal","termid":"MONDO:1011300"},{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"borna disease","secondary_identifiers":["EFO:0007178"],"synonyms":[{"name":"enzootic encephalomyelitis","type":"related"}],"termid":"MONDO:0005676","xrefs":{"Monarch":{"xref_id":"0005676"}}}


id: PBO:0043122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circadian associated repressor of transcription","termid":"PBO:0043122"}


id: PBO:0083142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps 3' end of verified gene NUP53/YMR153W","termid":"PBO:0083142"}


id: PBO:0086319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to GPI-anchored aspartic proteases; such proteases are Yap1p and Yap3p; mCherry fusion protein localizes to the vacuole","termid":"PBO:0086319"}


id: GO:0120185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an MBF transcription complex.","definition_xrefs":["PMID:9303312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"MBF transcription complex assembly","synonyms":[{"name":"DSC1 transcription factor complex assembly","type":"exact"},{"name":"MBF complex assembly","type":"exact"},{"name":"Mlu1-box binding factor assembly","type":"exact"}],"termid":"GO:0120185"}


id: GO:0021939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates the transfer of information from the extracellular matrix to granule cell precursors resulting in a decrease in rate of granule cell precursor cell proliferation.","definition_xrefs":["GOC:dph","GOC:jid","PMID:15157725","GOC:cls","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix-cell signaling","termid":"GO:0035426"},{"relation_name":"part_of","term_name":"negative regulation of cerebellar granule cell precursor proliferation","termid":"GO:0021941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"extracellular matrix-granule cell signaling involved in regulation of granule cell precursor proliferation","synonyms":[{"name":"extracellular matrix-granule cell signalling involved in regulation of granule cell precursor proliferation","type":"exact"}],"termid":"GO:0021939"}


id: PBO:0072844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAPCD1 antisense RNA 1","termid":"PBO:0072844"}


id: PBO:0030924
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_long-chain_fatty_acid-CoA_ligase_activity","termid":"PBO:0030924"}


id: FYPO:0004026
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the increase in gross chromosomal rearrangements that normally results from synthesis template switching during processing of arrested replication forks is diminished or abolished.","definition_xrefs":["PomBase:mah","PMID:25313826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of gross chromosomal rearrangement during replication fork processing","termid":"FYPO:0003587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000293"],"is_obsolete":false,"name":"loss of template switch-mediated chromosomal rearrangement during replication fork processing","termid":"FYPO:0004026"}


id: MONDO:0004979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bronchial disease that is characterized by chronic inflammation and narrowing of the airways, which is caused by a combination of environmental and genetic factors resulting in recurring periods of wheezing (a whistling sound while breathing), chest tightness, shortness of breath, mucus production and coughing. The symptoms appear due to a variety of triggers such as allergens, irritants, respiratory infections, weather changes, exercise, stress, reflux disease, medications, foods and emotional anxiety.","definition_xrefs":["EFO:0000270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchial disorder","termid":"MONDO:0001358"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma","secondary_identifiers":["HP:0002099","ICD10CM:J45","MEDGEN:2109","DOID:2841","UMLS:C0004096","ICD9:493.81","ICD9:493","NCIT:C28397","SCTID:31387002","MESH:D001249","ICD9:493.9","icd11.foundation:1656445230"],"synonyms":[{"name":"bronchial hyperreactivity","type":"exact"},{"name":"chronic obstructive asthma","type":"narrow"},{"name":"chronic obstructive asthma with acute exacerbation","type":"narrow"},{"name":"chronic obstructive asthma with status asthmaticus","type":"narrow"},{"name":"exercise induced asthma","type":"narrow"},{"name":"exercise-induced asthma","type":"narrow"}],"termid":"MONDO:0004979","xrefs":{"Monarch":{"xref_id":"0004979"}}}


id: SO:0001156
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters, usually located between -10 and -60 relative to the TSS. Consensus sequence is WATCGATW.","definition_xrefs":["PMID:12537576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DRE_motif","synonyms":[{"name":"DRE motif","type":"exact"},{"name":"NDM4","type":"exact"},{"name":"WATCGATW_motif","type":"exact"}],"termid":"SO:0001156"}


id: SO:0002149
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 15th residue (a lysine), from the start of the H2AZ histone protein is acetylated.","definition_xrefs":["PMID:24316985","PMID:19385636","PMID:27087541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2AZ_acetylation_site","termid":"SO:0002144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2AZK15_acetylation_site","synonyms":[{"name":"H2A.ZK15ac","type":"exact"},{"name":"H2AZK15 acetylation site","type":"exact"},{"name":"H2AZK15ac","type":"exact"}],"termid":"SO:0002149"}


id: MONDO:0019113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign paroxysmal torticollis of infancy (BPTI) is a rare functional disorder characterized by recurrent episodes of torticollic posturing of the head (inclination or tilting of the head to one side) in healthy children.","definition_xrefs":["Orphanet:71518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal dystonia","termid":"MONDO:0016058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"benign paroxysmal torticollis of infancy","secondary_identifiers":["SCTID:719521002","GARD:18913","MEDGEN:782128","UMLS:C3494934","icd11.foundation:545726308"],"termid":"MONDO:0019113","xrefs":{"Monarch":{"xref_id":"0019113"}}}


id: MONDO:0024323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of the glomus tumor with architectural features similar to solid glomus tumor. It is characterized by the presence of elongated glomus cells which resemble mature smooth muscle.","definition_xrefs":["NCIT:C4223"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign perivascular tumor","termid":"MONDO:0003342"},{"relation_name":"is_a","term_name":"glomus tumor","termid":"MONDO:0018327"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glomangiomyoma","secondary_identifiers":["MEDGEN:87240","DOID:8020","UMLS:C0334422","ICDO:8713/0"],"synonyms":[{"name":"glomangiomyoma","type":"exact"}],"termid":"MONDO:0024323","xrefs":{"Monarch":{"xref_id":"0024323"}}}


id: GO:0043559
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to insulin, a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"},{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"insulin binding","termid":"GO:0043559"}


id: GO:0047164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: biochanin-A + malonyl-CoA = 6'-malonyl-biochanin A + CoA.","definition_xrefs":["EC:2.3.1.115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-malonyltransferase activity","termid":"GO:0050736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"isoflavone-7-O-beta-glucoside 6''-O-malonyltransferase activity","secondary_identifiers":["RHEA:15581","MetaCyc:RXN-4703"],"synonyms":[{"name":"MAT-7","type":"related"},{"name":"flavone (flavonol) 7-O-glycoside malonyltransferase activity","type":"related"},{"name":"flavone/flavonol 7-O-beta-D-glucoside malonyltransferase activity","type":"related"},{"name":"malonyl-CoA:flavone/flavonol 7-O-glucoside malonyltransferase activity","type":"related"},{"name":"malonyl-CoA:isoflavone-7-O-beta-D-glucoside 6''-O-malonyltransferase activity","type":"related"},{"name":"malonyl-coenzyme A:flavone/flavonol-7-O-glycoside malonyltransferase activity","type":"related"},{"name":"malonyl-coenzyme A:isoflavone 7-O-glucoside-6''-malonyltransferase activity","type":"related"}],"termid":"GO:0047164"}


id: PBO:0057180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 331","termid":"PBO:0057180"}


id: GO:0032067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of DNA in a site specific manner. Cleavage is dependent on the presence of a specific recognition site in the DNA which must be modified (e.g. methylated, hydroxymethylated, glucosyl-hydroxymethylated).","definition_xrefs":["PMID:12654995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction endodeoxyribonuclease activity","termid":"GO:0015666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"type IV site-specific deoxyribonuclease activity","synonyms":[{"name":"type IV restriction enzyme activity","type":"exact"}],"termid":"GO:0032067"}


id: PBO:0071155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 20","termid":"PBO:0071155"}


id: GO:0098529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a neuromuscular junction that targets a skeletal muscle fiber.","definition_xrefs":["GOC:mtg_OBO2OWL_2013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular junction development","termid":"GO:0007528"},{"relation_name":"part_of","term_name":"skeletal muscle fiber development","termid":"GO:0048741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromuscular junction development, skeletal muscle fiber","termid":"GO:0098529"}


id: PBO:0083867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein and component of SCF ubiquitin ligase complexes; involved in ubiquitin-dependent protein catabolism; readily monoubiquitinated in vitro by SCF-Ubc4 complexes; SCF-Ucc1 regulates level of Cit2 citrate synthase protein to maintain citrate homeostasis, acts as metabolic switch for glyoxylate cycle; UCC1 transcription is downregulated in cells grown on C2-compounds","termid":"PBO:0083867"}


id: GO:0022037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metencephalon over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GOC:cls","GOC:curators","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metencephalon development","termid":"GO:0022037"}


id: MONDO:0004638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An antiquated term that refers to a non-Hodgkin lymphoma composed of small and medium sized lymphocytes.","definition_xrefs":["NCIT:C26919"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"sarcoma","termid":"MONDO:0005089"},{"relation_name":"is_a","term_name":"lymphatic system cancer","termid":"MONDO:0000612"},{"relation_name":"is_a","term_name":"non-Hodgkin lymphoma","termid":"MONDO:0018908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"lymphosarcoma","secondary_identifiers":["DOID:8675","ICD9:200.0","ICD9:200.1","ICD9:200.7","SCTID:373168002","ICD9:200.10","GARD:6946","NCIT:C27824","SCTID:118601006","MEDGEN:811370","SCTID:188498009","UMLS:C3714542"],"synonyms":[{"name":"diffuse lymphoma","type":"exact"},{"name":"lymphosarcoma","type":"exact"},{"name":"malignant lymphoma (category)","type":"related"}],"termid":"MONDO:0004638","xrefs":{"Monarch":{"xref_id":"0004638"}}}


id: PBO:0089230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria ortholog Clu1","termid":"PBO:0089230"}


id: PBO:0049485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1-8 pseudogene 1","termid":"PBO:0049485"}


id: GO:0005712
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A connection formed between chromatids, visible during meiosis, thought to be the point of the interchange involved in crossing-over.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"condensed nuclear chromosome","termid":"GO:0000794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"chiasma","secondary_identifiers":["Wikipedia:Chiasma_(genetics)"],"termid":"GO:0005712"}


id: GO:0031566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular process in which the contractile ring cytokinetic ring attains its fully functional state.","definition_xrefs":["PMID:25451933","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"},{"relation_name":"is_a","term_name":"actomyosin contractile ring organization","termid":"GO:0044837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0030036","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"actomyosin contractile ring maturation","synonyms":[{"name":"actomyosin contractile ring maintenance","type":"related"},{"name":"cytokinesis, contractile ring maintenance","type":"related"}],"termid":"GO:0031566"}


id: MONDO:0004438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the breast and is not caused by inherited genetic mutations.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma","termid":"MONDO:0004989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"sporadic breast cancer","secondary_identifiers":["MEDGEN:233463","NCIT:C7566","UMLS:C1336076","DOID:8029"],"synonyms":[{"name":"sporadic breast cancer","type":"exact"},{"name":"sporadic breast carcinoma","type":"exact"}],"termid":"MONDO:0004438","xrefs":{"Monarch":{"xref_id":"0004438"}}}


id: GO:0015717
data:
  {"annotated_genes":["SJAG_00276","SJAG_04406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94991,114247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035436"}]},"cv_name":"biological_process","definition":"The directed movement of triose phosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_04406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"triose phosphate transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aldotriose phosphate transport","type":"exact"}],"termid":"GO:0015717","terms_by_termid":{"GO:0035436":null}}


id: PBO:0085515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S16 and bacterial S9; RPS16A has a paralog, RPS16B, that arose from the whole genome duplication","termid":"PBO:0085515"}


id: FYPO:0002593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone phosphorylation occurs to a lower extent than normal. All histone phosphorylation may be affected, or phosphorylation of specific sites on specific histones may be decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone phosphorylation during vegetative growth","synonyms":[{"name":"decreased histone phosphorylation during mitotic cell cycle","type":"related"},{"name":"reduced histone phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002593"}


id: MOD:00763
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation - missing ref","definition_xrefs":["Unimod:310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"biantennary (-1 galactose) N4-glycosylated asparagine","synonyms":[{"name":"Biantennary (-1 galactose)","type":"related"},{"name":"Hex(4)HexNAc(4)","type":"related"}],"termid":"MOD:00763"}


id: MONDO:0032776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 99","secondary_identifiers":["OMIM:618481","DOID:0111634","UMLS:C4760579","MEDGEN:1678930","GARD:22663"],"synonyms":[{"name":"DFNB99","type":"narrow"},{"name":"deafness, autosomal recessive 99","type":"narrow"}],"termid":"MONDO:0032776","xrefs":{"Monarch":{"xref_id":"0032776"}}}


id: PBO:0091011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent flavin oxidoreductase, implicated in cellular detoxification from family members","termid":"PBO:0091011"}


id: MONDO:0100556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of rare movement and seizure disorders caused by changes (disease-causing variants or mutations) in the PRRT2 gene. They include a spectrum of specific disorders including paroxysmal kinesigenic dyskinesia (PKD), benign familial infantile epilepsy (BFIE), paroxysmal kinesigenic dyskinesia with infantile convulsions (PKD/IC) and hemiplegic migraine (HM). In addition, PRRT2 pathogenic variants have been identified in other childhood-onset movement disorders and different types of seizure conditions, such as paroxysmal torticollis, episodic ataxia and familial paroxysmal non-kinesigenic dyskinesia. It’s important to note that these disorders can also have different genetic causes.","definition_xrefs":["PMID:32916768","PMID:33746883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRRT2-associated paroxysmal movement disorder","termid":"MONDO:0100556","xrefs":{"Monarch":{"xref_id":"0100556"}}}


id: MONDO:0006508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete infantile epileptic encephalopathy (obsolete MONDO:0006508)","termid":"MONDO:0006508","xrefs":{"Monarch":{"xref_id":"0006508"}}}


id: GO:0007016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cytoskeleton organization process that directly or indirectly links cytoskeletal filaments to the plasma membrane.","definition_xrefs":["ISBN:0198599323"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoskeletal anchoring at plasma membrane (obsolete GO:0007016)","synonyms":[{"name":"cytoskeletal anchoring activity","type":"related"}],"termid":"GO:0007016"}


id: MONDO:0005403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neonatal systemic lupus erthematosus (obsolete MONDO:0005403)","termid":"MONDO:0005403","xrefs":{"Monarch":{"xref_id":"0005403"}}}


id: FYPO:0004195
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the telomere of a chromosome is normal (i.e. indistinguishable from wild type) during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"},{"relation_name":"is_a","term_name":"normal protein localization to chromosome","termid":"FYPO:0004997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to telomere during meiosis","synonyms":[{"name":"normal protein localisation to chromosome, telomeric region, during meiosis","type":"exact"},{"name":"normal protein localisation to telomere during meiosis","type":"exact"},{"name":"normal protein localization to chromosome, telomeric region, during meiosis","type":"exact"},{"name":"normal protein localization to telomere during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004195"}


id: PBO:0078101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 9","termid":"PBO:0078101"}


id: GO:0030175
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Thin, stiff, actin-based protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal or dendritic growth cone, or a dendritic shaft.","definition_xrefs":["GOC:pr","GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-based cell projection","termid":"GO:0098858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"filopodium","secondary_identifiers":["GO:0030028","Wikipedia:Filopodia","NIF_Subcellular:sao1046371754"],"termid":"GO:0030175"}


id: GO:0031028
data:
  {"annotated_genes":["SJAG_03376","SJAG_01790","SJAG_03936","SJAG_00078","SJAG_03048","SJAG_03342","SJAG_02232","SJAG_01464","SJAG_01386","SJAG_03353","SJAG_04943","SJAG_01805","SJAG_00600","SJAG_00526","SJAG_04597","SJAG_02169","SJAG_04468","SJAG_01188","SJAG_03631","SJAG_00082","SJAG_04776","SJAG_03508","SJAG_00229","SJAG_03592","SJAG_04455","SJAG_03681","SJAG_06270","SJAG_00883","SJAG_02514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76055,91112,96305,102870,108343,109100],"is_not":false,"summary":null,"term":"GO:0031028"},{"annotations":[101508,106991,103201,109056,112145,117906,109189,94725,97539,92599,109499,95339,74667,94810,93616],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0031030"},{"annotations":[95692,91873,104319,112504,89387],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031031"},{"annotations":[106442,115359,91834],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0031029"}]},"cv_name":"biological_process","definition":"The series of molecular signals, mediated by the small GTPase Ras, that results in the initiation of contraction of the contractile ring, at the beginning of cytokinesis and cell division by septum formation. The pathway coordinates chromosome segregation with mitotic exit and cytokinesis.","definition_xrefs":["GOC:mah","PMID:16775007","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00082":null,"SJAG_00229":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00883":null,"SJAG_01188":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02232":null,"SJAG_02514":null,"SJAG_03048":null,"SJAG_03342":null,"SJAG_03353":null,"SJAG_03376":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03936":null,"SJAG_04455":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04776":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"septation initiation signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"SIN","type":"exact"},{"name":"septation initiation network","type":"exact"},{"name":"septation initiation signaling cascade","type":"related"},{"name":"septation initiation signalling","type":"exact"}],"termid":"GO:0031028","terms_by_termid":{"GO:0031028":null,"GO:0031029":null,"GO:0031030":null,"GO:0031031":null}}


id: PBO:0068824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 62, pseudogene","termid":"PBO:0068824"}


id: GO:0009656
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Pigment-protein complex primarily associated to PSII in plants, green algae and cyanobacteria. Involved in state transitions that cause migration to PSI under certain environmental conditions such as high light.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"},{"relation_name":"part_of","term_name":"PSII associated light-harvesting complex II","termid":"GO:0009517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"PSII associated light-harvesting complex II, peripheral complex","termid":"GO:0009656"}


id: PBO:0069847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1133, pseudogene","termid":"PBO:0069847"}


id: PBO:0039572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 66","termid":"PBO:0039572"}


id: PBO:0063585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PET117 cytochrome c oxidase chaperone","termid":"PBO:0063585"}


id: GO:0052885
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + all-trans-retinyl ester = 11-cis-retinol + fatty acid.","definition_xrefs":["RHEA:31771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity","secondary_identifiers":["MetaCyc:RXN-12550","KEGG_REACTION:R08388"],"synonyms":[{"name":"all-trans-retinol isomerase:hydrolase activity","type":"broad"},{"name":"all-trans-retinyl ester acylhydrolase, 11-cis retinol forming activity","type":"related"},{"name":"all-trans-retinylester 11-cis isomerohydrolase activity","type":"related"},{"name":"retinoid isomerohydrolase activity","type":"broad"},{"name":"retinol isomerase activity","type":"broad"}],"termid":"GO:0052885"}


id: FYPO:0001765
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA modification, the covalent alteration of one or more nucleotides within a tRNA molecule, is abnormal.","definition_xrefs":["PomBase:mah","GO:0006400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA modification","termid":"FYPO:0000370"},{"relation_name":"is_a","term_name":"abnormal tRNA processing","termid":"FYPO:0001554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000294","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal tRNA modification","synonyms":[{"name":"abnormal tRNA modification during mitotic cell cycle","type":"related"},{"name":"abnormal tRNA modification during vegetative growth","type":"exact"}],"termid":"FYPO:0001765"}


id: GO:0046137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vitamin metabolic process","termid":"GO:0030656"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"vitamin metabolic process","termid":"GO:0006766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"negative regulation of vitamin metabolic process","synonyms":[{"name":"down regulation of vitamin metabolic process","type":"exact"},{"name":"down-regulation of vitamin metabolic process","type":"exact"},{"name":"downregulation of vitamin metabolic process","type":"exact"},{"name":"inhibition of vitamin metabolic process","type":"narrow"},{"name":"negative regulation of vitamin metabolism","type":"exact"}],"termid":"GO:0046137"}


id: MONDO:0018655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy, hypomyelinating, 7, with or without oligodontia and/or hypogonadotropic hypogonadism","termid":"MONDO:0011897"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hypomyelination-cerebellar atrophy-hypoplasia of the corpus callosum syndrome","secondary_identifiers":["NANDO:2201295","MEDGEN:1842862","Orphanet:447893","UMLS:C5681201","GARD:17773","NANDO:1200583"],"termid":"MONDO:0018655","xrefs":{"Monarch":{"xref_id":"0018655"}}}


id: PR:Q10432
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ccq1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil quantitatively-enriched protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.07","synonyms":[{"name":"SMC protein ccq1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ccq1","type":"exact"},{"name":"structural maintenance of chromosomes protein ccq1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10432"}


id: PBO:0024817
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CHS1, CHS2, CHS3 triple mutant","termid":"PBO:0024817"}


id: PBO:0005424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC subunit Nse3","termid":"PBO:0005424"}


id: PBO:0053422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 364","termid":"PBO:0053422"}


id: FYPO:0001968
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased glucosyltransferase activity","termid":"FYPO:0001089"},{"relation_name":"is_a","term_name":"abnormal 1,3-beta-D-glucan synthase activity","termid":"FYPO:0001967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"increased 1,3-beta-D-glucan synthase activity","termid":"FYPO:0001968"}


id: PBO:0085455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Potassium transporter that mediates K+ influx; activates high-affinity Ca2+ influx system (HACS) during mating pheromone response; expression up-regulated in response to alpha factor; localized to sites of polarized growth; member of a fungal-specific gene family; potential Cdc28p substrate; KCH1 has a paralog, PRM6, that arose from the whole genome duplication","termid":"PBO:0085455"}


id: PBO:0056509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallo-beta-lactamase domain containing 1","termid":"PBO:0056509"}


id: GO:1904180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of membrane depolarization.","definition_xrefs":["PMID:20826763","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization","termid":"GO:0003254"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"negatively_regulates","term_name":"membrane depolarization","termid":"GO:0051899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of membrane depolarization","synonyms":[{"name":"down regulation of membrane depolarization","type":"exact"},{"name":"down-regulation of membrane depolarization","type":"exact"},{"name":"downregulation of membrane depolarization","type":"exact"},{"name":"inhibition of membrane depolarization","type":"narrow"}],"termid":"GO:1904180"}


id: PBO:0067403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 510, pseudogene","termid":"PBO:0067403"}


id: PBO:0043258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 16","termid":"PBO:0043258"}


id: PBO:0109257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120 member A","termid":"PBO:0109257"}


id: GO:0120274
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a virus component, and in cooperation with a nearby primary receptor, initiating a change in cell activity.","definition_xrefs":["GOC:ha","PMID:16051304","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exogenous protein binding","termid":"GO:0140272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"virus coreceptor activity","synonyms":[{"name":"viral coreceptor activity","type":"exact"}],"termid":"GO:0120274"}


id: GO:0035136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the forelimb are generated and organized. The forelimbs are the front limbs of an animal, e.g. the arms of a human.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limb morphogenesis","termid":"GO:0035108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forelimb morphogenesis","secondary_identifiers":["GO:0035140"],"synonyms":[{"name":"arm morphogenesis","type":"narrow"}],"termid":"GO:0035136"}


id: GO:1903098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of the formation of nucleosomes containing the histone H3 variant CENP-A to form centromeric chromatin. This specialised chromatin occurs at centromeric region in point centromeres, and the central core in modular centromeres.","definition_xrefs":["GOC:TermGenie","PMID:24710126","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of CENP-A containing nucleosome assembly (obsolete GO:1903098)","synonyms":[{"name":"down regulation of CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"down regulation of CENP-A deposition","type":"related"},{"name":"down regulation of CENP-A loading","type":"related"},{"name":"down regulation of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"down regulation of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"down regulation of centromere specific nucleosome exchange","type":"related"},{"name":"down regulation of centromere-specific histone exchange","type":"exact"},{"name":"down regulation of centromere-specific nucleosome assembly","type":"exact"},{"name":"down regulation of centromeric DNA replication-independent nucleosome assembly","type":"exact"},{"name":"down-regulation of CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"down-regulation of CENP-A deposition","type":"related"},{"name":"down-regulation of CENP-A loading","type":"related"},{"name":"down-regulation of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"down-regulation of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"down-regulation of centromere specific nucleosome exchange","type":"related"},{"name":"down-regulation of centromere-specific histone exchange","type":"exact"},{"name":"down-regulation of centromere-specific nucleosome assembly","type":"exact"},{"name":"down-regulation of centromeric DNA replication-independent nucleosome assembly","type":"exact"},{"name":"downregulation of CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"downregulation of CENP-A deposition","type":"related"},{"name":"downregulation of CENP-A loading","type":"related"},{"name":"downregulation of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"downregulation of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"downregulation of centromere specific nucleosome exchange","type":"related"},{"name":"downregulation of centromere-specific histone exchange","type":"exact"},{"name":"downregulation of centromere-specific nucleosome assembly","type":"exact"},{"name":"downregulation of centromeric DNA replication-independent nucleosome assembly","type":"exact"},{"name":"inhibition of CENP-A containing nucleosome assembly at centromere","type":"narrow"},{"name":"inhibition of CENP-A deposition","type":"related"},{"name":"inhibition of CENP-A loading","type":"related"},{"name":"inhibition of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"inhibition of DNA replication-independent nucleosome assembly at centromere","type":"narrow"},{"name":"inhibition of centromere specific nucleosome exchange","type":"related"},{"name":"inhibition of centromere-specific histone exchange","type":"narrow"},{"name":"inhibition of centromere-specific nucleosome assembly","type":"narrow"},{"name":"inhibition of centromeric DNA replication-independent nucleosome assembly","type":"narrow"},{"name":"negative regulation of CENP-A deposition","type":"related"},{"name":"negative regulation of CENP-A loading","type":"related"},{"name":"negative regulation of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"negative regulation of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"negative regulation of centromere specific nucleosome exchange","type":"related"},{"name":"negative regulation of centromere-specific histone exchange","type":"exact"},{"name":"negative regulation of centromere-specific nucleosome assembly","type":"exact"},{"name":"negative regulation of centromeric DNA replication-independent nucleosome assembly","type":"exact"}],"termid":"GO:1903098"}


id: MONDO:0010006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sandhoff disease is a lysosomal storage disorder from the GM2 gangliosidosis family and is characterized by central nervous system degeneration.","definition_xrefs":["Orphanet:796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"GM2 gangliosidosis","termid":"MONDO:0017720"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"cerebral lipidosis with dementia","termid":"MONDO:0020143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005559","MONDO:0002039","MONDO:0005066","MONDO:0002561","MONDO:0005328","MONDO:0005244"],"is_obsolete":false,"name":"Sandhoff disease","secondary_identifiers":["MEDGEN:11313","NCIT:C85052","icd11.foundation:708581915","MESH:D012497","NORD:1688","DOID:3323","GARD:2521","NANDO:2201200","OMIM:268800","SCTID:23849003","UMLS:C0036161","ICD10CM:E75.01","NANDO:1200072"],"synonyms":[{"name":"Beta-hexosaminidase-beta-subunit deficiency","type":"related"},{"name":"GM2 gangliosidosis 0 variant","type":"exact"},{"name":"GM2 gangliosidosis, 0 variant","type":"related"},{"name":"GM2 gangliosidosis, type 2","type":"related"},{"name":"GM2-gangliosidosis, type 2","type":"related"},{"name":"Hexosaminidases A and B deficiency","type":"exact"},{"name":"Hexosaminidases a and B deficiency","type":"related"},{"name":"Sandhoff Jatzkewitz disease","type":"exact"},{"name":"Sandhoff disease","type":"exact"},{"name":"Sandhoff disease, adult type","type":"related"},{"name":"Sandhoff disease, infantile type","type":"related"},{"name":"Sandhoff disease, infantile, juvenile, and adult forms","type":"exact"},{"name":"Sandhoff disease, juvenile type","type":"related"},{"name":"Sandhoff-Jatzkewitz-Pilz disease","type":"related"},{"name":"hexosaminidase A and B deficiency disease","type":"related"},{"name":"total hexosaminidase deficiency","type":"related"}],"termid":"MONDO:0010006","xrefs":{"Monarch":{"xref_id":"0010006"}}}


id: GO:0102189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4alpha-hydroxymethyl-5alpha-cholesta-7,24-dien-3beta-ol + O2 + NADH(2-) + H+ = 4alpha-formyl-5alpha-cholesta-7,24-dien-3beta-ol + NAD(1-) + 2 H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4alpha-hydroxymethyl-5alpha-cholesta-7,24-dien-3beta-ol-4alpha-methyl oxidase activity (obsolete GO:0102189)","termid":"GO:0102189"}


id: FYPO:0005773
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is elongated, has no septum, and contains one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated aseptate vegetative cell","termid":"FYPO:0000950"},{"relation_name":"is_a","term_name":"elongated mononucleate vegetative cell","termid":"FYPO:0001916"},{"relation_name":"is_a","term_name":"aseptate mononucleate vegetative cell","termid":"FYPO:0003785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"elongated mononucleate aseptate vegetative cell","synonyms":[{"name":"elongated aseptate mononucleate vegetative cell","type":"exact"},{"name":"elongated mononucleate aseptate cells during vegetative growth","type":"exact"},{"name":"elongated mononucleate aseptate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005773"}


id: GO:0051128
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id: SO:0001210
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of mRNA (not divisible by 3 bases) that is skipped or added during the process of translational frameshifting (GO:0006452), causing the reading frame to be different.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translational_frameshift","secondary_identifiers":["http://en.wikipedia.org/wiki/Translational_frameshift"],"synonyms":[{"name":"INSDC_qualifier:ribosomal_slippage","type":"exact"},{"name":"ribosomal frameshift","type":"exact"},{"name":"ribosomal slippage","type":"exact"},{"name":"translational frameshift","type":"exact"}],"termid":"SO:0001210"}


id: GO:0004553
data:
  {"annotated_genes":["SJAG_03032","SJAG_04238","SJAG_02711","SJAG_03646","SJAG_00485","SJAG_04301","SJAG_03824","SJAG_04859","SJAG_04851","SJAG_02131","SJAG_03444","SJAG_02076","SJAG_04363","SJAG_04789","SJAG_01029","SJAG_02649","SJAG_05001","SJAG_02590","SJAG_05272","SJAG_01858","SJAG_04327","SJAG_02435","SJAG_02799","SJAG_02949","SJAG_02192","SJAG_03280","SJAG_02446","SJAG_01883","SJAG_01017","SJAG_00096","SJAG_00667","SJAG_02718","SJAG_00310","SJAG_04850","SJAG_01171","SJAG_04864","SJAG_00620","SJAG_01888","SJAG_02478","SJAG_03295"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64161,77790,90557],"is_not":false,"summary":null,"term":"GO:0004553"},{"annotations":[73236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004555"},{"annotations":[103532,103531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004558"},{"annotations":[62100,64833,59967,60607,67831,68875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004556"},{"annotations":[69613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004557"},{"annotations":[90167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004559"},{"annotations":[117631,89301,110362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008422"},{"annotations":[79951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004568"},{"annotations":[71042,62686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052861"},{"annotations":[89231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106407"},{"annotations":[80568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004573"},{"annotations":[60490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004339"},{"annotations":[57932,70105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051118"},{"annotations":[75854,81854,79685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042973"},{"annotations":[103881,75026,103880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046557"},{"annotations":[78834,72345,72242,75023,97006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004338"},{"annotations":[78575,76946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015926"},{"annotations":[98844,64062,57549,58166,57935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008496"},{"annotations":[68171,80547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004571"},{"annotations":[78579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004575"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any O-glycosyl bond.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on glycosyl bonds","termid":"GO:0016798"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00096":null,"SJAG_00310":null,"SJAG_00485":null,"SJAG_00620":null,"SJAG_00667":null,"SJAG_01017":null,"SJAG_01029":null,"SJAG_01171":null,"SJAG_01858":null,"SJAG_01883":null,"SJAG_01888":null,"SJAG_02076":null,"SJAG_02131":null,"SJAG_02192":null,"SJAG_02435":null,"SJAG_02446":null,"SJAG_02478":null,"SJAG_02590":null,"SJAG_02649":null,"SJAG_02711":null,"SJAG_02718":null,"SJAG_02799":null,"SJAG_02949":null,"SJAG_03032":null,"SJAG_03280":null,"SJAG_03295":null,"SJAG_03444":null,"SJAG_03646":null,"SJAG_03824":null,"SJAG_04238":null,"SJAG_04301":null,"SJAG_04327":null,"SJAG_04363":null,"SJAG_04789":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_04859":null,"SJAG_04864":null,"SJAG_05001":null,"SJAG_05272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"hydrolase activity, hydrolyzing O-glycosyl compounds","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.2.1.-","Reactome:R-HSA-5694563","Reactome:R-HSA-9661820","GO:0016800","Reactome:R-HSA-6786652"],"synonyms":[{"name":"O-glucosyl hydrolase activity","type":"exact"}],"termid":"GO:0004553","terms_by_termid":{"GO:0004338":null,"GO:0004339":null,"GO:0004553":null,"GO:0004555":null,"GO:0004556":null,"GO:0004557":null,"GO:0004558":null,"GO:0004559":null,"GO:0004568":null,"GO:0004571":null,"GO:0004573":null,"GO:0004575":null,"GO:0008422":null,"GO:0008496":null,"GO:0015926":null,"GO:0042973":null,"GO:0046557":null,"GO:0051118":null,"GO:0052861":null,"GO:0106407":null}}


id: MONDO:0021501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the small intestine.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal benign neoplasm","termid":"MONDO:0003062"},{"relation_name":"is_a","term_name":"small intestine neoplasm","termid":"MONDO:0004251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign neoplasm of small intestine","secondary_identifiers":["ICD9:211.2","UMLS:C0153944","NCIT:C3600","SCTID:92385005","MEDGEN:56324"],"synonyms":[{"name":"benign neoplasm of the small intestine","type":"exact"},{"name":"benign small intestinal neoplasm","type":"exact"},{"name":"benign small intestinal tumor","type":"exact"},{"name":"benign small intestinal tumour","type":"exact"},{"name":"benign small intestine neoplasm","type":"exact"},{"name":"benign small intestine tumor","type":"exact"},{"name":"benign small intestine tumour","type":"exact"},{"name":"benign tumor of small intestine","type":"exact"},{"name":"benign tumor of the small intestine","type":"exact"},{"name":"benign tumour of small intestine","type":"exact"},{"name":"benign tumour of the small intestine","type":"exact"},{"name":"small intestine benign neoplasm","type":"exact"}],"termid":"MONDO:0021501","xrefs":{"Monarch":{"xref_id":"0021501"}}}


id: GO:0102454
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin + UDP-D-galactose = cyanidin 3-O-beta-D-galactoside betaine + UDP.","definition_xrefs":["RHEA:35631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"cyanidin 3-O-galactosyltransferase activity","secondary_identifiers":["EC:2.4.1.294","MetaCyc:RXN-13960"],"termid":"GO:0102454"}


id: MONDO:0000794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving a beta-lactam.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-lactam allergy (obsolete MONDO:0000794)","secondary_identifiers":["DOID:0060519"],"synonyms":[{"name":"allergy of beta-lactam","type":"exact"},{"name":"beta-lactam allergic disease","type":"exact"}],"termid":"MONDO:0000794","xrefs":{"Monarch":{"xref_id":"0000794"}}}


id: FYPO:0005517
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing 6-azauracil.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0000139","FYPO:0000257","FYPO:0002060","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on 6-azauracil","synonyms":[{"name":"normal cell population growth in presence of 6-azauracil","type":"exact"},{"name":"normal cell population growth on 6-azauracil","type":"exact"},{"name":"normal cellular response to 6-azauracil","type":"related"},{"name":"normal vegetative cell population growth on 6-azauracil","type":"exact"}],"termid":"FYPO:0005517"}


id: GO:0016868
data:
  {"annotated_genes":["SJAG_02009","SJAG_01209","SJAG_02783","SJAG_03723","SJAG_00978","SJAG_00134"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72752,73689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004610"},{"annotations":[117844,78370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004614"},{"annotations":[74193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004619"},{"annotations":[80982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004615"},{"annotations":[75198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008973"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphate group from one position to another within a single molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00134":null,"SJAG_00978":null,"SJAG_01209":null,"SJAG_02009":null,"SJAG_02783":null,"SJAG_03723":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"intramolecular phosphotransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:5.4.2.-","GO:0016777"],"synonyms":[{"name":"intramolecular transferase activity, phosphotransferases","type":"exact"},{"name":"phosphomutase activity","type":"exact"},{"name":"phosphotransferase activity, with regeneration of donors, apparently catalyzing intramolecular transfers","type":"exact"}],"termid":"GO:0016868","terms_by_termid":{"GO:0004610":null,"GO:0004614":null,"GO:0004615":null,"GO:0004619":null,"GO:0008973":null}}


id: GO:0030568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of the serine endopeptidase plasmin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete plasmin inhibitor activity (obsolete GO:0030568)","synonyms":[{"name":"plasmin inhibitor activity","type":"exact"}],"termid":"GO:0030568"}


id: FYPO:0002406
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, contains one or more septa, and is curved along the long axis, and the cell diameter is larger than normal and the cell length is shorter than normal. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"viable curved stubby vegetative cell","termid":"FYPO:0002405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000005","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"viable curved stubby septated vegetative cell","synonyms":[{"name":"curved stubby septated viable cell","type":"exact"},{"name":"viable curved stubby septated cell during vegetative growth","type":"exact"},{"name":"viable curved stubby septated vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable curved watermelon-shaped septated vegetative cell","type":"exact"}],"termid":"FYPO:0002406"}


id: GO:0043721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybutanoyl-CoA = vinylacetyl-CoA + H2O.","definition_xrefs":["EC:4.2.1.120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"4-hydroxybutanoyl-CoA dehydratase activity","secondary_identifiers":["KEGG_REACTION:R05337","MetaCyc:RXN-8890","RHEA:26530"],"synonyms":[{"name":"4-hydroxybutanoyl-CoA hydro-lyase","type":"exact"},{"name":"4-hydroxybutyryl-CoA dehydratase activity","type":"exact"},{"name":"gamma-hydroxybutanoyl-CoA dehydratase activity","type":"exact"},{"name":"gamma-hydroxybutyryl-CoA dehydratase activity","type":"exact"}],"termid":"GO:0043721"}


id: GO:0002474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules.","definition_xrefs":["GOC:add","PMID:15771591","PMID:15224092","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of peptide antigen via MHC class I","secondary_identifiers":["Reactome:R-HSA-983169"],"synonyms":[{"name":"peptide antigen processing and presentation via MHC class I","type":"exact"}],"termid":"GO:0002474"}


id: PBO:0073745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 3 pseudogene 1","termid":"PBO:0073745"}


id: GO:1904496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of substance P secretion, neurotransmission.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15292051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter secretion","termid":"GO:0001956"},{"relation_name":"is_a","term_name":"positive regulation of substance P secretion","termid":"GO:1904460"},{"relation_name":"is_a","term_name":"regulation of substance P secretion, neurotransmission","termid":"GO:1904494"},{"relation_name":"positively_regulates","term_name":"substance P secretion, neurotransmission","termid":"GO:1990793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of substance P secretion, neurotransmission","synonyms":[{"name":"activation of substance P secretion, neurotransmission","type":"narrow"},{"name":"up regulation of substance P secretion, neurotransmission","type":"exact"},{"name":"up-regulation of substance P secretion, neurotransmission","type":"exact"},{"name":"upregulation of substance P secretion, neurotransmission","type":"exact"}],"termid":"GO:1904496"}


id: PBO:0053427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 370","termid":"PBO:0053427"}


id: GO:0102984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sulfonatoacetaldehyde + H2O + NAD = sulfonatoacetate + NADH + 2 H+.","definition_xrefs":["EC:1.2.1.73","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"sulfoacetaldehyde dehydrogenase activity","secondary_identifiers":["RHEA:25637","MetaCyc:RXN-9592"],"termid":"GO:0102984"}


id: GO:0052018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of RNA in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of RNA levels in host (obsolete GO:0052018)","synonyms":[{"name":"modulation by symbiont of host RNA levels","type":"exact"}],"termid":"GO:0052018"}


id: PBO:0002199
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.14","termid":"PBO:0002199"}


id: MONDO:0000745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cessation of breathing and/or cardiac function.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"congestive heart failure","termid":"MONDO:0005009"},{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiac arrest","secondary_identifiers":["ICD10CM:I46","DOID:0060319","ICD9:427.5","MEDGEN:5456","UMLS:C0018790","icd11.foundation:395422191","MESH:D006323","SCTID:410429000"],"synonyms":[{"name":"cardiopulmonary arrest","type":"exact"},{"name":"circulatory arrest","type":"exact"}],"termid":"MONDO:0000745","xrefs":{"Monarch":{"xref_id":"0000745"}}}


id: GO:0052432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of programmed cell death in the symbiont, where programmed cell death proceeds by apoptosis. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont apoptosis (obsolete GO:0052432)","synonyms":[{"name":"modulation by organism of symbiont apoptosis","type":"exact"},{"name":"modulation by organism of symbiont apoptotic programmed cell death","type":"exact"}],"termid":"GO:0052432"}


id: PBO:0063353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCOLCE antisense RNA 1","termid":"PBO:0063353"}


id: GO:0050551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = diphosphate + myrcene.","definition_xrefs":["RHEA:16965","EC:4.2.3.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"myrcene synthase activity","secondary_identifiers":["MetaCyc:RXN-5110","KEGG_REACTION:R02009"],"synonyms":[{"name":"geranyl-diphosphate diphosphate-lyase (myrcene-forming) activity","type":"exact"}],"termid":"GO:0050551"}


id: PBO:0057144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR222/221 cluster host gene","termid":"PBO:0057144"}


id: MONDO:0002772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the ventricles of the brain.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cerebral meningioma","termid":"MONDO:0003772"},{"relation_name":"is_a","term_name":"cerebral ventricle cancer","termid":"MONDO:0002682"},{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"},{"relation_name":"is_a","term_name":"malignant tumor of meninges","termid":"MONDO:0021322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"intraventricular meningioma","secondary_identifiers":["NCIT:C5273","UMLS:C1334271","MEDGEN:232669","DOID:3772"],"synonyms":[{"name":"brain ventricle meningioma (disease)","type":"exact"},{"name":"meningioma (disease) of brain ventricle","type":"exact"}],"termid":"MONDO:0002772","xrefs":{"Monarch":{"xref_id":"0002772"}}}


id: PBO:0046072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit L pseudogene 3","termid":"PBO:0046072"}


id: FYPO:0001916
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains one nucleus, is longer than normal, and has a greater length:diameter ratio than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"elongated mononucleate vegetative cell","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"elongated mononucleate cell during mitotic cell cycle","type":"related"},{"name":"elongated mononucleate cell during vegetative growth","type":"exact"},{"name":"long mononucleate cell","type":"exact"}],"termid":"FYPO:0001916","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: MONDO:0019403
data:
  {"annotated_genes":["SJAG_02539","SJAG_01077","SJAG_03153","SJAG_00930"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87280,87279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009134"},{"annotations":[87323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007109"},{"annotations":[87273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012992"}]},"cv_name":"mondo","definition":"Congenital dyserythropoietic anemia (CDA) is a heterogenous group of hematological disorders of late erythropoiesis and red cell abnormalities that lead to anemia. Five types of CDA are defined: CDA I, CDA II, CDA III, CDA IV and thrombocytopenia with CDA.","definition_xrefs":["Orphanet:85"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00930":null,"SJAG_01077":null,"SJAG_02539":null,"SJAG_03153":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"congenital dyserythropoietic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0002876","icd11.foundation:899830967","ICD9:285.8","GARD:1999","MEDGEN:8064","NANDO:2200615","OMIMPS:224120","ICD10CM:D64.4","NANDO:1200885","DOID:1338","MESH:D000742","NANDO:2100178","NCIT:C84646","SCTID:52951008"],"synonyms":[{"name":"CDA","type":"exact"},{"name":"anemia, congenital dyserythropoietic","type":"exact"},{"name":"congenital dyshaematopoietic anaemia","type":"exact"},{"name":"congenital dyshaematopoietic anemia","type":"exact"},{"name":"dyserythropoietic anemia, congenital","type":"related"}],"termid":"MONDO:0019403","terms_by_termid":{"MONDO:0007109":null,"MONDO:0009134":null,"MONDO:0012992":null},"xrefs":{"Monarch":{"xref_id":"0019403"}}}


id: PBO:0074964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-6","termid":"PBO:0074964"}


id: MONDO:0700202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bunyaviridae infectious disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bunyaviridae infectious disease, non-human animal","termid":"MONDO:0700202","xrefs":{"Monarch":{"xref_id":"0700202"}}}


id: MONDO:0005564
data:
  {"annotated_genes":["SJAG_03689","SJAG_00579","SJAG_01111","SJAG_04213","SJAG_04755","SJAG_05313"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007959"},{"annotations":[88180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"},{"annotations":[87009,87008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012252"},{"annotations":[89184,89185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"}]},"cv_name":"mondo","definition":"A usually malignant neoplasm composed of primitive (immature) tissues that resemble fetal tissues. Medulloblastoma, Ependymoblastoma, Pineoblastoma, and Wilms tumor are representative embryonal neoplasms. --2003","definition_xrefs":["NCIT:C3264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00579":null,"SJAG_01111":null,"SJAG_03689":null,"SJAG_04213":null,"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"is_obsolete":false,"name":"embryonal neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D009373","UMLS:C0027654","MEDGEN:45034","ONCOTREE:EMBT","DOID:688","EFO:0005784"],"synonyms":[{"name":"EMBT","type":"related"},{"name":"embryo neoplasm","type":"exact"},{"name":"embryonal cancer","type":"related"},{"name":"embryonal neoplasm","type":"exact"},{"name":"embryonal tumor","type":"exact"},{"name":"embryonal tumour","type":"exact"}],"termid":"MONDO:0005564","terms_by_termid":{"MONDO:0007959":null,"MONDO:0011014":null,"MONDO:0012252":null,"MONDO:0013224":null},"xrefs":{"Monarch":{"xref_id":"0005564"}}}


id: PBO:0082071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-phosphoglycerate dehydrogenase and alpha-ketoglutarate reductase; 3PG dehydrogenase that catalyzes the first step in serine and glycine biosynthesis; also functions as an alpha-ketoglutarate reductase, converting alpha-ketoglutarate to D-2-hydroxyglutarate (D-2HG); localizes to the cytoplasm; SER3 has a paralog, SER33, that arose from the whole genome duplication","termid":"PBO:0082071"}


id: GO:0003016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"},{"relation_name":"part_of","term_name":"respiratory gaseous exchange by respiratory system","termid":"GO:0007585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory system process","secondary_identifiers":["GO:0010802"],"synonyms":[{"name":"respiratory gaseous exchange","type":"exact"}],"termid":"GO:0003016"}


id: GO:1902882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to oxidative stress.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:16899554","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"regulates","term_name":"response to oxidative stress","termid":"GO:0006979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to oxidative stress","termid":"GO:1902882"}


id: GO:0030326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. A limb is an appendage of an animal used for locomotion or grasping.","definition_xrefs":["GOC:bf","GOC:jl","ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limb morphogenesis","termid":"GO:0035108"},{"relation_name":"is_a","term_name":"embryonic appendage morphogenesis","termid":"GO:0035113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic limb morphogenesis","termid":"GO:0030326"}


id: PBO:0057161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 302f","termid":"PBO:0057161"}


id: MONDO:0010688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary sensory neuropathy characterized by X-linked inheritance of slowly progressing neuropathy with onset in the first or second decade of life.","definition_xrefs":["DOID:0070159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary sensory neuropathy X-linked","secondary_identifiers":["MEDGEN:333359","MESH:C564090","OMIM:310470","UMLS:C1839602"],"synonyms":[{"name":"neuropathy, hereditary sensory, X-linked","type":"related"}],"termid":"MONDO:0010688","xrefs":{"Monarch":{"xref_id":"0010688"}}}


id: GO:1905169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to phagocytic vesicle.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to phagocytic vesicle","termid":"GO:1905161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to phagocytic vesicle","synonyms":[{"name":"regulation of protein localisation in phagocytic vesicle","type":"exact"},{"name":"regulation of protein localisation to phagocytic vesicle","type":"exact"},{"name":"regulation of protein localisation to phagosome","type":"exact"},{"name":"regulation of protein localization in phagocytic vesicle","type":"exact"},{"name":"regulation of protein recruitment to phagosome","type":"exact"}],"termid":"GO:1905169"}


id: PBO:0045704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity tyrosine phosphorylation regulated kinase 3","termid":"PBO:0045704"}


id: MONDO:0014865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive severe congenital neutropenia","termid":"MONDO:0028226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0006025","MONDO:0005046"],"is_obsolete":false,"name":"autosomal recessive severe congenital neutropenia due to CSF3R deficiency","secondary_identifiers":["GARD:17698","MEDGEN:934731","OMIM:617014","Orphanet:420702","UMLS:C4310764","DOID:0112129"],"synonyms":[{"name":"SCN7","type":"related"},{"name":"neutropenia, Severe congenital, 7, autosomal recessive","type":"exact"},{"name":"neutropenia, severe congenital, 7, autosomal recessive","type":"related"}],"termid":"MONDO:0014865","xrefs":{"Monarch":{"xref_id":"0014865"}}}


id: PBO:0077961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 14-2","termid":"PBO:0077961"}


id: PBO:0089483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0300 family protein","termid":"PBO:0089483"}


id: PBO:0036342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain RNA-binding protein Pno1 (predicted)","termid":"PBO:0036342"}


id: FYPO:0002829
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phytochelatin measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular phytochelatin level","synonyms":[{"name":"decreased cellular cadystin level","type":"exact"},{"name":"decreased cellular phytochelatin level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phytochelatin level during vegetative growth","type":"exact"},{"name":"decreased phytochelatin accumulation","type":"related"},{"name":"reduced cellular phytochelatin level","type":"exact"}],"termid":"FYPO:0002829"}


id: MONDO:8000031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete subtype of a disorder (obsolete MONDO:8000031)","secondary_identifiers":["Orphanet:557494"],"termid":"MONDO:8000031","xrefs":{"Monarch":{"xref_id":"8000031"}}}


id: MONDO:0013022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"restless legs syndrome, susceptibility to","termid":"MONDO:0100170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restless legs syndrome, susceptibility to, 7","secondary_identifiers":["UMLS:C2748506","OMIM:612853","MEDGEN:440561"],"synonyms":[{"name":"RLS7","type":"exact"},{"name":"restless legs syndrome 7","type":"exact"},{"name":"restless legs syndrome, susceptibility to, 7","type":"exact"}],"termid":"MONDO:0013022","xrefs":{"Monarch":{"xref_id":"0013022"}}}


id: GO:0048150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the behavior of an organism as a result of an ether stimulus.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult behavior","termid":"GO:0030534"},{"relation_name":"part_of","term_name":"response to ether","termid":"GO:0045472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to ether","synonyms":[{"name":"behavioural response to ether","type":"exact"}],"termid":"GO:0048150"}


id: PBO:0055189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2613","termid":"PBO:0055189"}


id: PBO:0078303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-8","termid":"PBO:0078303"}


id: MONDO:0013728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pregnancy loss, recurrent, susceptibility in which the cause of the disease is a mutation in the F2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pregnancy loss, recurrent, susceptibility","termid":"MONDO:0000144"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy loss, recurrent, susceptibility to, 2","secondary_identifiers":["MEDGEN:482302","OMIM:614390","UMLS:C3280672"],"synonyms":[{"name":"F2 pregnancy loss, recurrent, susceptibility","type":"exact"},{"name":"RPRGL2","type":"related"},{"name":"pregnancy loss, recurrent, susceptibility caused by mutation in F2","type":"exact"},{"name":"pregnancy loss, recurrent, susceptibility to, 2","type":"exact"},{"name":"pregnancy loss, recurrent, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0013728","xrefs":{"Monarch":{"xref_id":"0013728"}}}


id: PBO:0052624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 3","termid":"PBO:0052624"}


id: MONDO:0006477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive carcinoma arising from the ovary. Most patients present with advanced disease. Microscopically, it is characterized by significant cytologic atypia, increased mitotic activity, and necrosis. The prognosis is usually poor.","definition_xrefs":["NCIT:C4509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian carcinoma","termid":"MONDO:0005140"},{"relation_name":"is_a","term_name":"undifferentiated carcinoma","termid":"MONDO:0005617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"undifferentiated ovarian carcinoma","secondary_identifiers":["UMLS:C0346167","SCTID:254856004","EFO:1000605","MEDGEN:83410"],"synonyms":[{"name":"anaplastic carcinoma of ovary","type":"exact"},{"name":"anaplastic carcinoma of the ovary","type":"exact"},{"name":"anaplastic ovarian carcinoma","type":"exact"},{"name":"ovarian undifferentiated carcinoma","type":"exact"},{"name":"ovary undifferentiated carcinoma","type":"exact"},{"name":"undifferentiated carcinoma of ovary","type":"exact"},{"name":"undifferentiated carcinoma of the ovary","type":"exact"},{"name":"undifferentiated ovarian cancer","type":"exact"},{"name":"undifferentiated ovarian carcinoma","type":"exact"}],"termid":"MONDO:0006477","xrefs":{"Monarch":{"xref_id":"0006477"}}}


id: PBO:0066862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 162","termid":"PBO:0066862"}


id: MONDO:0006456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm arising from the epithelial cells of the thymus. Although thymomas are usually encapsulated tumors, they may invade the capsule and infiltrate the surrounding tissues or even metastasize to distant anatomic sites. The following morphologic subtypes are currently recognized: type A, type B, type AB, metaplastic, micronodular, microscopic, and sclerosing thymoma. Thymomas type B are further subdivided into types B1, B2, and B3. Thymoma type B3 usually has the most aggressive clinical course.","definition_xrefs":["NCIT:C3411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thymic epithelial neoplasm","termid":"MONDO:0018079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"thymoma","secondary_identifiers":["UMLS:C0040100","ICDO:8580/1","EFO:1000581","GARD:16922","ICD10CM:D15.0","ONCOTREE:THYM","HP:0100522","DOID:3275","Orphanet:99867","icd11.foundation:33869057","SCTID:444231005","ICD9:239.89","MedDRA:10043670","MEDGEN:52743","MESH:D013945"],"synonyms":[{"name":"THYM","type":"related"},{"name":"primary thymic epithelial neoplasm","type":"exact"},{"name":"primary thymic epithelial tumor","type":"exact"},{"name":"primary thymic epithelial tumour","type":"exact"},{"name":"thymoma","type":"exact"},{"name":"thymoma (disease)","type":"exact"}],"termid":"MONDO:0006456","xrefs":{"Monarch":{"xref_id":"0006456"}}}


id: GO:0044472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism alters or subverts the activity of a calcium channel in another organism via the action of a venom.","definition_xrefs":["GOC:jl","PMID:20920515","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of ion channel activity","termid":"GO:0044560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated perturbation of calcium channel activity","synonyms":[{"name":"envenomation resulting in modulation of calcium channel activity in another organism","type":"exact"},{"name":"envenomation resulting in modulation of calcium channel activity in other organism","type":"exact"}],"termid":"GO:0044472"}


id: PBO:0082986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic and mitochondrial glutathione oxidoreductase; converts oxidized glutathione to reduced glutathione; cytosolic Glr1p is the main determinant of the glutathione redox state of the mitochondrial intermembrane space; mitochondrial Glr1p has a role in resistance to hyperoxia; protein abundance increases in response to DNA replication stress","termid":"PBO:0082986"}


id: PBO:0034669
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_sumoylated_protein_in_cell","termid":"PBO:0034669"}


id: GO:0045047
data:
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id: GO:0090429
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id: MONDO:0016349
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that is present at birth.","definition_xrefs":["NCIT:C98876"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic central nervous system malformation (obsolete MONDO:0015219)","termid":"MONDO:0015219"},{"relation_name":"is_a","term_name":"hydrocephalus","termid":"MONDO:0001150"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital hydrocephalus","secondary_identifiers":["SCTID:47032000","GARD:6682","MEDGEN:9336","UMLS:C0020256","NANDO:2200822","ICD10CM:Q03","MedDRA:10010506","icd11.foundation:1878746673","Orphanet:2185","OMIMPS:236600"],"synonyms":[{"name":"HYC3","type":"related"},{"name":"congenital hydrocephalus","type":"exact"}],"termid":"MONDO:0016349","xrefs":{"Monarch":{"xref_id":"0016349"}}}


id: PBO:0089697
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase, human NT5E family","termid":"PBO:0089697"}


id: GO:0042612
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules.","definition_xrefs":["GOC:add","ISBN:0120781859","ISBN:0781735149","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex","termid":"GO:0042611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"MHC class I protein complex","termid":"GO:0042612"}


id: GO:0050587
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chloride + O2 = chlorite.","definition_xrefs":["RHEA:21404","EC:1.13.11.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"chlorite O2-lyase activity","secondary_identifiers":["UM-BBD_reactionID:r0982","MetaCyc:1.13.11.49-RXN","KEGG_REACTION:R05721","GO:0030065"],"synonyms":[{"name":"chloride:oxygen oxidoreductase activity","type":"related"},{"name":"chlorite dismutase activity","type":"related"}],"termid":"GO:0050587"}


id: MONDO:0005299
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diminished or absent blood supply to the brain caused by obstruction (thrombosis or embolism) of an artery resulting in neurologic damage.","definition_xrefs":["NCIT:C78394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ischemic disease","termid":"MONDO:0005053"},{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain ischemia","secondary_identifiers":["ICD9:348.89","MEDGEN:182975","MESH:D002545","SCTID:389100007","DOID:2316","UMLS:C0917798"],"synonyms":[{"name":"brain ischaemic disease","type":"exact"},{"name":"brain ischemia","type":"exact"},{"name":"brain ischemic disease","type":"exact"},{"name":"cerebrovascular ischemia","type":"exact"},{"name":"ischaemic disease of brain","type":"exact"},{"name":"ischaemic encephalopathy","type":"exact"},{"name":"ischemia cerebrovascular","type":"exact"},{"name":"ischemic disease of brain","type":"exact"},{"name":"ischemic encephalopathy","type":"exact"}],"termid":"MONDO:0005299","xrefs":{"Monarch":{"xref_id":"0005299"}}}


id: PBO:0048282
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GALNT16 and EXD2 antisense RNA 1","termid":"PBO:0048282"}


id: PBO:0051950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPKB intronic transcript 1","termid":"PBO:0051950"}


id: PBO:0075974
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroidogenic acute regulatory protein pseudogene 1","termid":"PBO:0075974"}


id: PBO:0000929
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  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.2.1.8","termid":"PBO:0000929"}


id: MONDO:0012487
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia - intellectual disability syndrome","termid":"MONDO:0008756"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alopecia-intellectual disability syndrome 2","secondary_identifiers":["OMIM:610422","UMLS:C1835852","MESH:C563668","GARD:4291","DOID:0080629","MEDGEN:372142"],"synonyms":[{"name":"AMR syndrome 2","type":"related"},{"name":"APMR2","type":"related"},{"name":"alopecia intellectual disability syndrome 2","type":"related"},{"name":"alopecia with mild to moderate intellectual deficit","type":"related"},{"name":"alopecia-intellectual disability syndrome 2","type":"exact"},{"name":"alopecia-mental retardation syndrome 2","type":"exact"}],"termid":"MONDO:0012487","xrefs":{"Monarch":{"xref_id":"0012487"}}}


id: MONDO:0020535
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"House allergic alveolitis is a hypersensitivity pneumonitis resulting from the inhalation of an antigen to which an individual has been previously sensitized in his/her domestic environment. House allergic alveolitis encompasses summer hypersensitivity pneumonitis, humidifier-induced lung diseases, hot tub lung and legionellosis.","definition_xrefs":["Orphanet:99907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity pneumonitis","termid":"MONDO:0017853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"house allergic alveolitis","secondary_identifiers":["GARD:19703","icd11.foundation:1985023223","UMLS:C4511048","MEDGEN:1387737","SCTID:725415009"],"termid":"MONDO:0020535","xrefs":{"Monarch":{"xref_id":"0020535"}}}


id: PBO:0038324
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malacards_disease_slug","termid":"PBO:0038324"}


id: PBO:0040831
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BIRC6 antisense RNA 1","termid":"PBO:0040831"}


id: MONDO:0009748
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  {"annotated_genes":["SJAG_03320"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87475],"is_not":false,"summary":null,"term":"MONDO:0009748"}]},"cv_name":"mondo","definition":"This syndrome is characterized by the association of an axonal sensory and autonomic neuropathy with spastic paraplegia.","definition_xrefs":["Orphanet:139578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03320":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"hereditary sensory and autonomic neuropathy with spastic paraplegia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:717827000","UMLS:C1850395","OMIM:256840","GARD:16959","icd11.foundation:813709854","MEDGEN:342492","MESH:C564948"],"synonyms":[{"name":"HSAN with spastic paraplegia","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy with spastic paraplegia","type":"exact"},{"name":"neuropathy, hereditary sensory, with spastic paraplegia, autosomal recessive","type":"related"}],"termid":"MONDO:0009748","terms_by_termid":{"MONDO:0009748":null},"xrefs":{"Monarch":{"xref_id":"0009748"}}}


id: PBO:0066380
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radixin","termid":"PBO:0066380"}


id: MONDO:0003709
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anxiety disorder characterized by an intense, irrational fear of venturing out into open places or situations in which help (or escape) might not be available should excessive anxiety or panic symptoms develop.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phobic disorder","termid":"MONDO:0003699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agoraphobia","secondary_identifiers":["MEDGEN:175","DOID:593","NCIT:C34362","SCTID:70691001","EFO:1001872","MESH:D000379","UMLS:C0001818","icd11.foundation:530592394","ICD10CM:F40.0"],"synonyms":[{"name":"fear of open spaces","type":"exact"},{"name":"fear of open spaces (finding)","type":"exact"}],"termid":"MONDO:0003709","xrefs":{"Monarch":{"xref_id":"0003709"}}}


id: MONDO:0056803
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disease that has its basis in the disruption of sulfur compound metabolic process.","definition_xrefs":["MONDO:patterns/disrupts_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mineral metabolism 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id: GO:1901993
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id: PBO:0047715
data:
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id: FYPO:0003804
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing one or more non-fermentable substance(s) as the only carbon source(s).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0000257","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on non-fermentable carbon source","synonyms":[{"name":"normal cell population growth on non-fermentable carbon source","type":"exact"},{"name":"normal vegetative cell population growth on non-fermentable carbon source","type":"exact"}],"termid":"FYPO:0003804"}


id: PBO:0045078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLGAP4 antisense RNA 1","termid":"PBO:0045078"}


id: PBO:0058160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4454","termid":"PBO:0058160"}


id: PBO:0077995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha constant","termid":"PBO:0077995"}


id: MONDO:0006683
data:
  {"annotated_genes":["SJAG_00663"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008076"}]},"cv_name":"mondo","definition":"A brachial plexus disorder characterized by regional paresthesia, pain and muscle weakness, and limited movement in the arm or hand.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nerve plexus disorder","termid":"MONDO:0024432"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00663":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"brachial plexus neuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:1000844","MESH:D020516","UMLS:C0700251","DOID:3690","NCIT:C27194","MEDGEN:148580","ICD9:353.0","SCTID:3548001"],"synonyms":[{"name":"brachial nerve plexus peripheral neuropathy","type":"exact"},{"name":"brachial plexopathy","type":"exact"},{"name":"brachial plexus disorder","type":"exact"},{"name":"peripheral neuropathy of brachial nerve plexus","type":"exact"}],"termid":"MONDO:0006683","terms_by_termid":{"MONDO:0008076":null},"xrefs":{"Monarch":{"xref_id":"0006683"}}}


id: MONDO:0032819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypothyroidism, congenital, nongoitrous","termid":"MONDO:0000045"},{"relation_name":"is_a","term_name":"central congenital hypothyroidism","termid":"MONDO:0016410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypothyroidism, congenital, nongoitrous, 7","secondary_identifiers":["OMIM:618573","MEDGEN:349957","UMLS:C1861106","SCTID:725462002","Orphanet:99832","GARD:16914","DOID:0111836"],"synonyms":[{"name":"CHNG7","type":"related"},{"name":"HYPOTHYROIDISM, CONGENITAL, NONGOITROUS, 7","type":"related"},{"name":"TRH resistance syndrome","type":"exact"},{"name":"central hypothyroidism due to TRH receptor deficiency","type":"exact"},{"name":"hypothyroidism, congenital, nongoitrous, 7","type":"exact"},{"name":"resistance to thyrotropin-releasing hormone syndrome","type":"exact"},{"name":"thyrotropin-releasing hormone resistance, generalised","type":"related"},{"name":"thyrotropin-releasing hormone resistance, generalized","type":"related"}],"termid":"MONDO:0032819","xrefs":{"Monarch":{"xref_id":"0032819"}}}


id: GO:0033008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of mast cell activation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mast cell activation","termid":"GO:0033005"},{"relation_name":"is_a","term_name":"regulation of mast cell activation involved in immune response","termid":"GO:0033006"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"mast cell activation involved in immune response","termid":"GO:0002279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mast cell activation involved in immune response","synonyms":[{"name":"positive regulation of mast cell activation during immune response","type":"related"}],"termid":"GO:0033008"}


id: PBO:0091268
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(1)","termid":"PBO:0091268"}


id: PBO:0077138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tight junction associated protein 1","termid":"PBO:0077138"}


id: PBO:0083685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enolase, a phosphopyruvate hydratase; catalyzes the conversion of 2-phosphoglycerate to phosphoenolpyruvate; complements the growth defect of an ENO1 ENO2 double mutant","termid":"PBO:0083685"}


id: GO:0102045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-chlorobenzoate + O2 + a reduced electron acceptor = 3-chlorobenzoate-cis-3,4-diol + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","PMID:8285670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-chlorobenzoate-3,4-oxygenase activity","secondary_identifiers":["MetaCyc:RXN-10422"],"termid":"GO:0102045"}


id: GO:1904220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of serine C-palmitoyltransferase activity.","definition_xrefs":["GO_REF:0000059","GOC:BHF","GOC:TermGenie","PMID:16120614","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of serine C-palmitoyltransferase activity","synonyms":[{"name":"regulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"regulation of SPT","type":"related"},{"name":"regulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"regulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"},{"name":"regulation of serine palmitoyltransferase","type":"broad"}],"termid":"GO:1904220"}


id: GO:0048806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the genitalia over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"},{"relation_name":"part_of","term_name":"sex differentiation","termid":"GO:0007548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"genitalia development","synonyms":[{"name":"genital development","type":"exact"}],"termid":"GO:0048806"}


id: MONDO:0004005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoma that arises from the rete ovarii. It is composed of elongated tubules. The clinical course is benign.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rete ovarii neoplasm","termid":"MONDO:0003192"},{"relation_name":"is_a","term_name":"ovarian adenoma benign","termid":"MONDO:0005179"},{"relation_name":"is_a","term_name":"glandular cell neoplasm","termid":"MONDO:0024276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rete ovarii adenoma","secondary_identifiers":["UMLS:C1514905","DOID:6837","NCIT:C40018","MEDGEN:271495"],"synonyms":[{"name":"adenoma, rete ovarii, benign","type":"exact"},{"name":"rete ovarii adenoma","type":"exact"}],"termid":"MONDO:0004005","xrefs":{"Monarch":{"xref_id":"0004005"}}}


id: PBO:0002519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine synthase (predicted)","termid":"PBO:0002519"}


id: PBO:0084436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Malate synthase; can accept butyryl-CoA as acyl-CoA donor in addition to traditional substrate acetyl-CoA; recycles glyoxylate generated during allantoin degradation; SWAT-GFP and mCherry fusion proteins localize to the cytosol; expression sensitive to nitrogen catabolite repression and induced by allophanate, an intermediate in allantoin degradation","termid":"PBO:0084436"}


id: PBO:0083949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma subunit of the oligosaccharyltransferase complex of the ER lumen; complex catalyzes asparagine-linked glycosylation of newly synthesized proteins; Ost3p is important for N-glycosylation of a subset of proteins including modification of Pmt2p at N131 and N403","termid":"PBO:0083949"}


id: MONDO:0014482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any intellectual disability-expressive aphasia-facial dysmorphism syndrome in which the cause of the disease is a mutation in the SETBP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 29","secondary_identifiers":["OMIM:616078","DOID:0070059","NORD:1958","GARD:13379","UMLS:C4015141","MEDGEN:863578"],"synonyms":[{"name":"MRD29","type":"exact"},{"name":"SETBP1 Haploinsufficiency Disorder","type":"exact"},{"name":"SETBP1 disorder","type":"related"},{"name":"SETBP1 intellectual disability-expressive aphasia-facial dysmorphism syndrome","type":"exact"},{"name":"SETBP1 related developmental delay","type":"related"},{"name":"SETBP1-related disorder","type":"related"},{"name":"SETBP1-related intellectual disability","type":"related"},{"name":"autosomal dominant intellectual disability 29","type":"exact"},{"name":"autosomal dominant mental retardation 29","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 29","type":"related"},{"name":"intellectual disability, autosomal dominant 29","type":"exact"},{"name":"intellectual disability, autosomal dominant type 29","type":"exact"},{"name":"intellectual disability-expressive aphasia-facial dysmorphism syndrome caused by mutation in SETBP1","type":"exact"},{"name":"mental retardation, autosomal dominant 29","type":"related"},{"name":"mental retardation, autosomal dominant type 29","type":"exact"}],"termid":"MONDO:0014482","xrefs":{"Monarch":{"xref_id":"0014482"}}}


id: PBO:0045003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIM1 rRNA methyltransferase and ribosome maturation factor","termid":"PBO:0045003"}


id: PBO:0084809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0084809"}


id: PBO:0071291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 14","termid":"PBO:0071291"}


id: GO:0007232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated in response to osmotic change, as mediated through a Sho1 osmosensor system.","definition_xrefs":["GOC:jl","PMID:26787842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osmosensory signaling pathway","termid":"GO:0007231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"osmosensory signaling pathway via Sho1 osmosensor","synonyms":[{"name":"osmosensory signalling pathway via Sho1 osmosensor","type":"exact"},{"name":"signal transduction during osmotic stress via Sho1 osmosensor","type":"exact"}],"termid":"GO:0007232"}


id: PBO:0050023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DP beta 1","termid":"PBO:0050023"}


id: FYPO:0004868
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ionizing radiation during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to ionizing radiation during vegetative growth","termid":"FYPO:0000267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to ionizing radiation during mitotic G1 phase","synonyms":[{"name":"decreased growth during cellular response to ionizing radiation during mitotic G1 phase","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to ionizing radiation during mitotic G1 phase","type":"exact"},{"name":"hypersensitive to ionizing radiation during mitotic G1 phase","type":"exact"},{"name":"sensitive to IR during mitotic G1 phase","type":"exact"},{"name":"sensitive to gamma irradiation during mitotic G1 phase","type":"narrow"},{"name":"sensitive to gamma radiation during mitotic G1 phase","type":"narrow"},{"name":"sensitive to ionizing radiation during G1 phase of mitotic cell cycle","type":"exact"},{"name":"sensitive to ionizing radiation during mitotic G1 phase during mitotic cell cycle","type":"related"},{"name":"sensitive to ionizing radiation during mitotic G1 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0004868"}


id: GO:0071846
data:
  {"annotated_genes":["SJAG_03455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76273],"is_not":false,"summary":null,"term":"GO:0071846"}]},"cv_name":"biological_process","definition":"An actin filament severing process that results in the removal of actin filament branches specifically at the branch points.","definition_xrefs":["GOC:jh","GOC:mah","PMID:20362448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament severing","termid":"GO:0051014"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actin filament debranching","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0071846","terms_by_termid":{"GO:0071846":null}}


id: MONDO:0001440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratoconjunctivitis","termid":"MONDO:0004768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"neurotrophic keratoconjunctivitis","secondary_identifiers":["ICD9:370.35","SCTID:77080005","MEDGEN:509777","UMLS:C0155084","DOID:12125"],"termid":"MONDO:0001440","xrefs":{"Monarch":{"xref_id":"0001440"}}}


id: GO:0061723
data:
  {"annotated_genes":["SJAG_01561","SJAG_00115","SJAG_03851","SJAG_06309","SJAG_01783","SJAG_04963"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73582,73844,74865,75157,80634,81649],"is_not":false,"summary":null,"term":"GO:0061723"}]},"cv_name":"biological_process","definition":"The selective degradation of glycogen by macroautophagy.","definition_xrefs":["GOC:autophagy","PMID:21893048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen catabolic process","termid":"GO:0005980"},{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_01561":null,"SJAG_01783":null,"SJAG_03851":null,"SJAG_04963":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0006914","GO:0008150","GO:0006091","GO:0005975"],"is_obsolete":false,"name":"glycophagy","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0061723","terms_by_termid":{"GO:0061723":null}}


id: PBO:0000655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO E3 ligase Pli1","termid":"PBO:0000655"}


id: PBO:0080392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS26 retromer complex component A","termid":"PBO:0080392"}


id: PBO:0062780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 56 subfamily B member 2 pseudogene","termid":"PBO:0062780"}


id: PBO:0046368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 4","termid":"PBO:0046368"}


id: MONDO:0019297
data:
  {"annotated_genes":["SJAG_04745","SJAG_00993","SJAG_02923","SJAG_02342","SJAG_02648","SJAG_01181","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007918"},{"annotations":[88158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011257"},{"annotations":[89118,89119,89117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[87599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[88484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[88274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"}]},"cv_name":"mondo","definition":"Excess fluid collection in tissues, causing swelling. It is the result of obstruction of lymphatic vessels or lymph nodes.","definition_xrefs":["NCIT:C3207"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare genetic skin disease (obsolete MONDO:0019043)","termid":"MONDO:0019043"},{"relation_name":"is_a","term_name":"lymphatic system disorder","termid":"MONDO:0005833"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null,"SJAG_02648":null,"SJAG_02923":null,"SJAG_03453":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphedema","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:234097001","MedDRA:10025282","MEDGEN:6155","DOID:4977","UMLS:C0024236","MESH:D008209","Orphanet:79383","ICD9:457.1"],"synonyms":[{"name":"lymphatic edema","type":"exact"},{"name":"lymphatic edema (morphologic abnormality)","type":"exact"},{"name":"lymphatic oedema","type":"exact"},{"name":"lymphatic oedema (morphologic abnormality)","type":"exact"},{"name":"lymphoedema","type":"exact"}],"termid":"MONDO:0019297","terms_by_termid":{"MONDO:0007918":null,"MONDO:0008104":null,"MONDO:0011257":null,"MONDO:0012371":null,"MONDO:0013186":null,"MONDO:0033669":null},"xrefs":{"Monarch":{"xref_id":"0019297"}}}


id: MONDO:0700119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal chromosome 18q deletion syndrome is a chromosome abnormality that occurs when there is a missing (deleted) copy of genetic material at the end of the long arm (q) of chromosome 18.","definition_xrefs":["GARD:0010865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 18q deletion syndrome","termid":"MONDO:0011147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal chromosome 18q deletion syndrome","secondary_identifiers":["MEDGEN:1382173","UMLS:C4329736"],"synonyms":[{"name":"distal 18q deletion","type":"exact"},{"name":"distal 18q deletion syndrome","type":"exact"},{"name":"distal 18q-","type":"exact"}],"termid":"MONDO:0700119","xrefs":{"Monarch":{"xref_id":"0700119"}}}


id: MONDO:0018927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"SUNCT syndrome (Short-lasting Unilateral Neuralgiform headache attacks with Conjunctival injection and Tearing) is a primary headache disorder characterized by unilateral trigeminal pain that occurs in association with ipsilateral cranial autonomic symptoms (conjunctival injection and tearing).","definition_xrefs":["Orphanet:57145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"trigeminal autonomic cephalalgia","termid":"MONDO:0015530"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUNCT syndrome","secondary_identifiers":["SCTID:725058003","UMLS:C1262087","MedDRA:10061981","MESH:D050798","GARD:9257","NCIT:C85174","MEDGEN:224724"],"synonyms":[{"name":"SUNCT headache","type":"exact"},{"name":"short-lasting unilateral neuralgiform headache attacks with conjunctival injection and tearing","type":"exact"},{"name":"short-lasting, unilateral, neuralgiform headache attacks with conjunctival injection and tearing","type":"exact"}],"termid":"MONDO:0018927","xrefs":{"Monarch":{"xref_id":"0018927"}}}


id: MONDO:0859252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with poor growth and skeletal anomalies","secondary_identifiers":["UMLS:C5676990","MEDGEN:1804653","OMIM:619880"],"termid":"MONDO:0859252","xrefs":{"Monarch":{"xref_id":"0859252"}}}


id: FYPO:0003467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RNA splice site specificity differs from normal. For example, different exons may be included or excluded, or introns in which the normally recognized 3' splice site AG nucleotides are mutated may be spliced.","definition_xrefs":["PMID:17130122","PomBase:mah","PMID:1617727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA splicing, via spliceosome","termid":"FYPO:0002915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"altered splice site specificity","synonyms":[{"name":"abnormal splice site specificity","type":"exact"},{"name":"altered splice site specificity during mitotic cell cycle","type":"related"},{"name":"altered splice site specificity during vegetative growth","type":"exact"}],"termid":"FYPO:0003467"}


id: MONDO:0013729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pregnancy loss, recurrent, susceptibility in which the cause of the disease is a mutation in the ANXA5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pregnancy loss, recurrent, susceptibility","termid":"MONDO:0000144"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy loss, recurrent, susceptibility to, 3","secondary_identifiers":["UMLS:C3280674","MEDGEN:482304","OMIM:614391"],"synonyms":[{"name":"ANXA5 pregnancy loss, recurrent, susceptibility","type":"exact"},{"name":"RPRGL3","type":"related"},{"name":"pregnancy loss, recurrent, susceptibility caused by mutation in ANXA5","type":"exact"},{"name":"pregnancy loss, recurrent, susceptibility to, 3","type":"exact"},{"name":"pregnancy loss, recurrent, susceptibility to, type 3","type":"exact"}],"termid":"MONDO:0013729","xrefs":{"Monarch":{"xref_id":"0013729"}}}


id: PBO:0079146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 8","termid":"PBO:0079146"}


id: PBO:0001477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Ssa1 (predicted)","termid":"PBO:0001477"}


id: PBO:0050888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-L-iduronidase","termid":"PBO:0050888"}


id: GO:0016326
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The hydrolysis of ATP (and GTP) that drives the microtubular motor along microtubules.","definition_xrefs":["GOC:hb"],"gene_count":0,"genotype_count":0,"name":"obsolete kinesin motor activity (obsolete GO:0016326)","synonyms":[{"name":"kinesin motor activity","type":"exact"}],"termid":"GO:0016326"}


id: PBO:0041000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"boule homolog, RNA binding protein","termid":"PBO:0041000"}


id: MONDO:0018211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Balint syndrome is a rare neurologic disease characterized by the triad of optic ataxia, ocular apraxia and simultanagnosia due to posterior parietal lobe lesions. Patients report ophthalmologic difficulties in the absence of underlying ophthalomologic anomalies and present severe visual and spatial disabilities in locating and reaching objects, initiating voluntary eye movements and perceiving more than one object at a time.","definition_xrefs":["Orphanet:363746"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Balint syndrome","secondary_identifiers":["SCTID:765212008","UMLS:C4707368","GARD:21558","MEDGEN:1646315","icd11.foundation:491228434"],"synonyms":[{"name":"Balint-Holmes syndrome","type":"exact"},{"name":"optic ataxia-gaze apraxia-simultanagnosia syndrome","type":"exact"},{"name":"psychic paralysis of visual fixation","type":"exact"}],"termid":"MONDO:0018211","xrefs":{"Monarch":{"xref_id":"0018211"}}}


id: SO:0001532
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region recognized by a recombinase.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specific_recombination_site","termid":"SO:0000299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination_signal_sequence","secondary_identifiers":["http://en.wikipedia.org/wiki/Recombination_Signal_Sequences"],"synonyms":[{"name":"recombination signal sequence","type":"related"}],"termid":"SO:0001532"}


id: PBO:0005334
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemolytic anemia","termid":"PBO:0005334"}


id: PBO:0082726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Ribosome Quality Control (RQC) complex;  RQC is a ribosome-bound complex required for degradation of polypeptides arising from stalled translation; recruits alanine- and threonine-charged tRNA to the A site and directs the elongation of nascent chains independently of mRNA or 40S subunits; monitors translation stress and signals this to Hsf1p","termid":"PBO:0082726"}


id: PBO:0057995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3919","termid":"PBO:0057995"}


id: PBO:0091240
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"truncation LoF variant reverts to normal in strain CBS5557","termid":"PBO:0091240"}


id: PBO:0002520
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.3.1","termid":"PBO:0002520"}


id: MONDO:0003985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that affects the structures of the chest wall. The majority of cases are diffuse large B-cell lymphomas.","definition_xrefs":["NCIT:C6712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"malignant neoplasm of chest wall","termid":"MONDO:0021323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"chest wall lymphoma","secondary_identifiers":["DOID:6758","MEDGEN:232053","UMLS:C1332933"],"synonyms":[{"name":"chest wall cancer","type":"broad"},{"name":"chest wall lymphoma","type":"exact"},{"name":"lymphoma of chest wall","type":"exact"},{"name":"lymphoma of the chest wall","type":"exact"},{"name":"malignant tumour of chest wall","type":"related"},{"name":"primary chest wall lymphoma","type":"exact"}],"termid":"MONDO:0003985","xrefs":{"Monarch":{"xref_id":"0003985"}}}


id: GO:0071186
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the cell adhesion molecules protocadherin-alpha-v4 and protocadherin-gamma-b2, and is involved in the regulation of protein localization to the plasma membrane.","definition_xrefs":["PMID:15347688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protocadherin-alpha-protocadherin-gamma complex","termid":"GO:0071183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protocadherin-alpha-v4-protocadherin-gamma-b2 complex","synonyms":[{"name":"Pcdhga1-Pcdhgb2 complex","type":"narrow"}],"termid":"GO:0071186"}


id: PBO:0029040
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_non-ionic_osmotic_stress","termid":"PBO:0029040"}


id: PBO:0055911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 34 pseudogene 2","termid":"PBO:0055911"}


id: MONDO:0031057
data:
  {"annotated_genes":["SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87561],"is_not":false,"summary":null,"term":"MONDO:0031057"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dyskeratosis congenita, digenic","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5774217","MEDGEN:1823990","OMIM:620040"],"synonyms":[{"name":"DKCD","type":"exact"},{"name":"dyskeratosis congenita, digenic","type":"exact"}],"termid":"MONDO:0031057","terms_by_termid":{"MONDO:0031057":null},"xrefs":{"Monarch":{"xref_id":"0031057"}}}


id: PBO:0068703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 84, pseudogene","termid":"PBO:0068703"}


id: PBO:0000315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER lipid phosphatase (predicted)","termid":"PBO:0000315"}


id: GO:0085037
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane surrounding the symbiont haustorium during symbiosis, derived from the host plasma membrane.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"part_of","term_name":"host cell plasma membrane","termid":"GO:0020002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrahaustorial membrane","termid":"GO:0085037"}


id: GO:0033201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: RDP-glucose + [alpha-D-glucosyl-(1,4)]n = RDP + [alpha-D-glucosyl-(1,4)]n+1, where RDP is ADP or UDP.","definition_xrefs":["PMID:17472966"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-1,4-glucan synthase activity (obsolete GO:0033201)","synonyms":[{"name":"1,4-alpha-glucan synthase activity","type":"exact"}],"termid":"GO:0033201"}


id: PBO:0061787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OCRL inositol polyphosphate-5-phosphatase","termid":"PBO:0061787"}


id: MONDO:0054591
data:
  {"annotated_genes":["SJAG_03321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87340],"is_not":false,"summary":null,"term":"MONDO:0054591"}]},"cv_name":"mondo","definition":"A neurodevelopmental disorder characterized by delayed psychomotor development, intellectual disability, behavioral disorders, mild craniofacial anomalies, and variable congenital defects of the cardiac and/or urogenital systems.","definition_xrefs":["OMIM:617516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Stankiewicz-Isidor syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4479599","MEDGEN:1375936"],"synonyms":[{"name":"STISS","type":"related"},{"name":"Stankiewicz-Isidor syndrome","type":"exact"}],"termid":"MONDO:0054591","terms_by_termid":{"MONDO:0054591":null},"xrefs":{"Monarch":{"xref_id":"0054591"}}}


id: GO:0052904
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + N(1)-acetylspermidine + O2 = 3-acetamidopropanal + H2O2 + putrescine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete N1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity (obsolete GO:0052904)","secondary_identifiers":["Reactome:R-HSA-141348","Reactome:R-HSA-141351"],"termid":"GO:0052904"}


id: GO:0048490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of synaptic vesicle along axonal microtubules from the cell body to the presynapse.","definition_xrefs":["GOC:jid","GOC:lmg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde axonal transport","termid":"GO:0008089"},{"relation_name":"is_a","term_name":"synaptic vesicle transport along microtubule","termid":"GO:0099517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"anterograde synaptic vesicle transport","synonyms":[{"name":"anterograde axonal transport of synaptic vesicle","type":"exact"}],"termid":"GO:0048490"}


id: PBO:0002631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein Klp8","termid":"PBO:0002631"}


id: GO:0061274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesonephric distal tubule over time, from its formation to the mature structure. The mesonephric distal tubule is a mesonephric nephron tubule that begins at the terminal segment of the proximal tubule and ends at the mesonephric connecting tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric nephron tubule development","termid":"GO:0061242"},{"relation_name":"is_a","term_name":"distal tubule development","termid":"GO:0072017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric distal tubule development","termid":"GO:0061274"}


id: MONDO:0019239
data:
  {"annotated_genes":["SJAG_03861","SJAG_04449","SJAG_02791","SJAG_02313","SJAG_02901"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958179"},{"annotations":[88230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958192"},{"annotations":[87303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009736"},{"annotations":[88723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014466"},{"annotations":[88765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011152"},{"annotations":[88355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012596"},{"annotations":[87766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013531"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of serine family amino acid metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02313":null,"SJAG_02791":null,"SJAG_02901":null,"SJAG_03861":null,"SJAG_04449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of serine family metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18968","MEDGEN:1842840","Orphanet:79194","UMLS:C5681286"],"synonyms":[{"name":"disorder of serine or glycine metabolism","type":"related"},{"name":"inborn disorder of serine or glycine metabolism","type":"exact"},{"name":"inborn error of serine family amino acid metabolic process","type":"exact"},{"name":"inborn serine family amino acid metabolic process disorder","type":"exact"},{"name":"rare inborn error of serine family amino acid metabolic process","type":"exact"}],"termid":"MONDO:0019239","terms_by_termid":{"MONDO:0009736":null,"MONDO:0011152":null,"MONDO:0012596":null,"MONDO:0013531":null,"MONDO:0014466":null,"MONDO:0958179":null,"MONDO:0958192":null},"xrefs":{"Monarch":{"xref_id":"0019239"}}}


id: PBO:0069224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 479, pseudogene","termid":"PBO:0069224"}


id: PBO:0031476
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_actin_cortical_patch_internalization","termid":"PBO:0031476"}


id: PBO:0036367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein with a role in clearing protein aggregates (predicted)","termid":"PBO:0036367"}


id: MONDO:0001835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe or complete loss of facial muscle motor function. This condition may result from central or peripheral lesions. Damage to CNS motor pathways from the cerebral cortex to the facial nuclei in the pons leads to facial weakness that generally spares the forehead muscles. facial nerve diseases generally results in generalized hemifacial weakness. neuromuscular junction diseases and muscular diseases may also cause facial paralysis or paresis.","definition_xrefs":["MESH:D005158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palsy","termid":"MONDO:0006496"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial paralysis","secondary_identifiers":["DOID:13934","MEDGEN:5101","UMLS:C0015469","SCTID:280816001"],"synonyms":[{"name":"face palsy","type":"exact"},{"name":"facial palsy","type":"exact"},{"name":"palsy of face","type":"exact"}],"termid":"MONDO:0001835","xrefs":{"Monarch":{"xref_id":"0001835"}}}


id: MONDO:0007282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract that has material basis in variation in the region 2pter-p24.","definition_xrefs":["DOID:0110232","PMID:15933805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 29","secondary_identifiers":["MEDGEN:811739","GARD:18233","OMIM:115800","UMLS:C3805409"],"synonyms":[{"name":"CTRCT29","type":"related"},{"name":"cataract 29","type":"exact"},{"name":"cataract 29 coralliform","type":"exact"},{"name":"cataract 29, coralliform","type":"related"},{"name":"cataract type 29","type":"exact"}],"termid":"MONDO:0007282","xrefs":{"Monarch":{"xref_id":"0007282"}}}


id: PBO:0048908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member C, pseudogene","termid":"PBO:0048908"}


id: PBO:0065382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 9","termid":"PBO:0065382"}


id: GO:0030978
data:
  {"annotated_genes":["SJAG_00424","SJAG_04666","SJAG_02916","SJAG_04184","SJAG_01028","SJAG_02278","SJAG_00610","SJAG_03057","SJAG_04236"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72388,75115,73175,75287,80554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[96839,104782,94308,91309],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving alpha-glucans, compounds composed of glucose residues linked by alpha-D-glucosidic bonds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01028":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"alpha-glucan metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"alpha-glucan metabolism","type":"exact"}],"termid":"GO:0030978","terms_by_termid":{"GO:0070600":null,"GO:0070610":null}}


id: GO:0035554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The signaling process in which signaling from the receptor ROBO is brought to an end, rather than being reversibly modulated.","definition_xrefs":["GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"termination of signal transduction","termid":"GO:0023021"},{"relation_name":"is_a","term_name":"negative regulation of Roundabout signaling pathway","termid":"GO:0035387"},{"relation_name":"part_of","term_name":"Roundabout signaling pathway","termid":"GO:0035385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"termination of Roundabout signal transduction","termid":"GO:0035554"}


id: GO:0031754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an Edg-1 sphingosine 1-phosphate receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial differentiation G protein-coupled receptor binding","termid":"GO:0031753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"Edg-1 sphingosine 1-phosphate receptor binding","synonyms":[{"name":"Edg-1 sphingosine 1-phosphate receptor ligand","type":"narrow"}],"termid":"GO:0031754"}


id: GO:0044554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency or rate of heart contraction of another organism.","definition_xrefs":["GOC:jl","PMID:20923766"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of heart rate in another organism (obsolete GO:0044554)","synonyms":[{"name":"modulation of heart rate in other organism","type":"exact"},{"name":"regulation of heart rate in other organism","type":"exact"}],"termid":"GO:0044554"}


id: PBO:0051069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 5-5","termid":"PBO:0051069"}


id: MONDO:0100534
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A high-grade carcinoma that arises from the renal medulla and is characterized by inactivation of the SMARCB1 gene. It affects children and adults and occurs mainly in patients with sickle cell trait. The majority of the cases occur in the right kidney.","definition_xrefs":["NCIT:C189247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney medullary carcinoma","termid":"MONDO:0006260"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"SMARCB1-deficient kidney medullary carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1817235","UMLS:C5708330"],"termid":"MONDO:0100534","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0100534"}}}


id: PBO:0052385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIF25 antisense RNA 1","termid":"PBO:0052385"}


id: PBO:0086256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates Arf1p, Arf2p to facilitate Golgi trafficking; binds phosphatidylinositol 4-phosphate, which plays a role in TGN localization; has homology to gamma-adaptin; GGA2 has a paralog, GGA1, that arose from the whole genome duplication","termid":"PBO:0086256"}


id: FYPO:0007065
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 20S rRNA precursor measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah","PMID:29641590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell during vegetative growth","termid":"FYPO:0003161"},{"relation_name":"is_a","term_name":"altered rRNA or precursor level","termid":"FYPO:0005996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"20S rRNA precursor absent from cell","synonyms":[{"name":"20S rRNA precursor absent from cell during mitotic cell cycle","type":"related"},{"name":"20S rRNA precursor absent from cell during vegetative growth","type":"exact"},{"name":"20S rRNA precursor transcripts absent from cell during vegetative growth","type":"exact"},{"name":"undetectable 20S rRNA precursor level during vegetative growth","type":"exact"}],"termid":"FYPO:0007065"}


id: PBO:0088588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mre11 complex BRCT domain subunit Nbs1","termid":"PBO:0088588"}


id: PBO:0029077
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_ubiquitinated_protein_in_cell_during_vegetative_growth","termid":"PBO:0029077"}


id: PBO:0040220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha tubulin acetyltransferase 1","termid":"PBO:0040220"}


id: PBO:0068536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 139, pseudogene","termid":"PBO:0068536"}


id: MONDO:0859574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"annular epidermolytic ichthyosis","termid":"MONDO:0011870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"ichthyosis, annular epidermolytic, 2","secondary_identifiers":["MEDGEN:1824037","OMIM:620148","UMLS:C5774264"],"termid":"MONDO:0859574","xrefs":{"Monarch":{"xref_id":"0859574"}}}


id: PBO:0064648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase with EF-hand domain 2","termid":"PBO:0064648"}


id: FYPO:0000702
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that protein affects the binding of one protein to another. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"protein-protein interaction phenotype","synonyms":[{"name":"fission yeast protein binding phenotype","type":"exact"},{"name":"fission yeast protein-protein interaction phenotype","type":"exact"},{"name":"protein binding phenotype","type":"exact"}],"termid":"FYPO:0000702"}


id: PBO:0061601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUBP iron-sulfur cluster assembly factor 2, cytosolic","termid":"PBO:0061601"}


id: FYPO:0008148
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of transcribed  cryptic unstable trancripts (CUTs) measured in a cell is higher than normal.","definition_xrefs":["PMID:25989903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased non functional ncRNA level","termid":"FYPO:0008149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased CUT RNA level","termid":"FYPO:0008148"}


id: PBO:0017851
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leukodystrophy","termid":"PBO:0017851"}


