# terms

id: MONDO:0001384
data:
  {"annotated_genes":["SJAG_03233","SJAG_04553"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032941"},{"annotations":[87873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012154"}]},"cv_name":"mondo","definition":"The condition in which the individual does not see far distances clearly.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"refractive error","termid":"MONDO:0004892"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03233":null,"SJAG_04553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:11830","ICD10CM:H52.1","OMIMPS:160700","MEDGEN:44558","SCTID:57190000","icd11.foundation:1666440799","UMLS:C0027092","HP:0000545","MESH:D009216","ICD9:367.1"],"synonyms":[{"name":"myopia","type":"exact"},{"name":"myopia (disease)","type":"exact"},{"name":"near vision","type":"exact"},{"name":"near-sightedness","type":"exact"},{"name":"short-sightedness","type":"exact"}],"termid":"MONDO:0001384","terms_by_termid":{"MONDO:0012154":null,"MONDO:0032941":null},"xrefs":{"Monarch":{"xref_id":"0001384"}}}


id: PBO:0074467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"submaxillary gland androgen regulated protein 3A","termid":"PBO:0074467"}


id: GO:0052217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of a motile cell or organism in response to environmental oxygen on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete aerotaxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052217)","synonyms":[{"name":"aerotaxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"aerotaxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052217"}


id: PBO:0091434
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli alkA/tag double mutant","termid":"PBO:0091434"}


id: PBO:0041465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 120","termid":"PBO:0041465"}


id: PBO:0113577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RQT complex subunit ubiquitin-protein ligase E3 subunit Rqt1","termid":"PBO:0113577"}


id: PBO:0051084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy constant gamma 2 (G2m marker)","termid":"PBO:0051084"}


id: GO:0031071
data:
  {"annotated_genes":["SJAG_00186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80645],"is_not":false,"summary":null,"term":"GO:0031071"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteine + [enzyme]-cysteine = L-alanine + [enzyme]-S-sulfanylcysteine.","definition_xrefs":["EC:2.8.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cysteine desulfurase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:43892","Reactome:R-HSA-1362408","Reactome:R-HSA-947514"],"synonyms":[{"name":"IscS","type":"related"},{"name":"L-cysteine:enzyme cysteine sulfurtransferase activity","type":"related"},{"name":"NIFS","type":"related"},{"name":"SufS","type":"related"},{"name":"cysteine desulfurylase activity","type":"related"}],"termid":"GO:0031071","terms_by_termid":{"GO:0031071":null}}


id: PBO:0073905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 15 member 3","termid":"PBO:0073905"}


id: GO:1900407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to oxidative stress.","definition_xrefs":["GOC:mah","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"is_a","term_name":"regulation of response to oxidative stress","termid":"GO:1902882"},{"relation_name":"regulates","term_name":"cellular response to oxidative stress","termid":"GO:0034599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to oxidative stress","synonyms":[{"name":"regulation of adaptive response to oxidative stress","type":"narrow"}],"termid":"GO:1900407"}


id: GO:0016323
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"basal plasma membrane","termid":"GO:0009925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"basolateral plasma membrane","termid":"GO:0016323"}


id: MONDO:0032808
data:
  {"annotated_genes":["SJAG_03066"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88834],"is_not":false,"summary":null,"term":"MONDO:0032808"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"disorder of GPI anchor biosynthesis","termid":"MONDO:0024321"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"},{"relation_name":"is_a","term_name":"multiple congenital anomalies-hypotonia-seizures syndrome","termid":"MONDO:0100247"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03066":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0024322","MONDO:0005066","MONDO:0700092","MONDO:0002320","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 77","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618548","DOID:0112213","UMLS:C5231405","GARD:16363","MEDGEN:1684735"],"synonyms":[{"name":"DEE77","type":"exact"},{"name":"EIEE77","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 77","type":"exact"},{"name":"glycosylphosphatidylinositol biosynthesis defect 19","type":"related"},{"name":"multiple congenital anomalies-hypotonia-seizures syndrome 4","type":"exact"}],"termid":"MONDO:0032808","terms_by_termid":{"MONDO:0032808":null},"xrefs":{"Monarch":{"xref_id":"0032808"}}}


id: GO:0008740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-rhamnose = L-rhamnulose.","definition_xrefs":["RHEA:23160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-rhamnose isomerase activity","secondary_identifiers":["EC:5.3.1.14","MetaCyc:RHAMNISOM-RXN","KEGG_REACTION:R02437"],"synonyms":[{"name":"L-rhamnose aldose-ketose-isomerase activity","type":"related"},{"name":"L-rhamnose ketol-isomerase activity","type":"related"},{"name":"rhamnose isomerase activity","type":"related"}],"termid":"GO:0008740"}


id: PBO:0084068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase inhibitor with similarity to F-box proteins; inhibits Ypt52p GTPase activity by preventing Ypt52p from binding GTP; involved in regulating intracellular trafficking; physically interacts with Skp1p","termid":"PBO:0084068"}


id: GO:1990010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a compound eye retinal cell.","definition_xrefs":["GOC:mtg_apoptosis","PMID:12021768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal cell apoptotic process","termid":"GO:1990009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye retinal cell apoptotic process","termid":"GO:1990010"}


id: GO:0032468
data:
  {"annotated_genes":["SJAG_04096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72546],"is_not":false,"summary":null,"term":"GO:0032468"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of calcium ions within the Golgi apparatus of a cell or between the Golgi and its surroundings.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular calcium ion homeostasis","termid":"GO:0006874"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"Golgi calcium ion homeostasis","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Golgi calcium ion concentration regulation","type":"exact"},{"name":"calcium ion homeostasis in Golgi","type":"exact"},{"name":"regulation of Golgi calcium ion concentration","type":"exact"},{"name":"regulation of calcium ion concentration in Golgi","type":"exact"}],"termid":"GO:0032468","terms_by_termid":{"GO:0032468":null}}


id: PBO:0059716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 24","termid":"PBO:0059716"}


id: PBO:0116473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tdk family toxin-antidote meiotic driver","termid":"PBO:0116473"}


id: GO:0010002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"},{"relation_name":"is_a","term_name":"stem cell differentiation","termid":"GO:0048863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardioblast differentiation","synonyms":[{"name":"cardiac precursor cell differentiation","type":"exact"},{"name":"cardioblast cell differentiation","type":"exact"},{"name":"cardiomyocyte generation","type":"related"}],"termid":"GO:0010002"}


id: GO:0033800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a 7-hydroxyisoflavone = S-adenosyl-L-homocysteine + a 7-methoxyisoflavone.","definition_xrefs":["EC:2.1.1.150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"isoflavone 7-O-methyltransferase activity","secondary_identifiers":["RHEA:17933","MetaCyc:RXN-6241"],"synonyms":[{"name":"S-adenosyl-L-methionine:hydroxyisoflavone 7-O-methyltransferase activity","type":"related"}],"termid":"GO:0033800"}


id: PBO:0083703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER exit adaptor for Golgi mannosyltransferases; facilitates the exit of Kre2p, Ktr1p and Mnn4p from the ER; involved in COPII-coated vesicle cargo loading and transport; may also promote the retention of proteins in the early Golgi compartment; integral membrane protein of early Golgi and ER","termid":"PBO:0083703"}


id: GO:1902404
data:
  {"annotated_genes":["SJAG_03703","SJAG_04077","SJAG_03379","SJAG_02700","SJAG_00845","SJAG_03631","SJAG_01665","SJAG_00268","SJAG_04887","SJAG_01894","SJAG_02431","SJAG_04498","SJAG_04776","SJAG_03581","SJAG_04597","SJAG_03936"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58747,90122,97192,99564,99944,100815,102625,102856,104355,114295],"is_not":false,"summary":null,"term":"GO:1902404"},{"annotations":[105629],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903472"},{"annotations":[115355,89385,96476,96299,112503],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903473"}]},"cv_name":"biological_process","definition":"Any actomyosin contractile ring contraction that is involved in mitotic cell cycle.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin contractile ring contraction","termid":"GO:0000916"},{"relation_name":"is_a","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00268":null,"SJAG_00845":null,"SJAG_01665":null,"SJAG_01894":null,"SJAG_02431":null,"SJAG_02700":null,"SJAG_03379":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03703":null,"SJAG_03936":null,"SJAG_04077":null,"SJAG_04498":null,"SJAG_04597":null,"SJAG_04776":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0007049","GO:0030036","GO:0000281","GO:0008150"],"is_obsolete":false,"name":"mitotic actomyosin contractile ring contraction","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"mitotic actomyosin contractile ring constriction","type":"exact"}],"termid":"GO:1902404","terms_by_termid":{"GO:1902404":null,"GO:1903472":null,"GO:1903473":null}}


id: PBO:0028800
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_binding_at_mating-type_region_replication_fork_barrier","termid":"PBO:0028800"}


id: MONDO:0002450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Focal benign glandular hyperplasia in the prostate gland.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"benign neoplasm of prostate","termid":"MONDO:0021510"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostatic adenoma","secondary_identifiers":["NCIT:C4795","MEDGEN:105447","ICD9:600.20","SCTID:266569009","UMLS:C0520477","SCTID:21173002","MESH:D011470","DOID:2883"],"synonyms":[{"name":"adenoma - prostate","type":"exact"},{"name":"adenoma of prostate","type":"exact"},{"name":"adenoma of the prostate","type":"exact"},{"name":"benign adenoma of prostate","type":"exact"},{"name":"prostate adenoma","type":"exact"},{"name":"prostate gland adenoma","type":"exact"}],"termid":"MONDO:0002450","xrefs":{"Monarch":{"xref_id":"0002450"}}}


id: MONDO:0005729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with flukes of the genus Dicrocoelium.","definition_xrefs":["MESH:D004011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dicrocoeliasis","secondary_identifiers":["UMLS:C0012102","ICD9:121.8","icd11.foundation:1114361195","SCTID:105668007","MEDGEN:3813","DOID:1219"],"synonyms":[{"name":"Dicrocoelium caused disease or disorder","type":"exact"},{"name":"Dicrocoelium disease or disorder","type":"exact"},{"name":"Dicrocoelium infectious disease","type":"exact"},{"name":"disease due to Dicrocoeliidae","type":"exact"}],"termid":"MONDO:0005729","xrefs":{"Monarch":{"xref_id":"0005729"}}}


id: GO:0003083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which angiotensin directly decreases the rate of natriuresis and diuresis in the kidney.","definition_xrefs":["GOC:mtg_cardio","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of renal output by angiotensin","termid":"GO:0002019"},{"relation_name":"is_a","term_name":"positive regulation of systemic arterial blood pressure","termid":"GO:0003084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of renal output by angiotensin","synonyms":[{"name":"angiotensin mediated negative regulation of renal output","type":"exact"},{"name":"angiotensin-mediated negative regulation of renal output","type":"exact"}],"termid":"GO:0003083"}


id: MONDO:0045032
data:
  {"annotated_genes":["SJAG_03011","SJAG_02463","SJAG_01941","SJAG_00938"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87308,87309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008964"},{"annotations":[87141,87142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009635"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"secretory diarrhea","termid":"MONDO:0000249"},{"relation_name":"is_a","term_name":"congenital diarrhea","termid":"MONDO:0000824"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_01941":null,"SJAG_02463":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"congenital secretory diarrhea","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:579.8","UMLS:C0267661","MEDGEN:82757","SCTID:25898005"],"synonyms":[{"name":"congenital secretory diarrhea","type":"exact"}],"termid":"MONDO:0045032","terms_by_termid":{"MONDO:0008964":null,"MONDO:0009635":null},"xrefs":{"Monarch":{"xref_id":"0045032"}}}


id: MONDO:1012110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypoadrenocorticism, non-human animal","termid":"MONDO:1011675"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoadrenocorticism, domestic cat","secondary_identifiers":["OMIA:000519-9685"],"termid":"MONDO:1012110","xrefs":{"Monarch":{"xref_id":"1012110"}}}


id: MONDO:0014002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nocturnal frontal lobe epilepsy in which the cause of the disease is a mutation in the KCNT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sleep-related hypermotor epilepsy","termid":"MONDO:0000030"},{"relation_name":"is_a","term_name":"autosomal dominant nocturnal frontal lobe epilepsy","termid":"MONDO:0020300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"autosomal dominant nocturnal frontal lobe epilepsy 5","secondary_identifiers":["MEDGEN:767220","OMIM:615005","UMLS:C3554306","GARD:15891","DOID:0060686"],"synonyms":[{"name":"ENFL5","type":"exact"},{"name":"KCNT1 autosomal dominant nocturnal frontal lobe epilepsy","type":"exact"},{"name":"autosomal dominant nocturnal frontal lobe epilepsy caused by mutation in KCNT1","type":"exact"},{"name":"autosomal dominant nocturnal frontal lobe epilepsy type 5","type":"exact"},{"name":"epilepsy nocturnal frontal lobe, 5","type":"exact"},{"name":"epilepsy, nocturnal frontal lobe, 5","type":"related"},{"name":"epilepsy, nocturnal frontal lobe, type 5","type":"exact"},{"name":"nocturnal frontal lobe epilepsy 5","type":"exact"}],"termid":"MONDO:0014002","xrefs":{"Monarch":{"xref_id":"0014002"}}}


id: MONDO:0019067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Steroid-sensitive nephrotic syndrome (SSNS) is a kidney disease defined by selective proteinuria, hypoalbuminaemia and, on renal biopsy, minimal changes without immunoglobulin deposits.","definition_xrefs":["Orphanet:69061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic nephrotic syndrome","termid":"MONDO:0018170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"idiopathic steroid-sensitive nephrotic syndrome","secondary_identifiers":["GARD:16678"],"termid":"MONDO:0019067","xrefs":{"Monarch":{"xref_id":"0019067"}}}


id: PBO:0085415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter for both urea and polyamines; expression is highly sensitive to nitrogen catabolite repression and induced by allophanate, the last intermediate of the allantoin degradative pathway","termid":"PBO:0085415"}


id: MOD:01530
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-113 reporter+balance group.","definition_xrefs":["Unimod:730#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-113 reporter+balance reagent acylated residue","termid":"MOD:01528"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"iTRAQ8plex-113 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01530"}


id: GO:0030131
data:
  {"annotated_genes":["SJAG_02805","SJAG_04931","SJAG_01167","SJAG_00379","SJAG_00104","SJAG_00800","SJAG_01809","SJAG_04565","SJAG_04609"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[64514],"is_not":false,"summary":null,"term":"GO:0030131"},{"annotations":[62747,114986,114774,79402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030121"},{"annotations":[80046,58571,76221,110297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030122"}]},"cv_name":"cellular_component","definition":"A membrane coat adaptor complex that links clathrin to a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AP-type membrane coat adaptor complex","termid":"GO:0030119"},{"relation_name":"part_of","term_name":"clathrin coat","termid":"GO:0030118"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01809":null,"SJAG_02805":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"clathrin adaptor complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030131","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030131":null}}


id: PBO:0056631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 11","termid":"PBO:0056631"}


id: PBO:0027074
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_vegetative_cell_with_binucleate_and_anucleate_compartments","termid":"PBO:0027074"}


id: PBO:0116642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF related protein 1","termid":"PBO:0116642"}


id: MONDO:1011841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"faded shaker, non-human animal","secondary_identifiers":["OMIA:000365"],"termid":"MONDO:1011841","xrefs":{"Monarch":{"xref_id":"1011841"}}}


id: MONDO:0017853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypersensitivity pneumonitis (HP) is a pulmonary disease with symptoms of dyspnea and cough resulting from the inhalation of an antigen to which the subject has been previously sensitized.","definition_xrefs":["Orphanet:31740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic respiratory disease","termid":"MONDO:0000771"},{"relation_name":"is_a","term_name":"interstitial lung disease","termid":"MONDO:0015925"},{"relation_name":"is_a","term_name":"pneumonitis","termid":"MONDO:0043905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hypersensitivity pneumonitis","secondary_identifiers":["SCTID:37471005","ICD10CM:J67.2","DOID:841","MedDRA:10001890","ICD10CM:J67.1","ICD9:495","NCIT:C34369","MESH:D000542","NORD:761","UMLS:C0002390","ICD9:495.8","ICD9:495.9","GARD:12","MEDGEN:1446"],"synonyms":[{"name":"HP","type":"exact"},{"name":"allergic form of pneumonitis","type":"exact"},{"name":"allergic interstitial pneumonitis","type":"related"},{"name":"allergic pneumonitis","type":"exact"},{"name":"alveolitis","type":"exact"},{"name":"alveolitis, extrinsic allergic","type":"related"},{"name":"exogen allergic alveolitis","type":"exact"},{"name":"extrinsic allergic alveolitis","type":"exact"},{"name":"extrinsic allergic pneumonia hypersensitivity pneumonitis","type":"related"},{"name":"hypersensitivity pneumonitis","type":"exact"}],"termid":"MONDO:0017853","xrefs":{"Monarch":{"xref_id":"0017853"}}}


id: PBO:0029538
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores,_germinated_spores_and_tapered_cells_(obsolete_FYPO:0002184)","termid":"PBO:0029538"}


id: PBO:0063988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 22","termid":"PBO:0063988"}


id: MONDO:0000572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe combined immunodeficiency that is the result of a mutation on Chromosome 6 RAG1 gene involving genetic rearrangement of both the T- and B-lymphocyte receptor genes.","definition_xrefs":["DOID:0060011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency","termid":"MONDO:0015974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"recombinase activating gene 1 deficiency","synonyms":[{"name":"recombinase activating gene 1 deficiency","type":"exact"}],"termid":"MONDO:0000572","xrefs":{"Monarch":{"xref_id":"0000572"}}}


id: SO:0001129
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Left handed type I (dihedral angles):- Residue(i): -140 degrees < chi (1) -120 degrees < -20 degrees, -90 degrees < psi +120 degrees < +40 degrees. Residue(i+1): -140 degrees < phi < -20 degrees, -90 degrees < psi < +40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asx_turn","termid":"SO:0000912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"asx_turn_left_handed_type_one","secondary_identifiers":["BS:00206"],"synonyms":[{"name":"asx turn left handed type one","type":"exact"},{"name":"asx_turn_il","type":"related"}],"termid":"SO:0001129"}


id: GO:0002330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process leading up to expression of the pre-B cell receptor on the surface of pre-B cells, starting with the recombination of an immunuglobulin heavy chain locus, including expression of the surrogate light chain, the association of the surrogate light chain with the heavy chain, and expression of the complete pre-B cell receptor on the cell surface. pre-B cell receptor expression is a key checkpoint in the transition of pro-B cell to pre-B cell.","definition_xrefs":["GOC:add","PMID:9834086","PMID:15263090","GOC:jal","PMID:22949502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"pre-B cell differentiation","termid":"GO:0002329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pre-B cell receptor expression","termid":"GO:0002330"}


id: PBO:0068095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 402","termid":"PBO:0068095"}


id: PBO:0026672
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_plus-end_directed_mitotic_chromosome_migration","termid":"PBO:0026672"}


id: GO:1904740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A transcription from RNA polymerase II promoter that results in positive regulation of filamentous growth of a population of unicellular organisms in response to starvation.","definition_xrefs":["GOC:TermGenie","GOC:rn","GO_REF:0000063","PMID:26448198"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by transcription from RNA polymerase II promoter (obsolete GO:1904740)","synonyms":[{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by RNA polymerase II transcription factor activity","type":"related"},{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by general transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by specific transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation by transcription from Pol II promoter","type":"exact"}],"termid":"GO:1904740"}


id: PBO:0042287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD2 associated protein","termid":"PBO:0042287"}


id: MONDO:0004549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extrinsic allergic alveolitis caused by inhalation of cork dust containing the antigens produced by the fungus Penicillium glabrum. The symptoms include dyspnea, wheezing cough, fever and asthenia.","definition_xrefs":["DOID:840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal lung infectious disease","termid":"MONDO:0005766"},{"relation_name":"is_a","term_name":"hypersensitivity pneumonitis","termid":"MONDO:0017853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"cork-handlers' disease","secondary_identifiers":["UMLS:C0152108","SCTID:13394002","MEDGEN:508891","ICD9:495.3"],"synonyms":[{"name":"Suberosis","type":"exact"},{"name":"cork worker's lung","type":"exact"},{"name":"cork workers lung","type":"exact"},{"name":"cork-handlers' disease or lung","type":"exact"},{"name":"cork-handlers' lung","type":"exact"}],"termid":"MONDO:0004549","xrefs":{"Monarch":{"xref_id":"0004549"}}}


id: MONDO:0018490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cono-spondylar dysplasia is a rare genetic primary bone dysplasia disorder characterized by early-onset severe lumbar kyphosis, marked brachydactyly and irregular, pronounced cone epiphyses of the metacarpals and phalanges. Additional reported features include developmental delay, intellectual disability, hypotonia, epileptic seizures and mild facial dysmorphism (incl. long and thin or square-shaped face, slight mid-face hypoplasia, hypertelorism, epicanthic folds, low-set ears, anteverted nostrils). Radiographic findings also reveal hypoplasia of iliac wings and anterior defect of vertebral bodies.","definition_xrefs":["Orphanet:420794"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"cono-spondylar dysplasia","secondary_identifiers":["MEDGEN:1638945","SCTID:766874001","GARD:21750","UMLS:C4707860"],"synonyms":[{"name":"short stature-kyphosis-hypoplasia of basal ilia-cone epiphyses-facial dysmorphism syndrome","type":"exact"}],"termid":"MONDO:0018490","xrefs":{"Monarch":{"xref_id":"0018490"}}}


id: GO:0050887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of the type or quality of a sensation. Sensory modalities include touch, thermal sensation, visual sensation, auditory sensation and pain.","definition_xrefs":["ISBN:0721619908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory processing","termid":"GO:0050893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of sensory modality","termid":"GO:0050887"}


id: GO:0007229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to an integrin on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"integrin-mediated signaling pathway","synonyms":[{"name":"integrin-mediated signalling pathway","type":"exact"}],"termid":"GO:0007229"}


id: FYPO:0006816
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 in centromere inner repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:30652128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0003223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal histone H3-K9 acetylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"normal histone H3-K9 acetylation at centromere imr during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 acetylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 acetylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3K9 acetylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006816"}


id: GO:1990555
data:
  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90275],"is_not":false,"summary":null,"term":"GO:1990555"}]},"cv_name":"biological_process","definition":"The process in which oxaloacetate is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:10428783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxaloacetate(2-) transmembrane transport","termid":"GO:1902356"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"mitochondrial oxaloacetate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990555","terms_by_termid":{"GO:1990555":null}}


id: FYPO:0007718
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which SMN complex assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal SMN complex assembly","synonyms":[{"name":"abnormal SMN complex assembly during mitotic cell cycle","type":"related"},{"name":"abnormal SMN complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007718"}


id: PBO:0062661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily D member 2 pseudogene","termid":"PBO:0062661"}


id: PBO:0063617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2","termid":"PBO:0063617"}


id: GO:0042131
data:
  {"annotated_genes":["SJAG_04067","SJAG_01970"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112431,112432],"is_not":false,"summary":null,"term":"GO:0042131"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: thiamine phosphate + H2O = thiamine + phosphate.","definition_xrefs":["RHEA:47948","PMID:197075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"thiamine phosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.3.100"],"synonyms":[{"name":"ThMPase","type":"exact"},{"name":"thiamin monophosphate phosphatase","type":"exact"},{"name":"thiamin phosphate phosphatase activity","type":"exact"}],"termid":"GO:0042131","terms_by_termid":{"GO:0042131":null}}


id: MOD:00102
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to L-methionine amide.","definition_xrefs":["PubMed:4375977","RESID:AA0093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-methionine amide","synonyms":[{"name":"(2S)-2-amino-4-(methylsulfanyl)butanamide","type":"exact"},{"name":"2-amino-4-(methylthio)butanamide","type":"exact"},{"name":"L-methionine amide","type":"exact"},{"name":"MOD_RES Methionine amide","type":"exact"},{"name":"MetN","type":"exact"},{"name":"amidated L-methionine","type":"exact"},{"name":"methioninamide","type":"exact"}],"termid":"MOD:00102"}


id: GO:0009955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which differences in cell differentiation along the adaxial/abaxial are generated. Adaxial refers to being situated toward an axis of an anatomical structure. Abaxial refers to being situated away from an axis of an anatomical structure.","definition_xrefs":["GOC:isa_complete","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaxial/abaxial pattern specification","synonyms":[{"name":"adaxial/abaxial pattern formation","type":"related"}],"termid":"GO:0009955"}


id: FYPO:0000873
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000866"},{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation during vegetative growth","synonyms":[{"name":"increased histone H3 K9 dimethylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 dimethylation during vegetative growth","type":"exact"},{"name":"increased histone H3K9me2 during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000873"}


id: PBO:0075343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SORL1 antisense RNA 1","termid":"PBO:0075343"}


id: PBO:0075880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3GAL5 pseudogene 1","termid":"PBO:0075880"}


id: GO:0001172
data:
  {"annotated_genes":["SJAG_02070","SJAG_00119","SJAG_01436","SJAG_02101","SJAG_01313","SJAG_00458","SJAG_04894","SJAG_03356","SJAG_04030"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58110,58690,59804,60834,63282,64273,64542,64763,69481],"is_not":false,"summary":null,"term":"GO:0001172"}]},"cv_name":"biological_process","definition":"The synthesis of an RNA transcript from an RNA template.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"gene expression","termid":"GO:0010467"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00119":null,"SJAG_00458":null,"SJAG_01313":null,"SJAG_01436":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_03356":null,"SJAG_04030":null,"SJAG_04894":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"RNA-templated transcription","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"transcription, RNA-dependent","type":"exact"},{"name":"transcription, RNA-templated","type":"exact"}],"termid":"GO:0001172","terms_by_termid":{"GO:0001172":null}}


id: PBO:0088657
data:
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id: GO:0048479
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id: GO:0052897
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id: FYPO:0007520
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id: MONDO:0005570
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id: GO:0031893
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id: PBO:0069161
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 413, pseudogene","termid":"PBO:0069161"}


id: PBO:0038853
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 20","termid":"PBO:0038853"}


id: GO:1902106
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of leukocyte differentiation.","definition_xrefs":["GOC:add","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte differentiation","termid":"GO:1902105"},{"relation_name":"is_a","term_name":"negative regulation of hemopoiesis","termid":"GO:1903707"},{"relation_name":"negatively_regulates","term_name":"leukocyte differentiation","termid":"GO:0002521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte differentiation","synonyms":[{"name":"down regulation of immune cell differentiation","type":"exact"},{"name":"down regulation of leucocyte differentiation","type":"exact"},{"name":"down regulation of leukocyte differentiation","type":"exact"},{"name":"down-regulation of immune cell differentiation","type":"exact"},{"name":"down-regulation of leucocyte differentiation","type":"exact"},{"name":"down-regulation of leukocyte differentiation","type":"exact"},{"name":"downregulation of immune cell differentiation","type":"exact"},{"name":"downregulation of leucocyte differentiation","type":"exact"},{"name":"downregulation of leukocyte differentiation","type":"exact"},{"name":"inhibition of immune cell differentiation","type":"narrow"},{"name":"inhibition of leucocyte differentiation","type":"narrow"},{"name":"inhibition of leukocyte differentiation","type":"narrow"},{"name":"negative regulation of immune cell differentiation","type":"exact"},{"name":"negative regulation of leucocyte differentiation","type":"exact"}],"termid":"GO:1902106"}


id: MONDO:0971174
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id: GO:0010572
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id: PBO:0085869
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id: MONDO:0005316
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection caused by bacterial overgrowth in the vagina. Most affected women are asymptomatic. When symptoms occur, they include foul-smelling vaginal discharge, vaginal itching, and burning. Risk factors include sexual activity with multiple partners and the use of vaginal douches and intrauterine devices. Up to a third of cases resolve without treatment. Antibiotic treatment is recommended when symptoms are present and for women that are pregnant at the time of infection.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bifidobacteriales infectious disease","termid":"MONDO:0006706"},{"relation_name":"is_a","term_name":"infective vaginitis","termid":"MONDO:0023557"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial vaginosis","secondary_identifiers":["DOID:3385","MEDGEN:43118","EFO:0003932","icd11.foundation:63323819","UMLS:C0085166","NCIT:C116973","MESH:D016585","SCTID:419760006"],"synonyms":[{"name":"BV","type":"broad"}],"termid":"MONDO:0005316","xrefs":{"Monarch":{"xref_id":"0005316"}}}


id: MONDO:0002385
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign encapsulated neoplasm of the kidney, characterized by the presence of cysts separated by septa. There are no solid areas present. The septa are lined by one layer of epithelial cells that have eosinophilic or clear cytoplasm. The cystic spaces contain serous or hemorrhagic fluid.","definition_xrefs":["NCIT:C7504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney benign neoplasm","termid":"MONDO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"benign cystic nephroma","secondary_identifiers":["DOID:2673","UMLS:C1266138","MEDGEN:220422","ICDO:8959/0"],"synonyms":[{"name":"benign cystic nephroma","type":"exact"},{"name":"benign multilocular cystic nephroma","type":"exact"},{"name":"cystic nephroma","type":"exact"}],"termid":"MONDO:0002385","xrefs":{"Monarch":{"xref_id":"0002385"}}}


id: PR:000027564
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A-alpha phosphorylated 1 in Schizosaccharomyces pombe. Phosphorylation motif is SQE. Example: UniProtKB:P04909-1, Ser-129, MOD:00046.","definition_xrefs":["PMID:15226425","PMID:21516229","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A-alpha (Schizosaccharomyces pombe 972h-)","termid":"PR:P04909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hta1/Phos(S128)","pombase_gene_id":"SPCC622.08c","synonyms":[{"name":"PomBase_original_PRO_term_name: histone H2A-alpha phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hta1/Phos:1","type":"exact"},{"name":"gamma-H2A (Schizosaccharomyces pombe)","type":"related"},{"name":"histone H2A.1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"hta1/Phos(S128)","type":"exact"},{"name":"hta1/Phos:(S129)","type":"exact"}],"termid":"PR:000027564"}


id: MONDO:0003416
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemoglobin E disease (obsolete MONDO:0003416)","termid":"MONDO:0003416","xrefs":{"Monarch":{"xref_id":"0003416"}}}


id: GO:0045834
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id: PBO:0064963
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id: SO:0000584
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id: PBO:0075089
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 139","termid":"PBO:0075089"}


id: MONDO:0022316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syndrome with the association of stubby, coarse, sparse and fragile hair, eyebrows and eyelashes with photosensitivity and nonprogressive intellectual deficit, without a demonstrable metabolic aberration. It has been described in three sisters born to consanguineous parents.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic hair shaft abnormality (obsolete MONDO:0019282)","termid":"MONDO:0019282"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"hair defect with photosensitivity and intellectual disability syndrome","secondary_identifiers":["SCTID:721007005","MESH:C537628","OMIM:234030","MEDGEN:383868","UMLS:C1856241","Orphanet:1408"],"synonyms":[{"name":"Calderon Gonzalez-Cantu syndrome","type":"exact"},{"name":"Calderón-González-Cantu syndrome","type":"exact"},{"name":"hair defect with photosensitivity and intellectual disability","type":"related"},{"name":"hair defect with photosensitivity and intellectual disability syndrome","type":"exact"},{"name":"hair defect with photosensitivity and mental retardation","type":"related"},{"name":"hair defect-photosensitivity-intellectual disability syndrome","type":"exact"},{"name":"kinky hair, photosensitivity, broken eyebrows and eyelashes, and nonprogressive intellectual disability","type":"related"},{"name":"kinky hair, photosensitivity, broken eyebrows and eyelashes, and nonprogressive mental retardation","type":"related"}],"termid":"MONDO:0022316","xrefs":{"Monarch":{"xref_id":"0022316"}}}


id: GO:1905921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of acetylcholine biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:bc","PMID:20164328","GOC:aruk","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of acetylcholine metabolic process","termid":"GO:0060408"},{"relation_name":"regulates","term_name":"acetylcholine biosynthetic process","termid":"GO:0008292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of acetylcholine biosynthetic process","synonyms":[{"name":"regulation of acetylcholine anabolism","type":"exact"},{"name":"regulation of acetylcholine biosynthesis","type":"exact"},{"name":"regulation of acetylcholine formation","type":"exact"},{"name":"regulation of acetylcholine synthesis","type":"exact"}],"termid":"GO:1905921"}


id: GO:0086065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates interactions between a cell and its surroundings that contributes to the process of cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"part_of","term_name":"cardiac conduction","termid":"GO:0061337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell communication involved in cardiac conduction","termid":"GO:0086065"}


id: GO:0035370
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A heterodimeric ubiquitin conjugating enzyme complex that catalyzes assembly of K63-linked polyubiquitin chains and is involved in NF-kappaB activation. In humans at least, the complex comprises the ubiquitin-conjugating enzyme UBC13 and ubiquitin-conjugating enzyme variant 1A (UEV1A).","definition_xrefs":["PMID:16129784","GOC:amm"],"gene_count":0,"genotype_count":0,"name":"obsolete UBC13-UEV1A complex (obsolete GO:0035370)","termid":"GO:0035370"}


id: PBO:0064993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRCP pseudogene 1","termid":"PBO:0064993"}


id: MONDO:0003701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of papillary carcinoma of the thyroid gland that more often affects young patients and commonly metastasizing to the lungs. It is characterized by a diffuse infiltration of the thyroid gland by malignant follicular cells, squamous metaplasia, stromal fibrosis, and lymphocytic infiltration.","definition_xrefs":["NCIT:C7427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland papillary carcinoma","termid":"MONDO:0005075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid gland diffuse sclerosing papillary carcinoma","secondary_identifiers":["UMLS:C0334330","ICDO:8350/3","DOID:5914","MEDGEN:87218"],"synonyms":[{"name":"nonencapsulated sclerosing adenocarcinoma","type":"exact"},{"name":"nonencapsulated sclerosing carcinoma","type":"exact"},{"name":"nonencapsulated sclerosing neoplasm","type":"exact"},{"name":"nonencapsulated sclerosing papillary thyroid carcinoma","type":"exact"},{"name":"nonencapsulated sclerosing tumor","type":"exact"},{"name":"nonencapsulated sclerosing tumour","type":"exact"},{"name":"papillary carcinoma, diffuse sclerosing","type":"exact"},{"name":"thyroid gland diffuse sclerosing papillary carcinoma","type":"exact"}],"termid":"MONDO:0003701","xrefs":{"Monarch":{"xref_id":"0003701"}}}


id: PBO:0029813
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actin_cortical_patch_localization_during_mitotic_interphase","termid":"PBO:0029813"}


id: PBO:0079873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF3A regulator of nonsense mediated mRNA decay","termid":"PBO:0079873"}


id: PBO:0075410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPACA6 antisense RNA 1","termid":"PBO:0075410"}


id: PBO:0087476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of both the ERMES and the SAM complex; component of ERMES complex which acts as a molecular tether between the mitochondria and the ER, necessary for efficient phospholipid exchange between organelles and for mitophagy; SAM/TOB complex component that functions in the assembly of outer membrane beta-barrel proteins; involved in mitochondrial inheritance and morphology; ERMES complex is often co-localized with peroxisomes and concentrated areas of pyruvate dehydrogenase","termid":"PBO:0087476"}


id: MONDO:0004231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the breast parenchyma and is characterized by the presence of spindle-shaped malignant cells.","definition_xrefs":["NCIT:C40358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell breast carcinoma","termid":"MONDO:0006056"},{"relation_name":"is_a","term_name":"sarcomatoid squamous cell carcinoma","termid":"MONDO:0021663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"spindle cell variant squamous cell breast carcinoma","secondary_identifiers":["DOID:7460","MEDGEN:274270","ONCOTREE:MASCC","UMLS:C1519487"],"synonyms":[{"name":"metaplastic adenocarcinoma with spindle cell differentiation","type":"related"},{"name":"squamous cell breast carcinoma, spindle cell variant","type":"exact"}],"termid":"MONDO:0004231","xrefs":{"Monarch":{"xref_id":"0004231"}}}


id: GO:1901185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ERBB signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of ERBB signaling pathway","termid":"GO:1901184"},{"relation_name":"negatively_regulates","term_name":"ERBB signaling pathway","termid":"GO:0038127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ERBB signaling pathway","synonyms":[{"name":"down regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"down regulation of EGFR family signaling pathway","type":"related"},{"name":"down regulation of ERBB signaling pathway","type":"exact"},{"name":"down regulation of ERBB signalling pathway","type":"exact"},{"name":"down regulation of ErbB signaling","type":"exact"},{"name":"down-regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"down-regulation of EGFR family signaling pathway","type":"related"},{"name":"down-regulation of ERBB signaling pathway","type":"exact"},{"name":"down-regulation of ERBB signalling pathway","type":"exact"},{"name":"down-regulation of ErbB signaling","type":"exact"},{"name":"downregulation of EGF receptor family signaling pathway","type":"exact"},{"name":"downregulation of EGFR family signaling pathway","type":"related"},{"name":"downregulation of ERBB signaling pathway","type":"exact"},{"name":"downregulation of ERBB signalling pathway","type":"exact"},{"name":"downregulation of ErbB signaling","type":"exact"},{"name":"inhibition of EGF receptor family signaling pathway","type":"exact"},{"name":"inhibition of EGFR family signaling pathway","type":"related"},{"name":"inhibition of ERBB signaling pathway","type":"narrow"},{"name":"inhibition of ERBB signalling pathway","type":"exact"},{"name":"inhibition of ErbB signaling","type":"exact"},{"name":"negative regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"negative regulation of EGFR family signaling pathway","type":"related"},{"name":"negative regulation of ERBB signalling pathway","type":"exact"},{"name":"negative regulation of ErbB signaling","type":"exact"}],"termid":"GO:1901185"}


id: MONDO:1012311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"motor neuron disease, non-human animal","termid":"MONDO:1011868"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motor neuron disease, dog","secondary_identifiers":["OMIA:001165-9615"],"termid":"MONDO:1012311","xrefs":{"Monarch":{"xref_id":"1012311"}}}


id: PBO:0052253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCTD21 antisense RNA 1","termid":"PBO:0052253"}


id: MONDO:0004722
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Wiskott-Aldrich syndrome (obsolete MONDO:0004722)","termid":"MONDO:0004722","xrefs":{"Monarch":{"xref_id":"0004722"}}}


id: PBO:0028493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-nucleus_mislocalized_towards_cell_tip_during_mitotic_interphase","termid":"PBO:0028493"}


id: PBO:0047883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(5)(q15)","termid":"PBO:0047883"}


id: GO:1900490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of hydroxymethylglutaryl-CoA reductase (NADPH) activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity (obsolete GO:1900490)","synonyms":[{"name":"activation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase activity","type":"broad"},{"name":"activation of HMG-CoA reductase activity","type":"broad"},{"name":"activation of hydroxymethylglutaryl-CoA reductase (NADPH) activity","type":"narrow"},{"name":"positive regulation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase activity","type":"broad"},{"name":"positive regulation of HMG-CoA reductase activity","type":"broad"},{"name":"up regulation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase activity","type":"broad"},{"name":"up regulation of HMG-CoA reductase activity","type":"broad"},{"name":"up regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity","type":"exact"},{"name":"up-regulation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase activity","type":"broad"},{"name":"up-regulation of HMG-CoA reductase activity","type":"broad"},{"name":"up-regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity","type":"exact"},{"name":"upregulation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase activity","type":"broad"},{"name":"upregulation of HMG-CoA reductase activity","type":"broad"},{"name":"upregulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity","type":"exact"}],"termid":"GO:1900490"}


id: MONDO:0015039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lissencephaly with cerebellar hypoplasia type F (LCHf) is a severe form of lissencephaly with cerebellar hypoplasia, characterized by a microcephaly of at least - 3 SD and a thick cortex associated with complete absence of the corpus callosum.","definition_xrefs":["Orphanet:100016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly with cerebellar hypoplasia","termid":"MONDO:0019450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly with cerebellar hypoplasia type F","secondary_identifiers":["MEDGEN:902647","icd11.foundation:468664200","GARD:19736","UMLS:C4274989","SCTID:715822007"],"termid":"MONDO:0015039","xrefs":{"Monarch":{"xref_id":"0015039"}}}


id: MOD:00664
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue L-enantiomer (stereoisomer) with a D-enantiomer or with a different diastereomeric isomer.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stereoisomerized residue","synonyms":[{"name":"D-Res","type":"exact"}],"termid":"MOD:00664"}


id: GO:0032254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a secretory granule to a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of vesicle localization","termid":"GO:0051650"},{"relation_name":"part_of","term_name":"secretory granule localization","termid":"GO:0032252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of secretory granule localization","synonyms":[{"name":"establishment of secretory granule localisation","type":"exact"}],"termid":"GO:0032254"}


id: PBO:0064713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 49","termid":"PBO:0064713"}


id: GO:0051619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the activation of the directed movement of histamine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibition of neurotransmitter uptake","termid":"GO:0051609"},{"relation_name":"is_a","term_name":"negative regulation of histamine uptake","termid":"GO:0051617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"inhibition of histamine uptake","synonyms":[{"name":"inhibition of histamine import","type":"exact"}],"termid":"GO:0051619"}


id: PBO:0069421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 684, pseudogene","termid":"PBO:0069421"}


id: PBO:0057782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2909","termid":"PBO:0057782"}


id: GO:0018979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving trichloroethylene, a toxic, colorless, photoreactive, chlorinated hydrocarbon liquid, commonly used as a metal degreaser and solvent.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated hydrocarbon metabolic process","termid":"GO:0042196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichloroethylene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:tce"],"synonyms":[{"name":"TCE metabolic process","type":"exact"},{"name":"TCE metabolism","type":"exact"},{"name":"trichloroethene metabolic process","type":"exact"},{"name":"trichloroethene metabolism","type":"exact"},{"name":"trichloroethylene metabolism","type":"exact"}],"termid":"GO:0018979"}


id: FYECO:0000236
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing maltose as the carbon source, yeast extract and other components.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maltose YE","synonyms":[{"name":"maltose rich medium","type":"broad"}],"termid":"FYECO:0000236"}


id: GO:1904536
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904537"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic telomere tethering at nuclear periphery.","definition_xrefs":["GOC:TermGenie","PMID:22959349","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"mitotic telomere tethering at nuclear periphery","termid":"GO:0044820"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic telomere tethering at nuclear periphery","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1904536","terms_by_termid":{"GO:1904537":null}}


id: PBO:0076607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 26","termid":"PBO:0076607"}


id: PBO:0082820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved NADPH oxidoreductase containing flavin mononucleotide (FMN); responsible for geraniol reduction into citronellol during fermentation; homologous to Oye3p with different ligand binding and catalytic properties; may be involved in sterol metabolism, oxidative stress response, and programmed cell death; protein abundance increases in response to DNA replication stress","termid":"PBO:0082820"}


id: GO:0019345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cysteine, via the intermediate S-sulfo-L-cysteine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine biosynthetic process","termid":"GO:0019344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cysteine biosynthetic process via S-sulfo-L-cysteine","synonyms":[{"name":"cysteine anabolism via S-sulfo-L-cysteine","type":"exact"},{"name":"cysteine biosynthesis via S-sulpho-L-cysteine","type":"exact"},{"name":"cysteine biosynthetic process via S-sulpho-L-cysteine","type":"exact"},{"name":"cysteine formation via S-sulfo-L-cysteine","type":"exact"},{"name":"cysteine synthesis via S-sulfo-L-cysteine","type":"exact"}],"termid":"GO:0019345"}


id: FYPO:0002964
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to  nuclear exosome foci is increased. Nuclear exosome foci, also called Mmi1 foci, are small structures that form within the nucleus, and contain proteins involved in degrading meiosis-specific RNAs during the mitotic cell cycle, such as Mmi1, Iss10, and Red1.","definition_xrefs":["PMID:23980030","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nuclear exosome focus","termid":"FYPO:0002963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to nuclear exosome focus","synonyms":[{"name":"increased protein localisation to nuclear exosome focus","type":"exact"},{"name":"increased protein localization to Mmi1 focus","type":"exact"},{"name":"increased protein localization to Mmi1 nuclear focus","type":"exact"},{"name":"increased protein localization to nuclear exosome foci","type":"exact"},{"name":"increased protein localization to nuclear exosome focus during mitotic cell cycle","type":"related"},{"name":"increased protein localization to nuclear exosome focus during vegetative growth","type":"exact"}],"termid":"FYPO:0002964"}


id: PBO:0084406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysophosphatidic acid acyltransferase; responsible for enhanced phospholipid synthesis during organic solvent stress; null displays increased sensitivity to Calcofluor white; highly expressed during organic solvent stress; ICT1 has a paralog, ECM18, that arose from the whole genome duplication; human ABHD5 can complement ict1 null mutant","termid":"PBO:0084406"}


id: GO:0071592
data:
  {"annotated_genes":["SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71668],"is_not":false,"summary":null,"term":"GO:0071592"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinic acid riboside, the product of the formation of a glycosidic bond between ribose and nicotinic acid.","definition_xrefs":["GOC:mah","PMID:19846558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine nucleoside biosynthetic process","termid":"GO:0071589"},{"relation_name":"is_a","term_name":"nicotinic acid riboside metabolic process","termid":"GO:0071591"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"nicotinic acid riboside biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"D-ribosylnicotinic acid biosynthetic process","type":"exact"},{"name":"nicotinic acid riboside anabolism","type":"exact"},{"name":"nicotinic acid riboside biosynthesis","type":"exact"},{"name":"nicotinic acid riboside formation","type":"exact"},{"name":"nicotinic acid riboside synthesis","type":"exact"}],"termid":"GO:0071592","terms_by_termid":{"GO:0071592":null}}


id: PBO:0063912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha","termid":"PBO:0063912"}


id: MONDO:0024417
data:
  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id: PBO:0076368
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id: PBO:0058038
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id: GO:0005179
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects; all bind receptors and trigger some biological process.","definition_xrefs":["ISBN:0198506732","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0005488","GO:0140677","GO:0005515"],"is_obsolete":false,"name":"hormone activity","synonyms":[{"name":"cAMP generating peptide activity","type":"narrow"},{"name":"glycopeptide hormone","type":"narrow"},{"name":"lipopeptide hormone","type":"narrow"},{"name":"peptide hormone","type":"narrow"}],"termid":"GO:0005179"}


id: GO:1990359
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  {"annotated_genes":["SJAG_01078","SJAG_01803"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95652,95651],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010312"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis caused by a zinc ion stimulus.","definition_xrefs":["GOC:kmv","PMID:17888400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to zinc ion","termid":"GO:0010043"},{"relation_name":"is_a","term_name":"stress response to metal ion","termid":"GO:0097501"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01078":null,"SJAG_01803":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stress response to zinc ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to zinc ion stress","type":"exact"},{"name":"response to zinc toxicity","type":"related"},{"name":"stress response to zinc","type":"broad"}],"termid":"GO:1990359","terms_by_termid":{"GO:0010312":null}}


id: PBO:0083489
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YBR278W","termid":"PBO:0083489"}


id: PBO:0054136
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1502","termid":"PBO:0054136"}


id: PBO:0088554
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidic acid transfer protein Ups2","termid":"PBO:0088554"}


id: PBO:0052028
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JPT1 pseudogene 1","termid":"PBO:0052028"}


id: PBO:0083776
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential nuclear protein; required for biogenesis of the small ribosomal subunit; has a possible role in the osmoregulatory glycerol response; putative homolog of human NOM1 which is implicated in acute myeloid leukemia","termid":"PBO:0083776"}


id: GO:0061242
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a mesonephric nephron tubule over time, from its initial formation to the mature structure. A mesonephric nephron tubule is an epithelial tube that is part of the mesonephric nephron, the functional part of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric nephron epithelium development","termid":"GO:0061241"},{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"},{"relation_name":"is_a","term_name":"mesonephric tubule development","termid":"GO:0072164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric nephron tubule development","termid":"GO:0061242"}


id: PBO:0046490
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythroferrone","termid":"PBO:0046490"}


id: MONDO:1040024
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A demyelinating disease of the central nervous system characterized by the presence of a demyelinating event (optic neuritis, myelitis, acute/multiphasic encephalomyelitis, cerebral or polyfocal deficits, brainstem or cerebellar deficits, and/or cerebral cortical encephalitis), a positive myelin oligodendrocyte glycorotein-IgG test, and exclusion of an alternative diagnosis like MS.","definition_xrefs":["PMID:37789888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demyelinating disease of central nervous system","termid":"MONDO:0020800"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"myelin oligodendrocyte glycoprotein antibody-associated disease","secondary_identifiers":["MEDGEN:1813985","UMLS:C5554054"],"termid":"MONDO:1040024","xrefs":{"Monarch":{"xref_id":"1040024"}}}


id: SO:0000832
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence which is part of a promoter.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000832 promoter_region (obsolete SO:0000832)","termid":"SO:0000832"}


id: GO:0030673
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding an axon; it is a specialized trilaminar random mosaic of protein molecules floating within a fluid matrix of highly mobile phospholipid molecules, 7-8 nm in thickness.","definition_xrefs":["PMID:9527135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection membrane","termid":"GO:0032589"},{"relation_name":"part_of","term_name":"main axon","termid":"GO:0044304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"axolemma","secondary_identifiers":["NIF_Subcellular:sao250772229","Wikipedia:Axolemma"],"synonyms":[{"name":"axonal membrane","type":"exact"}],"termid":"GO:0030673"}


id: GO:0042715
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of proteins on DNA to form the complex that mediates dosage compensation on both X chromosomes in the monogametic sex, ultimately resulting in a two-fold reduction in transcription from these chromosomes. An example of this process is found in Caenorhabditis elegans.","definition_xrefs":["PMID:11102361","PMID:12672493","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete dosage compensation complex assembly involved in dosage compensation by hypoactivation of X chromosome (obsolete GO:0042715)","synonyms":[{"name":"dosage compensation complex assembly during dosage compensation by hypoactivation of X chromosome","type":"related"}],"termid":"GO:0042715"}


id: MONDO:0100521
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant condition caused by pathogenic variants of the NOG gene, encoding the noggin protein. Five overlapping clinical syndromes associated with NOG mutations have been described; proximal symphalangism, multiple synostoses syndrome 1, tarsal-carpal coalition syndrome, stapes ankylosis with broad thumbs and toes, and brachydactyly type B2. NOG-related symphalangism spectrum disorder is a new term initially proposed by Potti et al., 2011 to encompass these disorders. NOG-SSD is characterized by proximal symphalangism, conductive deafness caused by stapes ankylosis, ocular abnormality such as hyperopia and strabismus, and characteristic facial features including a broad, tubular-shaped nose and a thin upper vermilion.","definition_xrefs":["PMID:21538686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symphalangism","termid":"MONDO:0000151"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"NOG-related symphalangism spectrum disorder","synonyms":[{"name":"NOG-SSD","type":"exact"}],"termid":"MONDO:0100521","xrefs":{"Monarch":{"xref_id":"0100521"}}}


id: GO:0031778
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 melanin-concentrating hormone receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanin-concentrating hormone receptor binding","termid":"GO:0031776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 2 melanin-concentrating hormone receptor binding","synonyms":[{"name":"type 2 melanin-concentrating hormone receptor ligand","type":"narrow"}],"termid":"GO:0031778"}


id: PBO:0058137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4435-2 host gene","termid":"PBO:0058137"}


id: PBO:0074582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 2A","termid":"PBO:0074582"}


id: PBO:0056818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 11","termid":"PBO:0056818"}


id: PBO:0070008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1305, pseudogene","termid":"PBO:0070008"}


id: PBO:0046334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENOX2 antisense RNA 1","termid":"PBO:0046334"}


id: GO:2001283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any Roundabout signaling pathway that is involved in the directed movement of a muscle cell towards a tendon cell in response to an external stimulus.","definition_xrefs":["GOC:obol","GOC:bf","PMID:19793885","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Roundabout signaling pathway","termid":"GO:0035385"},{"relation_name":"part_of","term_name":"muscle cell chemotaxis toward tendon cell","termid":"GO:0036061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Roundabout signaling pathway involved in muscle cell chemotaxis toward tendon cell","synonyms":[{"name":"ROBO signaling pathway involved in muscle cell attraction","type":"related"},{"name":"ROBO signaling pathway involved in muscle cell chemotaxis toward tendon cell","type":"exact"},{"name":"ROBO signaling pathway involved in muscle cell chemotaxis towards tendon cell","type":"exact"},{"name":"ROBO/SLIT signaling pathway involved in muscle cell attraction","type":"related"},{"name":"ROBO/SLIT signaling pathway involved in muscle cell chemotaxis toward tendon cell","type":"exact"},{"name":"ROBO/SLIT signaling pathway involved in muscle cell chemotaxis towards tendon cell","type":"exact"},{"name":"Roundabout signaling pathway involved in muscle cell attraction","type":"related"},{"name":"Roundabout signaling pathway involved in muscle cell chemotaxis towards tendon cell","type":"exact"},{"name":"Roundabout signalling pathway involved in muscle cell attraction","type":"related"},{"name":"Roundabout signalling pathway involved in muscle cell chemotaxis toward tendon cell","type":"exact"},{"name":"Roundabout signalling pathway involved in muscle cell chemotaxis towards tendon cell","type":"exact"}],"termid":"GO:2001283"}


id: MONDO:0002005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acrodysostosis (obsolete MONDO:0002005)","termid":"MONDO:0002005","xrefs":{"Monarch":{"xref_id":"0002005"}}}


id: GO:0070073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which voltage-gated calcium channels become localized together in high densities.","definition_xrefs":["PMID:18385325","GOC:sart","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ion channel clustering","termid":"GO:0045161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"clustering of voltage-gated calcium channels","synonyms":[{"name":"clustering of voltage gated calcium channels","type":"exact"},{"name":"clustering of voltage-dependent calcium channels","type":"exact"},{"name":"voltage-gated calcium channel clustering","type":"exact"}],"termid":"GO:0070073"}


id: PBO:0091600
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cor-C? is nse6","termid":"PBO:0091600"}


id: PBO:0065060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl endopeptidase like","termid":"PBO:0065060"}


id: MONDO:0012454
data:
  {"annotated_genes":["SJAG_03786"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87011],"is_not":false,"summary":null,"term":"MONDO:0012454"}]},"cv_name":"mondo","definition":"Alcohol intolerance is characterized by immediate unpleasant reactions after drinking alcohol. The most common signs and symptoms of alcohol intolerance are stuffy nose and skin flushing. Alcohol intolerance is caused by a genetic condition in which the body is unable to break down alcohol efficiently, usually found in Asians. These individuals accumulate acetaldehyde, the primary metabolite of ethanol, because of a genetic polymorphism of aldehyde dehydrogenase (ALDH) that metabolizes acetaldehyde to nontoxic acetate. The only way to prevent alcohol intolerance reactions is to avoid alcohol. Alcohol intolerance isn't an allergy. However, in some cases, what seems to be alcohol intolerance may be a reaction to something in an alcoholic beverage, such as chemicals, grains or preservatives. Combining alcohol with certain medications also can cause reactions. In rare instances, an unpleasant reaction to alcohol can be a sign of a serious underlying health problem that requires diagnosis and treatment.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"alcohol-related disorders","termid":"MONDO:0021698"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03786":null},"genotype_count":0,"is_obsolete":false,"name":"alcohol sensitivity, acute","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2674838","MEDGEN:390639","OMIM:610251"],"synonyms":[{"name":"Hangover, susceptibility to","type":"related"},{"name":"acute alcohol sensitivity","type":"related"},{"name":"alcohol intolerance","type":"related"},{"name":"alcohol sensitivity, acute","type":"exact"}],"termid":"MONDO:0012454","terms_by_termid":{"MONDO:0012454":null},"xrefs":{"Monarch":{"xref_id":"0012454"}}}


id: PBO:0016938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sSchizosaccharomyces specific protein","termid":"PBO:0016938"}


id: GO:0051902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the change in the membrane potential of the mitochondria from negative to positive.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial depolarization","termid":"GO:0051900"},{"relation_name":"is_a","term_name":"negative regulation of membrane depolarization","termid":"GO:1904180"},{"relation_name":"negatively_regulates","term_name":"mitochondrial depolarization","termid":"GO:0051882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial depolarization","synonyms":[{"name":"down regulation of mitochondrial depolarization","type":"exact"},{"name":"down-regulation of mitochondrial depolarization","type":"exact"},{"name":"downregulation of mitochondrial depolarization","type":"exact"},{"name":"inhibition of mitochondrial depolarization","type":"narrow"}],"termid":"GO:0051902"}


id: PBO:0085434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyamine transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; specific for spermine; localizes to the plasma membrane; transcription of TPO2 is regulated by Haa1p; TPO2 has a paralog, TPO3, that arose from the whole genome duplication","termid":"PBO:0085434"}


id: MONDO:0100184
data:
  {"annotated_genes":["SJAG_03275"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007495"},{"annotations":[87246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100186"}]},"cv_name":"mondo","definition":"A disease characterized by a deficiency in GTP cyclohydrolase I, which leads to a consequent reduction in BH4 and reduces the activity of three BH4-cofactor dependent enzymes - phenylalanine hydroxylase, tyrosine hydroxylase, and tryptophan hydroxylase. GTP cyclohydrolase I deficiency encompasses a spectrum of disease that includes autosomal dominant and autosomal recessive forms, with severity correlating with the residual enzyme activity. Individuals who are heterozygous for pathogenic variants in GCH1 have symptoms ranging from none (due to reduced penetrance) to dopa-responsive dystonia, which is the most common presentation in symptomatic cases, to rarer neurological presentations such as adult-onset \\\"benign\\\" parkinsonism, various types of focal dystonia, and symptoms simulating cerebral palsy or spastic paraplegia. Hyperphenylalaninemia is absent, and patients respond well to treatment with levodopa. Individuals who are homozygous or compound heterozygous for pathogenic variants in GCH1 typically present with hyperphenylalaninemia, often identified by newborn screening, and severe neurological features and due to very low or undetectable enzyme activity. Treatment with levodopa, BH4, and 5-hydroxytryptophan can improve the symptoms but does not prevent development of severe encephalopathy. Rare cases of GTP cyclohydrolase I deficiency with a phenotype that is intermediate in severity between dopa-responsive dystonia and the severe autosomal recessive form have also been described, supporting the existence a phenotypic spectrum of disease.","definition_xrefs":["PMID:22729819","PMID:18044725","PMID:20842687","PMID:20818608","PMID:18276179","PMID:29471552","PMID:9667588","PMID:19332422","PMID:9566389","PMID:19234759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrahydrobiopterin metabolic process disease","termid":"MONDO:0045014"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03275":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"GTP cyclohydrolase I deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0268467","MEDGEN:75683"],"synonyms":[{"name":"GTP cyclohydrolase I deficiency","type":"exact"},{"name":"GTP-cyclohydrolase I deficiency","type":"exact"}],"termid":"MONDO:0100184","terms_by_termid":{"MONDO:0007495":null,"MONDO:0100186":null},"xrefs":{"Monarch":{"xref_id":"0100184"}}}


id: MONDO:0017430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic congenital joint dislocations (obsolete MONDO:0017430)","secondary_identifiers":["Orphanet:294951"],"synonyms":[{"name":"congenital joint dislocations","type":"related"}],"termid":"MONDO:0017430","xrefs":{"Monarch":{"xref_id":"0017430"}}}


id: GO:0044818
data:
  {"annotated_genes":["SJAG_04287","SJAG_02563","SJAG_00364","SJAG_05373","SJAG_02576","SJAG_01146","SJAG_03942","SJAG_00640","SJAG_03160","SJAG_01076","SJAG_03695","SJAG_02266","SJAG_02098","SJAG_01010","SJAG_04671","SJAG_03927","SJAG_01873","SJAG_02074","SJAG_01680","SJAG_01429","SJAG_02771","SJAG_01605","SJAG_01044","SJAG_01205","SJAG_03026"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74091,119287,102463,81307,72875,93310,114021,118810,101273,118062,80715,101106,108574,76666,95847,119115,111290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[93311,67814,90989,101275,74093,111291,62305,61476,108575,119028,77022,81180,113715,102977,60765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"}]},"cv_name":"biological_process","definition":"A cell cycle checkpoint that detects and negatively regulates progression from G2 to M phase as part of a mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"},{"relation_name":"is_a","term_name":"negative regulation of G2/M transition of mitotic cell cycle","termid":"GO:0010972"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00640":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_01873":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03160":null,"SJAG_03695":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04287":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0044772","GO:0008150"],"is_obsolete":false,"name":"mitotic G2/M transition checkpoint","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0044818","terms_by_termid":{"GO:0007095":null,"GO:0033314":null}}


id: GO:0031883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a taste receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"taste receptor binding","synonyms":[{"name":"taste receptor ligand","type":"narrow"}],"termid":"GO:0031883"}


id: PBO:0042654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 3","termid":"PBO:0042654"}


id: PBO:0048150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYN binding protein 2","termid":"PBO:0048150"}


id: PBO:0027651
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_phosphatidylcholine_level","termid":"PBO:0027651"}


id: PBO:0068872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 112, pseudogene","termid":"PBO:0068872"}


id: GO:1903541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of exosomal secretion.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24105262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exocytosis","termid":"GO:0017157"},{"relation_name":"regulates","term_name":"exosomal secretion","termid":"GO:1990182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of exosomal secretion","synonyms":[{"name":"regulation of exosomal protein secretion","type":"narrow"},{"name":"regulation of exosomal secretory pathway","type":"exact"},{"name":"regulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"regulation of secretion of exosome","type":"exact"}],"termid":"GO:1903541"}


id: MONDO:0013390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive limb-girdle muscular dystrophy type 2Q (LGMD2Q) is a form of limb-girdle muscular dystrophy characterized by proximal muscle weakness presenting in early childhood (with occasional falls and difficulties in climbing stairs) and a progressive course resulting in loss of ambulation in early adulthood. Muscle atrophy and multiple contractures have also been reported in rare cases.","definition_xrefs":["Orphanet:254361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of plectin","termid":"MONDO:0016198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005336"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2Q","secondary_identifiers":["GARD:12542","UMLS:C3150989","MEDGEN:462339","DOID:0110285","OMIM:613723"],"synonyms":[{"name":"LGMD2Q","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy due to plectin deficiency","type":"exact"},{"name":"limb-girdle muscular dystrophy type 2Q","type":"related"},{"name":"muscular dystrophy, limb-girdle, autosomal recessive 17","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2Q","type":"exact"}],"termid":"MONDO:0013390","xrefs":{"Monarch":{"xref_id":"0013390"}}}


id: PBO:0044207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin L pseudogene 6","termid":"PBO:0044207"}


id: GO:0031395
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A neuropeptide hormone secreted by the central nervous system of insects that stimulates the tanning and sclerotization of the adult cuticle following eclosion. The active hormone consists of an obligate heterodimer of the alpha and beta subunits.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"bursicon neuropeptide hormone complex","termid":"GO:0031395"}


id: PBO:0050432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein K pseudogene 3","termid":"PBO:0050432"}


id: GO:0019991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a septate junction, an intercellular junction found in invertebrate epithelia that is characterized by a ladder like appearance in electron micrographs and thought to provide structural strength and to provide a barrier to diffusion of solutes through the intercellular space.","definition_xrefs":["GOC:ai","PMID:5272312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tight junction assembly","termid":"GO:0120192"},{"relation_name":"part_of","term_name":"apical junction assembly","termid":"GO:0043297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"septate junction assembly","termid":"GO:0019991"}


id: MONDO:0100411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute myeloid leukemia, NPM1 gene mutation (obsolete MONDO:0100411)","termid":"MONDO:0100411","xrefs":{"Monarch":{"xref_id":"0100411"}}}


id: GO:0000717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The unwinding, or local denaturation, of the DNA duplex to create a bubble around the site of the DNA damage.","definition_xrefs":["GOC:elh","PMID:10197977"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide-excision repair, DNA duplex unwinding (obsolete GO:0000717)","termid":"GO:0000717"}


id: GO:0051647
data:
  {"annotated_genes":["SJAG_00397","SJAG_04003","SJAG_03835","SJAG_00113","SJAG_02737","SJAG_04387","SJAG_02045","SJAG_01370","SJAG_00368","SJAG_04001","SJAG_02431","SJAG_00140","SJAG_01613","SJAG_02286","SJAG_02561","SJAG_04143","SJAG_01297","SJAG_01863","SJAG_03264","SJAG_03073","SJAG_01662","SJAG_00594","SJAG_03673","SJAG_04597","SJAG_02509","SJAG_05185","SJAG_02651"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110229],"is_not":false,"summary":null,"term":"GO:0051647"},{"annotations":[89614,99491,93264,104900,97110,102652,105191,113037,115943,92867,113388,118954,93728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[113211,103366,108546],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[106819,106487,114761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007097"},{"annotations":[72538,103377,111586,115945,109389,118958,76788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098863"},{"annotations":[99566,101149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[101150,99493,89618,78100,93266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[96301],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902854"}]},"cv_name":"biological_process","definition":"Any process in which the nucleus is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00594":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01863":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02431":null,"SJAG_02509":null,"SJAG_02561":null,"SJAG_02651":null,"SJAG_02737":null,"SJAG_03073":null,"SJAG_03264":null,"SJAG_03673":null,"SJAG_03835":null,"SJAG_04001":null,"SJAG_04003":null,"SJAG_04143":null,"SJAG_04387":null,"SJAG_04597":null,"SJAG_05185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nucleus localization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cell nucleus localization","type":"exact"},{"name":"establishment and maintenance of nucleus localization","type":"exact"},{"name":"localization of nucleus","type":"exact"},{"name":"nucleus localisation","type":"exact"}],"termid":"GO:0051647","terms_by_termid":{"GO:0000743":null,"GO:0007097":null,"GO:0030989":null,"GO:0032118":null,"GO:0051647":null,"GO:0090561":null,"GO:0098863":null,"GO:1902854":null}}


id: PBO:0057369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ak","termid":"PBO:0057369"}


id: PBO:0081193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zic family member 5","termid":"PBO:0081193"}


id: PBO:0068668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 49, pseudogene","termid":"PBO:0068668"}


id: PBO:0084152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High affinity nicotinic acid plasma membrane permease; responsible for uptake of low levels of nicotinic acid; expression of the gene increases in the absence of extracellular nicotinic acid or para-aminobenzoate (PABA)","termid":"PBO:0084152"}


id: GO:2000940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of plant-type cell wall cellulose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plant-type cell wall cellulose catabolic process","termid":"GO:2000939"},{"relation_name":"is_a","term_name":"negative regulation of cell wall polysaccharide catabolic process","termid":"GO:2000967"},{"relation_name":"negatively_regulates","term_name":"plant-type cell wall cellulose catabolic process","termid":"GO:0044348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of plant-type cell wall cellulose catabolic process","synonyms":[{"name":"negative regulation of plant-type cell wall polysaccharide breakdown","type":"exact"}],"termid":"GO:2000940"}


id: PBO:0067800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 102","termid":"PBO:0067800"}


id: PR:Q9P7I9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transmembrane emp24 domain-containing protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04512","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosomal protein P24B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.17","secondary_identifiers":["UniProtKB:Q9P7I9"],"synonyms":[{"name":"Spom972h-TMED2","type":"exact"}],"termid":"PR:Q9P7I9"}


id: PBO:0062050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily U member 2 pseudogene","termid":"PBO:0062050"}


id: MONDO:0022819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital arteriovenous shunt (obsolete MONDO:0022819)","termid":"MONDO:0022819","xrefs":{"Monarch":{"xref_id":"0022819"}}}


id: GO:0015113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nitrite (NO2-) ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"nitrite transmembrane transporter activity","synonyms":[{"name":"nitrite/nitrate porter activity","type":"related"}],"termid":"GO:0015113"}


id: FYPO:0007937
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the number of sites of DNA breakpoint junctions is greater than normal during stationary phase.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of DNA breakpoint junctions","termid":"FYPO:0007936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased number of DNA breakpoint junctions during stationary phase","termid":"FYPO:0007937"}


id: MONDO:1011949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occipital dysplasia, non-human animal","secondary_identifiers":["OMIA:000732"],"termid":"MONDO:1011949","xrefs":{"Monarch":{"xref_id":"1011949"}}}


id: MONDO:0044768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant extra-adrenal parasympathetic paraganglioma arising from paraganglia in the vagus nerve. Patients may present with a slow growing, painless mass in the neck, hoarseness, vocal cord paralysis, and dysphagia.","definition_xrefs":["NCIT:C8427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vagus nerve neoplasm","termid":"MONDO:0001608"},{"relation_name":"is_a","term_name":"head and neck paraganglioma","termid":"MONDO:0006239"},{"relation_name":"is_a","term_name":"parasympathetic paraganglioma","termid":"MONDO:0021052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vagus nerve paraganglioma","secondary_identifiers":["GARD:8620","UMLS:C0474819","MEDGEN:141635","SCTID:253030004"],"synonyms":[{"name":"paraganglioma of the vagal body","type":"exact"},{"name":"paraganglioma of the vagus nerve","type":"exact"},{"name":"paraganglioma of vagal body","type":"exact"},{"name":"paraganglioma of vagus nerve","type":"exact"},{"name":"vagal body paraganglioma","type":"exact"},{"name":"vagal paraganglioma","type":"exact"},{"name":"vagus nerve paraganglioma","type":"exact"}],"termid":"MONDO:0044768","xrefs":{"Monarch":{"xref_id":"0044768"}}}


id: PBO:0053501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 484","termid":"PBO:0053501"}


id: PR:O74899
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC576.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C576.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.17c","synonyms":[{"name":"Spom972h-SPCC576.17c","type":"exact"}],"termid":"PR:O74899"}


id: PR:O43028
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vac8 gene.","definition_xrefs":["UniProtKB:O43028","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.14c","synonyms":[{"name":"Spom972h-vac8","type":"exact"}],"termid":"PR:O43028"}


id: MONDO:0000733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare developmental defect of the eye characterized by usually bilateral absence of the normal protrusion of the cornea from the sclera, the corneal curvature being the same as that of the adjacent sclera. Most patients develop hyperopia, hazy corneal limbus, and arcus lipoides at an early age. The condition may present as an autosomal dominant or an autosomal recessive form, with the latter showing more severe signs and symptoms (such as a round and opaque thickening located centrally in the cornea) and more frequent association with other ocular anomalies.","definition_xrefs":["Orphanet:53691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cornea plana","secondary_identifiers":["GARD:16657","ICD10CM:Q13.4","icd11.foundation:262157734","DOID:0060287","MEDGEN:576329","SCTID:204145006","OMIMPS:121400","HP:0007720","UMLS:C0344529"],"synonyms":[{"name":"congenital cornea plana","type":"exact"},{"name":"flat cornea","type":"exact"}],"termid":"MONDO:0000733","xrefs":{"Monarch":{"xref_id":"0000733"}}}


id: PBO:0088585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retromer complex arrestin related endocytic adaptor ubunit Vps26","termid":"PBO:0088585"}


id: PBO:0089627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-1 alpha folding chaperone, zinc finger protein Zpr1","termid":"PBO:0089627"}


id: GO:0006781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions that utilize succinyl-CoA in the synthesis of protoporphyrin IX.","definition_xrefs":["GOC:isa_complete","ISBN:0879010479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinyl-CoA metabolic process","termid":"GO:0006104"},{"relation_name":"is_a","term_name":"porphyrin-containing compound biosynthetic process","termid":"GO:0006779"},{"relation_name":"part_of","term_name":"uroporphyrinogen III biosynthetic process","termid":"GO:0006780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0033013","GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"succinyl-CoA pathway","synonyms":[{"name":"biosynthesis of protoporphyrin IX via succinyl CoA","type":"exact"},{"name":"biosynthesis of protoporphyrin IX via succinyl-CoA","type":"exact"},{"name":"biosynthetic process of protoporphyrin IX via succinyl CoA","type":"exact"},{"name":"biosynthetic process of protoporphyrin IX via succinyl-CoA","type":"exact"},{"name":"succinyl CoA pathway","type":"exact"}],"termid":"GO:0006781"}


id: MONDO:0009418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadism with low-grade mental deficiency and microcephaly","secondary_identifiers":["MEDGEN:383787","OMIM:241000","UMLS:C1855858","MESH:C565482"],"synonyms":[{"name":"hypogonadism with low-grade mental deficiency and microcephaly","type":"exact"}],"termid":"MONDO:0009418","xrefs":{"Monarch":{"xref_id":"0009418"}}}


id: PBO:0017878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid transmembrane transporter Avt5","termid":"PBO:0017878"}


id: MONDO:0015550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of epidermolysis bullosa simplex in which blistering occurs above the basal keratinocytes.","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"suprabasal epidermolysis bullosa simplex","secondary_identifiers":["icd11.foundation:1980336421","Orphanet:158661","SCTID:724840004","UMLS:C4511300","MEDGEN:1388459"],"synonyms":[{"name":"epidermis suprabasal layer epidermolysis bullosa simplex","type":"exact"},{"name":"epidermolysis bullosa simplex of epidermis suprabasal layer","type":"exact"}],"termid":"MONDO:0015550","xrefs":{"Monarch":{"xref_id":"0015550"}}}


id: PBO:0045750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epstein Barr virus modification site 1","termid":"PBO:0045750"}


id: MONDO:0017149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Drug- or toxin-induced pulmonary arterial hypertension (PAH) is a form of pulmonary arterial hypertension (PAH) secondary to the exposition to drugs. Drug- or toxin-induced PAH is characterized by elevated pulmonary arterial resistance leading to right heart failure. Drug or toxin induced PAH is progressive and potentially fatal.","definition_xrefs":["Orphanet:275786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary arterial hypertension","termid":"MONDO:0015924"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drug- or toxin-induced pulmonary arterial hypertension","secondary_identifiers":["UMLS:C0340544","GARD:21026","EFO:0009192","MEDGEN:573792"],"synonyms":[{"name":"drug- or toxin-induced PAH","type":"exact"}],"termid":"MONDO:0017149","xrefs":{"Monarch":{"xref_id":"0017149"}}}


id: GO:0061194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the taste bud are generated and organized. The taste bud is a specialized area of the tongue that contains taste receptors.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ morphogenesis","termid":"GO:0090596"},{"relation_name":"part_of","term_name":"tongue morphogenesis","termid":"GO:0043587"},{"relation_name":"part_of","term_name":"taste bud development","termid":"GO:0061193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"taste bud morphogenesis","termid":"GO:0061194"}


id: MONDO:0007857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Keratosis palmaris et plantaris-clinodactyly syndrome is characterized by the association of palmoplantar keratosis with clinodactyly of the fifth finger. Less than 20 cases have been described in the literature so far, and the majority of reported patients were of Mexican origin. Transmission is autosomal dominant.","definition_xrefs":["Orphanet:86919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"keratosis palmaris et plantaris-clinodactyly syndrome","secondary_identifiers":["OMIM:148520","UMLS:C1835663","GARD:16766","MEDGEN:320656","MESH:C563646"],"synonyms":[{"name":"keratosis palmaris ET plantaris with clinodactyly","type":"related"},{"name":"palmoplantar keratoderma-clinodactyly syndrome","type":"exact"}],"termid":"MONDO:0007857","xrefs":{"Monarch":{"xref_id":"0007857"}}}


id: MONDO:0007417
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88527],"is_not":false,"summary":null,"term":"MONDO:0007417"}]},"cv_name":"mondo","definition":"Darier disease (DD) is a keratinization disorder characterized by the development of keratotic papules in seborrheic areas and specific nail anomalies.","definition_xrefs":["Orphanet:218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Darier disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C84665","DOID:2734","MedDRA:10023369","MEDGEN:5956","SCTID:48611009","OMIM:124200","UMLS:C0022595","Wikipedia:Darier%27s_disease","NORD:1329","GARD:6243","MESH:D007644","ICD9:757.39","icd11.foundation:643994486"],"synonyms":[{"name":"DAR","type":"related"},{"name":"Darier White disease","type":"related"},{"name":"Darier disease","type":"exact"},{"name":"Darier disease, acral hemorrhagic type","type":"related"},{"name":"Darier disease, segmental","type":"related"},{"name":"Darier's disease","type":"exact"},{"name":"Darier-White disease","type":"exact"},{"name":"Keratosis Follicularis","type":"exact"},{"name":"dar","type":"related"},{"name":"keratosis follicularis","type":"exact"}],"termid":"MONDO:0007417","terms_by_termid":{"MONDO:0007417":null},"xrefs":{"Monarch":{"xref_id":"0007417"}}}


id: PBO:0058674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6802","termid":"PBO:0058674"}


id: FYPO:0003192
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is abolished during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to nucleus during mitosis","synonyms":[{"name":"abolished protein localisation to nucleus during mitosis","type":"exact"},{"name":"abolished protein localization to nucleus during mitosis during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nucleus during mitosis during vegetative growth","type":"exact"},{"name":"abolished protein localization to nucleus during mitotic M phase","type":"related"},{"name":"abolished protein localization to nucleus during mitotic M-phase","type":"related"},{"name":"abolished protein localization to nucleus during mitotic nuclear division","type":"exact"},{"name":"nuclear exclusion during mitosis","type":"related"},{"name":"nuclear protein exclusion during mitosis","type":"related"},{"name":"protein localization to nucleus abolished during mitosis","type":"exact"}],"termid":"FYPO:0003192"}


id: _global:has_severity
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a phenotype and its observed severity in a cell. Can also be used to capture expressivity, i.e. the extent to which a phenotype is expressed in an individual.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_severity","synonyms":[{"name":"has_expressivity","type":"exact"}],"termid":"_global:has_severity"}


id: PBO:0052860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-3","termid":"PBO:0052860"}


id: MONDO:0013363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mesomelic dysplasia, Kantaputra type","termid":"MONDO:0007977"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 2","termid":"MONDO:0016953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"chromosome 2q31.1 duplication syndrome","secondary_identifiers":["UMLS:C3150940","DOID:0060458","GARD:15688","MEDGEN:462290","Orphanet:294026","OMIM:613681"],"synonyms":[{"name":"2q31.1 microduplication syndrome","type":"exact"},{"name":"chromosome 2q31.1 duplication syndrome","type":"exact"},{"name":"dup(2)(q31.1)","type":"exact"},{"name":"mesomelic dysplasia, 2Q31.1 Duplication-related","type":"related"},{"name":"trisomy 2q31.1","type":"exact"}],"termid":"MONDO:0013363","xrefs":{"Monarch":{"xref_id":"0013363"}}}


id: GO:1903960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anion transmembrane transport.","definition_xrefs":["GOC:vw","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transmembrane transport","termid":"GO:0034766"},{"relation_name":"is_a","term_name":"negative regulation of monoatomic anion transport","termid":"GO:1903792"},{"relation_name":"is_a","term_name":"regulation of monoatomic anion transmembrane transport","termid":"GO:1903959"},{"relation_name":"negatively_regulates","term_name":"monoatomic anion transmembrane transport","termid":"GO:0098656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of anion transmembrane transport","synonyms":[{"name":"down regulation of anion transmembrane transport","type":"exact"},{"name":"down-regulation of anion transmembrane transport","type":"exact"},{"name":"downregulation of anion transmembrane transport","type":"exact"},{"name":"inhibition of anion transmembrane transport","type":"narrow"}],"termid":"GO:1903960"}


id: GO:0042971
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of lactone from one side of a membrane to the other. A lactone is a cyclic ester of a hydroxy carboxylic acid, containing a 1-oxacycloalkan-2-one structure, or an analogue having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete lactone transmembrane transporter activity (obsolete GO:0042971)","termid":"GO:0042971"}


id: MONDO:0006541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epidermolysis bullosa (EB) is a group of genetic skin diseases that cause the skin to blister very easily. Blisters form in response to minor injuries or friction, such as rubbing or scratching. There are four main types of epidermolysis bullosa: dystrophic epidermolysis bullosa Epidermolysis bullosa simplex Junctional epidermolysis bullosa Kindler Syndrome Identifying the exact type can be hard because there are many subtypes of EB. Within each type or subtype, a person may be mildly or severely affected. The disease can range from being a minor inconvenience to completely disabling, and fatal in some cases. Most types of EB are inherited. The inheritance pattern may be autosomal dominant or autosomal recessive. Management involves protecting the skin, reducing friction against the skin, and keeping the skin cool.","direct_ancestors":[{"relation_name":"is_a","term_name":"vesiculobullous skin disease","termid":"MONDO:0006617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa","secondary_identifiers":["EFO:1000690","DOID:2730","ICD10CM:Q81","NANDO:2201000","NCIT:C67383","NANDO:1200234","NANDO:2100284","MEDGEN:41832","Wikipedia:Epidermolysis_bullosa","ICD9:757.39","MESH:D004820","GARD:6359","SCTID:61003004","UMLS:C0014527"],"synonyms":[{"name":"EB","type":"related"},{"name":"acantholysis bullosa","type":"exact"},{"name":"epidermolysis bullosa","type":"exact"}],"termid":"MONDO:0006541","xrefs":{"Monarch":{"xref_id":"0006541"}}}


id: GO:0072755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a benomyl stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to benomyl (obsolete GO:0072755)","termid":"GO:0072755"}


id: PBO:0091029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp20","termid":"PBO:0091029"}


id: GO:0048876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of the internal steady state of the amount of a chemical at the level of the retina.","definition_xrefs":["GOC:isa_complete"],"gene_count":0,"genotype_count":0,"name":"obsolete chemical homeostasis within retina (obsolete GO:0048876)","termid":"GO:0048876"}


id: PBO:0064595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 2 homeobox associating factor 1","termid":"PBO:0064595"}


id: MONDO:0030719
data:
  {"annotated_genes":["SJAG_01400"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88935],"is_not":false,"summary":null,"term":"MONDO:0030719"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 82","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1803416","OMIM:619804","UMLS:C5676948"],"synonyms":[{"name":"DFNA82","type":"exact"},{"name":"deafness, autosomal dominant 82","type":"narrow"}],"termid":"MONDO:0030719","terms_by_termid":{"MONDO:0030719":null},"xrefs":{"Monarch":{"xref_id":"0030719"}}}


id: GO:2000011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of adaxial/abaxial pattern formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"adaxial/abaxial pattern specification","termid":"GO:0009955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adaxial/abaxial pattern formation","synonyms":[{"name":"regulation of adaxial/abaxial pattern specification","type":"related"}],"termid":"GO:2000011"}


id: PBO:0077264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein with EGF like and two follistatin like domains 1","termid":"PBO:0077264"}


id: PBO:0061881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte secreted protein family member 4A","termid":"PBO:0061881"}


id: PBO:0000466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein Rga8","termid":"PBO:0000466"}


id: PBO:0048341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 52","termid":"PBO:0048341"}


id: MONDO:1012029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bleeding disorder, non-human animal","termid":"MONDO:1011685"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bleeding disorder, pig","secondary_identifiers":["OMIA:000113-9823"],"termid":"MONDO:1012029","xrefs":{"Monarch":{"xref_id":"1012029"}}}


id: MONDO:0016812
data:
  {"annotated_genes":["SJAG_03275","SJAG_03098"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012994"},{"annotations":[86869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007495"}]},"cv_name":"mondo","definition":"Dopa-responsive dystonia (DRD) describes a group of neurometabolic disorders characterized by dystonia that typically shows diurnal fluctuations, that responds excellently to levodopa (L-dopa) and that is comprised of autosomal dominant dopa-responsive dystonia (DYT5a), autosomal recessive dopa-responsive dystonia (DYT5b) and dopa responsive dystonia due to sepiapterin reductase (SR) deficiency.","definition_xrefs":["Orphanet:255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03098":null,"SJAG_03275":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"dopa-responsive dystonia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C538007","NCIT:C116719","SCTID:230332007","icd11.foundation:1534901505","NANDO:2200885","NANDO:1200516","GARD:12144"],"synonyms":[{"name":"DYT-GCH1 (subtype)","type":"related"},{"name":"DYT-SPR (subtype)","type":"related"},{"name":"DYT-TH (subtype)","type":"related"},{"name":"DYT5","type":"related"},{"name":"DYT5 dystonia","type":"exact"},{"name":"HPD with diurnal fluctuation","type":"exact"},{"name":"Segawa's disease","type":"exact"},{"name":"dopa-responsive dystonia","type":"exact"},{"name":"hereditary progressive dystonia with diurnal fluctuation","type":"exact"}],"termid":"MONDO:0016812","terms_by_termid":{"MONDO:0007495":null,"MONDO:0012994":null},"xrefs":{"Monarch":{"xref_id":"0016812"}}}


id: PBO:0070060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 17, pseudogene","termid":"PBO:0070060"}


id: _global:phosphorylates
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"molecularly_interacts_with","termid":"_global:molecularly_interacts_with"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylates","secondary_identifiers":["RO:0002447"],"termid":"_global:phosphorylates"}


id: PBO:0088113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar aspartate and glutamate exporter; member of a family of seven genes (AVT1-7) related to vesicular GABA-glycine transporters; involved in compartmentalizing acidic amino acids in response to nitrogen starvation; AVT6 has a paralog, AVT5, that arose from the whole genome duplication","termid":"PBO:0088113"}


id: PBO:0053535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 537","termid":"PBO:0053535"}


id: GO:0034223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of ascospore wall chitin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ascospore wall chitin biosynthetic process (obsolete GO:0034223)","synonyms":[{"name":"regulation of ascospore wall chitin anabolism","type":"exact"},{"name":"regulation of ascospore wall chitin biosynthesis","type":"exact"},{"name":"regulation of ascospore wall chitin formation","type":"exact"},{"name":"regulation of ascospore wall chitin synthesis","type":"exact"}],"termid":"GO:0034223"}


id: PBO:0088740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exomer complex ChAPs family (Chs5p-Arf1p-binding) protein Bch1","termid":"PBO:0088740"}


id: MONDO:0850197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medulloblastoma that is characterized as a molecular subtype by activation of the sonic hedgehog (SHH) pathway and TP53 mutations that may be present or absent.","definition_xrefs":["DOID:0080703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma","termid":"MONDO:0007959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medulloblastoma SHH activated","secondary_identifiers":["MEDGEN:1375478","NCIT:C129441","UMLS:C4330671"],"termid":"MONDO:0850197","xrefs":{"Monarch":{"xref_id":"0850197"}}}


id: PBO:0113758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin-like histone chaperone/CENP-A amino terminus domain (NTD) isomerase Ani1/Fkbp39","termid":"PBO:0113758"}


id: PBO:0000703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SR family","termid":"PBO:0000703"}


id: MONDO:0006765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the genus fusobacterium.","definition_xrefs":["MESH:D005674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fusobacteriaceae infectious disease","termid":"MONDO:0006925"},{"relation_name":"is_a","term_name":"anaerobic bacteria infectious disease","termid":"MONDO:0024389"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fusobacterium infectious disease","secondary_identifiers":["EFO:1000943","ICD9:041.84","SCTID:712657002","UMLS:C4039413","MEDGEN:872278"],"synonyms":[{"name":"Fusobacterium caused disease or disorder","type":"exact"},{"name":"Fusobacterium disease or disorder","type":"exact"},{"name":"infection caused by Fusobacterium","type":"related"},{"name":"infection due to Fusobacterium","type":"exact"}],"termid":"MONDO:0006765","xrefs":{"Monarch":{"xref_id":"0006765"}}}


id: PBO:0039835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 5","termid":"PBO:0039835"}


id: MONDO:0010559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"MASA syndrome (Mental retardation, Aphasia, Spastic paraplegia, Adducted thumbs) is a historical term used to describe a phenotype now considered to be part of the X-linked L1 clinical spectrum (L1 syndrome). MASA is characterized by mild to moderate intellectual deficit, delayed development of speech, hypotonia progressing to spasticity or spastic paraplegia, adducted thumbs, and mild to moderate distension of the cerebral ventricles.","definition_xrefs":["Orphanet:2466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"},{"relation_name":"is_a","term_name":"L1 syndrome","termid":"MONDO:0017140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"MASA syndrome","secondary_identifiers":["OMIM:303350","MEDGEN:162894","GARD:6986","DOID:0060246","icd11.foundation:1973644723","SCTID:716996008","UMLS:C0795953","NCIT:C129930"],"synonyms":[{"name":"CRASH syndrome","type":"related"},{"name":"CRASH syndrome, X-linked recessive","type":"related"},{"name":"Clasped thumb and intellectual disability","type":"related"},{"name":"Clasped thumb and mental retardation","type":"related"},{"name":"Gareis-Mason syndrome","type":"exact"},{"name":"MASA syndrome","type":"exact"},{"name":"X-linked complicated hereditary spastic paraplegia type 1","type":"exact"},{"name":"X-linked corpus callosum agenesis","type":"exact"},{"name":"X-linked spastic paraplegia 1","type":"exact"},{"name":"adducted thumb with intellectual disability","type":"related"},{"name":"adducted thumb with mental retardation","type":"related"},{"name":"hereditary spastic paraplegia 1","type":"exact"},{"name":"intellectual disability aphasia shuffling Gait adducted thumbs (MASA)","type":"related"},{"name":"intellectual disability, aphasia, shuffling Gait, and adducted thumbs","type":"related"},{"name":"intellectual disability-aphasia-shuffling gait-adducted thumbs syndrome","type":"exact"},{"name":"masa syndrome, X-linked recessive","type":"exact"},{"name":"mental retardation aphasia shuffling Gait adducted thumbs (MASA)","type":"related"},{"name":"mental retardation, aphasia, shuffling Gait, and adducted thumbs","type":"related"},{"name":"spastic paraplegia 1","type":"related"},{"name":"spastic paraplegia 1, X-linked","type":"related"},{"name":"spastic paraplegia, X-linked","type":"exact"},{"name":"thumb congenital clasped with intellectual disability","type":"related"},{"name":"thumb congenital clasped with mental retardation","type":"related"},{"name":"thumb, congenital Clasped, with intellectual disability","type":"related"},{"name":"thumb, congenital Clasped, with mental retardation","type":"related"}],"termid":"MONDO:0010559","xrefs":{"Monarch":{"xref_id":"0010559"}}}


id: SO:0001693
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A restriction enzyme cleavage site where both strands are cut at the same position.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction_enzyme_cleavage_junction","termid":"SO:0001688"},{"relation_name":"part_of","term_name":"blunt_end_restriction_enzyme_cleavage_site","termid":"SO:0001691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blunt_end_restriction_enzyme_cleavage_junction","synonyms":[{"name":"blunt end restriction enzyme cleavage site","type":"related"}],"termid":"SO:0001693"}


id: PBO:0027343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_primase_activity","termid":"PBO:0027343"}


id: MONDO:0007587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"external auditory canal atresia-vertical talus-hypertelorism syndrome","secondary_identifiers":["MEDGEN:361813","UMLS:C1876181","OMIM:133705","GARD:4638","Orphanet:3023"],"synonyms":[{"name":"Rasmussen Johnsen Thomsen syndrome","type":"related"},{"name":"Rasmussen syndrome","type":"related"},{"name":"Rasmussen-Johnsen-Thomsen syndrome","type":"exact"},{"name":"external auditory canal, bilateral atresia of, with congenital vertical talus","type":"related"},{"name":"inherited congenital bilateral atresia of the external auditory canal, congenital bilateral vertical talus and increased interocular distance","type":"related"}],"termid":"MONDO:0007587","xrefs":{"Monarch":{"xref_id":"0007587"}}}


id: GO:0030686
data:
  {"annotated_genes":["SJAG_04979","SJAG_00965","SJAG_01366","SJAG_03252","SJAG_04346","SJAG_02894","SJAG_00882","SJAG_05186","SJAG_04339","SJAG_03156","SJAG_04033","SJAG_01272","SJAG_04224","SJAG_01115","SJAG_03931","SJAG_02300","SJAG_05187","SJAG_00142","SJAG_00838","SJAG_01494","SJAG_02250","SJAG_02372","SJAG_01799","SJAG_02681","SJAG_02759","SJAG_01275","SJAG_04069","SJAG_01169","SJAG_01877","SJAG_04847","SJAG_00245","SJAG_02830","SJAG_00538","SJAG_00572","SJAG_00879","SJAG_03617","SJAG_03654"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61077,62433,67448,72107,72551,73666,75538,78115,78330,79743,94494,101963,108985,115056,117719,118747],"is_not":false,"summary":null,"term":"GO:0030686"},{"annotations":[77759,80155,81994],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034457"},{"annotations":[99792,81950,74631],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030690"},{"annotations":[74578,80439],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030692"},{"annotations":[75444,76607,77978],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070545"},{"annotations":[73156,75360,81541,78649,73477],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034388"},{"annotations":[80345,76357,95621,79891,77793],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034456"}]},"cv_name":"cellular_component","definition":"A large ribonucleoprotein complex considered to be the earliest preribosomal complex. In S. cerevisiae, it has a size of 90S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins.","definition_xrefs":["PMID:12957375","GOC:vw","GOC:krc","PMID:15120992","PMID:12150911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preribosome","termid":"GO:0030684"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_00245":null,"SJAG_00538":null,"SJAG_00572":null,"SJAG_00838":null,"SJAG_00879":null,"SJAG_00882":null,"SJAG_00965":null,"SJAG_01115":null,"SJAG_01169":null,"SJAG_01272":null,"SJAG_01275":null,"SJAG_01366":null,"SJAG_01494":null,"SJAG_01799":null,"SJAG_01877":null,"SJAG_02250":null,"SJAG_02300":null,"SJAG_02372":null,"SJAG_02681":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_02894":null,"SJAG_03156":null,"SJAG_03252":null,"SJAG_03617":null,"SJAG_03654":null,"SJAG_03931":null,"SJAG_04033":null,"SJAG_04069":null,"SJAG_04224":null,"SJAG_04339":null,"SJAG_04346":null,"SJAG_04847":null,"SJAG_04979":null,"SJAG_05186":null,"SJAG_05187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0030684"}],"interesting_parent_ids":["GO:0030684","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"90S preribosome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0030686","terms_by_termid":{"GO:0030686":null,"GO:0030690":null,"GO:0030692":null,"GO:0034388":null,"GO:0034456":null,"GO:0034457":null,"GO:0070545":null}}


id: PBO:0049317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase theta pseudogene 2","termid":"PBO:0049317"}


id: PBO:0004857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein Rad9 homolog, Rhp9","termid":"PBO:0004857"}


id: GO:1903182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of SUMO ligase activity.","definition_xrefs":["GO_REF:0000059","GOC:PARL","GOC:bf","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of SUMO transferase activity (obsolete GO:1903182)","synonyms":[{"name":"regulation of SMT3 conjugating enzyme","type":"exact"},{"name":"regulation of SUMO conjugating enzyme activity","type":"exact"}],"termid":"GO:1903182"}


id: PBO:0111792
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase","termid":"PBO:0111792"}


id: PBO:0086202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; required for the stability of Oli1p (Atp9p) mRNA; also required for the Oli1p ring formation; YMR098C is not an essential gene","termid":"PBO:0086202"}


id: PBO:0041367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 45","termid":"PBO:0041367"}


id: FYPO:0002223
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the meiotic cell cycle is arrested in meiosis II. Meiosis II is the second phase of meiosis, in which cells divide and separate the two chromatids in each chromosome.","definition_xrefs":["GO:0007135","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested meiosis I","termid":"FYPO:0002817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell cycle arrest in meiosis II","synonyms":[{"name":"abnormal cell cycle arrest in second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0002223"}


id: PBO:0087613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the condensin complex; condensin reorganizes chromosomes during both mitosis and meiosis; forms a subcomplex with Smc2p that has ATP-hydrolyzing and DNA-binding activity, but other condensin subunits are required for chromatin binding; required for tRNA gene clustering at the nucleolus; potential Cdc28p substrate","termid":"PBO:0087613"}


id: GO:0004092
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + carnitine = (R)-O-acetylcarnitine + CoA.","definition_xrefs":["EC:2.3.1.7","RHEA:21136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carnitine O-acyltransferase activity","termid":"GO:0016406"},{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"carnitine O-acetyltransferase activity","secondary_identifiers":["MetaCyc:CARNITINE-O-ACETYLTRANSFERASE-RXN","KEGG_REACTION:R02396","GO:0004093","Reactome:R-HSA-390284","Reactome:R-HSA-390291","GO:0004094"],"synonyms":[{"name":"CATC","type":"related"},{"name":"acetyl-CoA-carnitine O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:carnitine O-acetyltransferase activity","type":"related"},{"name":"acetylcarnitine transferase activity","type":"related"},{"name":"carnitine O-acetyltransferase I activity","type":"narrow"},{"name":"carnitine O-acetyltransferase II activity","type":"narrow"},{"name":"carnitine acetyl coenzyme A transferase activity","type":"related"},{"name":"carnitine acetylase activity","type":"related"},{"name":"carnitine acetyltransferase activity","type":"related"},{"name":"carnitine-acetyl-CoA transferase activity","type":"related"}],"termid":"GO:0004092"}


id: PBO:0065620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase mitochondrial 1","termid":"PBO:0065620"}


id: PATO:0000564
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000564 thickness value (obsolete PATO:0000564)","termid":"PATO:0000564"}


id: PBO:0028637
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_DNA_double-strand_break_formation","termid":"PBO:0028637"}


id: PBO:0068944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 188, pseudogene","termid":"PBO:0068944"}


id: PBO:0036246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy/CVT pathway ENTH/VHS domain protein Irs4 (predicted)","termid":"PBO:0036246"}


id: PBO:0066424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine-glutamic acid dipeptide repeats","termid":"PBO:0066424"}


id: GO:0039533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the series of molecular signals generated as a consequence of the cytoplasmic pattern recognition receptor (PRR) MDA-5 (also known as IFIH1) binding to viral RNA.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"MDA-5 signaling pathway","termid":"GO:0039530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of MDA-5 signaling pathway","synonyms":[{"name":"regulation of IFIH1 signaling pathway","type":"exact"},{"name":"regulation of MDA-5 signalling pathway","type":"exact"},{"name":"regulation of MDA5 signaling pathway","type":"exact"},{"name":"regulation of melanoma differentiation-associated gene 5 signaling pathway","type":"exact"}],"termid":"GO:0039533"}


id: PBO:0057978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3713","termid":"PBO:0057978"}


id: MONDO:0015342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute transverse myelitis (ATM) is an inflammatory demyelinating disorder of the spinal cord that can be either idiopathic (IATM) or secondary to a known cause (SATM).","definition_xrefs":["Orphanet:139417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelitis","termid":"MONDO:0002565"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute transverse myelitis","secondary_identifiers":["ICD9:341.20","NCIT:C128378","UMLS:C0270627","ICD9:323.9","GARD:19913","MESH:D009188","SCTID:47000000","MEDGEN:82847"],"termid":"MONDO:0015342","xrefs":{"Monarch":{"xref_id":"0015342"}}}


id: GO:1903008
data:
  {"annotated_genes":["SJAG_03428","SJAG_01497","SJAG_00188","SJAG_03345","SJAG_03189","SJAG_02746","SJAG_05000","SJAG_03106","SJAG_00898","SJAG_02096","SJAG_01074","SJAG_04862","SJAG_04283","SJAG_03232"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116411],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140708"},{"annotations":[77383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051228"},{"annotations":[78395,79979,118091,107586,65367,105066,71597,77126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072344"},{"annotations":[105545,72560,106649,76308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032790"}]},"cv_name":"biological_process","definition":"The disaggregation of an organelle into its constituent components.","definition_xrefs":["GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"},{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_00898":null,"SJAG_01074":null,"SJAG_01497":null,"SJAG_02096":null,"SJAG_02746":null,"SJAG_03106":null,"SJAG_03189":null,"SJAG_03232":null,"SJAG_03345":null,"SJAG_03428":null,"SJAG_04283":null,"SJAG_04862":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organelle disassembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"organelle degradation","type":"exact"}],"termid":"GO:1903008","terms_by_termid":{"GO:0032790":null,"GO:0051228":null,"GO:0072344":null,"GO:0140708":null}}


id: PBO:0061676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 85","termid":"PBO:0061676"}


id: GO:0044578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathway resulting in the formation of butyryl-CoA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"},{"relation_name":"is_a","term_name":"fatty-acyl-CoA biosynthetic process","termid":"GO:0046949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0006629","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"butyryl-CoA biosynthetic process","synonyms":[{"name":"butyryl-CoA biosynthesis","type":"exact"}],"termid":"GO:0044578"}


id: GO:0019016
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A viral genome that consists of one continuous nucleic acid molecule.","definition_xrefs":["GOC:pk"],"gene_count":0,"genotype_count":0,"name":"obsolete non-segmented viral genome (obsolete GO:0019016)","termid":"GO:0019016"}


id: GO:0060486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a club cell. A club cell is an unciliated epithelial cell found in the respiratory and terminal bronchioles.","definition_xrefs":["PMID:28144783","GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung epithelial cell differentiation","termid":"GO:0060487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"club cell differentiation","synonyms":[{"name":"Clara cell differentiation","type":"exact"}],"termid":"GO:0060486"}


id: GO:0019902
data:
  {"annotated_genes":["SJAG_04638","SJAG_03793"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74817],"is_not":false,"summary":null,"term":"GO:0019902"},{"annotations":[64486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019903"}]},"cv_name":"molecular_function","definition":"Binding to a phosphatase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03793":null,"SJAG_04638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"phosphatase binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0019902","terms_by_termid":{"GO:0019902":null,"GO:0019903":null}}


id: MONDO:0859318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"pseudohypoaldosteronism type 1","termid":"MONDO:0019161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"pseudohypoaldosteronism, type IB3, autosomal recessive","secondary_identifiers":["MEDGEN:1824029","OMIM:620126","UMLS:C5774256"],"termid":"MONDO:0859318","xrefs":{"Monarch":{"xref_id":"0859318"}}}


id: PBO:0049460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GYG2 antisense RNA 1","termid":"PBO:0049460"}


id: PBO:0083157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF YNL227C/JJJ1","termid":"PBO:0083157"}


id: MOD:01597
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ8plex-116 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ8plex-116 reporter+balance reagent acylated residue","termid":"MOD:01549"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter fragment","termid":"MOD:01593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-116 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01597"}


id: PBO:0030615
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cell_wall-degrading_enzymes","termid":"PBO:0030615"}


id: MONDO:0013767
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88487],"is_not":false,"summary":null,"term":"MONDO:0013767"}]},"cv_name":"mondo","definition":"RAS-associated autoimmune leukoproliferative disease (RALD) is a rare genetic disorder characterized by monocytosis, autoimmune cytopenias, lymphoproliferation, hepatosplenomegaly, and hypergammaglobulinemia.","definition_xrefs":["Orphanet:268114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune lymphoproliferative syndrome","termid":"MONDO:0017979"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune lymphoproliferative syndrome type 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614470","GARD:17262","MEDGEN:382434","UMLS:C2674723","SCTID:723508002","DOID:0110117"],"synonyms":[{"name":"ALPS type 4","type":"exact"},{"name":"ALPS type IV","type":"exact"},{"name":"ALPS4","type":"exact"},{"name":"NRAS autoimmune lymphoproliferative syndrome","type":"exact"},{"name":"RALD","type":"exact"},{"name":"RAS-associated autoimmune leukoproliferative disease","type":"exact"},{"name":"RAS-associated autoimmune leukoproliferative disorder","type":"exact"},{"name":"RAS-associated autoimmune lymphoproliferative syndrome type IV, somatic","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome caused by mutation in NRAS","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome type 4","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome type IV","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome, type 4","type":"related"}],"termid":"MONDO:0013767","terms_by_termid":{"MONDO:0013767":null},"xrefs":{"Monarch":{"xref_id":"0013767"}}}


id: GO:1900810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving helvolic acid.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"},{"relation_name":"is_a","term_name":"acetate ester metabolic process","termid":"GO:1900619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748","GO:0006629"],"is_obsolete":false,"name":"helvolic acid metabolic process","synonyms":[{"name":"Fumigacin metabolic process","type":"related"},{"name":"Fumigacin metabolism","type":"related"},{"name":"helvolic acid metabolism","type":"exact"}],"termid":"GO:1900810"}


id: PBO:0003279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG1 family mitochondrial ATPase (predicted)","termid":"PBO:0003279"}


id: GO:0106246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency or extent of the catalysis of the exonucleolytic cleavage of poly(A) to 5'-AMP.","definition_xrefs":["PMID:29932902","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of poly(A)-specific ribonuclease activity (obsolete GO:0106246)","termid":"GO:0106246"}


id: PBO:0024479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation inhibitor (predicted)","termid":"PBO:0024479"}


id: GO:0098760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-7 stimulus.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-7","synonyms":[{"name":"response to IL-7","type":"exact"}],"termid":"GO:0098760"}


id: PBO:0057459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 578","termid":"PBO:0057459"}


id: PBO:0034147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_mutualism","termid":"PBO:0034147"}


id: SO:0001883
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature translocation where the region contains a transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_translocation","termid":"SO:0001881"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_translocation","synonyms":[{"name":"transcript translocation","type":"exact"}],"termid":"SO:0001883"}


id: GO:0097473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a retinal rod cell, one of the two photoreceptor cell types of the vertebrate retina.","definition_xrefs":["CL:0000604","PMID:17202487","GOC:jc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron apoptotic process","termid":"GO:0051402"},{"relation_name":"is_a","term_name":"retinal cell apoptotic process","termid":"GO:1990009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal rod cell apoptotic process","synonyms":[{"name":"rod photoreceptor apoptotic process","type":"exact"}],"termid":"GO:0097473"}


id: MONDO:0020807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sex cord-stromal tumor that arises from the ovary and is composed entirely of, or in various combinations of, Sertoli cells, Leydig cells, and fibroblast-like cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian sex cord-stromal tumor","termid":"MONDO:0021657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian sertoli-stromal cell tumor","secondary_identifiers":["NCIT:C39966","MEDGEN:309515","UMLS:C1518732"],"synonyms":[{"name":"Ovarian Sertoli-Stromal Cell Tumor","type":"exact"},{"name":"Ovarian Sertoli-Stromal Cell Tumour","type":"exact"},{"name":"Ovarian Sertoli-Stromal Tumor","type":"exact"},{"name":"Ovarian Sertoli-Stromal Tumour","type":"exact"}],"termid":"MONDO:0020807","xrefs":{"Monarch":{"xref_id":"0020807"}}}


id: PBO:0069970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1265, pseudogene","termid":"PBO:0069970"}


id: FYPO:0001920
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein export from nucleus is decreased. Export of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein export from nucleus during vegetative growth","termid":"FYPO:0000345"},{"relation_name":"is_a","term_name":"decreased nuclear export","termid":"FYPO:0000508"},{"relation_name":"is_a","term_name":"decreased protein transport during vegetative growth","termid":"FYPO:0000541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein export from nucleus","synonyms":[{"name":"decreased protein export from nucleus during mitotic cell cycle","type":"related"},{"name":"decreased protein export from nucleus during vegetative growth","type":"exact"},{"name":"reduced protein export from nucleus","type":"exact"}],"termid":"FYPO:0001920"}


id: GO:0034805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzo(a)pyrene-trans-11,12-dihydrodiol = 11,12-dihydroxybenzo(a)pyrene + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete benzo(a)pyrene-trans-11,12-dihydrodiol dehydrogenase activity (obsolete GO:0034805)","termid":"GO:0034805"}


id: FYPO:0006787
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of poly(A)-specific ribonuclease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal 3'-5'-exoribonuclease activity","termid":"FYPO:0002063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abnormal poly(A)-specific ribonuclease activity","termid":"FYPO:0006787"}


id: PBO:0029074
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_sumoylation","termid":"PBO:0029074"}


id: GO:0001937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate or extent of endothelial cell proliferation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell proliferation","termid":"GO:0001936"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"negatively_regulates","term_name":"endothelial cell proliferation","termid":"GO:0001935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endothelial cell proliferation","synonyms":[{"name":"down regulation of endothelial cell proliferation","type":"exact"},{"name":"down-regulation of endothelial cell proliferation","type":"exact"},{"name":"downregulation of endothelial cell proliferation","type":"exact"},{"name":"inhibition of endothelial cell proliferation","type":"narrow"}],"termid":"GO:0001937"}


id: PBO:0086587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; epitope-tagged protein localizes to the cytoplasm; YHR033W has a paralog, PRO1, that arose from the whole genome duplication","termid":"PBO:0086587"}


id: PBO:0091023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type homeobox protein Pi","termid":"PBO:0091023"}


id: FYPO:0008327
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in one or more heterochromatin islands occurs to a greater extent than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K9 trimethylation at heterochromatin island during vegetative growth","termid":"FYPO:0008327"}


id: PBO:0000704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9/signalosome complex subunit Csn3 (predicted)","termid":"PBO:0000704"}


id: PBO:0074965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-7","termid":"PBO:0074965"}


id: MOD:00618
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:299#W"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"},{"relation_name":"is_a","term_name":"carboxylated residue","termid":"MOD:01152"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan carboxylation","synonyms":[{"name":"Carboxy","type":"related"},{"name":"Carboxylation","type":"related"}],"termid":"MOD:00618"}


id: GO:0044831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus modulates the frequency, rate or extent of cytokine production in its host organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host cytokine production (obsolete GO:0044831)","termid":"GO:0044831"}


id: GO:0031153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the slug over time, from its formation to the mature structure. Slug development begins when the aggregate rises upwards to form a finger-shaped structure and ends when culmination begins. Slug development begins after aggregation and ends before culmination in sorocarp development.","definition_xrefs":["GOC:mah","GOC:mtg_sensu","ISBN:0521583640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"socially cooperative development","termid":"GO:0099120"},{"relation_name":"part_of","term_name":"sorocarp development","termid":"GO:0030587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"slug development involved in sorocarp development","synonyms":[{"name":"migratory slug development during sorocarp development","type":"narrow"},{"name":"pseudoplasmodium biosynthesis","type":"exact"},{"name":"pseudoplasmodium formation","type":"exact"},{"name":"slug development during fruiting body development","type":"exact"},{"name":"slug development during sorocarp development","type":"related"},{"name":"standing slug development during sorocarp development","type":"narrow"}],"termid":"GO:0031153"}


id: PBO:0089672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Rrp5","termid":"PBO:0089672"}


id: PBO:0034541
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_iron-sulfur_cluster_binding","termid":"PBO:0034541"}


id: PBO:0063624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1","termid":"PBO:0063624"}


id: PBO:0004160
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.3.13","termid":"PBO:0004160"}


id: PBO:0079326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 14","termid":"PBO:0079326"}


id: PBO:0034226
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_immediately_upstream_of_sequence_of","termid":"PBO:0034226"}


id: GO:0106242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-geranylgeranyl diphosphate = (+)-kolavenyl diphosphate.","definition_xrefs":["RHEA:54676","PMID:29315936","GOC:eab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"kolavenyl diphosphate synthase activity","secondary_identifiers":["EC:5.5.1.29"],"termid":"GO:0106242"}


id: PBO:0070430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome production factor 2 homolog","termid":"PBO:0070430"}


id: GO:0033717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-gluconate + acceptor = 2-dehydro-D-gluconate + reduced acceptor.","definition_xrefs":["RHEA:12769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gluconate dehydrogenase activity","termid":"GO:0008875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"gluconate 2-dehydrogenase (acceptor) activity","secondary_identifiers":["MetaCyc:GLUCONATE-2-DEHYDROGENASE-RXN","EC:1.1.99.3"],"synonyms":[{"name":"2-ketogluconate reductase activity","type":"broad"},{"name":"D-gluconate dehydrogenase activity","type":"related"},{"name":"D-gluconate dehydrogenase, 2-keto-D-gluconate-yielding activity","type":"related"},{"name":"D-gluconate:(acceptor) 2-oxidoreductase activity","type":"related"},{"name":"D-gluconate:acceptor 2-oxidoreductase activity","type":"related"},{"name":"gluconate oxidase activity","type":"related"},{"name":"gluconic acid dehydrogenase activity","type":"related"},{"name":"gluconic dehydrogenase activity","type":"related"}],"termid":"GO:0033717"}


id: PBO:0059127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-methylpurine DNA glycosylase","termid":"PBO:0059127"}


id: MONDO:0017683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"homocystinuria without methylmalonic aciduria","termid":"MONDO:0018964"},{"relation_name":"is_a","term_name":"methylmalonic aciduria and/or homocystinuria, cblD type","termid":"MONDO:0100463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005570","MONDO:0002280","MONDO:0006025","MONDO:0004736"],"is_obsolete":false,"name":"methylcobalamin deficiency type cblDv1","secondary_identifiers":["UMLS:C5679956","GARD:17385","Orphanet:308380","MEDGEN:1826168"],"synonyms":[{"name":"functional methionine synthase deficiency type cblDv1","type":"exact"}],"termid":"MONDO:0017683","xrefs":{"Monarch":{"xref_id":"0017683"}}}


id: GO:0035197
data:
  {"annotated_genes":["SJAG_03042","SJAG_04061","SJAG_02621"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90642,114202,120123],"is_not":false,"summary":null,"term":"GO:0035197"}]},"cv_name":"molecular_function","definition":"Binding to a small interfering RNA, a 21-23 nucleotide RNA that is processed from double stranded RNA (dsRNA) by an RNAse enzyme.","definition_xrefs":["PMID:15066283","PMID:15066275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory RNA binding","termid":"GO:0061980"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03042":null,"SJAG_04061":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"siRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"small interfering RNA binding","type":"exact"}],"termid":"GO:0035197","terms_by_termid":{"GO:0035197":null}}


id: PBO:0075786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 8C, pseudogene","termid":"PBO:0075786"}


id: GO:0075156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its G protein-coupled receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of G protein-coupled receptor signaling pathway in response to host (obsolete GO:0075156)","synonyms":[{"name":"regulation of G-protein coupled receptor protein signaling pathway in response to host","type":"exact"},{"name":"regulation of G-protein coupled receptor protein signalling pathway in response to host","type":"exact"},{"name":"regulation of symbiont G-protein coupled receptor protein-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075156"}


id: PBO:0042996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint with forkhead and ring finger domains","termid":"PBO:0042996"}


id: PBO:0086106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for assembly of succinate dehydrogenase; interacts with flavinylated Sdh1p and may function as a chaperone for free Sdh1p, protecting its FAD cofactor from redox reactions before assembly of the complex; soluble protein of the mitochondrial matrix; respiratory defect of null mutant is functionally complemented by Drosophila and human orthologs","termid":"PBO:0086106"}


id: PBO:0040755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BDNF antisense RNA","termid":"PBO:0040755"}


id: SO:0002159
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved Cdc48/p97 interaction motif with strict consensus sequence F[PI]GKG[TK][RK]LG[GT] and relaxed consensus sequence FXGKGX[RK]LG.","definition_xrefs":["PMID:27655872","PMID:17083136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_conserved_motif","termid":"SO:0100017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"SHP_box","synonyms":[{"name":"SHP box","type":"exact"}],"termid":"SO:0002159"}


id: MONDO:0007898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte nuclear appendages, hereditary prevalence of","secondary_identifiers":["OMIM:151500","MEDGEN:320594","MESH:C563626","UMLS:C1835405"],"synonyms":[{"name":"leukocyte nuclear appendages, hereditary prevalence of","type":"exact"}],"termid":"MONDO:0007898","xrefs":{"Monarch":{"xref_id":"0007898"}}}


id: MONDO:0016023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ocular coloboma (obsolete MONDO:0016023)","termid":"MONDO:0016023","xrefs":{"Monarch":{"xref_id":"0016023"}}}


id: PBO:0090845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex WD repeat protein Prp5","termid":"PBO:0090845"}


id: PBO:0048336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 47","termid":"PBO:0048336"}


id: PR:O74735
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atx1 gene.","definition_xrefs":["UniProtKB:O74735","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal homeostasis factor atx1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.10c","synonyms":[{"name":"Spom972h-atx1","type":"exact"}],"termid":"PR:O74735"}


id: GO:1904992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of adenylate cyclase-inhibiting dopamine receptor signaling pathway.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:26554819","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of dopamine receptor signaling pathway","termid":"GO:0060161"},{"relation_name":"is_a","term_name":"regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","termid":"GO:1904990"},{"relation_name":"positively_regulates","term_name":"adenylate cyclase-inhibiting dopamine receptor signaling pathway","termid":"GO:0007195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","synonyms":[{"name":"activation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"narrow"},{"name":"activation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"narrow"},{"name":"activation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"narrow"},{"name":"activation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"activation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"narrow"},{"name":"positive regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"positive regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"positive regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"positive regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"},{"name":"up regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"exact"},{"name":"up regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"up regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"up regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"up regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"},{"name":"up-regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"exact"},{"name":"up-regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"up-regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"up-regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"up-regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"},{"name":"upregulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"exact"},{"name":"upregulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"upregulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"upregulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"upregulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:1904992"}


id: GO:2000348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signaling via the CD40 signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"CD40 signaling pathway","termid":"GO:0023035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of CD40 signaling pathway","synonyms":[{"name":"regulation of CD40 signalling pathway","type":"exact"}],"termid":"GO:2000348"}


id: MONDO:0011510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bohring-Opitz syndrome is characterized by intrauterine growth retardation (IUGR), failure to thrive, facial dysmorphism (prominent metopic suture and forehead nevus flammeus, a low frontal and temporal hairline with hirsutism, puffy cheeks, upslanting palpebral fissures, exophthalmos, hypertelorism, cleft lip and palate, retrognathia and low set ears), flexion deformities of the elbows and wrists, camptodactyly, ulnar deviation of the fingers, foot anomalies and severe developmental delay. Less than 20 patients have been described so far. Although the large majority of reported cases occurred sporadically, autosomal recessive inheritance has also been reported.","definition_xrefs":["Orphanet:97297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"autosomal dominant syndromic intellectual disability","termid":"MONDO:0100601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002320"],"is_obsolete":false,"name":"Bohring-Opitz syndrome","secondary_identifiers":["NCIT:C131533","NORD:1981","MESH:C537419","UMLS:C0796232","GARD:10140","SCTID:720565000","MEDGEN:208678","OMIM:605039"],"synonyms":[{"name":"BOHRING-Opitz syndrome","type":"related"},{"name":"BOPS","type":"related"},{"name":"Bohring syndrome","type":"exact"},{"name":"Bohring-Opitz syndrome","type":"exact"},{"name":"Bos syndrome","type":"exact"},{"name":"C-like syndrome","type":"exact"},{"name":"Oberklaid-Danks syndrome","type":"exact"},{"name":"Opitz trigonocephaly-like syndrome","type":"exact"}],"termid":"MONDO:0011510","xrefs":{"Monarch":{"xref_id":"0011510"}}}


id: PBO:0086671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology comparisons and RT-PCR; identified in a screen for mutants with decreased levels of rDNA transcription","termid":"PBO:0086671"}


id: PBO:0076268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWT1 RNA endoribonuclease homolog","termid":"PBO:0076268"}


id: _global:directly_regulates
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p directly regulates q iff p is immediately causally upstream of q and p regulates q.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"immediately_causally_upstream_of","termid":"_global:immediately_causally_upstream_of"},{"relation_name":"is_a","term_name":"regulates","termid":"_global:regulates"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_regulates","secondary_identifiers":["RO:0002578"],"termid":"_global:directly_regulates"}


id: GO:0048325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of axial mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axial mesodermal cell fate determination","termid":"GO:0048324"},{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate determination","termid":"GO:0048335"},{"relation_name":"negatively_regulates","term_name":"axial mesodermal cell fate determination","termid":"GO:0048323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of axial mesodermal cell fate determination","synonyms":[{"name":"down regulation of axial mesodermal cell fate determination","type":"exact"},{"name":"down-regulation of axial mesodermal cell fate determination","type":"exact"},{"name":"downregulation of axial mesodermal cell fate determination","type":"exact"},{"name":"inhibition of axial mesodermal cell fate determination","type":"narrow"}],"termid":"GO:0048325"}


id: GO:0075288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sporangiospore formation, a process in which sporangiospores, a type of asexual spore found in fungi, are formed. Sporangiospores are formed within sac-like structure, the sporangium, following the division of the cytoplasm.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043944"},{"relation_name":"is_a","term_name":"regulation of sporangiospore formation","termid":"GO:0075286"},{"relation_name":"negatively_regulates","term_name":"sporangiospore formation","termid":"GO:0034300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sporangiospore formation","termid":"GO:0075288"}


id: PBO:0029909
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_terbinafine","termid":"PBO:0029909"}


id: FYPO:0005002
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated, and the nucleus undergoes oscillatory movement around its normal location.","definition_xrefs":["PMID:16611238","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"elongated vegetative cell with oscillating nucleus","synonyms":[{"name":"elongated cell with oscillating nucleus during vegetative growth","type":"exact"},{"name":"elongated vegetative cell with oscillating nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005002"}


id: PBO:0030036
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_minichromosome_loss_upon_segregation_during_vegetative_growth","termid":"PBO:0030036"}


id: MONDO:0003190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the middle ear","direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck carcinoma","termid":"MONDO:0002038"},{"relation_name":"is_a","term_name":"middle ear cancer","termid":"MONDO:0003275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"middle ear carcinoma","secondary_identifiers":["MEDGEN:233189","NCIT:C6089","UMLS:C1334760","DOID:4893"],"synonyms":[{"name":"carcinoma of middle Ear","type":"exact"},{"name":"carcinoma of middle ear","type":"exact"},{"name":"carcinoma of the middle Ear","type":"exact"},{"name":"carcinoma of the middle ear","type":"exact"},{"name":"middle Ear carcinoma","type":"exact"},{"name":"middle ear carcinoma","type":"exact"}],"termid":"MONDO:0003190","xrefs":{"Monarch":{"xref_id":"0003190"}}}


id: PBO:0038890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adducin 3","termid":"PBO:0038890"}


id: PBO:0116714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCDH eRNA associated with R-loop formation 1","termid":"PBO:0116714"}


id: GO:0008231
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of a heterodimer of Ecdysone receptor (EcR) and ultraspiracle (usp) plus an associated corepressor such as SMRTER, which represses transcription of target genes.","definition_xrefs":["PMID:10488333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ecdysone receptor holocomplex","termid":"GO:0008230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"repressor ecdysone receptor complex","synonyms":[{"name":"repressor ecdysone receptor holocomplex","type":"related"}],"termid":"GO:0008231"}


id: GO:0100067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any canonical Wnt signaling pathway process that positively_regulates spinal cord association neuron differentiation.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of spinal cord association neuron differentiation by canonical Wnt signaling pathway (obsolete GO:0100067)","termid":"GO:0100067"}


id: FYPO:0005839
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of medial membrane band assembly is increased. Medial membrane band assembly is the assembly of a sterol-rich region of the plasma membrane at the cell surface overlying the contractile ring.","definition_xrefs":["PomBase:mah","GO:0032130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis during vegetative growth","termid":"FYPO:0000032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0000032","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased rate of medial membrane band assembly","synonyms":[{"name":"increased rate of medial membrane band assembly during mitotic cell cycle","type":"related"},{"name":"increased rate of medial membrane band assembly during vegetative growth","type":"exact"},{"name":"increased rate of medial membrane band formation","type":"exact"}],"termid":"FYPO:0005839"}


id: MONDO:0041775
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"iris disorder","termid":"MONDO:0002289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"intraoperative floppy iris syndrome","secondary_identifiers":["MEDGEN:739048","SCTID:418801006","UMLS:C1688637"],"synonyms":[{"name":"intraoperative floppy iris syndrome","type":"exact"}],"termid":"MONDO:0041775","xrefs":{"Monarch":{"xref_id":"0041775"}}}


id: PBO:0080317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 81 pseudogene","termid":"PBO:0080317"}


id: PBO:0068674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 55, pseudogene","termid":"PBO:0068674"}


id: PBO:0061191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuromedin U receptor 1","termid":"PBO:0061191"}


id: GO:0060578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of superior vena cava generated and organized. The superior vena cava is a blood vessel that transports blood from the upper body to the heart.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venous blood vessel morphogenesis","termid":"GO:0048845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior vena cava morphogenesis","termid":"GO:0060578"}


id: PBO:0067446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 568, pseudogene","termid":"PBO:0067446"}


id: GO:0019858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cytosine, 4-amino-2-hydroxypyrimidine, a pyrimidine derivative that is one of the five main bases found in nucleic acids; it occurs widely in cytidine derivatives.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cytosine metabolic process","synonyms":[{"name":"cytosine metabolism","type":"exact"}],"termid":"GO:0019858"}


id: MONDO:0006195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign nodular lesion protruding above the surface of the endometrium. It is composed of a fibrous stroma that contains thick-walled blood vessels and dilated endometrial glands. Polypectomy is the treatment of choice. Only few cases with recurrence have been reported.","definition_xrefs":["NCIT:C6433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrial disorder","termid":"MONDO:0000931"},{"relation_name":"is_a","term_name":"uterine polyp","termid":"MONDO:0004701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometrial polyp","secondary_identifiers":["UMLS:C1704273","EFO:1000237","MEDGEN:312370"],"synonyms":[{"name":"endometrial polyp","type":"exact"},{"name":"endometrial stromal polyp","type":"exact"},{"name":"endometrium polyp","type":"exact"},{"name":"polyp of endometrium","type":"exact"},{"name":"polyp of the endometrium","type":"exact"},{"name":"polyp, endometrial stromal, benign","type":"exact"}],"termid":"MONDO:0006195","xrefs":{"Monarch":{"xref_id":"0006195"}}}


id: PBO:0076554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAX1BP1 antisense RNA 1","termid":"PBO:0076554"}


id: GO:0050408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [pyruvate kinase] phosphate + H2O = [pyruvate kinase] + phosphate.","definition_xrefs":["EC:3.1.3.49","MetaCyc:PYRUVATE-KINASE-PHOSPHATASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0004721","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"[pyruvate kinase]-phosphatase activity","synonyms":[{"name":"ATP:pyruvate 2-O-phosphotransferase-phosphate phosphohydrolase activity","type":"related"},{"name":"pyruvate kinase phosphatase activity","type":"related"},{"name":"pyruvate kinase-phosphatase activity","type":"related"}],"termid":"GO:0050408"}


id: FYPO:0001422
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular metabolism phenotype observed in the vegetative growth phase of the life cycle in which the observed occurrence of protein processing is decreased.","definition_xrefs":["PMID:19520858","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein processing during vegetative growth","termid":"FYPO:0001421"},{"relation_name":"is_a","term_name":"decreased proteolysis during vegetative growth","termid":"FYPO:0005443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0006551","FYPO:0002494","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein processing during vegetative growth","synonyms":[{"name":"decreased Sre1 cleavage","type":"narrow"},{"name":"decreased protein cleavage during vegetative growth","type":"related"},{"name":"decreased protein maturation by peptide bond cleavage during vegetative growth","type":"exact"},{"name":"decreased protein maturation by peptide bond hydrolysis during vegetative growth","type":"exact"},{"name":"decreased protein processing during mitotic cell cycle","type":"related"},{"name":"reduced protein processing during vegetative growth","type":"exact"}],"termid":"FYPO:0001422"}


id: PBO:0067210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 275, pseudogene","termid":"PBO:0067210"}


id: GO:0010890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of sequestering of triglyceride. Triglyceride sequestration is the process of binding or confining any triester of glycerol such that it is separated from other components of a biological system.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid storage","termid":"GO:0010884"},{"relation_name":"is_a","term_name":"regulation of triglyceride storage","termid":"GO:0010889"},{"relation_name":"positively_regulates","term_name":"triglyceride storage","termid":"GO:0030730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of triglyceride storage","synonyms":[{"name":"positive regulation of sequestering of triacylglycerol","type":"exact"},{"name":"positive regulation of sequestering of triglyceride","type":"exact"},{"name":"positive regulation of triglyceride sequestration","type":"exact"}],"termid":"GO:0010890"}


id: PBO:0040804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic helix-loop-helix family member e41","termid":"PBO:0040804"}


id: GO:0016130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phytosteroids, steroids that differ from animal steroids in having substitutions at C24 and/or a double bond at C22. Phytosteroids are so named because they occur in higher plants; some, notably ergosterol, are also found in fungi.","definition_xrefs":["GOC:go_curators","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"phytosteroid metabolic process","termid":"GO:0016128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phytosteroid catabolic process","synonyms":[{"name":"phytosteroid breakdown","type":"exact"},{"name":"phytosteroid catabolism","type":"exact"},{"name":"phytosteroid degradation","type":"exact"}],"termid":"GO:0016130"}


id: GO:0031390
data:
  {"annotated_genes":["SJAG_00806","SJAG_02182","SJAG_00729","SJAG_01010","SJAG_02610","SJAG_02373","SJAG_00272"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[63461,71958,74412,78880,79568,95840,114727],"is_not":false,"summary":null,"term":"GO:0031390"}]},"cv_name":"cellular_component","definition":"A heptameric complex related to replication factor C, which loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA and plays a vital role in chromosome cohesion. In Saccharomyces the subunits are known as Ctf18p, Rfc2p, Rfc3p, Rfc4p, Rfc5p, Dcc1p, and Ctf8p.","definition_xrefs":["PMID:14614842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_00806":null,"SJAG_01010":null,"SJAG_02182":null,"SJAG_02373":null,"SJAG_02610":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"Ctf18 RFC-like complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Ctf18-RFC","type":"exact"},{"name":"Ctf18-RLC","type":"exact"},{"name":"RFC (Ctf18)","type":"exact"}],"termid":"GO:0031390","terms_by_termid":{"GO:0031390":null}}


id: PBO:0085229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Part of the CCR4-NOT transcriptional regulatory complex; involved in controlling mRNA initiation, elongation, and degradation; contains a PH-like domain; CAF120 has a paralog, SKG3, that arose from the whole genome duplication","termid":"PBO:0085229"}


id: PBO:0077111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 17B pseudogene 1","termid":"PBO:0077111"}


id: PBO:0052965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L1CAM antisense RNA 1","termid":"PBO:0052965"}


id: GO:0061688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A glycolytic process in which the glucose is catabolized to pyruvate by first entering the Entner-Doudoroff pathway to yield pyruvate and glyceraldehyde-3-phosphate. The glyceraldehyde-3-phosphate is subsequently converted to pyruvate by the core glycolytic enzymes.","definition_xrefs":["GOC:dph","PMID:9657988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolytic process","termid":"GO:0006096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0055086","GO:0006091","GO:0044281"],"is_obsolete":false,"name":"glycolytic process via Entner-Doudoroff Pathway","synonyms":[{"name":"gluconate pathway","type":"related"}],"termid":"GO:0061688"}


id: GO:0030817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cAMP biosynthetic process (obsolete GO:0030817)","synonyms":[{"name":"regulation of 3',5' cAMP biosynthesis","type":"exact"},{"name":"regulation of 3',5' cAMP biosynthetic process","type":"exact"},{"name":"regulation of 3',5'-cAMP biosynthesis","type":"exact"},{"name":"regulation of 3',5'-cAMP biosynthetic process","type":"exact"},{"name":"regulation of adenosine 3',5'-cyclophosphate biosynthesis","type":"exact"},{"name":"regulation of adenosine 3',5'-cyclophosphate biosynthetic process","type":"exact"},{"name":"regulation of cAMP anabolism","type":"exact"},{"name":"regulation of cAMP biosynthesis","type":"exact"},{"name":"regulation of cAMP formation","type":"exact"},{"name":"regulation of cAMP synthesis","type":"exact"},{"name":"regulation of cyclic AMP biosynthesis","type":"exact"},{"name":"regulation of cyclic AMP biosynthetic process","type":"exact"}],"termid":"GO:0030817"}


id: PBO:0001589
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucose Insensitive Transcription","termid":"PBO:0001589"}


id: PBO:0090751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho5","termid":"PBO:0090751"}


id: GO:0048767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the root hair grows longer.","definition_xrefs":["PMID:12468740","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"root hair cell development","termid":"GO:0080147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root hair elongation","termid":"GO:0048767"}


id: PBO:0077314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM51 antisense RNA 1","termid":"PBO:0077314"}


id: MONDO:0012540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any age-related macular degeneration in which the cause of the disease is a mutation in the CFH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age-related macular degeneration","termid":"MONDO:0005150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"age related macular degeneration 4","secondary_identifiers":["MEDGEN:339914","UMLS:C1853147","DOID:0110017","MESH:C565196","OMIM:610698"],"synonyms":[{"name":"ARMD4","type":"exact"},{"name":"CFH age-related macular degeneration","type":"exact"},{"name":"age related macular degeneration type 4","type":"exact"},{"name":"age-related macular degeneration caused by mutation in CFH","type":"exact"},{"name":"macular Degeneration, age-related, type 4","type":"exact"},{"name":"macular degeneration, age-related, 4","type":"related"}],"termid":"MONDO:0012540","xrefs":{"Monarch":{"xref_id":"0012540"}}}


id: MONDO:0004630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"psychotic disorder","termid":"MONDO:0005485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"substance-induced psychosis","secondary_identifiers":["UMLS:C0033941","ICD9:293.89","DOID:8646","MEDGEN:18746"],"termid":"MONDO:0004630","xrefs":{"Monarch":{"xref_id":"0004630"}}}


id: MONDO:0015988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multicystic dysplastic kidney (MCDK) is a congenital anomaly of the kidney and urinary tract (CAKUT) in which one or both kidneys (unilateral or bilateral MCDK respectively) are large, distended by multiple cysts, and non-functional.","definition_xrefs":["Orphanet:1851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystic kidney disease","termid":"MONDO:0002473"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"multicystic dysplastic kidney","secondary_identifiers":["icd11.foundation:1178642763","GARD:18748","MESH:D021782","ICD9:753.19","NCIT:C123031","UMLS:C3714581","MEDGEN:811388","SCTID:204962002","NANDO:2200158"],"synonyms":[{"name":"MCDK","type":"exact"},{"name":"multicystic renal dysplasia","type":"exact"}],"termid":"MONDO:0015988","xrefs":{"Monarch":{"xref_id":"0015988"}}}


id: GO:0018817
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-2-oxohept-3-ene-1,7-dioate + H2O = 2,4-dihydroxy-hept-trans-2-ene-1,7-dioate.","definition_xrefs":["UM-BBD_reactionID:r0369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-oxo-hept-3-ene-1,7-dioate hydratase activity","secondary_identifiers":["MetaCyc:HYDROXYHEPTA-DIENEDIOATE-HYDROXY-RXN","RHEA:42072"],"synonyms":[{"name":"2-oxo-hepta-3-ene-1,7-dioate hydratase activity","type":"exact"},{"name":"2-oxo-hepta-3-ene-1,7-dioic acid hydratase activity","type":"exact"},{"name":"HpaH","type":"related"}],"termid":"GO:0018817"}


id: PBO:0049572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 9","termid":"PBO:0049572"}


id: PBO:0001597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase subunit K (predicted)","termid":"PBO:0001597"}


id: PBO:0034324
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_developmental_potential_involving","termid":"PBO:0034324"}


id: GO:0046535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for a umami taste stimulus to be received and converted to a molecular signal. Umami taste is the savory taste of meats and other foods that are rich in glutamates.","definition_xrefs":["GOC:dos","PMID:11894099","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus involved in sensory perception of taste","termid":"GO:0050912"},{"relation_name":"part_of","term_name":"sensory perception of umami taste","termid":"GO:0050917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of chemical stimulus involved in sensory perception of umami taste","synonyms":[{"name":"perception of umami taste, detection of chemical stimulus","type":"exact"},{"name":"perception of umami taste, sensory transduction of chemical stimulus","type":"exact"},{"name":"sensory detection of chemical stimulus during perception of umami taste","type":"exact"},{"name":"sensory detection of umami taste","type":"exact"},{"name":"sensory transduction of chemical stimulus during perception of umami taste","type":"exact"},{"name":"sensory transduction of umami taste","type":"exact"},{"name":"umami taste detection","type":"exact"}],"termid":"GO:0046535"}


id: RO:0002208
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A parasite that kills or sterilizes its host","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parasitoid_of","termid":"RO:0002208"}


id: MONDO:0958300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A round cell sarcoma with EWSR1-non-ETS fusion that is characterized by the presence of EWSR1-PATZ1 gene fusion.","definition_xrefs":["DOID:0081409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"round cell sarcoma with EWSR1-non-ETS fusion","termid":"MONDO:0958160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"round cell sarcoma with EWSR1-PATZ1 gene fusion","secondary_identifiers":["MEDGEN:1791494","UMLS:C5555053"],"termid":"MONDO:0958300","xrefs":{"Monarch":{"xref_id":"0958300"}}}


id: GO:0006450
data:
  {"annotated_genes":["SJAG_03545","SJAG_02015","SJAG_04756","SJAG_04738","SJAG_03677","SJAG_04452","SJAG_04700","SJAG_04285","SJAG_01259","SJAG_01797","SJAG_00443","SJAG_03094","SJAG_01248","SJAG_02428","SJAG_00579"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70769,80736],"is_not":false,"summary":null,"term":"GO:0006450"},{"annotations":[64442,65254,62000,65227,59169,57079,57387,58231,68273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106074"},{"annotations":[112129,97366,115968,111464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140018"}]},"cv_name":"biological_process","definition":"Any process that modulates the ability of the translational apparatus to interpret the genetic code.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00443":null,"SJAG_00579":null,"SJAG_01248":null,"SJAG_01259":null,"SJAG_01797":null,"SJAG_02015":null,"SJAG_02428":null,"SJAG_03094":null,"SJAG_03545":null,"SJAG_03677":null,"SJAG_04285":null,"SJAG_04452":null,"SJAG_04700":null,"SJAG_04738":null,"SJAG_04756":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of translational fidelity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0000029"],"synonyms":[{"name":"regulation of translational accuracy","type":"exact"}],"termid":"GO:0006450","terms_by_termid":{"GO:0006450":null,"GO:0106074":null,"GO:0140018":null}}


id: PBO:0061559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NT5DC1 pseudogene 2","termid":"PBO:0061559"}


id: PBO:0042407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC20 divergent transcript","termid":"PBO:0042407"}


id: PBO:0040245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 4A cysteine peptidase","termid":"PBO:0040245"}


id: GO:0034679
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha9 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"integrin alpha9-beta1 complex","synonyms":[{"name":"ITGA9-ITGB1 complex","type":"narrow"},{"name":"alpha9-beta1 integrin complex","type":"exact"}],"termid":"GO:0034679"}


id: PBO:0066764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 62","termid":"PBO:0066764"}


id: PBO:0039034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 11","termid":"PBO:0039034"}


id: MONDO:0002265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Motor behavior that is repetitive, often seemingly driven, and nonfunctional. This behavior markedly interferes with normal activities or results in severe bodily self-injury. The behavior is not due to the direct physiological effects of a substance or a general medical condition. (dsm-iv, 1994)","definition_xrefs":["MESH:D019956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specific developmental disorder","termid":"MONDO:0000592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stereotypic movement disorder","secondary_identifiers":["SCTID:5507002","DOID:2303","MEDGEN:21320","ICD9:307.3","UMLS:C0038273"],"synonyms":[{"name":"stereotyped repetitive movements","type":"exact"},{"name":"stereotyped repetitive movements NOS (finding)","type":"exact"},{"name":"stereotypy habit disorder","type":"exact"}],"termid":"MONDO:0002265","xrefs":{"Monarch":{"xref_id":"0002265"}}}


id: PR:Q10354
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 35 member C2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C22E12.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.01","secondary_identifiers":["UniProtKB:Q10354"],"synonyms":[{"name":"Spom972h-SLC35C2","type":"exact"}],"termid":"PR:Q10354"}


id: PBO:0058619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6751","termid":"PBO:0058619"}


id: PR:Q9USJ2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4B3.02c gene.","definition_xrefs":["UniProtKB:Q9USJ2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein got1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.02c","synonyms":[{"name":"Golgi transport protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC4B3.02c","type":"exact"}],"termid":"PR:Q9USJ2"}


id: GO:0031285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sorocarp stalk cell differentiation. An example of this process is found in Dictyostelium discoideum.","definition_xrefs":["GOC:kp","PMID:4338436","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"sorocarp stalk cell differentiation","termid":"GO:0031149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sorocarp stalk cell differentiation","synonyms":[{"name":"regulation of stalk cell differentiation","type":"exact"}],"termid":"GO:0031285"}


id: GO:0048065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process during courtship where the male insect extends his wings. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male courtship behavior","termid":"GO:0008049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male courtship behavior, veined wing extension","synonyms":[{"name":"male courtship behavior, wing extension","type":"broad"},{"name":"male courtship behaviour, veined wing extension","type":"exact"},{"name":"male courtship behaviour, wing extension","type":"broad"}],"termid":"GO:0048065"}


id: PBO:0004251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aconitate hydratase/mitochondrial ribosomal protein subunit L49, fusion protein (predicted)","termid":"PBO:0004251"}


id: MONDO:0001539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually small tearing of the retina occurring when the vitreous separates from the retina. It may lead to retinal detachment. Symptoms include flashes and floaters.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal detachment","termid":"MONDO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal perforation","secondary_identifiers":["MESH:D012167","MEDGEN:48435","DOID:12514","UMLS:C0035321","SCTID:232003005"],"synonyms":[{"name":"retinal break","type":"exact"},{"name":"retinal dialysis","type":"exact"},{"name":"retinal tear","type":"exact"}],"termid":"MONDO:0001539","xrefs":{"Monarch":{"xref_id":"0001539"}}}


id: MONDO:0044710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma arising from the lip or the oral cavity. The oral cavity squamous cell carcinoma usually arises from the buccal mucosa, tongue, or gums. It occurs predominantly in adults who use tobacco and alcohol and has a tendency to metastasize early to lymph nodes.","definition_xrefs":["NCIT:C42690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"},{"relation_name":"is_a","term_name":"lip and oral cavity carcinoma","termid":"MONDO:0023644"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lip and oral cavity squamous cell carcinoma","secondary_identifiers":["MEDGEN:124714","GARD:22046","Orphanet:502369","UMLS:C0280297"],"synonyms":[{"name":"lip and oral cavity squamous cell cancer","type":"exact"},{"name":"lip and oral cavity squamous cell carcinoma","type":"exact"},{"name":"lip/oral cavity squam. cell car.","type":"exact"},{"name":"squamous cell carcinoma of oral cavity and lip","type":"related"}],"termid":"MONDO:0044710","xrefs":{"Monarch":{"xref_id":"0044710"}}}


id: PBO:0029255
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_DNA_replication","termid":"PBO:0029255"}


id: GO:1900067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to alkalinity.","definition_xrefs":["PMID:12509465","PMID:17023428","GOC:TermGenie","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cellular response to alkaline pH","termid":"GO:0071469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to alkaline pH","synonyms":[{"name":"regulation of cellular response to alkalinity","type":"broad"},{"name":"regulation of cellular response to basic pH","type":"exact"}],"termid":"GO:1900067"}


id: MONDO:0019737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The syndromes of microangiopathic hemolytic anemia, thrombocytopenia, and variable signs of organ impairment, due to platelet aggregation in the microcirculation.","definition_xrefs":["NCIT:C62605"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"blood coagulation disease","termid":"MONDO:0001531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombotic microangiopathy","secondary_identifiers":["UMLS:C2717961","Orphanet:93573","GARD:19227","MEDGEN:403479","MedDRA:10043645","SCTID:126729006","MESH:D057049","ICD9:446.6","ICD10CM:M31.1"],"termid":"MONDO:0019737","xrefs":{"Monarch":{"xref_id":"0019737"}}}


id: GO:0060062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of the specialized region at the dorsal lip of the blatopore of the embryo that acts as the main signaling center establishing the vertebrate body plan.","definition_xrefs":["GOC:dph","PMID:9442883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Spemann organizer formation","termid":"GO:0060061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Spemann organizer formation at the dorsal lip of the blastopore","synonyms":[{"name":"Spemann's organizer formation at the dorsal lip of the blastopore","type":"exact"},{"name":"Spemann-Mangold organizer formation at the dorsal lip of the blastopore","type":"exact"}],"termid":"GO:0060062"}


id: PBO:0054067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1414","termid":"PBO:0054067"}


id: PBO:0091325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial electron transfer flavoprotein-ubiquinone oxidoreductase Cir2","termid":"PBO:0091325"}


id: PBO:0091506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromeric lncRNA","termid":"PBO:0091506"}


id: MONDO:1011225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Entropion that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entropion, non-human animal","termid":"MONDO:1010323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"entropion, dog","secondary_identifiers":["OMIA:000337-9615"],"termid":"MONDO:1011225","xrefs":{"Monarch":{"xref_id":"1011225"}}}


id: PR:O42927
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16C6.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C6.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.03c","synonyms":[{"name":"Spom972h-SPBC16C6.03c","type":"exact"}],"termid":"PR:O42927"}


id: GO:0050531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(alpha-D-mannosyl)-3-phosphoglycerate + H2O = 2-(alpha-D-mannosyl)-D-glycerate + phosphate.","definition_xrefs":["RHEA:19309","EC:3.1.3.70"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"mannosyl-3-phosphoglycerate phosphatase activity","secondary_identifiers":["KEGG_REACTION:R05790","MetaCyc:3.1.3.70-RXN"],"synonyms":[{"name":"alpha-D-mannosyl-3-phosphoglycerate phosphohydrolase activity","type":"related"}],"termid":"GO:0050531"}


id: FYPO:0007826
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to leucine starvation is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah","PMID:33534698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during cellular response to amino acid starvation","termid":"FYPO:0007825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein level during cellular response to leucine starvation","synonyms":[{"name":"decreased protein accumulation during cellular response to leucine starvation","type":"related"},{"name":"decreased protein level during cellular response to leucine starvation during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to leucine starvation during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to leucine starvation","type":"exact"}],"termid":"FYPO:0007826"}


id: GO:0141133
data:
  {"annotated_genes":["SJAG_02467"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59846],"is_not":false,"summary":null,"term":"GO:0141133"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-[(3S)-amino-3-carboxypropyl]-L-histidyl-[translation elongation factor 2] + 4 S-adenosyl-L-methionine = diphthine methyl ester-[translation elongation factor 2] + 3 H+ + 4 S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:24739148","RHEA:42652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methyltransferase activity","termid":"GO:0008276"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02467":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0008276","GO:0140096","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"diphthine methyl ester synthase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:RXN-15775","Reactome:R-HSA-5358484","EC:2.1.1.314"],"termid":"GO:0141133","terms_by_termid":{"GO:0141133":null}}


id: GO:0010809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of synaptic vesicle priming. Synaptic vesicle priming is the formation of SNARE-containing complexes, bringing synaptic vesicle membrane and plasma membranes into close proximity and thereby facilitating membrane fusion.","definition_xrefs":["GOC:tb","PMID:15489511","GOC:kmvs","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic vesicle priming","termid":"GO:0010807"},{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"negative regulation of synaptic vesicle exocytosis","termid":"GO:2000301"},{"relation_name":"negatively_regulates","term_name":"synaptic vesicle priming","termid":"GO:0016082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192","GO:0044085","GO:0023052","GO:0065003"],"is_obsolete":false,"name":"negative regulation of synaptic vesicle priming","termid":"GO:0010809"}


id: MONDO:0008744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alar cartilages hypoplasia- coloboma- telecanthus is a very rare dysmorphic disorder characterized by hypoplasia and coloboma of the alar cartilages and telecanthus described in 2 sisters. No new cases with similar features have been reported since 1976.","definition_xrefs":["Orphanet:2007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alar cartilages hypoplasia-coloboma-telecanthus syndrome","secondary_identifiers":["MEDGEN:348504","UMLS:C1859964","OMIM:203000","GARD:588","MESH:C535967"],"synonyms":[{"name":"alar-nasal cartilages, coloboma of, with telecanthus","type":"related"},{"name":"coloboma of alar-nasal cartilages with telecanthus","type":"related"},{"name":"frontonasal dysplasia with alar clefts","type":"related"}],"termid":"MONDO:0008744","xrefs":{"Monarch":{"xref_id":"0008744"}}}


id: GO:0160095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of insect pharynx over time, from its formation to the mature structure.","definition_xrefs":["PMID:10952900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharynx development","termid":"GO:0060465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"insect pharynx development","termid":"GO:0160095"}


id: GO:0030602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the lysis of peptide bonds with broad specificity similar to that of pepsin A. Clots milk by cleavage of a single Ser-Phe-l-Met-Ala bond in kappa-casein.","definition_xrefs":["EC:3.4.23.4"],"gene_count":0,"genotype_count":0,"name":"obsolete chymosin activity (obsolete GO:0030602)","synonyms":[{"name":"chymosin activity","type":"exact"},{"name":"rennin","type":"related"},{"name":"rennin (but this should be avoided since it leads to confusion with renin)","type":"related"}],"termid":"GO:0030602"}


id: MONDO:0006515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute inflammatory process that leads to necrosis of the pancreatic parenchyma. Signs and symptoms include severe abdominal pain, nausea, vomiting, diarrhea, fever, and shock. Causes include alcohol consumption, presence of gallstones, trauma, and drugs.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatitis","termid":"MONDO:0004982"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"acute pancreatitis","secondary_identifiers":["Wikipedia:Acute_pancreatitis","HP:0001735","UMLS:C0001339","NCIT:C95437","SCTID:7881005","ICD9:577.0","MEDGEN:7872","DOID:2913","EFO:1000652","icd11.foundation:698285441"],"synonyms":[{"name":"acute pancreatitis (disorder) [ambiguous]","type":"exact"},{"name":"pancreatitis, acute","type":"exact"}],"termid":"MONDO:0006515","xrefs":{"Monarch":{"xref_id":"0006515"}}}


id: PBO:0072104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S13 pseudogene 2","termid":"PBO:0072104"}


id: PBO:0062228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 1 pseudogene","termid":"PBO:0062228"}


id: RO:0002454
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"symbiotically_interacts_with","termid":"RO:0002440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_host","termid":"RO:0002454"}


id: GO:0099010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modifies the structure of a postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification of synaptic structure","termid":"GO:0099563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modification of postsynaptic structure","synonyms":[{"name":"synapse remodelling","type":"broad"}],"termid":"GO:0099010"}


id: GO:2000055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of Wnt signaling pathway involved in dorsal/ventral axis specification.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Wnt signaling pathway involved in dorsal/ventral axis specification (obsolete GO:2000055)","synonyms":[{"name":"positive regulation of Wnt receptor signaling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"positive regulation of Wnt-activated signaling pathway involved in dorsal/ventral axis specification","type":"exact"}],"termid":"GO:2000055"}


id: MONDO:0008115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Feingold syndrome type 1 (FS1) is a rare inherited malformation syndrome characterized by microcephaly, short stature and numerous digital anomalies.","definition_xrefs":["Orphanet:391641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Feingold syndrome","termid":"MONDO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Feingold syndrome type 1","secondary_identifiers":["OMIM:164280","GARD:17624","UMLS:C4551774","MEDGEN:1637716","SCTID:702431004","ICD9:759.89"],"synonyms":[{"name":"Brunner-Winter syndrome type 1","type":"exact"},{"name":"FGLDS1","type":"exact"},{"name":"FS1","type":"exact"},{"name":"Feingold syndrome","type":"related"},{"name":"Feingold syndrome 1","type":"related"},{"name":"Feingold syndrome caused by mutation in MYCN","type":"exact"},{"name":"Feingold syndrome type 1","type":"exact"},{"name":"MMT type 1","type":"exact"},{"name":"MODED syndrome type 1","type":"exact"},{"name":"MYCN Feingold syndrome","type":"exact"},{"name":"Mmt syndrome","type":"related"},{"name":"ODED syndrome type 1","type":"exact"},{"name":"Oded syndrome","type":"related"},{"name":"digital anomalies with short palpebral fissures and atresia of esophagus or duodenum","type":"related"},{"name":"digital anomalies with short palpebral fissures and atresia of esophagus or duodenum type 1","type":"exact"},{"name":"digital anomalies with short palpebral fissures and atresia of oesophagus or duodenum","type":"related"},{"name":"digital anomalies with short palpebral fissures and atresia of oesophagus or duodenum type 1","type":"exact"},{"name":"microcephaly and digital abnormalities with normal intelligence","type":"related"},{"name":"microcephaly, intellectual disability, and tracheoesophageal fistula syndrome","type":"related"},{"name":"microcephaly, mental retardation, and tracheoesophageal fistula syndrome","type":"related"},{"name":"microcephaly-digital anomalies-normal intelligence syndrome type 1","type":"exact"},{"name":"microcephaly-intellectual disability-tracheoesophageal fistula syndrome type 1","type":"exact"},{"name":"microcephaly-oculo-digito-esophageal-duodenal syndrome","type":"related"},{"name":"microcephaly-oculo-digito-esophageal-duodenal syndrome syndrome type 1","type":"exact"},{"name":"oculo-digito-esophageal-duodenal syndrome type 1","type":"exact"},{"name":"oculodigitoesophagoduodenal syndrome","type":"related"}],"termid":"MONDO:0008115","xrefs":{"Monarch":{"xref_id":"0008115"}}}


id: GO:0120223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the larynx is generated and organized. The larynx is a continuation of the pharynx that is involved in breathing, sound production, and protecting the trachea against food aspiration.","definition_xrefs":["GOC:krc","PMID:28177282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"larynx development","termid":"GO:0120224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larynx morphogenesis","synonyms":[{"name":"laryngeal morphogenesis","type":"exact"}],"termid":"GO:0120223"}


id: GO:0051449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to thyrotropin-releasing hormone, a tripeptide hormone that stimulates the release of thyroid-stimulating hormone (TSH) and prolactin by the anterior pituitary and it is produced by the hypothalamus and travels across the median eminence to the pituitary via the pituitary portal system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"thyrotropin-releasing hormone binding","synonyms":[{"name":"thyrotropin releasing hormone binding","type":"exact"}],"termid":"GO:0051449"}


id: PBO:0090458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 small nuclear RNA auxiliary factor small subunit, U2AF-59","termid":"PBO:0090458"}


id: PR:Q9UTA3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A minor histocompatibility antigen H13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12174:SF23","PRO:DNx","OMA:SCHPO01737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intramembrane protease C25B8.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.17","secondary_identifiers":["UniProtKB:Q9UTA3"],"synonyms":[{"name":"Spom972h-HM13","type":"exact"}],"termid":"PR:Q9UTA3"}


id: PBO:0061747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NXT1 antisense RNA 1","termid":"PBO:0061747"}


id: MOD:00925
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a heptose sugar group through a glycosidic bond.","definition_xrefs":["Unimod:490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"heptosylated residue","synonyms":[{"name":"Hep","type":"related"},{"name":"Heptose","type":"related"}],"termid":"MOD:00925"}


id: MONDO:0020308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic neurological disorder characterized by childhood to mid-adolescence onset of frequent, brief, diurnal simple partial seizures which usually begin with visual hallucinations (e.g. phosphenes) and/or ictal blindness and may associate non visual seizures (such as deviation of the eyes, oculoclonic seizures), forced eyelid closure and blinking and sensory hallucinations. Post-ictal headache is common while impairment of consciousness is rare.","definition_xrefs":["Orphanet:98816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"self-limited childhood occipital epilepsy","termid":"MONDO:0007558"},{"relation_name":"is_a","term_name":"childhood-onset self-limited focal epilepsy syndrome","termid":"MONDO:0800502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"childhood occipital visual epilepsy","secondary_identifiers":["MEDGEN:581521","UMLS:C0393677","GARD:19582"],"synonyms":[{"name":"COVE","type":"exact"},{"name":"benign childhood occipital epilepsy, Gastaut type","type":"exact"},{"name":"childhood occipital epilepsy (Gastaut type)","type":"exact"},{"name":"late-onset benign childhood occipital epilepsy","type":"exact"}],"termid":"MONDO:0020308","xrefs":{"Monarch":{"xref_id":"0020308"}}}


id: PBO:0056639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 14 pseudogene 1","termid":"PBO:0056639"}


id: GO:1990949
data:
  {"annotated_genes":["SJAG_00666","SJAG_01515"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100605,102062],"is_not":false,"summary":null,"term":"GO:1990949"}]},"cv_name":"biological_process","definition":"The cell cycle process in which a cell progresses from metaphase to anaphase as part of meiosis I.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metaphase/anaphase transition of meiotic cell cycle","termid":"GO:0044785"},{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00666":null,"SJAG_01515":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"metaphase/anaphase transition of meiosis I","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"first meiotic metaphase/anaphase transition","type":"related"},{"name":"meiosis I metaphase/anaphase transition","type":"exact"}],"termid":"GO:1990949","terms_by_termid":{"GO:1990949":null}}


id: MONDO:0018318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder of asparagine metabolism (obsolete MONDO:0018318)","secondary_identifiers":["Orphanet:391381"],"termid":"MONDO:0018318","xrefs":{"Monarch":{"xref_id":"0018318"}}}


id: GO:1905698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of polysome binding.","definition_xrefs":["GOC:PARL","PMID:18426977","GO_REF:0000059","GOC:bc","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of polysome binding (obsolete GO:1905698)","synonyms":[{"name":"activation of polyribosome binding","type":"narrow"},{"name":"activation of polysome binding","type":"narrow"},{"name":"positive regulation of polyribosome binding","type":"exact"},{"name":"up regulation of polyribosome binding","type":"exact"},{"name":"up regulation of polysome binding","type":"exact"},{"name":"up-regulation of polyribosome binding","type":"exact"},{"name":"up-regulation of polysome binding","type":"exact"},{"name":"upregulation of polyribosome binding","type":"exact"},{"name":"upregulation of polysome binding","type":"exact"}],"termid":"GO:1905698"}


id: MONDO:0033649
data:
  {"annotated_genes":["SJAG_04348"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87565],"is_not":false,"summary":null,"term":"MONDO:0033649"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex IV deficiency, nuclear-type","termid":"MONDO:0033885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04348":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 4 deficiency, nuclear type 14","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619058","DOID:0070499","GARD:16411","MEDGEN:1763505","UMLS:C5436710"],"synonyms":[{"name":"MC4DN14","type":"exact"},{"name":"mitochondrial complex IV deficiency, nuclear type 14","type":"exact"}],"termid":"MONDO:0033649","terms_by_termid":{"MONDO:0033649":null},"xrefs":{"Monarch":{"xref_id":"0033649"}}}


id: PBO:0072002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 4","termid":"PBO:0072002"}


id: GO:0000974
data:
  {"annotated_genes":["SJAG_04898","SJAG_04497","SJAG_00414","SJAG_03601","SJAG_03711","SJAG_02304","SJAG_03993","SJAG_05349","SJAG_00859","SJAG_01214","SJAG_04783","SJAG_00446","SJAG_00639","SJAG_00094","SJAG_03687","SJAG_01810","SJAG_00911","SJAG_04694","SJAG_04117","SJAG_05212","SJAG_02844","SJAG_01408","SJAG_02078","SJAG_16453","SJAG_01504","SJAG_02227","SJAG_02722"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[64976,65502,69999,71629,73557,73809,74894,75231,77851,79265,79703,79744,94180,98070,99588,100354,102610,104951,105125,109123,109601,111204,113267,113726,116986,117964,120924],"is_not":false,"summary":null,"term":"GO:0000974"}]},"cv_name":"cellular_component","definition":"A protein complex consisting of Prp19 and associated proteins that is involved in the transition from the precatalytic spliceosome to the activated form that catalyzes step 1 of splicing, and which remains associated with the spliceosome through the second catalytic step. It is widely conserved, found in both yeast and mammals, though the exact composition varies. In S. cerevisiae, it contains Prp19p, Ntc20p, Snt309p, Isy1p, Syf2p, Cwc2p, Prp46p, Clf1p, Cef1p, and Syf1p.","definition_xrefs":["PMID:16540691","GOC:krc","PMID:19239890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00094":null,"SJAG_00414":null,"SJAG_00446":null,"SJAG_00639":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_01214":null,"SJAG_01408":null,"SJAG_01504":null,"SJAG_01810":null,"SJAG_02078":null,"SJAG_02227":null,"SJAG_02304":null,"SJAG_02722":null,"SJAG_02844":null,"SJAG_03601":null,"SJAG_03687":null,"SJAG_03711":null,"SJAG_03993":null,"SJAG_04117":null,"SJAG_04497":null,"SJAG_04694":null,"SJAG_04783":null,"SJAG_04898":null,"SJAG_05212":null,"SJAG_05349":null,"SJAG_16453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Prp19 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"MOS4-Associated Complex","type":"narrow"},{"name":"NTC","type":"related"},{"name":"Prp19/CDC5 complex","type":"narrow"},{"name":"nineteen complex","type":"narrow"}],"termid":"GO:0000974","terms_by_termid":{"GO:0000974":null}}


id: PBO:0068376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 169","termid":"PBO:0068376"}


id: PBO:0000515
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.26.11","termid":"PBO:0000515"}


id: PBO:0038525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily G member 5","termid":"PBO:0038525"}


id: PBO:0053718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 928","termid":"PBO:0053718"}


id: GO:0004326
data:
  {"annotated_genes":["SJAG_03224","SJAG_00529"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73971,81129],"is_not":false,"summary":null,"term":"GO:0004326"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + tetrahydrofolyl-(Glu)(n) + L-glutamate = ADP + phosphate + tetrahydrofolyl-(Glu)(n+1).","definition_xrefs":["EC:6.3.2.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00529":null,"SJAG_03224":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"tetrahydrofolylpolyglutamate synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:FOLYLPOLYGLUTAMATESYNTH-RXN","Reactome:R-HSA-197958","Reactome:R-HSA-200681","RHEA:10580","Reactome:R-HSA-200682"],"synonyms":[{"name":"FPGS activity","type":"related"},{"name":"N(10)-formyltetrahydropteroyldiglutamate synthetase activity","type":"related"},{"name":"N10-formyltetrahydropteroyldiglutamate synthetase activity","type":"related"},{"name":"folate polyglutamate synthetase activity","type":"related"},{"name":"folylpoly(gamma-glutamate) synthase activity","type":"related"},{"name":"folylpoly-gamma-glutamate synthase activity","type":"related"},{"name":"folylpoly-gamma-glutamate synthetase-dihydrofolate synthetase activity","type":"related"},{"name":"folylpolyglutamate synthase activity","type":"exact"},{"name":"folylpolyglutamate synthetase activity","type":"related"},{"name":"folylpolyglutamyl synthetase activity","type":"related"},{"name":"formyltetrahydropteroyldiglutamate synthetase activity","type":"related"},{"name":"tetrahydrofolate synthase activity","type":"related"},{"name":"tetrahydrofolate:L-glutamate gamma-ligase (ADP-forming) activity","type":"related"},{"name":"tetrahydrofolyl-[gamma-Glu]n:L-glutamate gamma-ligase (ADP-forming)","type":"related"},{"name":"tetrahydropteroyl-[gamma-polyglutamate]:L-glutamate gamma-ligase (ADP-forming)","type":"related"}],"termid":"GO:0004326","terms_by_termid":{"GO:0004326":null}}


id: PBO:0036276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mouse transcriptional regulator HCNGP-like (predicted)","termid":"PBO:0036276"}


id: PBO:0014618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside-triphosphatase involved in SSU-rRNA maturation Fap7 (predicted)","termid":"PBO:0014618"}


id: MONDO:0011550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibromatosis, gingival, with hypertrichosis and intellectual disability","secondary_identifiers":["UMLS:C1854306","MESH:C565331","MEDGEN:344255","OMIM:605400"],"synonyms":[{"name":"fibromatosis, gingival, with hypertrichosis and intellectual disability","type":"exact"},{"name":"fibromatosis, gingival, with hypertrichosis and mental retardation","type":"exact"}],"termid":"MONDO:0011550","xrefs":{"Monarch":{"xref_id":"0011550"}}}


id: PBO:0035706
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytoplasmic_microtubule_nucleation_during_mitotic_interphase","termid":"PBO:0035706"}


id: GO:0016487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the sesquiterpenoid alcohol farnesol, 3,7,11-trimethyl-2,6,10,dodecatrien-1-ol.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid metabolic process","termid":"GO:0006714"},{"relation_name":"is_a","term_name":"polyprenol metabolic process","termid":"GO:0016093"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"farnesol metabolic process","synonyms":[{"name":"farnesol metabolism","type":"exact"}],"termid":"GO:0016487"}


id: GO:0075229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of encysted zoospore germination.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of encysted zoospore germination","termid":"GO:0075227"},{"relation_name":"is_a","term_name":"negative regulation of spore germination","termid":"GO:1904360"},{"relation_name":"negatively_regulates","term_name":"encysted zoospore germination","termid":"GO:0075226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of encysted zoospore germination","synonyms":[{"name":"negative regulation of encysted zoospore germination on or near host","type":"exact"}],"termid":"GO:0075229"}


id: GO:0001778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The resealing of a cell plasma membrane after cellular wounding due to, for instance, mechanical stress.","definition_xrefs":["PMID:12925704","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"part_of","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"plasma membrane repair","termid":"GO:0001778"}


id: PBO:0063730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase and actin regulator 3","termid":"PBO:0063730"}


id: GO:0018758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4-dihydroxy-6-(N'-ethyl)amino-1,3,5-triazine + H2O = CH3CH2NH2 + cyanuric acid.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4-dihydroxy-6-(N'-ethyl)amino-1,3,5-triazine aminohydrolase activity (obsolete GO:0018758)","termid":"GO:0018758"}


id: MONDO:0018682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital insensitivity to pain with severe intellectual disability","secondary_identifiers":["MEDGEN:1814444","Orphanet:453510","UMLS:C5679994","GARD:21890"],"synonyms":[{"name":"congenital absence of pain with severe intellectual disability","type":"exact"},{"name":"congenital analgesia with severe intellectual disability","type":"exact"},{"name":"congenital insensitivity to pain with preserved temperature sensation","type":"exact"},{"name":"congenital insensitivity to pain with severe non-progressive cognitive delay","type":"exact"}],"termid":"MONDO:0018682","xrefs":{"Monarch":{"xref_id":"0018682"}}}


id: GO:0035332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hippo signaling.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hippo signaling","termid":"GO:0035330"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"hippo signaling","termid":"GO:0035329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of hippo signaling","synonyms":[{"name":"positive regulation of hippo signaling cascade","type":"related"},{"name":"positive regulation of hippo signaling pathway","type":"exact"},{"name":"positive regulation of hippo signalling cascade","type":"related"}],"termid":"GO:0035332"}


id: GO:0030142
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vesicle that mediates transport from the Golgi to the endoplasmic reticulum.","definition_xrefs":["GOC:mah","PMID:22160157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle","termid":"GO:0030133"},{"relation_name":"is_a","term_name":"COPI-coated vesicle","termid":"GO:0030137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"COPI-coated Golgi to ER transport vesicle","synonyms":[{"name":"Golgi to ER constitutive secretory pathway transport vesicle","type":"exact"},{"name":"Golgi to endoplasmic reticulum transport vesicle","type":"exact"},{"name":"Golgi-ER transport vesicle","type":"exact"},{"name":"Golgi-endoplasmic reticulum transport vesicle","type":"exact"},{"name":"retrograde transport vesicle","type":"exact"}],"termid":"GO:0030142"}


id: PBO:0076206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 16","termid":"PBO:0076206"}


id: MONDO:0001518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"entropion","termid":"MONDO:0001519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"spastic entropion","secondary_identifiers":["DOID:12395","MEDGEN:509839","SCTID:20828000","ICD9:374.03","UMLS:C0155190"],"termid":"MONDO:0001518","xrefs":{"Monarch":{"xref_id":"0001518"}}}


id: PBO:0091034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex histone chaperone module subunit Vps71","termid":"PBO:0091034"}


id: PBO:0002012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centaurin ADOP ribosylation factor GTPase activating protein family","termid":"PBO:0002012"}


id: MONDO:0007216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly type A2 (BDA2) is a congenital malformation characterized by shortening (hypoplasia or aplasia) of the middle phalanges of the index finger and, sometimes, of the little finger.","definition_xrefs":["Orphanet:93396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly type A2","secondary_identifiers":["MESH:C537089","MEDGEN:318690","SCTID:720569006","DOID:0110965","GARD:979","UMLS:C1832702","icd11.foundation:594491464","OMIM:112600"],"synonyms":[{"name":"BDA2","type":"exact"},{"name":"Brachymesophalangy 2","type":"related"},{"name":"Brachymesophalangy type 2","type":"related"},{"name":"Mohr-Wriedt type brachydactyly","type":"exact"},{"name":"brachydactyly, Mohr-Wriedt type","type":"exact"},{"name":"brachydactyly, type A2","type":"related"},{"name":"brachymesophalangy II","type":"exact"}],"termid":"MONDO:0007216","xrefs":{"Monarch":{"xref_id":"0007216"}}}


id: GO:0001977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A slow mechanism of blood pressure regulation that responds to changes in pressure resulting from fluid and salt intake by modulating the quantity of blood in the circulatory system.","definition_xrefs":["GOC:tb","ISBN:0721643949","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process involved in regulation of systemic arterial blood pressure","termid":"GO:0003071"},{"relation_name":"part_of","term_name":"regulation of body fluid levels","termid":"GO:0050878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system process involved in regulation of blood volume","synonyms":[{"name":"renal blood volume control of blood pressure","type":"related"},{"name":"renal regulation of blood volume","type":"related"}],"termid":"GO:0001977"}


id: PBO:0036092
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K4_methylation_during_vegetative_growth","termid":"PBO:0036092"}


id: MONDO:0005933
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A malignant neoplasm of the lung composed of tubular structures and immature mesenchymal elements, which may differentiate towards skeletal and smooth muscle, cartilage or a combination of muscle and cartilage. This is a nodular tumor found in the periphery of the lung. It can occur at any age. The prognosis is related to the stage of the disease at the time of resection. Pulmonary blastoma is divided into two subtypes: epithelial predominant and biphasic.","definition_xrefs":["NCIT:C3732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blastoma","termid":"MONDO:0005565"},{"relation_name":"is_a","term_name":"lung sarcomatoid carcinoma","termid":"MONDO:0006279"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pulmonary blastoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:61645","ICD9:162.9","ICDO:8972/3","SCTID:189815007","UMLS:C0206629","EFO:0007458","MESH:D018202","DOID:4765","Orphanet:64741","GARD:18864"],"synonyms":[{"name":"Pneumoblastoma","type":"exact"},{"name":"blastoma of lung","type":"exact"},{"name":"blastoma of the lung","type":"exact"},{"name":"lung blastoma","type":"exact"},{"name":"pulmonary blastoma","type":"exact"}],"termid":"MONDO:0005933","terms_by_termid":{"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0005933"}}}


id: GO:1904608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monosodium L-glutamate stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:21389115"],"gene_count":0,"genotype_count":0,"name":"obsolete response to monosodium L-glutamate (obsolete GO:1904608)","termid":"GO:1904608"}


id: GO:0009318
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes exonucleolytic cleavage in either 5' to 3' or 3' to 5' direction to yield nucleoside 5'-phosphates; it prefers single-stranded DNA.","definition_xrefs":["PMID:6284744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"exodeoxyribonuclease VII complex","termid":"GO:0009318"}


id: PBO:0054262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1647","termid":"PBO:0054262"}


id: GO:0106368
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2'-deoxyribonucleoside 5'-phosphate + dTTP = a 2'-deoxyribonucleoside 5'-diphosphate + dTDP.","definition_xrefs":["PMID:20497505","RHEA:62132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"deoxynucleoside phosphate kinase activity, dTTP as phosphate donor","termid":"GO:0106368"}


id: GO:0072357
data:
  {"annotated_genes":["SJAG_02536","SJAG_03126","SJAG_04968"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70826,99610,118591],"is_not":false,"summary":null,"term":"GO:0072357"}]},"cv_name":"cellular_component","definition":"A protein serine/threonine phosphatase complex that contains a catalytic subunit (PPP1CA, PPP1CB or PPP1CC) and the regulatory subunits PPP1R10 (PNUTS), TOX4 and WDR82, and plays a role in the control of chromatin structure and cell cycle progression during the transition from mitosis into interphase.","definition_xrefs":["PMID:20516061","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase type 1 complex","termid":"GO:0000164"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02536":null,"SJAG_03126":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"PTW/PP1 phosphatase complex","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0072357","terms_by_termid":{"GO:0072357":null}}


id: PBO:0081692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 614","termid":"PBO:0081692"}


id: PBO:0002258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent methyltransferase (predicted)","termid":"PBO:0002258"}


id: PATO:0000712
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000712 bouts value (obsolete PATO:0000712)","termid":"PATO:0000712"}


id: GO:0035500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a MH2 (MAD homology 2) protein domain. The MH2 domain is found at the carboxy-terminus of MAD related proteins such as Smads. The MH2 domain mediates interaction with a wide variety of proteins and provides specificity and selectivity to Smad function and also is critical for mediating interactions in Smad oligomers.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"MH2 domain binding","synonyms":[{"name":"MAD homology 2 domain binding","type":"exact"}],"termid":"GO:0035500"}


id: PBO:0053606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 639","termid":"PBO:0053606"}


id: GO:0019726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-mevalonate + NADP+ = H+ + mevaldate + NADPH.","definition_xrefs":["RHEA:20193","EC:1.1.1.33"],"gene_count":0,"genotype_count":0,"name":"obsolete mevaldate reductase (NADPH) activity (obsolete GO:0019726)","synonyms":[{"name":"(R)-mevalonate:NADP+ oxidoreductase","type":"related"},{"name":"mevaldate (reduced nicotinamide adenine dinucleotide phosphate) reductase","type":"related"}],"termid":"GO:0019726"}


id: PBO:0067706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 4","termid":"PBO:0067706"}


id: PATO:0002517
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a saddle.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saddle-shaped","termid":"PATO:0002517"}


id: GO:0160136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(516) in 16S rRNA = pseudouridine(516) in 16S rRNA.","definition_xrefs":["EC:5.4.99.19","RHEA:38867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140098","GO:0016853"],"is_obsolete":false,"name":"16S rRNA pseudouridine(516) synthase activity","termid":"GO:0160136"}


id: PBO:0001510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YEATS family histone acetyltransferase subunit Yaf9","termid":"PBO:0001510"}


id: MONDO:0009359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"hereditary lethal multiple congenital anomalies/dysmorphic syndrome","termid":"MONDO:0043009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"multinucleated neurons-anhydramnios-renal dysplasia-cerebellar hypoplasia-hydranencephaly syndrome","secondary_identifiers":["MEDGEN:343465","MESH:C565507","OMIM:236500","GARD:17922","UMLS:C1856053","Orphanet:500135","DOID:0080327"],"synonyms":[{"name":"MARCH","type":"related"},{"name":"MARCH syndrome","type":"exact"},{"name":"hydranencephaly with renal aplasia-dysplasia","type":"exact"},{"name":"multinucleated neurons, anhydramnios, renal dysplasia, cerebellar Hypoplasia, and hydranencephaly","type":"related"},{"name":"multinucleated neurons, anhydramnios, renal dysplasia, cerebellar hypoplasia, and hydranencephaly","type":"related"}],"termid":"MONDO:0009359","xrefs":{"Monarch":{"xref_id":"0009359"}}}


id: GO:0004909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-1 to initiate a change in cell activity via signaling pathways and mediated by adaptor proteins.","definition_xrefs":["PMID:18613828","PMID:15062641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-1 receptor activity","termid":"GO:0004908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-1, type I, activating receptor activity","secondary_identifiers":["GO:0019967"],"synonyms":[{"name":"IL-1 type I, activating binding","type":"exact"},{"name":"IL-1 type I, activating receptor","type":"exact"},{"name":"interleukin-1 activating receptor activity","type":"exact"},{"name":"interleukin-1 type I receptor activity","type":"exact"},{"name":"interleukin-1, type I, activating binding","type":"related"}],"termid":"GO:0004909"}


id: PBO:0016043
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by rat PTBP3","termid":"PBO:0016043"}


id: PBO:0044525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dachshund family transcription factor 2","termid":"PBO:0044525"}


id: PBO:0071026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 28","termid":"PBO:0071026"}


id: GO:0051221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of tungsten into a metallo-sulfur cluster.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete tungsten incorporation into metallo-sulfur cluster (obsolete GO:0051221)","synonyms":[{"name":"tungsten incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0051221"}


id: GO:0009423
data:
  {"annotated_genes":["SJAG_00224","SJAG_00518","SJAG_03485","SJAG_00337","SJAG_03580"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91708,92977,96484,103182,116089],"is_not":false,"summary":null,"term":"GO:0009423"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the unsymmetrical ether derived from phosphoenolpyruvate and 5-phosphoshikimic acid formed as an intermediate in the biosynthesis of aromatic amino acids and many other compounds.","definition_xrefs":["GOC:sm","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"},{"relation_name":"is_a","term_name":"chorismate metabolic process","termid":"GO:0046417"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00224":null,"SJAG_00337":null,"SJAG_00518":null,"SJAG_03485":null,"SJAG_03580":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"chorismate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0033587","MetaCyc:ARO-PWY"],"synonyms":[{"name":"chorismate anabolism","type":"exact"},{"name":"chorismate biosynthesis","type":"exact"},{"name":"chorismate formation","type":"exact"},{"name":"chorismate synthesis","type":"exact"},{"name":"shikimate anabolism","type":"related"},{"name":"shikimate biosynthesis","type":"related"},{"name":"shikimate biosynthetic process","type":"related"},{"name":"shikimate pathway","type":"exact"},{"name":"shikimate synthesis","type":"related"}],"termid":"GO:0009423","terms_by_termid":{"GO:0009423":null}}


id: GO:0004240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of N-terminal transit peptides from precursor proteins imported into the mitochondrion, typically with Arg in position P2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial processing peptidase activity (obsolete GO:0004240)","synonyms":[{"name":"MPP","type":"exact"},{"name":"alpha-mitochondrial processing peptidase","type":"narrow"},{"name":"beta-mitochondrial processing peptidase","type":"narrow"},{"name":"matrix peptidase","type":"related"},{"name":"matrix processing peptidase","type":"related"},{"name":"matrix processing proteinase","type":"related"},{"name":"mitochondrial processing peptidase activity","type":"exact"},{"name":"mitochondrial protein precursor-processing proteinase activity","type":"related"},{"name":"processing enhancing peptidase (for one of two subunits)","type":"related"},{"name":"processing enhancing peptidase activity","type":"narrow"}],"termid":"GO:0004240"}


id: GO:0031354
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plastid outer membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of plastid outer membrane (obsolete GO:0031354)","synonyms":[{"name":"intrinsic to plastid outer membrane","type":"narrow"}],"termid":"GO:0031354"}


id: GO:1905320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal stem cell migration.","definition_xrefs":["PMID:26846297","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"mesenchymal stem cell migration","termid":"GO:1905319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal stem cell migration","termid":"GO:1905320"}


id: GO:2000389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neutrophil extravasation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular extravasation","termid":"GO:0002691"},{"relation_name":"is_a","term_name":"regulation of neutrophil migration","termid":"GO:1902622"},{"relation_name":"regulates","term_name":"neutrophil extravasation","termid":"GO:0072672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil extravasation","termid":"GO:2000389"}


id: GO:1900495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of butyryl-CoA biosynthetic process from acetyl-CoA.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of fatty acid biosynthetic process","termid":"GO:0045717"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of butyryl-CoA biosynthetic process from acetyl-CoA","termid":"GO:1900494"},{"relation_name":"negatively_regulates","term_name":"butyryl-CoA biosynthetic process from acetyl-CoA","termid":"GO:0044579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0006790","GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"negative regulation of butyryl-CoA biosynthetic process from acetyl-CoA","synonyms":[{"name":"down regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"down regulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"},{"name":"down-regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"down-regulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"},{"name":"downregulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"downregulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"},{"name":"inhibition of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"inhibition of butyryl-CoA biosynthetic process from acetyl-CoA","type":"narrow"},{"name":"negative regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"}],"termid":"GO:1900495"}


id: PBO:0062480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily L member 1 pseudogene","termid":"PBO:0062480"}


id: PBO:0059278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L37","termid":"PBO:0059278"}


id: GO:0140330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that reduces or removes the toxicity of a xenobiotic by exporting it outside the cell through the outer membrane.","definition_xrefs":["PMID:11948170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic transport","termid":"GO:0042908"},{"relation_name":"is_a","term_name":"export across cell outer membrane","termid":"GO:0140317"},{"relation_name":"part_of","term_name":"detoxification","termid":"GO:0098754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0098754","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"xenobiotic detoxification by transmembrane export across the cell outer membrane","termid":"GO:0140330"}


id: GO:0045645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eosinophil differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of granulocyte differentiation","termid":"GO:0030854"},{"relation_name":"is_a","term_name":"regulation of eosinophil differentiation","termid":"GO:0045643"},{"relation_name":"positively_regulates","term_name":"eosinophil differentiation","termid":"GO:0030222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of eosinophil differentiation","synonyms":[{"name":"activation of eosinophil differentiation","type":"narrow"},{"name":"stimulation of eosinophil differentiation","type":"narrow"},{"name":"up regulation of eosinophil differentiation","type":"exact"},{"name":"up-regulation of eosinophil differentiation","type":"exact"},{"name":"upregulation of eosinophil differentiation","type":"exact"}],"termid":"GO:0045645"}


id: PBO:0034107
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-surrounded_by","termid":"PBO:0034107"}


id: MONDO:0957114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular channelopathy","termid":"MONDO:0019119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurological muscular channelopathy due to a genetic potassium channel defect","secondary_identifiers":["GARD:19566","Orphanet:98741","UMLS:C5681685","MEDGEN:1842582"],"termid":"MONDO:0957114","xrefs":{"Monarch":{"xref_id":"0957114"}}}


id: GO:0002091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of receptor internalization.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor internalization","termid":"GO:0002090"},{"relation_name":"is_a","term_name":"negative regulation of receptor-mediated endocytosis","termid":"GO:0048261"},{"relation_name":"negatively_regulates","term_name":"receptor internalization","termid":"GO:0031623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of receptor internalization","synonyms":[{"name":"down regulation of receptor internalization","type":"exact"},{"name":"down-regulation of receptor internalization","type":"exact"},{"name":"downregulation of receptor internalization","type":"exact"},{"name":"inhibition of receptor internalization","type":"narrow"}],"termid":"GO:0002091"}


id: GO:0007525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the somatic muscle over time, from its formation to the mature structure. Somatic muscles are striated muscle structures that connect to the exoskeleton or cuticle.","definition_xrefs":["GOC:mtg_muscle","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle structure development","termid":"GO:0061061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic muscle development","termid":"GO:0007525"}


id: PBO:0078429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (GCC) 6-1","termid":"PBO:0078429"}


id: MOD:01081
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta-glycosyloxy- (of lysine) or beta-glycosyloxy- (of phenylalanine or tyrosine)","termid":"MOD:01081"}


id: GO:0060320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The recognition and rejection of self pollen by cells in the stigma, mediated by the sharing and interaction of the single locus incompatibility haplotypes.","definition_xrefs":["PMID:34848142","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recognition of pollen","termid":"GO:0048544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rejection of self pollen","synonyms":[{"name":"self-incompatibility","type":"related"}],"termid":"GO:0060320"}


id: GO:0042980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a Cystic Fibrosis Transmembrane conductance Regulator (CFTR) protein.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cystic fibrosis transmembrane conductance regulator binding (obsolete GO:0042980)","synonyms":[{"name":"CFTR binding","type":"exact"},{"name":"cystic fibrosis transmembrane conductance regulator binding","type":"exact"}],"termid":"GO:0042980"}


id: MONDO:1012258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spinal dysplasia, non-human animal","termid":"MONDO:1011953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal dysplasia, domestic cat","secondary_identifiers":["OMIA:000937-9685"],"termid":"MONDO:1012258","xrefs":{"Monarch":{"xref_id":"1012258"}}}


id: PBO:0005226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human leukocyte receptor 1 ortholog","termid":"PBO:0005226"}


id: SO:0002238
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 5S_rRNA, which is a portion of the large subunit of the ribosome in both eukaryotes and prokaryotes.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA_gene","termid":"SO:0002361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_5S_gene","synonyms":[{"name":"5S rRNA gene","type":"exact"},{"name":"5S_rRNA_gene","type":"exact"}],"termid":"SO:0002238"}


id: PBO:0004952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper amine oxidase-like protein Cao2","termid":"PBO:0004952"}


id: GO:0098735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the force of heart muscle contraction.","definition_xrefs":["PMID:17242280","GOC:BHF","GOC:dos","GOC:mtg_cardiac_conduct_nov11","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of the force of heart contraction","termid":"GO:0002026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction","termid":"GO:0098735"}


id: GO:1902789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an isooctane stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","GOC:mengo_curators","PMID:22328008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkane","termid":"GO:1902779"},{"relation_name":"is_a","term_name":"response to isooctane","termid":"GO:1902788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to isooctane","termid":"GO:1902789"}


id: GO:0000786
data:
  {"annotated_genes":["SJAG_00303","SJAG_01873","SJAG_03942","SJAG_03047","SJAG_03542","SJAG_03543","SJAG_03941","SJAG_00307","SJAG_00336","SJAG_00302","SJAG_00335"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60894,61578,74960,75545,78456,114563,114565,114591,114592],"is_not":false,"summary":null,"term":"GO:0000786"},{"annotations":[103991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043505"},{"annotations":[121457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140573"}]},"cv_name":"cellular_component","definition":"A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00302":null,"SJAG_00303":null,"SJAG_00307":null,"SJAG_00335":null,"SJAG_00336":null,"SJAG_01873":null,"SJAG_03047":null,"SJAG_03542":null,"SJAG_03543":null,"SJAG_03941":null,"SJAG_03942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"nucleosome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:24184107":null},"secondary_identifiers":["GO:0000787","GO:0000788","GO:0005718","Wikipedia:Nucleosome"],"synonyms":[{"name":"cytoplasmic nucleosome","type":"narrow"},{"name":"nuclear nucleosome","type":"narrow"}],"termid":"GO:0000786","terms_by_termid":{"GO:0000786":null,"GO:0043505":null,"GO:0140573":null}}


id: PBO:0069331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 590, pseudogene","termid":"PBO:0069331"}


id: PBO:0082815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved fungal gene linked to DNA repair and proteasome function; putative substrate of cAMP-dependent protein kinase (PKA); green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; YPL260W is not an essential gene; protein abundance increases in response to DNA replication stress","termid":"PBO:0082815"}


id: PATO:0002381
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in an bearer by virtue of the presence of long chain aliphatic lipids on the surface of an organism.","definition_xrefs":["PATOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"waxiness","termid":"PATO:0002381"}


id: PBO:0068171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 478","termid":"PBO:0068171"}


id: PR:O94305
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mgl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoglyceride lipase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC5E4.05c","synonyms":[{"name":"MAG hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MAG lipase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MAGL (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MGH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MGL (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mgl1","type":"exact"},{"name":"monoacylglycerol hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"monoacylglycerol lipase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94305"}


id: PBO:0035905
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_septation_index_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0035905"}


id: PBO:0072931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 11","termid":"PBO:0072931"}


id: PBO:0084467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPKK involved in the protein kinase C signaling pathway; involved in control of cell integrity; upon activation by Bck1p phosphorylates downstream target, Slt2p; functionally redundant with Mkk1p; MKK2 has a paralog, MKK1, that arose from the whole genome duplication","termid":"PBO:0084467"}


id: MONDO:0004800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of dacryoadenitis.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dacryoadenitis","termid":"MONDO:0004804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"chronic dacryoadenitis","secondary_identifiers":["UMLS:C0155224","SCTID:4760008","ICD9:375.02","MEDGEN:509857","DOID:949"],"synonyms":[{"name":"dacryoadenitis, chronic","type":"exact"}],"termid":"MONDO:0004800","xrefs":{"Monarch":{"xref_id":"0004800"}}}


id: GO:0019617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of protocatechuate, the anion of 3,4-dihydroxybenzoic acid, to yield oxaloacetate and pyruvate.","definition_xrefs":["MetaCyc:P184-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate metabolic process","termid":"GO:0006090"},{"relation_name":"is_a","term_name":"oxaloacetate metabolic process","termid":"GO:0006107"},{"relation_name":"is_a","term_name":"3,4-dihydroxybenzoate catabolic process","termid":"GO:0019619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"protocatechuate catabolic process, meta-cleavage","synonyms":[{"name":"3,4-dihydroxybenzoate catabolic process, meta-cleavage","type":"related"},{"name":"protocatechuate breakdown, meta-cleavage","type":"exact"},{"name":"protocatechuate catabolic process to oxaloacetate and pyruvate","type":"exact"},{"name":"protocatechuate degradation, meta-cleavage","type":"exact"}],"termid":"GO:0019617"}


id: PBO:0001604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar serine protease Isp6","termid":"PBO:0001604"}


id: MONDO:0017965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with 46,XX disorder of sex development (obsolete MONDO:0017965)","secondary_identifiers":["Orphanet:325109"],"synonyms":[{"name":"syndrome with 46,XX DSD","type":"exact"}],"termid":"MONDO:0017965","xrefs":{"Monarch":{"xref_id":"0017965"}}}


id: GO:0070249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer cell death by apoptotic process.","definition_xrefs":["ISBN:0781765196","GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphocyte apoptotic process","termid":"GO:0070230"},{"relation_name":"is_a","term_name":"regulation of natural killer cell apoptotic process","termid":"GO:0070247"},{"relation_name":"positively_regulates","term_name":"natural killer cell apoptotic process","termid":"GO:0070246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell apoptotic process","synonyms":[{"name":"activation of natural killer cell apoptosis","type":"narrow"},{"name":"positive regulation of NK cell apoptosis","type":"exact"},{"name":"positive regulation of natural killer cell apoptosis","type":"narrow"},{"name":"stimulation of natural killer cell apoptosis","type":"narrow"},{"name":"up regulation of natural killer cell apoptosis","type":"exact"},{"name":"up-regulation of natural killer cell apoptosis","type":"exact"},{"name":"upregulation of natural killer cell apoptosis","type":"exact"}],"termid":"GO:0070249"}


id: GO:0061309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a cardiac neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell that contributes to the shaping of the outflow tract.","definition_xrefs":["GOC:dph","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac neural crest cell development involved in heart development","termid":"GO:0061308"},{"relation_name":"part_of","term_name":"outflow tract morphogenesis","termid":"GO:0003151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac neural crest cell development involved in outflow tract morphogenesis","termid":"GO:0061309"}


id: PBO:0062111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 10 pseudogene","termid":"PBO:0062111"}


id: MONDO:0019531
data:
  {"annotated_genes":["SJAG_01162"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88705],"is_not":false,"summary":null,"term":"MONDO:0019531"}]},"cv_name":"mondo","definition":"Haemolytic anemia due to glutathione reductase (GSR) deficiency is characterized by nearly complete absence of GSR activity in erythrocytes.","definition_xrefs":["Orphanet:90030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nonspherocytic hemolytic anemia","termid":"MONDO:0006506"},{"relation_name":"is_a","term_name":"inherited glutathione metabolism disease","termid":"MONDO:0040566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019241"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570","MONDO:0019241","MONDO:0005066"],"is_obsolete":false,"name":"hemolytic anemia due to glutathione reductase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5231513","OMIM:618660","MEDGEN:1684855","MONDO:0032856","GARD:16784"],"synonyms":[{"name":"hemolytic anemia due to glutathione reductase deficiency","type":"exact"}],"termid":"MONDO:0019531","terms_by_termid":{"MONDO:0019531":null},"xrefs":{"Monarch":{"xref_id":"0019531"}}}


id: PBO:0015669
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vitamin H Transporter","termid":"PBO:0015669"}


id: GO:0009317
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that catalyzes the first step in long-chain fatty acid biosynthesis. For example, in E. coli the complex is heterohexameric and composed of biotin carbonyl carrier protein, biotin carboxylase and the acetate CoA-transferase complex.","definition_xrefs":["GOC:mah","GOC:jl","PMID:12121720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"acetyl-CoA carboxylase complex","synonyms":[{"name":"ACCase complex","type":"exact"}],"termid":"GO:0009317"}


id: PBO:0041476
data:
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