# terms

id: PBO:0002692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component beta 6","termid":"PBO:0002692"}


id: PBO:0109625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 79 (pseudogene)","termid":"PBO:0109625"}


id: GO:0021964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the red nucleus of the midbrain towards target cells in the spinal cord.","definition_xrefs":["GOC:cls","GOC:jid","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rubrospinal tract morphogenesis","termid":"GO:0021964"}


id: GO:0004755
data:
  {"annotated_genes":["SJAG_01061"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111674],"is_not":false,"summary":null,"term":"GO:0004755"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-saccharopine + H2O + NADP+ = L-allysine + L-glutamate + H+ + NADPH.","definition_xrefs":["EC:1.5.1.10","RHEA:10020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"saccharopine dehydrogenase activity","termid":"GO:0004753"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01061":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"saccharopine dehydrogenase (NADP+, L-glutamate-forming) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R02315","MetaCyc:RXN3O-127"],"synonyms":[{"name":"6-N-(L-1,3-dicarboxypropyl)-L-lysine:NADP+ oxidoreductase (L-glutamate-forming)","type":"related"},{"name":"N6-(L-1,3-dicarboxypropyl)-L-lysine:NADP+ oxidoreductase (L-glutamate-forming)","type":"related"},{"name":"aminoadipate semialdehyde-glutamate reductase activity","type":"related"},{"name":"aminoadipic semialdehyde-glutamate reductase activity","type":"related"},{"name":"aminoadipic semialdehyde-glutamic reductase activity","type":"related"},{"name":"epsilon-N-(L-glutaryl-2)-L-lysine:NAD+(P) oxidoreductase (L-2-aminoadipate-semialdehyde forming)","type":"related"},{"name":"saccharopine (nicotinamide adenine dinucleotide phosphate, glutamate-forming) dehydrogenase activity","type":"related"},{"name":"saccharopine reductase activity","type":"related"}],"termid":"GO:0004755","terms_by_termid":{"GO:0004755":null}}


id: FYPO:0004593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that shows detectable differences from normal at the level of an individual cell, when the cell is in the vegetative growth phase of the cell cycle, and after it has undergone a normal mitotic nuclear division and passed through the subsequent mitotic interphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal vegetative cell phenotype following normal mitosis","synonyms":[{"name":"abnormal cell phenotype following normal mitosis during vegetative growth","type":"exact"},{"name":"abnormal vegetative cell phenotype following normal mitosis and interphase","type":"exact"},{"name":"abnormal vegetative cell phenotype following normal mitosis and passage through mitotic G1 phase","type":"exact"},{"name":"abnormal vegetative cell phenotype following normal mitotic nuclear division","type":"exact"},{"name":"abnormal vegetative cell phenotype following normal nuclear division during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0004593"}


id: MOD:01583
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-121 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","termid":"MOD:01577"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-121 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01583"}


id: PBO:0034560
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_binding_during_mitotic_S_phase","termid":"PBO:0034560"}


id: PBO:0029562
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_1,3-beta-D-glucan_synthase_activity","termid":"PBO:0029562"}


id: GO:0106220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrocyanin, an iminium betaine that is 5-methylphenazin-5-ium which is substituted at position 1 by an oxidanidyl group.","definition_xrefs":["PMID:28715477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyocyanine biosynthetic process","synonyms":[{"name":"pyocyanin biosynthetic process","type":"exact"}],"termid":"GO:0106220"}


id: PBO:0047059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120A","termid":"PBO:0047059"}


id: PBO:0066697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"required for meiotic nuclear division 1 homolog","termid":"PBO:0066697"}


id: PBO:0077484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 203","termid":"PBO:0077484"}


id: GO:0048232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of the male gamete; specialised haploid cells produced by meiosis and along with a female gamete takes part in sexual reproduction.","definition_xrefs":["GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamete generation","termid":"GO:0007276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male gamete generation","termid":"GO:0048232"}


id: SO:0002293
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The non-coding region of the mitochondrial genome that controls RNA and DNA synthesis.","definition_xrefs":["PMID:10968878"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"mitochondrial_sequence","termid":"SO:0000737"},{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial_control_region","secondary_identifiers":["https://en.wikipedia.org/wiki/MtDNA_control_region"],"synonyms":[{"name":"Mitochondrial A+T region","type":"exact"},{"name":"Mitochondrial DNA control region","type":"exact"},{"name":"Mitochondrial NCR","type":"exact"},{"name":"Mitochondrial noncoding region","type":"exact"},{"name":"MtDNA control region","type":"exact"},{"name":"MtDNA_control_region","type":"exact"}],"termid":"SO:0002293"}


id: GO:0060338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a type I interferon-mediated signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"regulates","term_name":"type I interferon-mediated signaling pathway","termid":"GO:0060337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of type I interferon-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-912694"],"synonyms":[{"name":"regulation of type I interferon-mediated signalling pathway","type":"exact"}],"termid":"GO:0060338"}


id: GO:0046646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gamma-delta T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell activation","termid":"GO:0046643"},{"relation_name":"regulates","term_name":"gamma-delta T cell proliferation","termid":"GO:0046630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gamma-delta T cell proliferation","synonyms":[{"name":"regulation of gamma-delta T lymphocyte proliferation","type":"exact"},{"name":"regulation of gamma-delta T-cell proliferation","type":"exact"},{"name":"regulation of gamma-delta T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046646"}


id: PBO:0059846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase","termid":"PBO:0059846"}


id: MONDO:0009666
data:
  {"annotated_genes":["SJAG_03069"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88109],"is_not":false,"summary":null,"term":"MONDO:0009666"}]},"cv_name":"mondo","definition":"A rare, early-onset and life-threatening, multiple carboxylase deficiency that when left untreated, is characterized by vomiting, tachypnea, irritability, lethargy, exfoliative dermatitis, and seizures that can worsen to coma and death.","definition_xrefs":["Orphanet:79242"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metabolic epilepsy","termid":"MONDO:0100033"},{"relation_name":"is_a","term_name":"multiple carboxylase deficiency","termid":"MONDO:0015454"},{"relation_name":"is_a","term_name":"inborn disorder of branched-chain amino acid metabolism","termid":"MONDO:0019242"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03069":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0037792"],"is_obsolete":false,"name":"holocarboxylase synthetase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:120653","SCTID:15307001","DOID:859","GARD:2721","NANDO:1200821","MESH:D028922","NCIT:C98842","SCTID:360369003","UMLS:C0268581","OMIM:253270","ICD9:270.8"],"synonyms":[{"name":"HLCS deficiency","type":"related"},{"name":"biotin-(propionyl-CoA-carboxylase) ligase deficiency","type":"exact"},{"name":"early-onset multiple carboxylase deficiency","type":"exact"},{"name":"holocarboxylase synthase deficiency","type":"exact"},{"name":"holocarboxylase synthetase deficiency","type":"exact"},{"name":"multiple carboxylase deficiency","type":"broad"},{"name":"multiple carboxylase deficiency - neonatal onset","type":"exact"},{"name":"multiple carboxylase deficiency, early onset","type":"related"},{"name":"multiple carboxylase deficiency, neonatal form","type":"related"},{"name":"neonatal multiple carboxylase deficiency","type":"exact"}],"termid":"MONDO:0009666","terms_by_termid":{"MONDO:0009666":null},"xrefs":{"Monarch":{"xref_id":"0009666"}}}


id: PBO:0076068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm-tail PG-rich repeat containing 4","termid":"PBO:0076068"}


id: PBO:0082265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aminophospholipid translocase (flippase); type 4 P-type ATPase; involved in phospholipid translocation, contributing to endocytosis, protein transport, and cellular polarization; localizes primarily to the plasma membrane; localizes to the shmoo tip where it has a redundant role in the cellular response to mating pheromone; DNF1 has a paralog, DNF2, that arose from the whole genome duplication","termid":"PBO:0082265"}


id: PBO:0060727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A13","termid":"PBO:0060727"}


id: MONDO:0005374
data:
  {"annotated_genes":["SJAG_01013","SJAG_03905","SJAG_03453","SJAG_01748","SJAG_01349","SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89065,89066,89064,89067,89221,89222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"}]},"cv_name":"mondo","definition":"Neoplasms that affect the bone marrow. Such neoplasms may arise in the bone marrow (e.g. myeloid leukemias) or may involve the bone marrow as secondary, metastatic tumors (e.g. metastatic carcinomas to the bone marrow).","definition_xrefs":["NCIT:C35370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic and lymphoid system neoplasm","termid":"MONDO:0002334"},{"relation_name":"is_a","term_name":"bone marrow disorder","termid":"MONDO:0003225"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_01349":null,"SJAG_01748":null,"SJAG_03453":null,"SJAG_03905":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"bone marrow neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:129203","ICD9:238.79","SCTID:414824005","DOID:4960","MESH:D019046","UMLS:C0282609"],"synonyms":[{"name":"bone marrow cancer","type":"narrow"},{"name":"bone marrow neoplasm","type":"exact"},{"name":"bone marrow neoplasm (disease)","type":"exact"},{"name":"bone marrow tumor","type":"exact"},{"name":"bone marrow tumour","type":"exact"},{"name":"malignant bone marrow tumor","type":"narrow"},{"name":"malignant bone marrow tumour","type":"narrow"},{"name":"neoplasm of bone marrow","type":"exact"},{"name":"tumor of bone marrow","type":"exact"},{"name":"tumour of bone marrow","type":"exact"}],"termid":"MONDO:0005374","terms_by_termid":{"MONDO:0018874":null},"xrefs":{"Monarch":{"xref_id":"0005374"}}}


id: PATO:0000008
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's scalar absolute value of the rate of change of the bearer's position.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Velocity"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement quality","termid":"PATO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speed","synonyms":[{"name":"velocity","type":"related"}],"termid":"PATO:0000008"}


id: MONDO:0011467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete human herpesvirus type 6, integrated (obsolete MONDO:0011467)","secondary_identifiers":["MESH:C565771","OMIM:604474"],"synonyms":[{"name":"human herpesvirus type 6, integrated","type":"exact"}],"termid":"MONDO:0011467","xrefs":{"Monarch":{"xref_id":"0011467"}}}


id: PR:Q9P6I9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cha4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6I9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C1683.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.13c","synonyms":[{"name":"Spom972h-cha4","type":"exact"}],"termid":"PR:Q9P6I9"}


id: PBO:0060295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL6 pseudogene 3","termid":"PBO:0060295"}


id: GO:0020031
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense ring at the most anterior position of the apical complex, from which the conoid fibers originate; formed during an invasive life cycle stage of an apicomplexan parasite.","definition_xrefs":["GOC:mb","PMID:16518471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"apical complex","termid":"GO:0020007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"polar ring of apical complex","synonyms":[{"name":"anterior polar ring of apical complex","type":"exact"},{"name":"upper polar ring of apical complex","type":"exact"}],"termid":"GO:0020031"}


id: GO:0016636
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.","definition_xrefs":["EC:1.3.7.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor","synonyms":[{"name":"oxidoreductase activity, acting on the CH-CH group of donors, iron-sulphur protein as acceptor","type":"exact"}],"termid":"GO:0016636"}


id: PBO:0052781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 19 pseudogene 4","termid":"PBO:0052781"}


id: PBO:0052759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 51","termid":"PBO:0052759"}


id: MONDO:0015140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A progressive dementia with reduction of cognitive functions. It presents the same phenotype as sporadic Alzheimer disease (AD) but has an early age of onset, usually before 60 years old.","definition_xrefs":["Orphanet:1020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"familial Alzheimer disease","termid":"MONDO:0100087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039","MONDO:0000426"],"is_obsolete":false,"name":"early-onset autosomal dominant Alzheimer disease","secondary_identifiers":["GARD:12798"],"synonyms":[{"name":"EOFAD","type":"exact"},{"name":"early-onset familial autosomal dominant Alzheimer disease","type":"exact"},{"name":"early-onset, autosomal dominant Alzheimer disease","type":"related"}],"termid":"MONDO:0015140","xrefs":{"Monarch":{"xref_id":"0015140"}}}


id: PBO:0078028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 18","termid":"PBO:0078028"}


id: GO:0062073
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex composed of a stem-loop binding protein (in most species SLBP) and its interacting partner (SLIP1 or MIF4GD in most species) that binds to the histone mRNA (hmRNA) 3-prime-stem-loop structure. Facilitates hmRNA translation initiation and may also be involved in its processing and nuclear export.","definition_xrefs":["PMID:18025107","PMID:23286197","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"histone mRNA stem-loop binding complex","synonyms":[{"name":"SLBP-MIF4GD complex","type":"narrow"},{"name":"SLBP-SLIP1 complex","type":"narrow"}],"termid":"GO:0062073"}


id: PBO:0062454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 126 pseudogene","termid":"PBO:0062454"}


id: PBO:0079460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-golgi network vesicle protein 23 homolog B","termid":"PBO:0079460"}


id: GO:0015764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of N-acetylglucosamine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"N-acetylglucosamine transport","termid":"GO:0015764"}


id: GO:1905895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to tunicamycin.","definition_xrefs":["GOC:aruk","GOC:TermGenie","GO_REF:0000058","GOC:bc","PMID:21803450"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular response to tunicamycin (obsolete GO:1905895)","synonyms":[{"name":"down regulation of cellular response to tunicamycin","type":"exact"},{"name":"down-regulation of cellular response to tunicamycin","type":"exact"},{"name":"downregulation of cellular response to tunicamycin","type":"exact"},{"name":"inhibition of cellular response to tunicamycin","type":"narrow"}],"termid":"GO:1905895"}


id: PBO:0077693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine kinase non receptor 1","termid":"PBO:0077693"}


id: PBO:0041827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteinyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0041827"}


id: GO:0052470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of the symbiont signal transduction pathways, the cascade of processes by which a signal interacts with a receptor. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont signal transduction pathway (obsolete GO:0052470)","termid":"GO:0052470"}


id: PBO:0070605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 73","termid":"PBO:0070605"}


id: PBO:0052022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Josephin domain containing 2","termid":"PBO:0052022"}


id: PBO:0055515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2949","termid":"PBO:0055515"}


id: FYPO:0005768
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork pausing occurs to a greater extent than normal at ribosomal DNA.","definition_xrefs":["PomBase:mah","PMID:27611590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased replication fork pausing","termid":"FYPO:0005763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"increased replication fork pausing at rDNA","synonyms":[{"name":"increased replication fork pausing at rDNA during mitotic cell cycle","type":"related"},{"name":"increased replication fork pausing at rDNA during vegetative growth","type":"exact"},{"name":"increased replication fork pausing at rRNA genes","type":"exact"},{"name":"increased replication fork pausing at ribosomal DNA","type":"exact"},{"name":"increased replication fork pausing at ribosomal RNA genes","type":"exact"}],"termid":"FYPO:0005768"}


id: PBO:0067006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 12, pseudogene","termid":"PBO:0067006"}


id: MONDO:0001432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sodoku disease (obsolete MONDO:0001432)","termid":"MONDO:0001432","xrefs":{"Monarch":{"xref_id":"0001432"}}}


id: GO:0038153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the C-C chemokine CCL2 to a C-C chemokine type 4 receptor (CCR4) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine (C-C motif) ligand 2 signaling pathway","termid":"GO:0038148"},{"relation_name":"is_a","term_name":"C-C chemokine receptor CCR4 signaling pathway","termid":"GO:0038152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"CCL2-activated CCR4 signaling pathway","synonyms":[{"name":"CCL2/CCR4 signaling pathway","type":"related"}],"termid":"GO:0038153"}


id: PBO:0046913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity E5","termid":"PBO:0046913"}


id: GO:0075225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sporangium germination.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporangium germination","termid":"GO:0075223"},{"relation_name":"is_a","term_name":"negative regulation of sporangium development","termid":"GO:0075312"},{"relation_name":"negatively_regulates","term_name":"sporangium germination","termid":"GO:0075222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sporangium germination","synonyms":[{"name":"negative regulation of sporangium germination on or near host","type":"narrow"}],"termid":"GO:0075225"}


id: MONDO:0019714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic polydactyly, syndactyly and/or hyperphalangy (obsolete MONDO:0019714)","secondary_identifiers":["Orphanet:93458"],"synonyms":[{"name":"isolated polydactyly, syndactyly and/or hyperphalangy","type":"related"},{"name":"nonsyndromic polydactyly, syndactyly and/or hyperphalangy","type":"exact"}],"termid":"MONDO:0019714","xrefs":{"Monarch":{"xref_id":"0019714"}}}


id: PBO:0001443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (uridine) methyltransferase Trm9 (predicted)","termid":"PBO:0001443"}


id: PBO:0027070
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcription_phenotype","termid":"PBO:0027070"}


id: MONDO:0004618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diplegia of upper limb","secondary_identifiers":["MEDGEN:509631","UMLS:C0154701","DOID:862","SCTID:54099005","ICD9:344.2"],"synonyms":[{"name":"diplegia of upper limbs","type":"exact"},{"name":"diplegia, upper","type":"exact"}],"termid":"MONDO:0004618","xrefs":{"Monarch":{"xref_id":"0004618"}}}


id: MONDO:0000069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete multiple endocrine neoplasia (obsolete MONDO:0000069)","termid":"MONDO:0000069","xrefs":{"Monarch":{"xref_id":"0000069"}}}


id: PBO:0088968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atg8 deconjugator Atg4","termid":"PBO:0088968"}


id: GO:1904189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transformation of host cell by virus.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:12200142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of transformation of host cell by virus","termid":"GO:1904187"},{"relation_name":"positively_regulates","term_name":"symbiont-mediated transformation of host cell","termid":"GO:0019087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of transformation of host cell by virus","synonyms":[{"name":"activation of transformation of host cell by virus","type":"narrow"},{"name":"activation of viral transformation","type":"narrow"},{"name":"activation of viral transformation of host cell","type":"narrow"},{"name":"positive regulation of viral transformation","type":"exact"},{"name":"positive regulation of viral transformation of host cell","type":"exact"},{"name":"up regulation of transformation of host cell by virus","type":"exact"},{"name":"up regulation of viral transformation","type":"exact"},{"name":"up regulation of viral transformation of host cell","type":"exact"},{"name":"up-regulation of transformation of host cell by virus","type":"exact"},{"name":"up-regulation of viral transformation","type":"exact"},{"name":"up-regulation of viral transformation of host cell","type":"exact"},{"name":"upregulation of transformation of host cell by virus","type":"exact"},{"name":"upregulation of viral transformation","type":"exact"},{"name":"upregulation of viral transformation of host cell","type":"exact"}],"termid":"GO:1904189"}


id: PBO:0041461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 90","termid":"PBO:0041461"}


id: PBO:0070029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1326, pseudogene","termid":"PBO:0070029"}


id: MONDO:0019805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Twin twin transfusion syndrome (TTTS) is a rare condition seen in twin monochorionic pregnancies, typically developing during the 15-26 week gestation period and usually due to unbalanced intertwin placental anastomoses, where an unequal exchange of blood between twins causes oligohydramnios in one sac and polyhydramnios in the other which can lead to a high perinatal mortality rate and a high rate of disability in survivors if left untreated","definition_xrefs":["Orphanet:95431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal anemia","termid":"MONDO:0001240"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"twin to twin transfusion syndrome","secondary_identifiers":["MedDRA:10058328","MESH:D005330","GARD:325","NCIT:C113824","EFO:1001221","icd11.foundation:850604370","MEDGEN:777055","UMLS:C2909036","DOID:13576","SCTID:13404009","NORD:2021"],"synonyms":[{"name":"Feto-fetal transfusion syndrome","type":"exact"},{"name":"Fetofetal transfusion syndrome","type":"related"},{"name":"TTTS","type":"related"},{"name":"Twin Anemia Polycythemia Sequence","type":"exact"},{"name":"Twin to twin transfusion","type":"exact"},{"name":"Twin-Twin transfusion syndrome","type":"exact"},{"name":"Twin-to-twin blood transfer","type":"exact"},{"name":"fetal blood loss from fetal hemorrhage into co-twin","type":"exact"},{"name":"fetal hemorrhage into co-twin","type":"exact"},{"name":"fetal transfusion syndrome","type":"related"},{"name":"foetal blood loss from foetal haemorrhage into co-twin","type":"exact"},{"name":"foetal haemorrhage into co-twin","type":"exact"},{"name":"foetal transfusion syndrome","type":"related"},{"name":"placental transfusion syndrome","type":"exact"},{"name":"stuck Twin syndrome","type":"exact"},{"name":"twin-to-twin transfusion syndrome","type":"exact"}],"termid":"MONDO:0019805","xrefs":{"Monarch":{"xref_id":"0019805"}}}


id: GO:0023044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which information is sent from one location to another, within a living organism or between living organisms, via a chemical mediator.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signaling via chemical mediator (obsolete GO:0023044)","synonyms":[{"name":"signaling via chemical mediator","type":"exact"},{"name":"signalling via chemical mediator","type":"exact"}],"termid":"GO:0023044"}


id: MOD:00137
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue into L-3-phenyllactic acid.","definition_xrefs":["PubMed:1973541","RESID:AA0128","Unimod:7#F"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3-phenyllactic acid","synonyms":[{"name":"(2S)-2-hydroxy-3-phenylpropanoic acid","type":"exact"},{"name":"Deamidated","type":"related"},{"name":"Deamidation","type":"related"},{"name":"L-3-phenyllactic acid","type":"exact"},{"name":"MOD_RES 3-phenyllactic acid","type":"exact"}],"termid":"MOD:00137"}


id: GO:0006069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An ethanol metabolic process in which ethanol is converted to acetyl-CoA via acetaldehyde and acetate.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ethanol oxidation (obsolete GO:0006069)","termid":"GO:0006069"}


id: GO:0036418
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the mycolate outer membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:md"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of mycolate outer membrane (obsolete GO:0036418)","synonyms":[{"name":"intrinsic to MOM","type":"exact"},{"name":"intrinsic to mycolate outer membrane","type":"narrow"},{"name":"intrinsic to mycomembrane","type":"exact"}],"termid":"GO:0036418"}


id: GO:0015500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (threonine or serine)(out) + Na+(out) = (threonine or serine)(in) + Na+(in).","definition_xrefs":["TC:2.A.23.4.1"],"gene_count":0,"genotype_count":0,"name":"obsolete threonine/serine:sodium symporter activity (obsolete GO:0015500)","synonyms":[{"name":"threonine/serine:sodium symporter activity","type":"exact"}],"termid":"GO:0015500"}


id: MONDO:0016065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate- short stature- vertebral anomalies is a multiple congenital anomalies syndrome described in a father and son characterized by the association of cleft palate, peculiar facies (asymmetrical appearance, inner epicanthal folds, short nose, anteverted nostrils, low and back-oriented ears, thin upper lip and micrognathism), short stature, short neck, vertebral anomalies and intellectual disability. The transmission is presumed to be autosomal dominant. There have been no further descriptions in the literature since 1993.","definition_xrefs":["Orphanet:2015"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate-short stature-vertebral anomalies syndrome","secondary_identifiers":["SCTID:719466009","MEDGEN:930373","UMLS:C4304704","GARD:1392"],"synonyms":[{"name":"Mathieu-De Broca-Bony syndrome","type":"exact"},{"name":"cleft palate short stature vertebral anomalies","type":"related"}],"termid":"MONDO:0016065","xrefs":{"Monarch":{"xref_id":"0016065"}}}


id: PBO:0083917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Formin inhibitor; negatively regulates Bnr1-mediated actin filament nucleation but not filament elongation; performs distinct but overlapping roles with Hof1p to control actin cable assembly and polarized secretion; bnr1 bil2 double mutants are inviable; localizes to the cytosol, secretory vesicles and sites of polarized growth","termid":"PBO:0083917"}


id: PBO:0054532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1932","termid":"PBO:0054532"}


id: MONDO:0002721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ischemic or hemorrhagic necrosis of the pituitary gland.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pituitary gland disorder","termid":"MONDO:0003381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrosis of pituitary","secondary_identifiers":["SCTID:59572000","MEDGEN:124404","NCIT:C27066","UMLS:C0271558","DOID:3646"],"synonyms":[{"name":"pituitary gland Necrosis","type":"exact"},{"name":"pituitary necrosis","type":"exact"}],"termid":"MONDO:0002721","xrefs":{"Monarch":{"xref_id":"0002721"}}}


id: PR:O94724
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1393.12 gene.","definition_xrefs":["UniProtKB:O94724","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1393.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.12","synonyms":[{"name":"Spom972h-SPCC1393.12","type":"exact"}],"termid":"PR:O94724"}


id: MOD:00491
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:11861642","Unimod:119#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"thio ether formation - BTP Adduct","synonyms":[{"name":"IBTP","type":"related"},{"name":"Thio Ether Formation - BTP Adduct","type":"related"}],"termid":"MOD:00491"}


id: PBO:0057628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1203","termid":"PBO:0057628"}


id: FYPO:0007495
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the Mei2 nuclear dot is normal (i.e. indistinguishable from wild type). The Mei2 nuclear dot is a nuclear body that contains Mei2, other proteins, and meiRNA, and forms during meiotic prophase in a fixed position in the horsetail nucleus.","definition_xrefs":["PomBase:mah","PMID:24920274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to Mei2 nuclear dot","synonyms":[{"name":"normal protein localisation to Mei2 nuclear dot","type":"exact"},{"name":"normal protein localization to meiRNA nuclear dot","type":"related"}],"termid":"FYPO:0007495"}


id: GO:0031466
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul5 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by an elongin-BC adaptor and a SOCS/BC box protein.","definition_xrefs":["PMID:15571813","PMID:15688063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Cul5-RING ubiquitin ligase complex","synonyms":[{"name":"CDL5 complex","type":"exact"},{"name":"CRL5 complex","type":"exact"},{"name":"EC2S complex","type":"broad"},{"name":"SCF5 complex","type":"related"},{"name":"cullin-RING ligase 5","type":"exact"}],"termid":"GO:0031466"}


id: MONDO:0017511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Split hand, unilateral is a rare, non-syndromic limb reduction defect, clinically and genetically heterogeneous, characterized by unilateral underdevelopment or absence of the central rays of the autopod, with absence of all, or just some, of the central phalanges and at least part of the associated metacarpal bones, yielding a cleft appearance of the hand. It is frequently associated with syndactyly and aplasia/hypoplasia of remaining digits and metacarpal bones. No other dysmorphic features are observed and development is appropriate for age.","definition_xrefs":["Orphanet:295120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"split hand","termid":"MONDO:0017449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"split hand, unilateral","secondary_identifiers":["icd11.foundation:1675694993"],"termid":"MONDO:0017511","xrefs":{"Monarch":{"xref_id":"0017511"}}}


id: GO:0032451
data:
  {"annotated_genes":["SJAG_03664","SJAG_03997","SJAG_00892","SJAG_03635","SJAG_03286","SJAG_02401","SJAG_03750","SJAG_03041"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72181,89244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051864"},{"annotations":[68275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140680"},{"annotations":[71878,76715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"},{"annotations":[72178,119770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032454"},{"annotations":[61241,95970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140683"},{"annotations":[90340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008398"},{"annotations":[105034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990984"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a substrate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity","termid":"GO:0003824"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00892":null,"SJAG_02401":null,"SJAG_03041":null,"SJAG_03286":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03750":null,"SJAG_03997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674"],"is_obsolete":false,"name":"demethylase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0032451","terms_by_termid":{"GO:0008398":null,"GO:0032454":null,"GO:0034647":null,"GO:0051864":null,"GO:0140680":null,"GO:0140683":null,"GO:1990984":null}}


id: PBO:0060468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-protein coding RNA, associated with MAP kinase pathway and growth arrest","termid":"PBO:0060468"}


id: SO:0000115
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000115 transcript_feature (obsolete SO:0000115)","termid":"SO:0000115"}


id: GO:1902339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptotic process involved in morphogenesis.","definition_xrefs":["PMID:12202035","GOC:TermGenie","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in morphogenesis","termid":"GO:1902337"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in development","termid":"GO:1904747"},{"relation_name":"positively_regulates","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic process involved in morphogenesis","synonyms":[{"name":"activation of apoptosis involved in development","type":"related"},{"name":"activation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"activation of apoptotic process involved in morphogenesis","type":"narrow"},{"name":"activation of morphogenetic apoptosis","type":"related"},{"name":"positive regulation of apoptosis involved in development","type":"related"},{"name":"positive regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"positive regulation of morphogenetic apoptosis","type":"related"},{"name":"up regulation of apoptosis involved in development","type":"related"},{"name":"up regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"up regulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"up regulation of morphogenetic apoptosis","type":"related"},{"name":"up-regulation of apoptosis involved in development","type":"related"},{"name":"up-regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"up-regulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"up-regulation of morphogenetic apoptosis","type":"related"},{"name":"upregulation of apoptosis involved in development","type":"related"},{"name":"upregulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"upregulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"upregulation of morphogenetic apoptosis","type":"related"}],"termid":"GO:1902339"}


id: MONDO:0000057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete medullary cystic kidney disease (obsolete MONDO:0000057)","termid":"MONDO:0000057","xrefs":{"Monarch":{"xref_id":"0000057"}}}


id: MONDO:0002627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteosarcoma characterized by the presence of atypical cartilage of variable cellularity. It may or may not be associated with the presence of myxoid areas or focal bone formation.","definition_xrefs":["NCIT:C4021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conventional osteosarcoma","termid":"MONDO:0002631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"chondroblastic osteosarcoma","secondary_identifiers":["ICDO:9181/3","DOID:3372","UMLS:C0279603","ONCOTREE:CHOS","MEDGEN:79013"],"synonyms":[{"name":"CHOS","type":"related"},{"name":"chondroblastic osteogenic sarcoma","type":"exact"},{"name":"chondroblastic osteosarcoma","type":"exact"},{"name":"chondroblastic osteosarcoma (morphologic abnormality)","type":"exact"},{"name":"chondrosarcomatous osteogenic sarcoma","type":"exact"}],"termid":"MONDO:0002627","xrefs":{"Monarch":{"xref_id":"0002627"}}}


id: PBO:0041009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BORCS8 pseudogene 1","termid":"PBO:0041009"}


id: GO:0071258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gravitational stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to gravity","termid":"GO:0009629"},{"relation_name":"is_a","term_name":"cellular response to abiotic stimulus","termid":"GO:0071214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to gravity","synonyms":[{"name":"cellular response to gravitational stimulus","type":"exact"}],"termid":"GO:0071258"}


id: MONDO:0009763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypoventilation syndrome in very obese persons with excessive adipose tissue around the abdomen and diaphragm is characterized by diminished to absent ventilatory chemoresponsiveness; chronic hypoxia; hypercapnia; polycythemia; and long periods of sleep during day and night (hypersomnolence). It is a condition often related to obstructive sleep apnea but can occur separately.","definition_xrefs":["MESH:D010845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obesity-hypoventilation syndrome","secondary_identifiers":["SCTID:190966007","UMLS:C0031880","NANDO:1200752","EFO:1001382","OMIM:257500","ICD9:786.09","MEDGEN:18472"],"synonyms":[{"name":"Pickwickian syndrome","type":"related"},{"name":"obesity-hypoventilation syndrome","type":"exact"}],"termid":"MONDO:0009763","xrefs":{"Monarch":{"xref_id":"0009763"}}}


id: CHEBI:17191
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoleucine","termid":"CHEBI:17191"}


id: FYPO:0001631
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-leucine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular leucine level","termid":"FYPO:0001640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal vacuolar leucine level","synonyms":[{"name":"normal level of leucine in vacuole","type":"exact"},{"name":"normal vacuolar L-leucine level","type":"exact"},{"name":"normal vacuolar leucine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar leucine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001631"}


id: GO:0019432
data:
  {"annotated_genes":["SJAG_04041","SJAG_02763","SJAG_03162","SJAG_03609"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73134,76331,78832,91905],"is_not":false,"summary":null,"term":"GO:0019432"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a triglyceride, any triester of glycerol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride metabolic process","termid":"GO:0006641"},{"relation_name":"is_a","term_name":"acylglycerol biosynthetic process","termid":"GO:0046463"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03162":null,"SJAG_03609":null,"SJAG_04041":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"triglyceride biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-75109","MetaCyc:TRIGLSYN-PWY"],"synonyms":[{"name":"triacylglycerol biosynthesis","type":"exact"},{"name":"triacylglycerol biosynthetic process","type":"exact"},{"name":"triglyceride anabolism","type":"exact"},{"name":"triglyceride biosynthesis","type":"exact"},{"name":"triglyceride formation","type":"exact"},{"name":"triglyceride synthesis","type":"exact"}],"termid":"GO:0019432","terms_by_termid":{"GO:0019432":null}}


id: MONDO:0000508
data:
  {"annotated_genes":["SJAG_03635","SJAG_02286","SJAG_02523","SJAG_03353","SJAG_02774","SJAG_03681","SJAG_02629","SJAG_04755","SJAG_01926","SJAG_01448","SJAG_04631","SJAG_05313","SJAG_00466","SJAG_04056","SJAG_00156","SJAG_03286","SJAG_03664","SJAG_01047","SJAG_00992","SJAG_01465","SJAG_04235","SJAG_02371","SJAG_04980","SJAG_01540","SJAG_00293","SJAG_05239","SJAG_04176","SJAG_02855","SJAG_00379","SJAG_03900","SJAG_01581","SJAG_02165"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014558"},{"annotations":[88768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010477"},{"annotations":[87645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013644"},{"annotations":[88747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010441"},{"annotations":[87705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010561"},{"annotations":[88099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010333"},{"annotations":[87747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013578"},{"annotations":[88988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010590"},{"annotations":[87099,87100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014602"},{"annotations":[88704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015022"},{"annotations":[88544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044319"},{"annotations":[88282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013805"},{"annotations":[87428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014832"},{"annotations":[86901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010407"},{"annotations":[87137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010500"},{"annotations":[87125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030908"},{"annotations":[87746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030909"},{"annotations":[88062,88063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011053"},{"annotations":[88305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010258"},{"annotations":[87781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010671"},{"annotations":[88734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010457"},{"annotations":[87365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011213"},{"annotations":[89079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010398"},{"annotations":[88724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010574"},{"annotations":[88911,88912,88910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010355"},{"annotations":[88738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010461"},{"annotations":[88508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010286"},{"annotations":[86891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010665"},{"annotations":[86860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010655"},{"annotations":[87974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010306"},{"annotations":[87741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015601"},{"annotations":[87131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010496"}]},"cv_name":"mondo","definition":"A intellectual disability that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00156":null,"SJAG_00293":null,"SJAG_00379":null,"SJAG_00466":null,"SJAG_00992":null,"SJAG_01047":null,"SJAG_01448":null,"SJAG_01465":null,"SJAG_01540":null,"SJAG_01581":null,"SJAG_01926":null,"SJAG_02165":null,"SJAG_02286":null,"SJAG_02371":null,"SJAG_02523":null,"SJAG_02629":null,"SJAG_02774":null,"SJAG_02855":null,"SJAG_03286":null,"SJAG_03353":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03681":null,"SJAG_03900":null,"SJAG_04056":null,"SJAG_04176":null,"SJAG_04235":null,"SJAG_04631":null,"SJAG_04755":null,"SJAG_04980":null,"SJAG_05239":null,"SJAG_05313":null},"genotype_count":0,"is_obsolete":false,"name":"syndromic intellectual disability","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5680525","DOID:0050888","MEDGEN:1842178"],"synonyms":[{"name":"syndrome associated with intellectual disability","type":"exact"},{"name":"syndromic intellectual disability","type":"exact"}],"termid":"MONDO:0000508","terms_by_termid":{"MONDO:0010258":null,"MONDO:0010286":null,"MONDO:0010306":null,"MONDO:0010333":null,"MONDO:0010355":null,"MONDO:0010398":null,"MONDO:0010407":null,"MONDO:0010441":null,"MONDO:0010457":null,"MONDO:0010461":null,"MONDO:0010477":null,"MONDO:0010496":null,"MONDO:0010500":null,"MONDO:0010561":null,"MONDO:0010574":null,"MONDO:0010590":null,"MONDO:0010655":null,"MONDO:0010665":null,"MONDO:0010671":null,"MONDO:0011053":null,"MONDO:0011213":null,"MONDO:0013578":null,"MONDO:0013644":null,"MONDO:0013805":null,"MONDO:0014558":null,"MONDO:0014602":null,"MONDO:0014832":null,"MONDO:0015022":null,"MONDO:0015601":null,"MONDO:0030908":null,"MONDO:0030909":null,"MONDO:0044319":null},"xrefs":{"Monarch":{"xref_id":"0000508"}}}


id: PBO:0064246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase D family member 5","termid":"PBO:0064246"}


id: MONDO:0000317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete foodborne botulism (obsolete MONDO:0000317)","termid":"MONDO:0000317","xrefs":{"Monarch":{"xref_id":"0000317"}}}


id: MONDO:0008786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sideroblastic anemia","termid":"MONDO:0015194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"pyridoxine-responsive sideroblastic anemia","secondary_identifiers":["UMLS:C1859787","SCTID:191260004","DOID:0060066","MESH:C565954","OMIM:206000","MEDGEN:395346"],"synonyms":[{"name":"B6-responsive sideroblastic anaemia","type":"related"},{"name":"B6-responsive sideroblastic anemia","type":"related"},{"name":"anaemia congenital sideroblastic B6-responsive","type":"related"},{"name":"anemia congenital sideroblastic B6-responsive","type":"related"},{"name":"anemia, congenital sideroblastic, B6-responsive","type":"related"},{"name":"anemia, sideroblastic, pyridoxine-responsive, autosomal recessive","type":"related"},{"name":"sideroblastic anaemia pyridoxine-responsive autosomal recessive","type":"related"},{"name":"sideroblastic anemia pyridoxine-responsive autosomal recessive","type":"related"}],"termid":"MONDO:0008786","xrefs":{"Monarch":{"xref_id":"0008786"}}}


id: PBO:0075017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-28","termid":"PBO:0075017"}


id: PBO:0040880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 5","termid":"PBO:0040880"}


id: GO:1904513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of initiation of premeiotic DNA replication.","definition_xrefs":["GOC:TermGenie","PMID:25891897","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated DNA replication initiation","termid":"GO:0032297"},{"relation_name":"is_a","term_name":"negative regulation of meiotic cell cycle","termid":"GO:0051447"},{"relation_name":"is_a","term_name":"negative regulation of nuclear cell cycle DNA replication","termid":"GO:1902576"},{"relation_name":"is_a","term_name":"regulation of initiation of premeiotic DNA replication","termid":"GO:1904512"},{"relation_name":"negatively_regulates","term_name":"meiotic DNA replication initiation","termid":"GO:1902974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0006259","GO:0006260"],"is_obsolete":false,"name":"negative regulation of initiation of premeiotic DNA replication","synonyms":[{"name":"down regulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"down regulation of initiation of premeiotic DNA replication","type":"exact"},{"name":"down regulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"down regulation of meiotic DNA replication initiation","type":"related"},{"name":"down regulation of premeiotic DNA replication initiation","type":"exact"},{"name":"down-regulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"down-regulation of initiation of premeiotic DNA replication","type":"exact"},{"name":"down-regulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"down-regulation of meiotic DNA replication initiation","type":"related"},{"name":"down-regulation of premeiotic DNA replication initiation","type":"exact"},{"name":"downregulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"downregulation of initiation of premeiotic DNA replication","type":"exact"},{"name":"downregulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"downregulation of meiotic DNA replication initiation","type":"related"},{"name":"downregulation of premeiotic DNA replication initiation","type":"exact"},{"name":"inhibition of initiation of meiotic DNA synthesis","type":"related"},{"name":"inhibition of initiation of premeiotic DNA replication","type":"narrow"},{"name":"inhibition of initiation of premeiotic DNA synthesis","type":"related"},{"name":"inhibition of meiotic DNA replication initiation","type":"related"},{"name":"inhibition of premeiotic DNA replication initiation","type":"narrow"},{"name":"negative regulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"negative regulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"negative regulation of meiotic DNA replication initiation","type":"related"},{"name":"negative regulation of premeiotic DNA replication initiation","type":"exact"}],"termid":"GO:1904513"}


id: PBO:0032714
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_error-free_translesion_synthesis","termid":"PBO:0032714"}


id: GO:0052177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving xylan within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of host xylan (obsolete GO:0052177)","termid":"GO:0052177"}


id: MONDO:0017968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"46,XY ovotesticular disorder of sex development is a rare, genetic disorder of sex development characterized by either the coexistence of both male and female reproductive gonads or, more frequently, by the presence of one or both gonads containing a mixture of both testicular and ovarian tissue (ovotestes) in an individual with a normal male 46, XY karyotype. External genitalia are usually ambiguous, but can range from normal male to normal female and if a uterus and/or fallopian tubes are present, they are generally hypoplastic. Cryptorchidism, hypospadias, infertility and increased risk of gonadal tumors are frequently associated.","definition_xrefs":["Orphanet:325345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"46,XY ovotesticular disorder of sex development","secondary_identifiers":["GARD:21469","SCTID:763683004","UMLS:C2697358","MEDGEN:394582"],"synonyms":[{"name":"46,XY ovotesticular DSD","type":"exact"}],"termid":"MONDO:0017968","xrefs":{"Monarch":{"xref_id":"0017968"}}}


id: PBO:0077697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tankyrase 1 binding protein 1","termid":"PBO:0077697"}


id: GO:0035399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Positive regulation of a B cell mediated immune response mediated via cytokine production by a helper T cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of B cell mediated immunity","termid":"GO:0002714"},{"relation_name":"is_a","term_name":"helper T cell enhancement of adaptive immune response","termid":"GO:0035397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"helper T cell enhancement of B cell mediated immune response","synonyms":[{"name":"helper T cell enhancement of B cell mediated immunity","type":"exact"},{"name":"provision of T cell help to B cell","type":"exact"}],"termid":"GO:0035399"}


id: FYPO:0000341
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a single functional copy of a gene provides sufficient normal function in a diploid cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"haplosufficient","synonyms":[{"name":"haplosufficient during mitotic cell cycle","type":"related"},{"name":"haplosufficient during vegetative growth","type":"exact"}],"termid":"FYPO:0000341"}


id: GO:0008267
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a polyglutamine tract, i.e. a series of consecutive glutamine residues, in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"poly-glutamine tract binding","termid":"GO:0008267"}


id: PBO:0089046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug130","termid":"PBO:0089046"}


id: GO:0030473
data:
  {"annotated_genes":["SJAG_01863","SJAG_00113","SJAG_04597","SJAG_02431","SJAG_00397","SJAG_02045","SJAG_04001","SJAG_03673","SJAG_01370","SJAG_00368","SJAG_02737","SJAG_02561","SJAG_02286","SJAG_03073","SJAG_05185","SJAG_00140","SJAG_01613","SJAG_01662","SJAG_04143"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105191,104900,97110,92867,99491,93728,115943,118954,113037,93264,102652,113388,89614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[108546,103366,113211],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[101149,99566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[89618,78100,101150,93266,99493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[96301],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902854"}]},"cv_name":"biological_process","definition":"The directed movement of the nucleus along microtubules within the cell, mediated by motor proteins.","definition_xrefs":["GOC:sgd_curators","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"is_a","term_name":"organelle transport along microtubule","termid":"GO:0072384"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_01370":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01863":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02431":null,"SJAG_02561":null,"SJAG_02737":null,"SJAG_03073":null,"SJAG_03673":null,"SJAG_04001":null,"SJAG_04143":null,"SJAG_04597":null,"SJAG_05185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"nuclear migration along microtubule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000065"],"synonyms":[{"name":"microtubule cytoskeleton-dependent nuclear positioning","type":"exact"},{"name":"microtubule cytoskeleton-dependent nucleus positioning","type":"exact"},{"name":"microtubule-dependent nuclear positioning","type":"exact"},{"name":"microtubule-dependent nucleus positioning","type":"exact"},{"name":"microtubule-mediated nuclear migration","type":"exact"},{"name":"nuclear migration, microtubule-mediated","type":"exact"},{"name":"nuclear movement, microtubule-mediated","type":"broad"},{"name":"nucleus migration","type":"broad"},{"name":"transport of nucleus by microtubules","type":"exact"},{"name":"transport of nucleus, microtubule-mediated","type":"exact"}],"termid":"GO:0030473","terms_by_termid":{"GO:0000743":null,"GO:0030989":null,"GO:0032118":null,"GO:0090561":null,"GO:1902854":null}}


id: PBO:0041267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q C chain","termid":"PBO:0041267"}


id: MONDO:0018947
data:
  {"annotated_genes":["SJAG_03248","SJAG_00185"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009709"},{"annotations":[87277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010683"}]},"cv_name":"mondo","definition":"Centronuclear myopathy (CNM) is an inherited neuromuscular disorder characterized by clinical features of a congenital myopathy and centrally placed nuclei on muscle biopsy.","definition_xrefs":["Orphanet:595"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare disorder with ptosis (obsolete MONDO:0020169)","termid":"MONDO:0020169"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00185":null,"SJAG_03248":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"centronuclear myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:742097637","NCIT:C84648","MEDGEN:104495","UMLS:C0175709","DOID:14717","NANDO:1200481","NANDO:2200867","MESH:D020914","OMIMPS:160150","SCTID:82077006","GARD:101","NANDO:1200482","NORD:909"],"synonyms":[{"name":"CNM","type":"exact"},{"name":"centronuclear myopathy","type":"exact"},{"name":"myopathy, centronuclear","type":"exact"},{"name":"myopathy, myotubular","type":"related"},{"name":"myotubular myopathy","type":"exact"}],"termid":"MONDO:0018947","terms_by_termid":{"MONDO:0009709":null,"MONDO:0010683":null},"xrefs":{"Monarch":{"xref_id":"0018947"}}}


id: PBO:0059927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 13","termid":"PBO:0059927"}


id: PBO:0048466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCLC antisense RNA 1","termid":"PBO:0048466"}


id: PBO:0002639
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.3.4","termid":"PBO:0002639"}


id: GO:0047606
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a (S)-hydroxynitrile = hydrogen cyanide + an aldehyde or ketone.","definition_xrefs":["EC:4.1.2.47","PMID:3377504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"(S)-hydroxynitrile lyase activity","secondary_identifiers":["GO:0046991"],"synonyms":[{"name":"alpha-hydroxynitrile lyase activity","type":"narrow"},{"name":"hydroxynitrilase activity","type":"broad"},{"name":"hydroxynitrile lyase activity","type":"exact"},{"name":"oxynitrilase activity","type":"related"}],"termid":"GO:0047606"}


id: GO:0052402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of the resistance gene-dependent defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of symbiont resistance gene-dependent defense response (obsolete GO:0052402)","synonyms":[{"name":"activation by organism of defense response in symbiont by specific elicitors","type":"exact"},{"name":"activation by organism of pathogen-race/symbiont plant cultivar-specific resistance in symbiont","type":"exact"},{"name":"activation by organism of symbiont gene-for-gene resistance","type":"exact"},{"name":"activation by organism of symbiont resistance gene-dependent defense response","type":"exact"},{"name":"induction by organism of defense response in symbiont by specific elicitors","type":"exact"},{"name":"induction by organism of pathogen-race/symbiont plant cultivar-specific resistance in symbiont","type":"exact"},{"name":"induction by organism of symbiont gene-for-gene resistance","type":"exact"},{"name":"induction by organism of symbiont resistance gene-dependent defense response","type":"exact"}],"termid":"GO:0052402"}


id: MONDO:0012492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"restless legs syndrome, susceptibility to","termid":"MONDO:0100170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restless legs syndrome, susceptibility to, 3","secondary_identifiers":["UMLS:C1864875","MEDGEN:355315","OMIM:610438"],"synonyms":[{"name":"RLS3","type":"exact"},{"name":"restless legs syndrome 3","type":"exact"},{"name":"restless legs syndrome, susceptibility to, 3","type":"exact"}],"termid":"MONDO:0012492","xrefs":{"Monarch":{"xref_id":"0012492"}}}


id: PBO:0066739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 36","termid":"PBO:0066739"}


id: MONDO:1012589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocutaneous albinism that occurs in Japanese medaka due to a mutation in the TYR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, TYR-related, Japanese medaka","secondary_identifiers":["OMIA:000202-8090"],"synonyms":[{"name":"coat/skin colour, oculocutaneous albinism type I (OCA1), TYR-related in Oryzias latipes (Japanese medaka)","type":"exact"}],"termid":"MONDO:1012589","xrefs":{"Monarch":{"xref_id":"1012589"}}}


id: PBO:0067224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 293, pseudogene","termid":"PBO:0067224"}


id: MONDO:0958242
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 90","secondary_identifiers":["MEDGEN:1853928","DOID:0070589","OMIM:620744","UMLS:C5935587"],"termid":"MONDO:0958242","xrefs":{"Monarch":{"xref_id":"0958242"}}}


id: PBO:0091565
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin-Like Protein","termid":"PBO:0091565"}


id: GO:0046909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of substances between any membrane of a cell, including the plasma membrane and its regions.","definition_xrefs":["GOC:pr","PMID:10671554","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete intermembrane transport (obsolete GO:0046909)","termid":"GO:0046909"}


id: PBO:0028508
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transposable_element-derived_small_RNA_level","termid":"PBO:0028508"}


id: PBO:0087133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein involved in synthesis of 18S and 5.8S rRNAs; component of ribosomal small subunit (SSU) processome and 90S preribosome; required for pre-rRNA packaging and compaction of processome into dense terminal balls; part of Mak21p-Noc2p-Rrp5p module that associates with nascent pre-rRNA during transcription with role in biogenesis of large ribosomal subunit; binds single stranded tracts of U's; relocalizes from nucleolus to nucleus upon DNA replication stress","termid":"PBO:0087133"}


id: MONDO:1012307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous papillomatosis, non-human animal","termid":"MONDO:1011741"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutaneous papillomatosis, cattle","secondary_identifiers":["OMIA:001147-9913"],"termid":"MONDO:1012307","xrefs":{"Monarch":{"xref_id":"1012307"}}}


id: PBO:0080198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox pseudogene 6","termid":"PBO:0080198"}


id: PR:O42895
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- afg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C115.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC115.02c","synonyms":[{"name":"Spom972h-afg1","type":"exact"}],"termid":"PR:O42895"}


id: PBO:0027169
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_DNA_replication_initiation","termid":"PBO:0027169"}


id: GO:0032799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving low-density lipoprotein receptors.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor metabolic process","termid":"GO:0043112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"low-density lipoprotein receptor particle metabolic process","synonyms":[{"name":"LDL receptor metabolic process","type":"exact"},{"name":"low-density lipoprotein receptor metabolic process","type":"exact"},{"name":"low-density lipoprotein receptor metabolism","type":"exact"}],"termid":"GO:0032799"}


id: SO:0000640
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-coding regions of DNA that precede the sequence that codes for the ribosomal RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcribed_spacer_region","termid":"SO:0000638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"external_transcribed_spacer_region","synonyms":[{"name":"external transcribed spacer region","type":"exact"}],"termid":"SO:0000640"}


id: MONDO:0001785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"secondary hypertension","termid":"MONDO:0001200"},{"relation_name":"is_a","term_name":"malignant hypertension","termid":"MONDO:0006846"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant secondary hypertension","secondary_identifiers":["UMLS:C0155617","SCTID:89242004","ICD9:405.0","MEDGEN:510039","DOID:13731","ICD9:405.09"],"termid":"MONDO:0001785","xrefs":{"Monarch":{"xref_id":"0001785"}}}


id: PBO:0047970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FREM2 antisense RNA 1","termid":"PBO:0047970"}


id: PBO:0069113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 362, pseudogene","termid":"PBO:0069113"}


id: PBO:0002495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex associated protein Kti2 (predicted)","termid":"PBO:0002495"}


id: PBO:0116685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 14 effector protein like","termid":"PBO:0116685"}


id: PR:Q09858
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nnf1 gene.","definition_xrefs":["UniProtKB:Q09858","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein nnf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.04","synonyms":[{"name":"NMS complex subunit nnf1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-nnf1","type":"exact"}],"termid":"PR:Q09858"}


id: MONDO:0013251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Birbeck granule deficiency","secondary_identifiers":["OMIM:613393","UMLS:C3150657","MEDGEN:462007"],"synonyms":[{"name":"Birbeck granule deficiency","type":"exact"},{"name":"Birbeck granules, absence of","type":"related"}],"termid":"MONDO:0013251","xrefs":{"Monarch":{"xref_id":"0013251"}}}


id: PBO:0055682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase family member K","termid":"PBO:0055682"}


id: GO:0039632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive movement along a single- or double-stranded RNA molecule, which contributes to the packaging of viral RNA into a nucleocapsid.","definition_xrefs":["GOC:bm","PMID:22297533"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA translocase activity involved in viral RNA genome packaging (obsolete GO:0039632)","synonyms":[{"name":"RNA packaging ATPase activity","type":"exact"},{"name":"viral RNA packaging activity","type":"related"}],"termid":"GO:0039632"}


id: PBO:0085532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S30, no bacterial homolog; RPS30A has a paralog, RPS30B, that arose from the whole genome duplication","termid":"PBO:0085532"}


id: PBO:0047193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 210 member A","termid":"PBO:0047193"}


id: PBO:0028879
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H2B-K119_ubiquitination","termid":"PBO:0028879"}


id: MONDO:0016162
data:
  {"annotated_genes":["SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012399"}]},"cv_name":"mondo","definition":"Bilateral frontal polymicrogyria is one of the rarest subtypes of polymicrogyria. It is a symmetric and bilateral form (in both brain hemispheres) that only involves the frontal lobes without including the area located behind the Sylvius fissure or the area located behind the Rolando sulcus. Some researchers classify the condition into two different forms: bilateral frontal polymicrogyriaand the bilateral frontoparietal. Signs and symptoms included delayed motor and language milestones; spastic (stiffness) hemiparesis (weakness in one side of the body) or quadriparesis (weakness in all four limbs of the body); and mild to moderate intellectual disability. Seizures mayalsobe present. The frontoparietal form is caused by changes (mutations) in the GPR56 gene but the cause for the frontal form of polymicrogyira is still not known. Treatment is based on the signs and symptoms present in each person.","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral polymicrogyria","termid":"MONDO:0017091"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"bilateral frontal polymicrogyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080921","Orphanet:208444","icd11.foundation:688947844","MEDGEN:1754014","UMLS:C5437679","GARD:10783"],"termid":"MONDO:0016162","terms_by_termid":{"MONDO:0012399":null},"xrefs":{"Monarch":{"xref_id":"0016162"}}}


id: MOD:00921
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"New uncategorized Unimod. OBSOLETE because organizational use is no longer required.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00921 new uncategorized Unimod entries (obsolete MOD:00921)","termid":"MOD:00921"}


id: PBO:0080599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 33","termid":"PBO:0080599"}


id: PBO:0068252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal N4","termid":"PBO:0068252"}


id: PBO:0056156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mono-ADP ribosylhydrolase 1","termid":"PBO:0056156"}


id: PBO:0067624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 796, pseudogene","termid":"PBO:0067624"}


id: PBO:0001988
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.4.1.13","termid":"PBO:0001988"}


id: PBO:0063431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 5","termid":"PBO:0063431"}


id: GO:1902018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cilium assembly.","definition_xrefs":["GOC:cilia","GOC:TermGenie","GOC:dph","PMID:17719545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120033"},{"relation_name":"is_a","term_name":"regulation of cilium assembly","termid":"GO:1902017"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"negatively_regulates","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cilium assembly","synonyms":[{"name":"down regulation of ciliogenesis","type":"exact"},{"name":"down regulation of cilium assembly","type":"exact"},{"name":"down regulation of cilium biogenesis","type":"related"},{"name":"down-regulation of ciliogenesis","type":"exact"},{"name":"down-regulation of cilium assembly","type":"exact"},{"name":"down-regulation of cilium biogenesis","type":"related"},{"name":"downregulation of ciliogenesis","type":"exact"},{"name":"downregulation of cilium assembly","type":"exact"},{"name":"downregulation of cilium biogenesis","type":"related"},{"name":"inhibition of ciliogenesis","type":"exact"},{"name":"inhibition of cilium assembly","type":"narrow"},{"name":"inhibition of cilium biogenesis","type":"related"},{"name":"negative regulation of ciliogenesis","type":"exact"},{"name":"negative regulation of cilium biogenesis","type":"related"}],"termid":"GO:1902018"}


id: MONDO:0003338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete von Economo disease (obsolete MONDO:0003338)","synonyms":[{"name":"obsolete von Economo's disease","type":"exact"}],"termid":"MONDO:0003338","xrefs":{"Monarch":{"xref_id":"0003338"}}}


id: FYPO:0000064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of 2-deoxyglucose than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002682","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"resistance to 2-deoxyglucose","synonyms":[{"name":"resistance to 2-DOG","type":"exact"},{"name":"resistance to 2-deoxyglucose during mitotic cell cycle","type":"related"},{"name":"resistance to 2-deoxyglucose during vegetative growth","type":"exact"},{"name":"resistant to 2-DOG","type":"exact"},{"name":"resistant to 2-deoxy-D-glucose","type":"exact"}],"termid":"FYPO:0000064"}


id: PBO:0076417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 9b","termid":"PBO:0076417"}


id: PBO:0005529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human ATXN10 ortholog, implicated in amino acid biosynthesis","termid":"PBO:0005529"}


id: PBO:0055951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 59","termid":"PBO:0055951"}


id: PBO:0034073
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_many_to_many_homology_relationship_with","termid":"PBO:0034073"}


id: MONDO:0017591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic interstitial pneumonia","termid":"MONDO:0002429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"combined pulmonary fibrosis-emphysema syndrome","secondary_identifiers":["GARD:21238","icd11.foundation:1361267223","UMLS:C3872815","MEDGEN:838971","Orphanet:300564"],"synonyms":[{"name":"CPFE","type":"exact"}],"termid":"MONDO:0017591","xrefs":{"Monarch":{"xref_id":"0017591"}}}


id: PBO:0007604
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during meiosis I","termid":"PBO:0007604"}


id: FYPO:0002389
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at centromere outer repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21151114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to centromeric heterochromatin","termid":"FYPO:0008154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to heterochromatin at centromere outer repeat","secondary_identifiers":["FYPO:0005081"],"synonyms":[{"name":"normal protein localisation to chromatin at centromere outer repeat","type":"exact"},{"name":"normal protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"normal protein localization at centromere otr","type":"exact"},{"name":"normal protein localization at centromeric outer repeat region","type":"exact"},{"name":"normal protein localization at pericentric region","type":"related"},{"name":"normal protein localization at pericentromeric region","type":"related"},{"name":"normal protein localization to centromere outer repeat heterochromatin","type":"exact"},{"name":"normal protein localization to chromatin at centromere otr","type":"exact"},{"name":"normal protein localization to chromatin at centromere outer repeat","type":"exact"},{"name":"normal protein localization to chromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at centromere outer repeat during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at centromeric outer repeat","type":"exact"},{"name":"normal protein localization to chromatin at pericentric region","type":"related"},{"name":"normal protein localization to chromatin at pericentromeric region","type":"related"},{"name":"normal protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002389"}


id: GO:0090316
data:
  {"annotated_genes":["SJAG_03048","SJAG_04312","SJAG_03453","SJAG_02592","SJAG_01245","SJAG_01805","SJAG_04464"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112998,102363,95691,103783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[104318,92722,96259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of proteins within cells.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"positive regulation of protein transport","termid":"GO:0051222"},{"relation_name":"positively_regulates","term_name":"intracellular protein transport","termid":"GO:0006886"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_04312":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of intracellular protein transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090316","terms_by_termid":{"GO:0042307":null,"GO:0046827":null}}


id: PBO:0076137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUCLA2 pseudogene 2","termid":"PBO:0076137"}


id: PBO:0045775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ECRG4 augurin precursor","termid":"PBO:0045775"}


id: PBO:0027333
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_cellular_response_to_menadione","termid":"PBO:0027333"}


id: GO:0010313
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phytochrome.","definition_xrefs":["PMID:15486102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"phytochrome binding","termid":"GO:0010313"}


id: PBO:0056136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper and CTNNBIP1 domain containing","termid":"PBO:0056136"}


id: GO:0050372
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: n ATP + calmodulin + n ubiquitin = n AMP + n diphosphate + ubiquitin(n)-calmodulin.","definition_xrefs":["MetaCyc:UBIQUITIN--CALMODULIN-LIGASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquitin-calmodulin ligase activity (obsolete GO:0050372)","synonyms":[{"name":"calmodulin:ubiquitin ligase (AMP-forming)","type":"related"},{"name":"uCaM-synthetase activity","type":"related"},{"name":"ubiquitin-calmodulin synthetase activity","type":"related"},{"name":"ubiquityl-calmodulin synthase activity","type":"related"},{"name":"ubiquityl-calmodulin synthetase activity","type":"related"}],"termid":"GO:0050372"}


id: SO:0000140
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence segment located within the five prime end of an mRNA that causes premature termination of translation.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation_regulatory_region","termid":"SO:0001680"},{"relation_name":"part_of","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attenuator","secondary_identifiers":["http://en.wikipedia.org/wiki/Attenuator"],"synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:attenuator","type":"exact"},{"name":"attenuator sequence","type":"exact"}],"termid":"SO:0000140"}


id: PBO:0075838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSTR5 antisense RNA 1","termid":"PBO:0075838"}


id: PBO:0058408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4777","termid":"PBO:0058408"}


id: MONDO:0033664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive multisystem disorder characterized by neurologic, gastrointestinal, and secretory dysfunction. Affected individuals present at birth with hypotonia, feeding difficulties, mild dysmorphic features, and sensorineural hearing loss. They show poor overall growth associated with gastrointestinal anomalies such as gastroesophageal reflux or midgut malrotation, as well as profound global developmental delay with inability to sit or speak. Tear, sweat, and saliva production is also impaired, causing dry mouth and recurrent bronchial mucus plugging. Some of the clinical features are reminiscent of cystic fibrosis.","definition_xrefs":["PMID:30740830","OMIM:619080","PMID:32754646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kilquist syndrome","secondary_identifiers":["MEDGEN:1742639","UMLS:C5436756"],"synonyms":[{"name":"KILQS","type":"exact"}],"termid":"MONDO:0033664","xrefs":{"Monarch":{"xref_id":"0033664"}}}


id: MONDO:0015838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cordiform uterus","secondary_identifiers":["MEDGEN:539891","Orphanet:180118","icd11.foundation:282476394","SCTID:14689000","UMLS:C0266397"],"synonyms":[{"name":"uterus arcuatus","type":"exact"},{"name":"uterus cordiformis","type":"exact"}],"termid":"MONDO:0015838","xrefs":{"Monarch":{"xref_id":"0015838"}}}


id: GO:0046596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the viral entry into the host cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by symbiont of entry into host","termid":"GO:0052372"},{"relation_name":"is_a","term_name":"regulation of viral life cycle","termid":"GO:1903900"},{"relation_name":"regulates","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of viral entry into host cell","synonyms":[{"name":"regulation of viral penetration into host cell","type":"exact"},{"name":"viral escort protein","type":"related"}],"termid":"GO:0046596"}


id: PBO:0072189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 6","termid":"PBO:0072189"}


id: PBO:0030952
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_centromere","termid":"PBO:0030952"}


id: GO:2000694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phragmoplast microtubule organization.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule cytoskeleton organization","termid":"GO:0070507"},{"relation_name":"regulates","term_name":"phragmoplast microtubule organization","termid":"GO:0080175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"regulation of phragmoplast microtubule organization","synonyms":[{"name":"regulation of phragmoplast microtubule cytoskeleton organization","type":"exact"},{"name":"regulation of phragmoplast microtubule organisation","type":"exact"}],"termid":"GO:2000694"}


id: GO:0140281
data:
  {"annotated_genes":["SJAG_03342","SJAG_04468","SJAG_01114","SJAG_03631","SJAG_01188","SJAG_01805","SJAG_04666","SJAG_00514","SJAG_03704","SJAG_05290"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79718,91740,94300,95688,107130,108342,109002,115356,117475,119904],"is_not":false,"summary":null,"term":"GO:0140281"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic division septum formation. Division septum formation is the assembly and arrangement of a septum that spans the plasma membrane interface between progeny cells following cytokinesis.","definition_xrefs":["PMID:22786806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of division septum assembly","termid":"GO:0010973"},{"relation_name":"is_a","term_name":"regulation of mitotic division septum assembly","termid":"GO:0140279"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cytokinetic process","termid":"GO:1903438"},{"relation_name":"positively_regulates","term_name":"mitotic division septum assembly","termid":"GO:0140278"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01805":null,"SJAG_03342":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_04468":null,"SJAG_04666":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"positively_regulates","termid":"GO:0000281"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0000281","GO:0007049","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of mitotic division septum assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of division septum formation involved in mitotic cell cycle","type":"exact"},{"name":"activation of formation of division septum involved in mitotic cell cycle","type":"exact"},{"name":"activation of mitotic division septum assembly","type":"exact"},{"name":"activation of septin assembly and septum biosynthesis involved in mitotic cell cycle","type":"exact"},{"name":"activation of septin assembly and septum formation involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of division septum formation involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of formation of division septum involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of septin assembly and septum biosynthesis involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of septin assembly and septum formation involved in mitotic cell cycle","type":"related"},{"name":"up regulation of division septum formation involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of formation of division septum involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of mitotic division septum assembly","type":"exact"},{"name":"up regulation of septin assembly and septum biosynthesis involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of septin assembly and septum formation involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of division septum formation involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of formation of division septum involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of mitotic division septum assembly","type":"exact"},{"name":"up-regulation of septin assembly and septum biosynthesis involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of septin assembly and septum formation involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of division septum formation involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of formation of division septum involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of septin assembly and septum biosynthesis involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of septin assembly and septum formation involved in mitotic cell cycle","type":"exact"}],"termid":"GO:0140281","terms_by_termid":{"GO:0140281":null}}


id: SO:0001176
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-base-paired sequence of nucleotide bases in tRNA. It contains several dihydrouracil residues.","definition_xrefs":["ISBN:071671920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_region","termid":"SO:0001172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHU_loop","synonyms":[{"name":"D loop","type":"related"},{"name":"DHU loop","type":"exact"}],"termid":"SO:0001176"}


id: MONDO:0017530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polysyndactyly 4","termid":"MONDO:0008272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"polysyndactyly, bilateral","secondary_identifiers":["Orphanet:295161","icd11.foundation:622710483"],"synonyms":[{"name":"preaxial polydactyly type 4, bilateral","type":"exact"}],"termid":"MONDO:0017530","xrefs":{"Monarch":{"xref_id":"0017530"}}}


id: PBO:0043621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMM domain containing 10","termid":"PBO:0043621"}


id: PBO:0012237
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterododecameric","termid":"PBO:0012237"}


id: PR:Q9P6R9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-splicing factor CWC22 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR18034:SF3","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13E7.01","secondary_identifiers":["UniProtKB:Q9P6R9"],"synonyms":[{"name":"SPBC13E7.01","type":"related"},{"name":"Spom972h-CWC22","type":"exact"},{"name":"complexed with cdc5 protein 22 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6R9"}


id: MONDO:0016820
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013542"}]},"cv_name":"mondo","definition":"Moyamoya disease (MMD) is a rare intracranial arteriopathy involving progressive stenosis of the cerebral vasculature located at the base of the brain causing transient ischemic attacks or strokes.","definition_xrefs":["Orphanet:2573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral arterial disease","termid":"MONDO:0006693"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"is_obsolete":false,"name":"Moyamoya disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:437.5","NANDO:1200183","OMIMPS:252350","GARD:7064","icd11.foundation:1746892088","MedDRA:10028047","NANDO:2100228","SCTID:89142007","MESH:D009072","UMLS:C0026654","MEDGEN:7726","NANDO:2200850","DOID:13099","NORD:1457","icd11.foundation:369231682","NCIT:C84895"],"synonyms":[{"name":"MYMY","type":"related"},{"name":"Moyamoya disease, primary","type":"related"},{"name":"Moyamoya disease, secondary","type":"related"},{"name":"idiopathic Moyamoya disease","type":"exact"},{"name":"progressive intracranial arterial occlusion","type":"exact"}],"termid":"MONDO:0016820","terms_by_termid":{"MONDO:0013542":null},"xrefs":{"Monarch":{"xref_id":"0016820"}}}


id: MONDO:1012942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lysosomal storage disease that occurs in dogs due to a mutation in the CNP gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, dog","termid":"MONDO:1010860"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal storage disease, CNP-related, dog","secondary_identifiers":["OMIA:002591-9615"],"termid":"MONDO:1012942","xrefs":{"Monarch":{"xref_id":"1012942"}}}


id: FYPO:0003227
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the long cytoplasmic microtubules characteristic of interphase cells remain present after mitosis begins and the mitotic spindle forms.","definition_xrefs":["PMID:18799626","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002399","FYPO:0000054","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"interphase microtubules present during mitosis","synonyms":[{"name":"interphase cytoplasmic microtubules present during mitosis","type":"exact"},{"name":"interphase microtubules present during M phase of mitotic cell cycle","type":"related"},{"name":"interphase microtubules present during mitosis during vegetative growth","type":"exact"},{"name":"interphase microtubules present during mitotic M phase","type":"related"},{"name":"interphase microtubules present during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0003227"}


id: FYECO:0000370
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 5-fluoroorotic acid (FOA) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ FOA","synonyms":[{"name":"+ 5-fluoroorotic acid","type":"exact"}],"termid":"FYECO:0000370"}


id: MONDO:0700183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Reticulum cell sarcoma that occurs in a cat.","definition_xrefs":["NCIT:C135008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma, non-human animal","termid":"MONDO:0700131"},{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"},{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"},{"relation_name":"is_a","term_name":"lymphoid system disorder, non-human animal","termid":"MONDO:1011330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline reticulum cell sarcoma","termid":"MONDO:0700183","xrefs":{"Monarch":{"xref_id":"0700183"}}}


id: PBO:0005643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MVB sorting pathway protein (predicted)","termid":"PBO:0005643"}


id: PBO:0062696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily B member 8 pseudogene","termid":"PBO:0062696"}


id: GO:0007146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"During meiosis, the aggregation, arrangement and bonding together of strand exchange proteins (recombinases) to form small, electron dense structures in association with meiotic chromosomes.","definition_xrefs":["GOC:jl","PMID:9334324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA recombinase assembly","termid":"GO:0000707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0065003","GO:0006281","GO:0044085","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"meiotic recombination nodule assembly","termid":"GO:0007146"}


id: GO:0061499
data:
  {"annotated_genes":["SJAG_01464","SJAG_01215","SJAG_02737","SJAG_04943","SJAG_01188"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109054,110822,118950],"is_not":false,"summary":null,"term":"GO:0061499"},{"annotations":[94722,117474],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0160065"}]},"cv_name":"cellular_component","definition":"One of three laminate structures that form the mitotic spindle pole body; the outer plaque is in the cytoplasm.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer plaque of spindle pole body","termid":"GO:0005824"},{"relation_name":"part_of","term_name":"mitotic spindle pole body","termid":"GO:0044732"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01188":null,"SJAG_01215":null,"SJAG_01464":null,"SJAG_02737":null,"SJAG_04943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005816"}],"interesting_parent_ids":["GO:0005816","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"outer plaque of mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061499","terms_by_termid":{"GO:0061499":null,"GO:0160065":null}}


id: GO:0046475
data:
  {"annotated_genes":["SJAG_03204","SJAG_00622","SJAG_02161","SJAG_02093","SJAG_04110","SJAG_02100","SJAG_02091"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73447,78192,79173,80339,99683],"is_not":false,"summary":null,"term":"GO:0046475"},{"annotations":[118988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034638"},{"annotations":[76110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006660"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycerophospholipids, any derivative of glycerophosphate that contains at least one O-acyl, O-alkyl, or O-alkenyl group attached to the glycerol residue.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"},{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"glycerolipid catabolic process","termid":"GO:0046503"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00622":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02100":null,"SJAG_02161":null,"SJAG_03204":null,"SJAG_04110":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"glycerophospholipid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6814848"],"synonyms":[{"name":"glycerophospholipid breakdown","type":"exact"},{"name":"glycerophospholipid catabolism","type":"exact"},{"name":"glycerophospholipid degradation","type":"exact"},{"name":"phosphoglyceride catabolic process","type":"exact"},{"name":"phosphoglyceride catabolism","type":"exact"}],"termid":"GO:0046475","terms_by_termid":{"GO:0006660":null,"GO:0034638":null,"GO:0046475":null}}


id: PBO:0062080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 11 pseudogene","termid":"PBO:0062080"}


id: MONDO:0009663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucus inspissation of respiratory tract","secondary_identifiers":["MESH:C565366","UMLS:C1854729","OMIM:253240","MEDGEN:340702"],"synonyms":[{"name":"mucus inspissation of respiratory tract","type":"exact"}],"termid":"MONDO:0009663","xrefs":{"Monarch":{"xref_id":"0009663"}}}


id: MONDO:0000518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chordoma (disease) that involves the fused sacrum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vertebral column disorder","termid":"MONDO:0000812"},{"relation_name":"is_a","term_name":"spinal chordoma","termid":"MONDO:0002894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sacrum chordoma","secondary_identifiers":["NCIT:C129927","UMLS:C3164279","DOID:0050900","MEDGEN:756688","SCTID:447730004"],"synonyms":[{"name":"chordoma (disease) of fused sacrum","type":"exact"},{"name":"fused sacrum chordoma (disease)","type":"exact"}],"termid":"MONDO:0000518","xrefs":{"Monarch":{"xref_id":"0000518"}}}


id: PBO:0056350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 7","termid":"PBO:0056350"}


id: PBO:0073260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 4","termid":"PBO:0073260"}


id: GO:0072468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A signal transduction process that contributes to a cell shape checkpoint.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transduction involved in cell shape checkpoint (obsolete GO:0072468)","termid":"GO:0072468"}


id: PBO:0068851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 89, pseudogene","termid":"PBO:0068851"}


id: PBO:0110076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome-associated protein","termid":"PBO:0110076"}


id: PBO:0058595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6727","termid":"PBO:0058595"}


id: GO:0008847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage to 3'-phosphomononucleotides and 3'-phosphooligonucleotides with 2',3'-cyclic phosphate intermediates.","definition_xrefs":["EC:4.6.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity","termid":"GO:0004521"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"Enterobacter ribonuclease activity","secondary_identifiers":["MetaCyc:3.1.27.6-RXN"],"synonyms":[{"name":"Enterobacter RNase activity","type":"exact"}],"termid":"GO:0008847"}


id: GO:0051150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of smooth muscle cell differentiation.","definition_xrefs":["CL:0000192","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle cell differentiation","termid":"GO:0051147"},{"relation_name":"regulates","term_name":"smooth muscle cell differentiation","termid":"GO:0051145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of smooth muscle cell differentiation","termid":"GO:0051150"}


id: SO:0002199
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pseudogene has no parent. It is the original gene, which is functional in some species but disrupted in some way (indels, mutation, recombination) in another species or strain.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_tRNA","termid":"SO:0000778"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unitary_pseudogenic_tRNA","synonyms":[{"name":"INSDC_feature:tRNA","type":"broad"},{"name":"INSDC_qualifier:unitary","type":"exact"},{"name":"unitary pseudogenic tRNA","type":"exact"}],"termid":"SO:0002199"}


id: PBO:0065392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 1","termid":"PBO:0065392"}


id: MONDO:0958030
data:
  {"annotated_genes":["SJAG_00912"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87857],"is_not":false,"summary":null,"term":"MONDO:0958030"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00912":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 118","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:301115","MEDGEN:1852539","UMLS:C5882665"],"termid":"MONDO:0958030","terms_by_termid":{"MONDO:0958030":null},"xrefs":{"Monarch":{"xref_id":"0958030"}}}


id: GO:1903614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of protein tyrosine phosphatase activity.","definition_xrefs":["PMID:11129957","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of protein tyrosine phosphatase activity (obsolete GO:1903614)","synonyms":[{"name":"down regulation of PPT-phosphatase activity","type":"exact"},{"name":"down regulation of PTP-phosphatase activity","type":"exact"},{"name":"down regulation of PTPase activity","type":"exact"},{"name":"down regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"down regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"down regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"down regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"down regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"down regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"down regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"down regulation of protein tyrosine phosphatase activity","type":"exact"},{"name":"down regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"down regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"down regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"down regulation of tyrosylprotein phosphatase activity","type":"exact"},{"name":"down-regulation of PPT-phosphatase activity","type":"exact"},{"name":"down-regulation of PTP-phosphatase activity","type":"exact"},{"name":"down-regulation of PTPase activity","type":"exact"},{"name":"down-regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"down-regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"down-regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"down-regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"down-regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"down-regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"down-regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"down-regulation of protein tyrosine phosphatase activity","type":"exact"},{"name":"down-regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"down-regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"down-regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"down-regulation of tyrosylprotein phosphatase activity","type":"exact"},{"name":"downregulation of PPT-phosphatase activity","type":"exact"},{"name":"downregulation of PTP-phosphatase activity","type":"exact"},{"name":"downregulation of PTPase activity","type":"exact"},{"name":"downregulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"downregulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"downregulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"downregulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"downregulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"downregulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"downregulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"downregulation of protein tyrosine phosphatase activity","type":"exact"},{"name":"downregulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"downregulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"downregulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"downregulation of tyrosylprotein phosphatase activity","type":"exact"},{"name":"inhibition of PPT-phosphatase activity","type":"narrow"},{"name":"inhibition of PTP-phosphatase activity","type":"narrow"},{"name":"inhibition of PTPase activity","type":"narrow"},{"name":"inhibition of [phosphotyrosine]protein phosphatase activity","type":"narrow"},{"name":"inhibition of phosphoprotein phosphatase (phosphotyrosine) activity","type":"narrow"},{"name":"inhibition of phosphotyrosine histone phosphatase activity","type":"narrow"},{"name":"inhibition of phosphotyrosine phosphatase activity","type":"narrow"},{"name":"inhibition of phosphotyrosine protein phosphatase activity","type":"narrow"},{"name":"inhibition of phosphotyrosylprotein phosphatase activity","type":"narrow"},{"name":"inhibition of protein phosphotyrosine phosphatase activity","type":"narrow"},{"name":"inhibition of protein tyrosine phosphatase activity","type":"narrow"},{"name":"inhibition of protein-tyrosine-phosphatase activity","type":"narrow"},{"name":"inhibition of protein-tyrosine-phosphate phosphohydrolase activity","type":"narrow"},{"name":"inhibition of tyrosine O-phosphate phosphatase activity","type":"narrow"},{"name":"inhibition of tyrosylprotein phosphatase activity","type":"narrow"},{"name":"negative regulation of PPT-phosphatase activity","type":"exact"},{"name":"negative regulation of PTP-phosphatase activity","type":"exact"},{"name":"negative regulation of PTPase activity","type":"exact"},{"name":"negative regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"negative regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"negative regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"negative regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"negative regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"negative regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"negative regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"negative regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"negative regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"negative regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"negative regulation of tyrosylprotein phosphatase activity","type":"exact"}],"termid":"GO:1903614"}


id: PBO:0081354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 177","termid":"PBO:0081354"}


id: PBO:0067984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 286","termid":"PBO:0067984"}


id: GO:1900656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of diorcinol biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of diorcinol biosynthetic process","termid":"GO:1900655"},{"relation_name":"negatively_regulates","term_name":"diorcinol biosynthetic process","termid":"GO:1900572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"negative regulation of diorcinol biosynthetic process","synonyms":[{"name":"down regulation of diorcinol anabolism","type":"exact"},{"name":"down regulation of diorcinol biosynthesis","type":"exact"},{"name":"down regulation of diorcinol biosynthetic process","type":"exact"},{"name":"down regulation of diorcinol formation","type":"exact"},{"name":"down regulation of diorcinol synthesis","type":"exact"},{"name":"down-regulation of diorcinol anabolism","type":"exact"},{"name":"down-regulation of diorcinol biosynthesis","type":"exact"},{"name":"down-regulation of diorcinol biosynthetic process","type":"exact"},{"name":"down-regulation of diorcinol formation","type":"exact"},{"name":"down-regulation of diorcinol synthesis","type":"exact"},{"name":"downregulation of diorcinol anabolism","type":"exact"},{"name":"downregulation of diorcinol biosynthesis","type":"exact"},{"name":"downregulation of diorcinol biosynthetic process","type":"exact"},{"name":"downregulation of diorcinol formation","type":"exact"},{"name":"downregulation of diorcinol synthesis","type":"exact"},{"name":"inhibition of diorcinol anabolism","type":"exact"},{"name":"inhibition of diorcinol biosynthesis","type":"exact"},{"name":"inhibition of diorcinol biosynthetic process","type":"narrow"},{"name":"inhibition of diorcinol formation","type":"exact"},{"name":"inhibition of diorcinol synthesis","type":"exact"},{"name":"negative regulation of diorcinol anabolism","type":"exact"},{"name":"negative regulation of diorcinol biosynthesis","type":"exact"},{"name":"negative regulation of diorcinol formation","type":"exact"},{"name":"negative regulation of diorcinol synthesis","type":"exact"}],"termid":"GO:1900656"}


id: PBO:0059851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 4","termid":"PBO:0059851"}


id: GO:0001404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Growth of a pathogenic organism that results in penetration into cells or tissues of the host organism. This often (but not necessarily) includes a filamentous growth form, and also can include secretion of proteases and lipases to break down host tissue.","definition_xrefs":["GOC:mcc","PMID:9728395"],"gene_count":0,"genotype_count":0,"name":"obsolete invasive growth (obsolete GO:0001404)","synonyms":[{"name":"invasive growth","type":"exact"},{"name":"tissue invasion","type":"exact"}],"termid":"GO:0001404"}


id: PBO:0085646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in meiotic progression; mutants are delayed in meiotic nuclear division and are defective in synaptonemal complex assembly; possible membrane-localized protein; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0085646"}


id: GO:0160081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of iodide through a transmembrane aqueous pore or channel.","definition_xrefs":["PMID:34910516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion channel activity","termid":"GO:0005253"},{"relation_name":"is_a","term_name":"iodide transmembrane transporter activity","termid":"GO:0015111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"iodide channel activity","secondary_identifiers":["Reactome:R-HSA-429767"],"termid":"GO:0160081"}


id: SO:0000128
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is silenced by DNA modification.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"silenced_by_DNA_modification","termid":"SO:0000894"},{"relation_name":"is_a","term_name":"silenced_gene","termid":"SO:0000127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_silenced_by_DNA_modification","synonyms":[{"name":"gene silenced by DNA modification","type":"exact"}],"termid":"SO:0000128"}


id: PBO:0065403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMA5 pseudogene 1","termid":"PBO:0065403"}


id: PBO:0005409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Cwf5","termid":"PBO:0005409"}


id: PBO:0070439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPH3AL antisense RNA 2","termid":"PBO:0070439"}


id: PBO:0048511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 15","termid":"PBO:0048511"}


id: GO:0023017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via a diffusible molecule.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via diffusible molecule (obsolete GO:0023017)","synonyms":[{"name":"signal transmission via diffusible molecule","type":"exact"},{"name":"signaling via diffusible mediator","type":"exact"}],"termid":"GO:0023017"}


id: GO:0046428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,4-dihydroxy-2-naphthoate + an all-trans-polyprenyl diphosphate + H+ = a 2-demethylmenaquinol + CO2 + diphosphate.","definition_xrefs":["RHEA:26478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016765"],"is_obsolete":false,"name":"1,4-dihydroxy-2-naphthoate polyprenyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11047","EC:2.5.1.74"],"synonyms":[{"name":"1,4-dihydroxy-2-naphtoate prenyltransferase activity","type":"exact"}],"termid":"GO:0046428"}


id: GO:1902427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of water channel activity.","definition_xrefs":["GOC:nhn","GOC:TermGenie","PMID:22095752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transporter activity","termid":"GO:0022898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of water channel activity","synonyms":[{"name":"regulation of aquaporin","type":"narrow"},{"name":"regulation of aquaporin permeability","type":"narrow"}],"termid":"GO:1902427"}


id: GO:0061126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP by the action of DIF-1. DIF-1 is a chlorinated alkylphenone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP by DIF-1","termid":"GO:0061120"},{"relation_name":"is_a","term_name":"positive regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of positive chemotaxis to cAMP by DIF-1","termid":"GO:0061126"}


id: PBO:0041311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 50","termid":"PBO:0041311"}


id: GO:0140207
data:
  {"annotated_genes":["SJAG_01660","SJAG_01983"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104947],"is_not":false,"summary":null,"term":"GO:0140207"},{"annotations":[97426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"}]},"cv_name":"biological_process","definition":"The directed movement of a tripeptide from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:22226946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tripeptide transmembrane transport","termid":"GO:0035443"},{"relation_name":"is_a","term_name":"oligopeptide import across plasma membrane","termid":"GO:0140205"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01660":null,"SJAG_01983":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"tripeptide import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140207","terms_by_termid":{"GO:0098709":null,"GO:0140207":null}}


id: PBO:0051313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-9 (pseudogene)","termid":"PBO:0051313"}


id: MONDO:0011042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Martinez-Frias syndrome","secondary_identifiers":["MEDGEN:318628","UMLS:C1832443","MESH:C563346","Orphanet:137862","OMIM:601346"],"synonyms":[{"name":"Martinez-Frias syndrome","type":"exact"},{"name":"Martínez-Frías syndrome","type":"related"},{"name":"pancreatic hypoplasia, intestinal atresia, and gallbladder aplasia or hypoplasia, with or without tracheoesophageal fistula","type":"related"}],"termid":"MONDO:0011042","xrefs":{"Monarch":{"xref_id":"0011042"}}}


id: GO:0086037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) + K+(out) = ADP + phosphate + Na+(out) + K+(in), that contributes to regulating the membrane potential of a cardiac muscle cell.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P-type sodium:potassium-exchanging transporter activity","termid":"GO:0005391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"P-type sodium:potassium-exchanging transporter activity involved in regulation of cardiac muscle cell membrane potential","termid":"GO:0086037"}


id: PBO:0049816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 8","termid":"PBO:0049816"}


id: MONDO:0020586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A coagulation disorder characterized by the partial or complete absence of factor V activity in the blood.","definition_xrefs":["NCIT:C131738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"factor V deficiency","secondary_identifiers":["MESH:D005166","SCTID:4320005","UMLS:C4317320","MEDGEN:1369551","NANDO:2200674"],"synonyms":[{"name":"factor V deficiency","type":"exact"}],"termid":"MONDO:0020586","xrefs":{"Monarch":{"xref_id":"0020586"}}}


id: MONDO:0013780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinitis pigmentosa that has material basis in variation in the chromosome region 6q23.","definition_xrefs":["DOID:0110385","PMID:22083234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 63","secondary_identifiers":["GARD:15810","ICD10CM:H35.5","OMIM:614494","UMLS:C3281002","MEDGEN:482632"],"synonyms":[{"name":"RP63","type":"exact"},{"name":"retinitis pigmentosa 63","type":"exact"},{"name":"retinitis pigmentosa type 63","type":"exact"}],"termid":"MONDO:0013780","xrefs":{"Monarch":{"xref_id":"0013780"}}}


id: PBO:0041014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family A member 1","termid":"PBO:0041014"}


id: PBO:0050393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A/B","termid":"PBO:0050393"}


id: PBO:0052076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1 pseudogene 1","termid":"PBO:0052076"}


id: MONDO:0024546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary hypertrophic osteoarthropathy in which the cause of the disease is a mutation in the HPGD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary hypertrophic osteoarthropathy","termid":"MONDO:0016620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic osteoarthropathy, primary, autosomal recessive, 1","secondary_identifiers":["OMIM:259100","UMLS:C4551679","GARD:15216","MEDGEN:1641972"],"synonyms":[{"name":"Cranioosteoarthropathy","type":"related"},{"name":"Currarino idiopathic osteoarthropathy","type":"related"},{"name":"HPGD primary hypertrophic osteoarthropathy","type":"exact"},{"name":"PDP, autosomal recessive","type":"related"},{"name":"PHOAR1","type":"related"},{"name":"Pho, autosomal recessive","type":"related"},{"name":"Touraine-Solente-Gole syndrome","type":"related"},{"name":"familial idiopathic osteoarthropathy of childhood","type":"related"},{"name":"hypertrophic osteoarthropathy, primary, autosomal recessive 1","type":"exact"},{"name":"hypertrophic osteoarthropathy, primary, autosomal recessive, 1","type":"exact"},{"name":"pachydermoperiostosis, autosomal recessive","type":"related"},{"name":"primary hypertrophic osteoarthropathy caused by mutation in HPGD","type":"exact"}],"termid":"MONDO:0024546","xrefs":{"Monarch":{"xref_id":"0024546"}}}


id: GO:0050086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannitol + NAD+ = D-fructose + NADH.","definition_xrefs":["MetaCyc:MANNITOL-2-DEHYDROGENASE-RXN","EC:1.1.1.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"mannitol 2-dehydrogenase activity","secondary_identifiers":["RHEA:12084"],"synonyms":[{"name":"D-mannitol dehydrogenase activity","type":"related"},{"name":"D-mannitol:NAD+ 2-oxidoreductase activity","type":"related"}],"termid":"GO:0050086"}


id: GO:0005929
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface and of some cytoplasmic parts. Each cilium is largely bounded by an extrusion of the cytoplasmic (plasma) membrane, and contains a regular longitudinal array of microtubules, anchored to a basal body.","definition_xrefs":["GOC:vw","PMID:20144998","GOC:cilia","GOC:kmv","ISBN:0198547684","PMID:17009929","GOC:curators","PMID:16824949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane-bounded organelle","termid":"GO:0043227"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cilium","secondary_identifiers":["GO:0072372","FMA:67181","NIF_Subcellular:sao787716553","Wikipedia:Cilium"],"synonyms":[{"name":"eukaryotic flagellum","type":"exact"},{"name":"flagellum","type":"related"},{"name":"microtubule-based flagellum","type":"exact"},{"name":"primary cilium","type":"narrow"}],"termid":"GO:0005929"}


id: MONDO:0975951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic paraplegia, mitochondrial","secondary_identifiers":["OMIM:500018"],"termid":"MONDO:0975951","xrefs":{"Monarch":{"xref_id":"0975951"}}}


id: GO:0051213
data:
  {"annotated_genes":["SJAG_00221","SJAG_04580","SJAG_03635","SJAG_02401","SJAG_00309","SJAG_04297","SJAG_03041","SJAG_05265","SJAG_00892","SJAG_03286","SJAG_03997","SJAG_03225","SJAG_03664","SJAG_00519","SJAG_00642"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76404,79372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016706"},{"annotations":[59102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010308"},{"annotations":[73148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010309"},{"annotations":[73977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097641"},{"annotations":[91704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102672"},{"annotations":[89244,72181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051864"},{"annotations":[68275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140680"},{"annotations":[76715,71878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"},{"annotations":[61241,95970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140683"},{"annotations":[68212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016702"},{"annotations":[96707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106156"},{"annotations":[75783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031543"},{"annotations":[105034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990984"}]},"cv_name":"molecular_function","definition":"Catalysis of the incorporation of both atoms of molecular oxygen (O2) into the substrate.","definition_xrefs":["PMID:1444267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00309":null,"SJAG_00519":null,"SJAG_00642":null,"SJAG_00892":null,"SJAG_02401":null,"SJAG_03041":null,"SJAG_03225":null,"SJAG_03286":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03997":null,"SJAG_04297":null,"SJAG_04580":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dioxygenase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-112125","Reactome:R-HSA-112124","Reactome:R-HSA-112121","Reactome:R-HSA-112120"],"termid":"GO:0051213","terms_by_termid":{"GO:0010308":null,"GO:0010309":null,"GO:0016702":null,"GO:0016706":null,"GO:0031543":null,"GO:0034647":null,"GO:0051864":null,"GO:0097641":null,"GO:0102672":null,"GO:0106156":null,"GO:0140680":null,"GO:0140683":null,"GO:1990984":null}}


id: MONDO:0018096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Weill-Marchesani syndrome (WMS) is a rare condition characterized by short stature, brachydactyly, joint stiffness, and characteristic eye abnormalities including microspherophakia, ectopia of the lens, severe myopia, and glaucoma.","definition_xrefs":["Orphanet:3449"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome with brachydactyly (obsolete MONDO:0019066)","termid":"MONDO:0019066"},{"relation_name":"excluded_subClassOf","term_name":"obsolete lens size anomaly (obsolete MONDO:0020235)","termid":"MONDO:0020235"},{"relation_name":"is_a","term_name":"autosomal genetic disease","termid":"MONDO:0000429"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"acromelic dysplasia","termid":"MONDO:0019695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Weill-Marchesani syndrome","secondary_identifiers":["MEDGEN:82705","DOID:0050475","NORD:1842","OMIMPS:277600","MedDRA:10064963","GARD:4936","ICD9:759.89","MESH:D056846","NCIT:C85226","UMLS:C0265313","SCTID:2884008"],"synonyms":[{"name":"Marchesani-Weill syndrome","type":"exact"},{"name":"WM syndrome","type":"related"},{"name":"WMS","type":"related"},{"name":"Weill Marchesani Syndrome","type":"exact"},{"name":"congenital mesodermal dystrophy","type":"exact"},{"name":"mesodermal Dysmorphodystrophy, congenital","type":"exact"},{"name":"mesodermal dysmorphodystrophy congenital","type":"related"},{"name":"spherophakia brachymorphia syndrome","type":"exact"},{"name":"spherophakia-brachymorphia syndrome","type":"exact"}],"termid":"MONDO:0018096","xrefs":{"Monarch":{"xref_id":"0018096"}}}


id: MONDO:1012673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant form of progressive retinal atrophy that occurs in dogs due to a mutation in the RHO gene.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"progressive retinal atrophy, dog","termid":"MONDO:1012226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant progressive retinal atrophy, RHO-related, dog","secondary_identifiers":["OMIA:001346-9615"],"synonyms":[{"name":"ADPRA","type":"exact"}],"termid":"MONDO:1012673","xrefs":{"Monarch":{"xref_id":"1012673"}}}


id: MONDO:0024418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular fibrosis multifocal obstructed vessels","secondary_identifiers":["Orphanet:2033","GARD:3857"],"termid":"MONDO:0024418","xrefs":{"Monarch":{"xref_id":"0024418"}}}


id: PBO:0043236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride voltage-gated channel 7","termid":"PBO:0043236"}


id: PBO:0080099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP4 small subunit processome component","termid":"PBO:0080099"}


id: PBO:0052206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNQ2 antisense RNA 1","termid":"PBO:0052206"}


id: MONDO:0010032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sjogren-Larsson-like ichthyosis without CNS or eye involvement","secondary_identifiers":["UMLS:C1849195","MEDGEN:336532","MESH:C536668","OMIM:270220"],"synonyms":[{"name":"Sjogren-Larsson-like ichthyosis without CNS or eye involvement","type":"exact"},{"name":"Sjogren-Larsson-like syndrome","type":"related"},{"name":"ichthyosis, Sjogren-Larsson-like, without CNS or eye involvement","type":"related"}],"termid":"MONDO:0010032","xrefs":{"Monarch":{"xref_id":"0010032"}}}


id: PBO:0063949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIN2 (TERF1) interacting telomerase inhibitor 1","termid":"PBO:0063949"}


id: PBO:0053506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 489","termid":"PBO:0053506"}


id: GO:0007181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a ligand-bound type II transforming growth factor beta (TGF-beta) receptor dimer with a type I TGF-beta receptor dimer, following ligand binding, to form a heterotetrameric TGF-beta receptor complex.","definition_xrefs":["Wikipedia:TGF_beta_signaling_pathway","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"transforming growth factor beta receptor signaling pathway","termid":"GO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"transforming growth factor beta receptor complex assembly","synonyms":[{"name":"TGF-beta receptor complex assembly","type":"exact"},{"name":"TGF-beta:type II receptor:type I receptor complex assembly","type":"exact"},{"name":"TGFbeta receptor complex assembly","type":"exact"}],"termid":"GO:0007181"}


id: GO:1900347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methane biosynthetic process from methanethiol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from methanethiol","termid":"GO:1900345"},{"relation_name":"is_a","term_name":"positive regulation of alkane biosynthetic process","termid":"GO:1901579"},{"relation_name":"is_a","term_name":"positive regulation of cellular respiration","termid":"GO:1901857"},{"relation_name":"positively_regulates","term_name":"methane biosynthetic process from methanethiol","termid":"GO:2001133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0006790"],"is_obsolete":false,"name":"positive regulation of methane biosynthetic process from methanethiol","synonyms":[{"name":"activation of methane biosynthetic process from methanethiol","type":"narrow"},{"name":"up regulation of methane biosynthetic process from methanethiol","type":"exact"},{"name":"up-regulation of methane biosynthetic process from methanethiol","type":"exact"},{"name":"upregulation of methane biosynthetic process from methanethiol","type":"exact"}],"termid":"GO:1900347"}


id: PBO:0077478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 200A","termid":"PBO:0077478"}


id: GO:1905152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of voltage-gated sodium channel activity.","definition_xrefs":["PMID:24198377","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of voltage-gated sodium channel activity","termid":"GO:1905150"},{"relation_name":"is_a","term_name":"positive regulation of sodium ion transmembrane transporter activity","termid":"GO:2000651"},{"relation_name":"is_a","term_name":"positive regulation of cation channel activity","termid":"GO:2001259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of voltage-gated sodium channel activity","synonyms":[{"name":"activation of voltage gated sodium channel activity","type":"narrow"},{"name":"activation of voltage-dependent sodium channel activity","type":"narrow"},{"name":"activation of voltage-gated sodium channel activity","type":"narrow"},{"name":"activation of voltage-gated sodium ion channel activity","type":"narrow"},{"name":"activation of voltage-sensitive sodium channel","type":"narrow"},{"name":"positive regulation of voltage gated sodium channel activity","type":"exact"},{"name":"positive regulation of voltage-dependent sodium channel activity","type":"exact"},{"name":"positive regulation of voltage-gated sodium ion channel activity","type":"exact"},{"name":"positive regulation of voltage-sensitive sodium channel","type":"exact"},{"name":"up regulation of voltage gated sodium channel activity","type":"exact"},{"name":"up regulation of voltage-dependent sodium channel activity","type":"exact"},{"name":"up regulation of voltage-gated sodium channel activity","type":"exact"},{"name":"up regulation of voltage-gated sodium ion channel activity","type":"exact"},{"name":"up regulation of voltage-sensitive sodium channel","type":"exact"},{"name":"up-regulation of voltage gated sodium channel activity","type":"exact"},{"name":"up-regulation of voltage-dependent sodium channel activity","type":"exact"},{"name":"up-regulation of voltage-gated sodium channel activity","type":"exact"},{"name":"up-regulation of voltage-gated sodium ion channel activity","type":"exact"},{"name":"up-regulation of voltage-sensitive sodium channel","type":"exact"},{"name":"upregulation of voltage gated sodium channel activity","type":"exact"},{"name":"upregulation of voltage-dependent sodium channel activity","type":"exact"},{"name":"upregulation of voltage-gated sodium channel activity","type":"exact"},{"name":"upregulation of voltage-gated sodium ion channel activity","type":"exact"},{"name":"upregulation of voltage-sensitive sodium channel","type":"exact"}],"termid":"GO:1905152"}


id: PBO:0078548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 39","termid":"PBO:0078548"}


id: PBO:0066604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member T1 pseudogene 3","termid":"PBO:0066604"}


id: PBO:0087405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Substrate receptor of the glucose-induced degradation-deficient (GID) complex that targets gluconeogenic enzymes for proteasomal degradation upon switch from ethanol to glucose as a carbon source; overexpression causes a cell cycle delay or arrest; null mutation results in a decrease in plasma membrane electron transport; protein abundance increases in response to DNA replication stress","termid":"PBO:0087405"}


id: PBO:0039889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 44","termid":"PBO:0039889"}


id: PBO:0083012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deadenylation-dependent mRNA-decapping factor; also required for faithful chromosome transmission, maintenance of rDNA locus stability, and protection of mRNA 3'-UTRs from trimming; associated with topoisomerase II; binds to mRNAs under glucose starvation, most often in the 3' UTR; functionally linked to Pab1p; forms cytoplasmic foci upon DNA replication stress; phosphorylation by PKA inhibits P body foci formation","termid":"PBO:0083012"}


id: GO:1904709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of granulosa cell apoptotic process.","definition_xrefs":["PMID:19208546","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell apoptotic process","termid":"GO:1904036"},{"relation_name":"is_a","term_name":"regulation of granulosa cell apoptotic process","termid":"GO:1904708"},{"relation_name":"negatively_regulates","term_name":"granulosa cell apoptotic process","termid":"GO:1904700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of granulosa cell apoptotic process","synonyms":[{"name":"down regulation of granulosa cell apoptosis","type":"narrow"},{"name":"down regulation of granulosa cell apoptotic process","type":"exact"},{"name":"down regulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"down regulation of granulosa cell of ovary apoptotic process","type":"exact"},{"name":"down-regulation of granulosa cell apoptosis","type":"narrow"},{"name":"down-regulation of granulosa cell apoptotic process","type":"exact"},{"name":"down-regulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"down-regulation of granulosa cell of ovary apoptotic process","type":"exact"},{"name":"downregulation of granulosa cell apoptosis","type":"narrow"},{"name":"downregulation of granulosa cell apoptotic process","type":"exact"},{"name":"downregulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"downregulation of granulosa cell of ovary apoptotic process","type":"exact"},{"name":"inhibition of granulosa cell apoptosis","type":"narrow"},{"name":"inhibition of granulosa cell apoptotic process","type":"narrow"},{"name":"inhibition of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"inhibition of granulosa cell of ovary apoptotic process","type":"narrow"},{"name":"negative regulation of granulosa cell apoptosis","type":"narrow"},{"name":"negative regulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"negative regulation of granulosa cell of ovary apoptotic process","type":"exact"}],"termid":"GO:1904709"}


id: FYPO:0005635
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the spindle begins later than normal during the first meiotic nuclear division.","definition_xrefs":["PMID:21920317","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to meiotic spindle","termid":"FYPO:0006454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of protein localization to spindle during meiosis I","synonyms":[{"name":"delayed onset of protein localisation to spindle during meiosis I","type":"exact"},{"name":"delayed onset of protein localization to meiosis I spindle","type":"exact"},{"name":"delayed onset of protein localization to meiotic spindle during meiosis I","type":"exact"},{"name":"delayed onset of protein localization to spindle during first meiotic nuclear division","type":"exact"},{"name":"delayed protein localization to spindle during meiosis I","type":"exact"}],"termid":"FYPO:0005635"}


id: GO:0035271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the ring gland over time, from its formation to a mature structure. The ring gland is a neuroendocrine organ found in higher Dipterans, which is composed of the prothoracic gland, the corpus allatum, and the corpora cardiacum. The ring gland is the site of production and release of ecdysteroids and juvenile hormones.","definition_xrefs":["GOC:bf","PMID:11223816","PMID:9584098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"endocrine system development","termid":"GO:0035270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ring gland development","termid":"GO:0035271"}


id: PBO:0091885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene malic enzyme","termid":"PBO:0091885"}


id: PBO:0065064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteoglycan 2, pro eosinophil major basic protein","termid":"PBO:0065064"}


id: GO:0018967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving tetrachloroethylene (tetrachloroethene), a derivative of ethene with the hydrogen atoms replaced by chlorines. Tetrachloroethene has been used primarily as a solvent in dry-cleaning industries and to a lesser extent as a degreasing solvent.","gene_count":0,"genotype_count":0,"name":"obsolete tetrachloroethylene metabolic process (obsolete GO:0018967)","synonyms":[{"name":"tetrachloroethene metabolic process","type":"exact"},{"name":"tetrachloroethene metabolism","type":"exact"},{"name":"tetrachloroethylene metabolism","type":"exact"}],"termid":"GO:0018967"}


id: PBO:0078589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 2, Y-linked","termid":"PBO:0078589"}


id: GO:0016596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to thienylcyclohexylpiperidine.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"thienylcyclohexylpiperidine binding","synonyms":[{"name":"TCP binding","type":"broad"}],"termid":"GO:0016596"}


id: PR:O13951
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- iwr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II nuclear localization protein iwr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.08","synonyms":[{"name":"Spom972h-iwr1","type":"exact"}],"termid":"PR:O13951"}


id: PBO:0000574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG repeat","termid":"PBO:0000574"}


id: GO:1901683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an arsenate ion from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"arsenate ion transmembrane transporter activity","termid":"GO:1901683"}


id: PBO:0052411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and short cytoplasmic tail 5","termid":"PBO:0052411"}


id: PBO:0079887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 3B pseudogene 1","termid":"PBO:0079887"}


id: PBO:0054387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1783","termid":"PBO:0054387"}


id: MONDO:1012134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin G2 deficiency, non-human animal","termid":"MONDO:1011728"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin G2 deficiency, cattle","secondary_identifiers":["OMIA:000555-9913"],"termid":"MONDO:1012134","xrefs":{"Monarch":{"xref_id":"1012134"}}}


id: FYPO:0001105
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which catalase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal catalase activity","termid":"FYPO:0001104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000002","FYPO:0000661","FYPO:0005447"],"is_obsolete":false,"name":"abolished catalase activity","synonyms":[{"name":"catalase activity abolished","type":"exact"}],"termid":"FYPO:0001105"}


id: PR:O14154
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mde5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase mde5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25H1.09","synonyms":[{"name":"1,4-alpha-D-glucan glucanohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mde5","type":"exact"},{"name":"mei4-dependent protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotic expression up-regulated protein 30 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14154"}


id: PBO:0090843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase histone chaperone","termid":"PBO:0090843"}


id: MOD:00397
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with iodoacetamide, usually replacement of a reactive hydrogen with a methylcarboxamido group.","definition_xrefs":["PubMed:11510821","PubMed:11327326","PubMed:12422359","Unimod:4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodoacetamide derivatized residue","synonyms":[{"name":"Carbamidomethyl","type":"related"},{"name":"Iodoacetamide derivative","type":"related"}],"termid":"MOD:00397"}


id: GO:0070702
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner of two mucus layers secreted by epithelial cells in the colon; the inner mucus layer is firmly attached to the epithelium, is densely packed with a compact stratified appearance and is devoid of bacteria.","definition_xrefs":["GOC:mm2","PMID:19432394","PMID:18806221","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucus layer","termid":"GO:0070701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"inner mucus layer","termid":"GO:0070702"}


id: PBO:0065788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase catalytic subunit 1 pseudogene 1","termid":"PBO:0065788"}


id: FYPO:0000539
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein secretion is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein secretion during vegetative growth","termid":"FYPO:0000536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"increased protein secretion during vegetative growth","synonyms":[{"name":"increased protein secretion during mitotic cell cycle","type":"related"},{"name":"protein secretion: increased","type":"related"}],"termid":"FYPO:0000539"}


id: PBO:0027310
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_5'_deoxyribonuclease_(pyrimidine_dimer)_activity","termid":"PBO:0027310"}


id: PBO:0050019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DO beta","termid":"PBO:0050019"}


id: GO:0009703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitrite + NAD+ + H2O = nitrate + NADH + H+.","definition_xrefs":["RHEA:17913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate reductase [NAD(P)H] activity","termid":"GO:0050463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nitrate reductase (NADH) activity","secondary_identifiers":["EC:1.7.1.1","MetaCyc:NITRATE-REDUCTASE-NADH-RXN"],"synonyms":[{"name":"NADH-dependent nitrate reductase activity","type":"related"},{"name":"NADH-nitrate reductase activity","type":"related"},{"name":"NADH:nitrate oxidoreductase activity","type":"related"},{"name":"NADH:nitrate reductase activity","type":"exact"},{"name":"assimilatory NADH: nitrate reductase activity","type":"related"},{"name":"assimilatory NADH:nitrate reductase activity","type":"related"},{"name":"assimilatory nitrate reductase activity","type":"broad"},{"name":"nitrate reductase (NADH(2)) activity","type":"related"},{"name":"nitrate reductase (NADH2)","type":"related"},{"name":"nitrite:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0009703"}


id: FYPO:0005261
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is increased relative to normal in a medium containing galactose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0002057","FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased cell population growth on galactose carbon source","synonyms":[{"name":"increased growth on galactose carbon source","type":"broad"},{"name":"increased vegetative cell growth on galactose carbon source","type":"exact"}],"termid":"FYPO:0005261"}


id: MONDO:0004811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic conjunctivitis","termid":"MONDO:0002314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"simple chronic conjunctivitis","secondary_identifiers":["UMLS:C0155146","ICD9:372.11","DOID:9512","MEDGEN:509807","SCTID:8211008"],"termid":"MONDO:0004811","xrefs":{"Monarch":{"xref_id":"0004811"}}}


id: PBO:0000307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gyp7 (predicted)","termid":"PBO:0000307"}


id: MONDO:0008808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aplasia cutis congenita - intestinal lymphangiectasia is an extremely rare association syndrome, described in only two brothers to date (one of which died at 2 months of age), characterized by aplasia cutis congenita of the vertex and generalized edema (as well as hypoproteinemia and lymphopenia) due to intestinal lymphangiectasia. There have been no further descriptions in the literature since 1985.","definition_xrefs":["Orphanet:1116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"primary lymphedema","termid":"MONDO:0019175"},{"relation_name":"is_a","term_name":"mixed dermis disorder","termid":"MONDO:0019294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"aplasia cutis congenita-intestinal lymphangiectasia syndrome","secondary_identifiers":["MEDGEN:349241","OMIM:207731","MESH:C537788","SCTID:720500008","UMLS:C1859753","GARD:753"],"synonyms":[{"name":"ACC with intestinal lymphangiectasia","type":"related"},{"name":"Bronspiegel-Zelnick syndrome","type":"exact"},{"name":"aplasia cutis congenita intestinal lymphangiectasia","type":"related"},{"name":"aplasia cutis congenita with intestinal lymphangiectasia","type":"related"},{"name":"autosomal recessive aplasia cutis","type":"exact"}],"termid":"MONDO:0008808","xrefs":{"Monarch":{"xref_id":"0008808"}}}


id: MONDO:0007078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of pseudohypoparathyroidism (PHP) characterized by renal resistance to parathyroid hormone (PTH), resulting in hypocalcemia, hyperphosphatemia, and elevated PTH; resistance to other hormones including thydroid stimulating hormone (TSH), gonadotropins and growth-hormone-releasing hormone (GHRH); and a constellation of clinical features known as Albright hereditary osteodystrophy (AHO).","definition_xrefs":["Orphanet:79443"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"dermis disorder","termid":"MONDO:0021154"},{"relation_name":"is_a","term_name":"acromelic dysplasia","termid":"MONDO:0019695"},{"relation_name":"is_a","term_name":"pseudohypoparathyroidism","termid":"MONDO:0019992"},{"relation_name":"is_a","term_name":"disorder of GNAS inactivation","termid":"MONDO:0800466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"pseudohypoparathyroidism type 1A","secondary_identifiers":["DOID:0080053","MEDGEN:488447","UMLS:C3494506","SCTID:58833000","icd11.foundation:1513156369","NCIT:C129721","MESH:C537045","NANDO:1201075","ICD9:275.49","GARD:7486","OMIM:103580"],"synonyms":[{"name":"AHO","type":"related"},{"name":"AHO-PHP syndrome Ia","type":"exact"},{"name":"Albright hereditary osteodystrophy","type":"exact"},{"name":"Albright hereditary osteodystrophy with multiple hormone resistance","type":"exact"},{"name":"Albright hereditary osteodystrophy-PHP syndrome Ia","type":"exact"},{"name":"Albright's hereditary osteodystrophy","type":"exact"},{"name":"PHP 1A","type":"related"},{"name":"PHP1A","type":"exact"},{"name":"Pseudohypoparathyroidism Ia","type":"exact"},{"name":"Pseudohypoparathyroidism type 1A","type":"exact"},{"name":"Pseudohypoparathyroidism, type 1A","type":"related"},{"name":"Pseudohypoparathyroidism, type IA","type":"related"}],"termid":"MONDO:0007078","xrefs":{"Monarch":{"xref_id":"0007078"}}}


id: PBO:0078189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 4-2","termid":"PBO:0078189"}


id: MONDO:1010822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Split hand that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"split hand, non-human animal","termid":"MONDO:1010159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"split hand, domestic cat","secondary_identifiers":["OMIA:000942-9685"],"termid":"MONDO:1010822","xrefs":{"Monarch":{"xref_id":"1010822"}}}


id: MONDO:0000996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare non-Hodgkin or Hodgkin lymphoma that arises from the prostate gland.","definition_xrefs":["NCIT:C5533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"prostate cancer","termid":"MONDO:0008315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"prostate lymphoma","secondary_identifiers":["DOID:10290","MEDGEN:235500","UMLS:C1335512"],"synonyms":[{"name":"lymphoma of prostate","type":"exact"},{"name":"lymphoma of prostate gland","type":"exact"},{"name":"lymphoma of the prostate","type":"exact"},{"name":"primary prostate lymphoma","type":"exact"},{"name":"prostate gland lymphoma","type":"exact"},{"name":"prostate lymphoma","type":"exact"}],"termid":"MONDO:0000996","xrefs":{"Monarch":{"xref_id":"0000996"}}}


id: GO:1900887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pentadecane biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pentadecane metabolic process","termid":"GO:1900890"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"pentadecane biosynthetic process","termid":"GO:1900634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pentadecane biosynthetic process","synonyms":[{"name":"regulation of pentadecane anabolism","type":"exact"},{"name":"regulation of pentadecane biosynthesis","type":"exact"},{"name":"regulation of pentadecane formation","type":"exact"},{"name":"regulation of pentadecane synthesis","type":"exact"}],"termid":"GO:1900887"}


id: PBO:0054149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1516","termid":"PBO:0054149"}


id: PBO:0036330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin Pfl2","termid":"PBO:0036330"}


id: MONDO:0010629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"impacted teeth, multiple","secondary_identifiers":["UMLS:C1839965","OMIM:308280","MEDGEN:327004"],"synonyms":[{"name":"impacted teeth, multiple","type":"exact"}],"termid":"MONDO:0010629","xrefs":{"Monarch":{"xref_id":"0010629"}}}


id: PBO:0064672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 7","termid":"PBO:0064672"}


id: GO:0002348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process leading to positive selection of B cells in the bone marrow. Positive selection is the process in which B or T cells are selected to survive based on signaling through their antigen receptors.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central B cell selection","termid":"GO:0002340"},{"relation_name":"is_a","term_name":"B cell positive selection","termid":"GO:0002346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central B cell positive selection","synonyms":[{"name":"central B lymphocyte positive selection","type":"exact"},{"name":"central B-cell positive selection","type":"exact"},{"name":"central B-lymphocyte positive selection","type":"exact"}],"termid":"GO:0002348"}


id: MONDO:0016214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pulmonary fibrosis - hepatic hyperplasia - bone marrow hypoplasia, also named Btrimorphic syndromeB (i.e. three (inherited) morbidities, pulmonary, hepatic and cytopenia), is a rare disease reported in 4 cases to date, manifesting with idiopathic pulmonary fibrosis, hepatic nodular regenerative hyperplasia leading to portal hypertension and thrombocytopenia due to bone marrow hypoplasia. The condition was associated with 100% mortality.","definition_xrefs":["Orphanet:210136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease","termid":"MONDO:0015925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary fibrosis-hepatic hyperplasia-bone marrow hypoplasia syndrome","secondary_identifiers":["GARD:20449","MEDGEN:1385709","UMLS:C4510085"],"termid":"MONDO:0016214","xrefs":{"Monarch":{"xref_id":"0016214"}}}


id: SO:0000781
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Attribute describing sequence that has been integrated with foreign sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgenic","termid":"SO:0000781"}


id: MONDO:0700254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paraneoplastic syndrome that involves the digestive system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraneoplastic syndrome","termid":"MONDO:0021073"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraneoplastic gastrointestinal syndrome","termid":"MONDO:0700254","xrefs":{"Monarch":{"xref_id":"0700254"}}}


id: GO:0006719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of juvenile hormones, the three sesquiterpenoid derivatives that function to maintain the larval state of insects at molting and that may be required for other processes, e.g. oogenesis.","definition_xrefs":["GOC:go_curators","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile hormone metabolic process","termid":"GO:0006716"},{"relation_name":"is_a","term_name":"sesquiterpenoid catabolic process","termid":"GO:0016107"},{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"juvenile hormone catabolic process","synonyms":[{"name":"juvenile hormone breakdown","type":"exact"},{"name":"juvenile hormone catabolism","type":"exact"},{"name":"juvenile hormone degradation","type":"exact"}],"termid":"GO:0006719"}


id: PBO:0030828
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phosphoribosylformylglycinamidine_cyclo-ligase_activity","termid":"PBO:0030828"}


id: PR:O59856
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl33 gene.","definition_xrefs":["UniProtKB:O59856","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L33, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.08c","synonyms":[{"name":"Spom972h-mrpl33","type":"exact"}],"termid":"PR:O59856"}


id: PBO:0061531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase","termid":"PBO:0061531"}


id: MONDO:0002874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor that arises from the testis and is characterized by the presence of one histologic component. This category includes seminoma, teratoma, embryonal carcinoma, yolk sac tumor, and trophoblastic tumor.","definition_xrefs":["NCIT:C39915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular germ cell tumor","termid":"MONDO:0010108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular pure germ cell tumor","secondary_identifiers":["MEDGEN:308089","DOID:4087","UMLS:C1514608"],"synonyms":[{"name":"testicular Pure germ cell tumor","type":"exact"},{"name":"testicular Pure germ cell tumour","type":"exact"}],"termid":"MONDO:0002874","xrefs":{"Monarch":{"xref_id":"0002874"}}}


id: PBO:0051507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of nuclear factor kappa B kinase subunit epsilon","termid":"PBO:0051507"}


id: PBO:0062576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily D member 5 pseudogene","termid":"PBO:0062576"}


id: GO:0030114
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A slime layer is an easily removed, diffuse, unorganized layer of extracellular material that surrounds a cell. Specifically this consists mostly of exopolysaccharides, glycoproteins, and glycolipids.","definition_xrefs":["GOC:mlg","Wikipedia:Slime_layer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycocalyx","termid":"GO:0030112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"slime layer","termid":"GO:0030114"}


id: PBO:0071226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 67","termid":"PBO:0071226"}


id: PBO:0063850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein inhibitor of activated STAT 3","termid":"PBO:0063850"}


id: GO:1900904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hexadecanal biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of hexadecanal biosynthetic process","termid":"GO:1900902"},{"relation_name":"is_a","term_name":"positive regulation of hexadecanal metabolic process","termid":"GO:1900907"},{"relation_name":"positively_regulates","term_name":"hexadecanal biosynthetic process","termid":"GO:0006634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hexadecanal biosynthetic process","synonyms":[{"name":"activation of hexadecanal anabolism","type":"narrow"},{"name":"activation of hexadecanal biosynthesis","type":"narrow"},{"name":"activation of hexadecanal biosynthetic process","type":"narrow"},{"name":"activation of hexadecanal formation","type":"narrow"},{"name":"activation of hexadecanal synthesis","type":"narrow"},{"name":"activation of palmitaldehyde biosynthesis","type":"narrow"},{"name":"activation of palmitaldehyde biosynthetic process","type":"related"},{"name":"positive regulation of hexadecanal anabolism","type":"related"},{"name":"positive regulation of hexadecanal biosynthesis","type":"related"},{"name":"positive regulation of hexadecanal formation","type":"related"},{"name":"positive regulation of hexadecanal synthesis","type":"related"},{"name":"positive regulation of palmitaldehyde biosynthesis","type":"related"},{"name":"positive regulation of palmitaldehyde biosynthetic process","type":"related"},{"name":"up regulation of hexadecanal anabolism","type":"related"},{"name":"up regulation of hexadecanal biosynthesis","type":"related"},{"name":"up regulation of hexadecanal biosynthetic process","type":"exact"},{"name":"up regulation of hexadecanal formation","type":"related"},{"name":"up regulation of hexadecanal synthesis","type":"related"},{"name":"up regulation of palmitaldehyde biosynthesis","type":"related"},{"name":"up regulation of palmitaldehyde biosynthetic process","type":"related"},{"name":"up-regulation of hexadecanal anabolism","type":"related"},{"name":"up-regulation of hexadecanal biosynthesis","type":"related"},{"name":"up-regulation of hexadecanal biosynthetic process","type":"exact"},{"name":"up-regulation of hexadecanal formation","type":"related"},{"name":"up-regulation of hexadecanal synthesis","type":"related"},{"name":"up-regulation of palmitaldehyde biosynthesis","type":"related"},{"name":"up-regulation of palmitaldehyde biosynthetic process","type":"related"},{"name":"upregulation of hexadecanal anabolism","type":"related"},{"name":"upregulation of hexadecanal biosynthesis","type":"related"},{"name":"upregulation of hexadecanal biosynthetic process","type":"exact"},{"name":"upregulation of hexadecanal formation","type":"related"},{"name":"upregulation of hexadecanal synthesis","type":"related"},{"name":"upregulation of palmitaldehyde biosynthesis","type":"related"},{"name":"upregulation of palmitaldehyde biosynthetic process","type":"related"}],"termid":"GO:1900904"}


id: PBO:0078162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 39","termid":"PBO:0078162"}


id: GO:0005533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete N-acetylgalactosamine lectin (obsolete GO:0005533)","synonyms":[{"name":"N-acetylgalactosamine lectin","type":"exact"}],"termid":"GO:0005533"}


id: PBO:0068752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5E small nuclear 7, pseudogene","termid":"PBO:0068752"}


id: GO:0048708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an astrocyte. An astrocyte is the most abundant type of glial cell. Astrocytes provide support for neurons and regulate the environment in which they function.","definition_xrefs":["GOC:vp","PMID:15139015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"astrocyte differentiation","termid":"GO:0048708"}


id: PATO:0001831
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A female fertility which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"female fertile","termid":"PATO:0000888"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased female fertility","synonyms":[{"name":"high female fertility","type":"exact"}],"termid":"PATO:0001831"}


id: PBO:0052511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 25","termid":"PBO:0052511"}


id: RO:0002356
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"The relationship linking a cell and its participation in a process that results in the fate of the cell being specified. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment. ","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_specification_of","termid":"RO:0002356"}


id: PBO:0090031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Pop8","termid":"PBO:0090031"}


id: MONDO:0011328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant limb-girdle muscular dystrophy type 1E (obsolete MONDO:0011328)","termid":"MONDO:0011328","xrefs":{"Monarch":{"xref_id":"0011328"}}}


id: GO:0061555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of a ganglion. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"ganglion morphogenesis","termid":"GO:0061552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ganglion structural organization","synonyms":[{"name":"ganglia structural organization","type":"related"}],"termid":"GO:0061555"}


id: PBO:0006203
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-gene_product","termid":"PBO:0006203"}


id: PBO:0029409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_frequency_of_conjugation_with_h+_cells","termid":"PBO:0029409"}


id: GO:0000489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of SSU-rRNA","termid":"GO:0030490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0042254","GO:0044085"],"is_obsolete":false,"name":"maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)","termid":"GO:0000489"}


id: PBO:0042011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 68","termid":"PBO:0042011"}


id: MONDO:0020315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Unclassified myelodysplastic syndrome (MDS-U) is a subtype of myelodysplastic syndrome (MDS) with atypical features of uncertain clinical significance.","definition_xrefs":["Orphanet:98827"],"gene_count":0,"genotype_count":0,"name":"obsolete unclassified myelodysplastic syndrome (obsolete MONDO:0020315)","secondary_identifiers":["icd11.foundation:1684468291"],"termid":"MONDO:0020315","xrefs":{"Monarch":{"xref_id":"0020315"}}}


id: PBO:0045400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 2","termid":"PBO:0045400"}


id: PBO:0066359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REST corepressor 3","termid":"PBO:0066359"}


id: GO:0032803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of low-density lipoprotein particle receptors.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein catabolic process","termid":"GO:0042176"},{"relation_name":"is_a","term_name":"regulation of receptor catabolic process","termid":"GO:2000644"},{"relation_name":"regulates","term_name":"low-density lipoprotein particle receptor catabolic process","termid":"GO:0032802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"regulation of low-density lipoprotein particle receptor catabolic process","synonyms":[{"name":"regulation of LDLr catabolic process","type":"exact"},{"name":"regulation of LDLr catabolism","type":"exact"},{"name":"regulation of low-density lipoprotein receptor breakdown","type":"exact"},{"name":"regulation of low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"regulation of low-density lipoprotein receptor catabolism","type":"exact"},{"name":"regulation of low-density lipoprotein receptor degradation","type":"exact"}],"termid":"GO:0032803"}


id: GO:0075091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of the symbiont signal transduction mediated by G-protein alpha subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont signal transduction mediated by G-protein alpha subunit (obsolete GO:0075091)","termid":"GO:0075091"}


id: GO:0002795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antimicrobial peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antimicrobial peptide production","termid":"GO:0002785"},{"relation_name":"is_a","term_name":"negative regulation of peptide secretion","termid":"GO:0002792"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide secretion","termid":"GO:0002794"},{"relation_name":"negatively_regulates","term_name":"antimicrobial peptide secretion","termid":"GO:0002776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006810","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of antimicrobial peptide secretion","synonyms":[{"name":"down regulation of antimicrobial peptide secretion","type":"exact"},{"name":"down-regulation of antimicrobial peptide secretion","type":"exact"},{"name":"downregulation of antimicrobial peptide secretion","type":"exact"},{"name":"inhibition of antimicrobial peptide secretion","type":"narrow"}],"termid":"GO:0002795"}


id: PBO:0076007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STIMATE-MUSTN1 readthrough","termid":"PBO:0076007"}


id: GO:0062198
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A region of heterochromatin associated with sites in rDNA repeats where replication forks pause.","definition_xrefs":["PMID:25417108"],"gene_count":0,"genotype_count":0,"name":"obsolete rDNA replication pause site heterochromatin (obsolete GO:0062198)","termid":"GO:0062198"}


id: GO:0005351
data:
  {"annotated_genes":["SJAG_02958","SJAG_03606","SJAG_03820","SJAG_03608","SJAG_04068","SJAG_03960","SJAG_04905","SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72640,74840,74945,74956,76559,78045],"is_not":false,"summary":null,"term":"GO:0005351"},{"annotations":[119223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"},{"annotations":[97669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[77429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: carbohydrate(out) + H+(out) = carbohydrate(in) + H+(in).","definition_xrefs":["TC:2.A.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:monoatomic cation symporter activity","termid":"GO:0005402"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_02958":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03960":null,"SJAG_04068":null,"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"carbohydrate:proton symporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0005403","GO:0015542"],"synonyms":[{"name":"cation/sugar symporter activity","type":"narrow"},{"name":"hydrogen:sugar symporter activity","type":"narrow"},{"name":"hydrogen:sugar transporter activity","type":"broad"},{"name":"lactose/glucose efflux transporter activity","type":"narrow"},{"name":"proton:sugar symporter activity","type":"exact"},{"name":"sugar efflux transmembrane transporter activity","type":"narrow"},{"name":"sugar porter activity","type":"narrow"},{"name":"sugar transporter","type":"broad"},{"name":"sugar:hydrogen ion symporter activity","type":"narrow"},{"name":"sugar:hydrogen symporter activity","type":"exact"},{"name":"sugar:proton symporter activity","type":"narrow"}],"termid":"GO:0005351","terms_by_termid":{"GO:0005351":null,"GO:0005358":null,"GO:0005364":null,"GO:0008506":null}}


id: SO:0000046
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"To insert a subsection of sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000046 insert (obsolete SO:0000046)","termid":"SO:0000046"}


id: PBO:0000079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 family protein 2","termid":"PBO:0000079"}


id: PBO:0071568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 34","termid":"PBO:0071568"}


id: PBO:0053298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM zinc finger domain containing 4","termid":"PBO:0053298"}


id: PBO:0031408
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pear-shaped_cell","termid":"PBO:0031408"}


id: PBO:0004654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mde2 protein","termid":"PBO:0004654"}


id: GO:1901703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein localization that is involved in auxin polar transport.","definition_xrefs":["GOC:TermGenie","PMID:23163883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"auxin polar transport","termid":"GO:0009926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"protein localization involved in auxin polar transport","synonyms":[{"name":"establishment and maintenance of protein localization involved in auxin polar transport","type":"exact"},{"name":"protein localisation involved in auxin polar transport","type":"exact"}],"termid":"GO:1901703"}


id: GO:1904618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of actin binding.","definition_xrefs":["GOC:mr","PMID:8621557","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of actin binding (obsolete GO:1904618)","synonyms":[{"name":"activation of actin binding","type":"narrow"},{"name":"activation of membrane associated actin binding","type":"narrow"},{"name":"positive regulation of membrane associated actin binding","type":"narrow"},{"name":"up regulation of actin binding","type":"exact"},{"name":"up regulation of membrane associated actin binding","type":"narrow"},{"name":"up-regulation of actin binding","type":"exact"},{"name":"up-regulation of membrane associated actin binding","type":"narrow"},{"name":"upregulation of actin binding","type":"exact"},{"name":"upregulation of membrane associated actin binding","type":"narrow"}],"termid":"GO:1904618"}


id: PBO:0066328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of calcineurin 2","termid":"PBO:0066328"}


id: PBO:0111380
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific, implicated in rRNA processing","termid":"PBO:0111380"}


id: PBO:0004868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp42 (predicted)","termid":"PBO:0004868"}


id: PR:Q9Y7J6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk21 gene.","definition_xrefs":["UniProtKB:Q9Y7J6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.10c","synonyms":[{"name":"Spom972h-ppk21","type":"exact"}],"termid":"PR:Q9Y7J6"}


id: SO:0002164
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 5th residue (a lysine), from the start of the H2B histone protein is acetylated.","definition_xrefs":["PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2B_acetylation_site","termid":"SO:0002143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2BK5_acetylation_site","synonyms":[{"name":"H2BK5 acetylation site","type":"exact"},{"name":"H2BK5ac","type":"exact"}],"termid":"SO:0002164"}


id: PBO:0111873
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nedd4/Rsp5 family","termid":"PBO:0111873"}


id: PBO:0080814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 6 pseudogene 4","termid":"PBO:0080814"}


id: PBO:0070459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L4 pseudogene 2","termid":"PBO:0070459"}


id: SO:0000074
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a gene when the five prime region overlaps with another gene's five prime region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlapping","termid":"SO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_five_prime_overlap","synonyms":[{"name":"five prime-five prime overlap","type":"exact"}],"termid":"SO:0000074"}


id: GO:0051749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole acetic acid + S-adenosyl-methionine = methyl indole acetic acid ester + S-adenosyl-homocysteine.","definition_xrefs":["PMID:16169896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"indole acetic acid carboxyl methyltransferase activity","synonyms":[{"name":"IAA carboxyl methyltransferase activity","type":"exact"}],"termid":"GO:0051749"}


id: PBO:0051854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 1","termid":"PBO:0051854"}


id: PBO:0084837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal component of the small subunit","termid":"PBO:0084837"}


id: FYPO:0006386
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that normally localizes to a compact region at the tip of a shmoo, or mating projection, is more dispersed than normal.","definition_xrefs":["PomBase:mah","PMID:19627505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip","termid":"FYPO:0004802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"protein abnormally dispersed at shmoo tip","synonyms":[{"name":"abnormally dispersed protein localization at shmoo tip","type":"exact"},{"name":"protein abnormally dispersed at mating projection tip","type":"exact"},{"name":"protein abnormally dispersed at shmoo projection","type":"related"}],"termid":"FYPO:0006386"}


id: PBO:0045276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 27","termid":"PBO:0045276"}


id: MONDO:0016120
data:
  {"annotated_genes":["SJAG_02043"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011266"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal muscle disorder","termid":"MONDO:0020120"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02043":null},"genotype_count":0,"is_obsolete":false,"name":"myotonic syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D020967","Orphanet:206970","UMLS:C0553604","MedDRA:10028658","GARD:20372","MEDGEN:107510"],"termid":"MONDO:0016120","terms_by_termid":{"MONDO:0011266":null},"xrefs":{"Monarch":{"xref_id":"0016120"}}}


id: GO:0019978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-3.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"},{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"interleukin-3 binding","synonyms":[{"name":"IL-3 binding","type":"exact"}],"termid":"GO:0019978"}


id: MONDO:0006647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Necrosis occurring in the anterior cerebral artery system, including branches such as Heubner's artery. These arteries supply blood to the medial and superior parts of the cerebral hemisphere, Infarction in the anterior cerebral artery usually results in sensory and motor impairment in the lower body.","definition_xrefs":["MESH:D020243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral infarction","termid":"MONDO:0002679"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior cerebral artery infarction","secondary_identifiers":["DOID:3528","MEDGEN:148402","EFO:1000807","UMLS:C0751843"],"termid":"MONDO:0006647","xrefs":{"Monarch":{"xref_id":"0006647"}}}


id: GO:0016985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->4)-beta-D-mannosidic linkages in mannans, galactomannans, glucomannans, and galactoglucomannans.","definition_xrefs":["EC:3.2.1.78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-mannosidase activity","termid":"GO:0004567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"mannan endo-1,4-beta-mannosidase activity","secondary_identifiers":["MetaCyc:3.2.1.78-RXN"],"synonyms":[{"name":"1,4-beta-D-mannan mannanohydrolase activity","type":"related"},{"name":"beta-1,4-mannan 4-mannanohydrolase activity","type":"related"},{"name":"beta-D-mannanase activity","type":"related"},{"name":"beta-mannanase B","type":"related"},{"name":"beta-mannanase activity","type":"broad"},{"name":"endo-1,4-beta-mannanase activity","type":"related"},{"name":"endo-1,4-mannanase activity","type":"broad"},{"name":"endo-beta-1,4-mannase activity","type":"related"},{"name":"endo-beta-mannanase activity","type":"broad"}],"termid":"GO:0016985"}


id: RO:HOM0000050
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paralogy that involves genes from different species.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_paralogy_relationship_with","termid":"RO:HOM0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_between-species_paralogy_relationship_with","synonyms":[{"name":"between-species paralogous to","type":"exact"}],"termid":"RO:HOM0000050"}


id: PBO:0061069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB activating protein pseudogene 1","termid":"PBO:0061069"}


id: PATO:0001758
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A conductivity quality inhering in motor and sensory nerves by virtue of the bearer's ability to convey electricity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electrical conductivity","termid":"PATO:0001757"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nerve conductivity","termid":"PATO:0001758"}


id: MOD:01341
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["Unimod:90#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ESP-Tag light d0","termid":"MOD:00468"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESP-Tag light d0 - site K","synonyms":[{"name":"ESP","type":"related"},{"name":"ESP-Tag light d0","type":"related"}],"termid":"MOD:01341"}


id: PBO:0017753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex, platform subcomplex scaffold subunit Apc4/Cut20","termid":"PBO:0017753"}


id: PBO:0030341
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_MCM_complex_assembly","termid":"PBO:0030341"}


id: FYECO:0000229
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A temperature at which a conditional (heat- or cold-sensitive) mutant does not grow.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restrictive temperature","synonyms":[{"name":"non-permissive temperature","type":"exact"},{"name":"nonpermissive temperature","type":"exact"}],"termid":"FYECO:0000229"}


id: PBO:0058215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4507","termid":"PBO:0058215"}


id: GO:0052208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of a second organism, mediated by a substance secreted by a type IV secretion system in the first organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification of morphology or physiology of other organism via substance secreted by type IV secretion system involved in symbiotic interaction (obsolete GO:0052208)","synonyms":[{"name":"modification of morphology or physiology of other organism via substance secreted by type IV secretion system during symbiotic interaction","type":"related"}],"termid":"GO:0052208"}


id: PBO:0055985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat transmembrane neuronal 3","termid":"PBO:0055985"}


id: PBO:0111870
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-type cyclin","termid":"PBO:0111870"}


id: PBO:0018263
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae BTS1","termid":"PBO:0018263"}


id: FYPO:0006043
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of kinetochore sliding, i.e. the movement of a kinetochore along spindle microtubules, during mitotic chromosome recapture is increased.","definition_xrefs":["PomBase:mah","PMID:27146110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic metaphase chromosome recapture","termid":"FYPO:0005362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000337","FYPO:0000641"],"is_obsolete":false,"name":"increased rate of kinetochore sliding during chromosome recapture","synonyms":[{"name":"increased rate of chromosome migration during chromosome recapture","type":"exact"},{"name":"increased rate of chromosome movement during chromosome recapture","type":"exact"},{"name":"increased rate of kinetochore migration during chromosome recapture","type":"exact"},{"name":"increased rate of kinetochore sliding along kinetochore microtubule towards spindle pole body during chromosome recapture","type":"exact"},{"name":"increased rate of kinetochore sliding during chromosome recapture during mitosis","type":"exact"},{"name":"increased rate of kinetochore sliding during chromosome recapture during vegetative growth","type":"exact"},{"name":"increased rate of kinetochore sliding during kinetochore retrieval","type":"exact"},{"name":"increased rate of kinetochore sliding during kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"increased rate of kinetochore sliding during metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"increased rate of kinetochore sliding during mitotic metaphase chromosome recapture","type":"exact"},{"name":"increased rate of kinetochore sliding during sister kinetochore recapture","type":"exact"},{"name":"increased rate of kinetochore sliding towards SPB during chromosome recapture","type":"exact"},{"name":"increased rate of kinetochore sliding towards spindle pole body during chromosome recapture","type":"exact"}],"termid":"FYPO:0006043"}


id: SO:0002277
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Crypton is a superfamily of DNA transposons that use tyrosine recombinase (YR) to cut and rejoin the recombining DNA molecules.","definition_xrefs":["PMID:22011512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_transposon","termid":"SO:0000182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Crypton_YR_transposon","synonyms":[{"name":"Crypton YR transposon","type":"exact"},{"name":"Crypton transposon","type":"exact"},{"name":"DYC transposon","type":"exact"}],"termid":"SO:0002277"}


id: GO:0018776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trans-3-chloroacrylic acid + H2O = H+ + malonate semialdehyde.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-chloroacrylic acid dehalogenase activity (obsolete GO:0018776)","termid":"GO:0018776"}


id: GO:0000326
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A storage vacuole that contains a lytic vacuole; identified in plants.","definition_xrefs":["PMID:11739409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"storage vacuole","termid":"GO:0000322"},{"relation_name":"is_a","term_name":"plant-type vacuole","termid":"GO:0000325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005773","GO:0005737"],"is_obsolete":false,"name":"protein storage vacuole","termid":"GO:0000326"}


id: PBO:0042613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 13","termid":"PBO:0042613"}


id: GO:1904697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of acinar cell proliferation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:9788538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"acinar cell proliferation","termid":"GO:1990863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of acinar cell proliferation","synonyms":[{"name":"regulation of acinic cell proliferation","type":"exact"},{"name":"regulation of acinous cell proliferation","type":"exact"}],"termid":"GO:1904697"}


id: MONDO:0013072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant Emery-Dreifuss muscular dystrophy in which the cause of the disease is a mutation in the SYNE2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant Emery-Dreifuss muscular dystrophy","termid":"MONDO:0020336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005267","MONDO:0000426"],"is_obsolete":false,"name":"Emery-Dreifuss muscular dystrophy 5, autosomal dominant","secondary_identifiers":["UMLS:C2751805","MEDGEN:414111","DOID:0070250","GARD:18207","OMIM:612999"],"synonyms":[{"name":"EDMD5","type":"related"},{"name":"EMERY-Dreifuss muscular dystrophy 5, autosomal dominant","type":"related"},{"name":"Emery-Dreifuss muscular dystrophy 5, autosomal dominant","type":"exact"},{"name":"SYNE2 autosomal dominant Emery-Dreifuss muscular dystrophy","type":"exact"},{"name":"autosomal dominant Emery-Dreifuss muscular dystrophy caused by mutation in SYNE2","type":"exact"}],"termid":"MONDO:0013072","xrefs":{"Monarch":{"xref_id":"0013072"}}}


id: PBO:0056580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCTS1 re-initiation and release factor","termid":"PBO:0056580"}


id: MONDO:0016655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"6p22 microdeletion syndrome is a newly described syndrome associated with a variable clinical phenotype including developmental delay, facial dysmorphism, short neck and diverse malformations.","definition_xrefs":["Orphanet:251046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 6","termid":"MONDO:0016888"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6p22 microdeletion syndrome","secondary_identifiers":["SCTID:719662000","GARD:20691","UMLS:C4304528","MEDGEN:930197"],"synonyms":[{"name":"Del(6)(p22)","type":"exact"},{"name":"monosomy 6p22","type":"exact"}],"termid":"MONDO:0016655","xrefs":{"Monarch":{"xref_id":"0016655"}}}


id: PBO:0051154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-33-2 (pseudogene)","termid":"PBO:0051154"}


id: PBO:0027685
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_branched,_curved,_elongated_cell","termid":"PBO:0027685"}


id: MONDO:0003530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete aggressive digital papillary adenocarcinoma (obsolete MONDO:0003530)","termid":"MONDO:0003530","xrefs":{"Monarch":{"xref_id":"0003530"}}}


id: GO:1901072
data:
  {"annotated_genes":["SJAG_00620"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006032"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucosamine-containing compounds (glucosamines).","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar catabolic process","termid":"GO:0046348"},{"relation_name":"is_a","term_name":"glucosamine-containing compound metabolic process","termid":"GO:1901071"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00620":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glucosamine-containing compound catabolic process","references_by_uniquename":{"GO_REF:0000043":null},"synonyms":[{"name":"glucosamine-containing compound breakdown","type":"exact"},{"name":"glucosamine-containing compound catabolism","type":"exact"},{"name":"glucosamine-containing compound degradation","type":"exact"},{"name":"glucosamines breakdown","type":"exact"},{"name":"glucosamines catabolic process","type":"exact"},{"name":"glucosamines catabolism","type":"exact"},{"name":"glucosamines degradation","type":"exact"}],"termid":"GO:1901072","terms_by_termid":{"GO:0006032":null}}


id: SO:0001255
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polyploid where the multiple chromosome set was derived from the same organism.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyploid","termid":"SO:0001254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autopolyploid","secondary_identifiers":["http://en.wikipedia.org/wiki/Autopolyploid"],"termid":"SO:0001255"}


id: PBO:0042166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 27","termid":"PBO:0042166"}


id: GO:0022611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process in which dormancy (sometimes called a dormant state) is induced, maintained or broken. Dormancy is a suspension of most physiological activity and growth that can be reactivated.","definition_xrefs":["GOC:isa_complete","GOC:PO_curators","PO_REF:00009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dormancy process","synonyms":[{"name":"multicellular organism dormancy process","type":"narrow"},{"name":"spore dormancy process","type":"narrow"}],"termid":"GO:0022611"}


id: PBO:0078482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 5-2","termid":"PBO:0078482"}


id: GO:0036387
data:
  {"annotated_genes":["SJAG_01354","SJAG_02074","SJAG_04210","SJAG_02607","SJAG_02394","SJAG_04062","SJAG_01762","SJAG_00857","SJAG_02348","SJAG_02800","SJAG_00884","SJAG_01267","SJAG_03451","SJAG_03927","SJAG_05301"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105251,61799,113369,115165,63600,73431,113626,57177,110011,61741,67318,112537,58551,75540,109791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005656"}]},"cv_name":"cellular_component","definition":"A protein-DNA complex that forms at the origin of replication during the initial step of DNA replication and allows the origin to become competent, or 'licensed', for replication.","definition_xrefs":["GOC:jh2","GOC:bhm","Wikipedia:Pre-replication_complex","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01762":null,"SJAG_02074":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02607":null,"SJAG_02800":null,"SJAG_03451":null,"SJAG_03927":null,"SJAG_04062":null,"SJAG_04210":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"pre-replicative complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"pre-RC","type":"exact"},{"name":"pre-replication complex","type":"exact"}],"termid":"GO:0036387","terms_by_termid":{"GO:0005656":null}}


id: MONDO:1011054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycystic kidney disease that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycystic kidney disease, non-human animal","termid":"MONDO:1010262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic kidney disease, domestic cat","secondary_identifiers":["OMIA:000807-9685"],"termid":"MONDO:1011054","xrefs":{"Monarch":{"xref_id":"1011054"}}}


id: PR:Q9USV6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC27B12.14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USV6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly factor cbp4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.14","synonyms":[{"name":"Spom972h-SPBC27B12.14","type":"exact"},{"name":"cytochrome b mRNA-processing protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USV6"}


id: PBO:0083259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; may be part of a bicistronic transcript with NKP2/YLR315W; overlaps the verified ORF TAD3/YLR316C","termid":"PBO:0083259"}


id: PBO:0055962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 75A","termid":"PBO:0055962"}


id: PBO:0059868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 6","termid":"PBO:0059868"}


id: GO:0038094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the Fc portion of immunoglobulin G (IgG) to an Fc-gamma receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. The Fc portion of an immunoglobulin is its C-terminal constant region.","definition_xrefs":["PMID:11244038","GOC:phg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fc receptor signaling pathway","termid":"GO:0038093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Fc-gamma receptor signaling pathway","synonyms":[{"name":"Fc-gamma receptor signalling pathway","type":"exact"}],"termid":"GO:0038094"}


id: PBO:0083927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fumarate reductase, catalyzes the reduction of fumarate to succinate; required for the reoxidation of intracellular NADH under anaerobic conditions; acts as electron acceptor in mitochondrial intermembrane space; has two translation start sites, one at the annotated start codon which produces an ER-targeted form required for anaerobic growth, and one at codon 32 which produces a mitochondrially-targeted form; OSM1 has a paralog, FRD1, that arose from the whole genome duplication","termid":"PBO:0083927"}


id: PR:Q09782
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI ethanolamine phosphate transferase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23072:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI ethanolamine phosphate transferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.03","secondary_identifiers":["UniProtKB:Q09782"],"synonyms":[{"name":"SPAC13G6.03","type":"related"},{"name":"Spom972h-PIGG","type":"exact"},{"name":"glycosylphosphatidylinositol-anchor biosynthesis protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"gpi7","type":"related"}],"termid":"PR:Q09782"}


id: PBO:0054626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2031","termid":"PBO:0054626"}


id: GO:0045224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of CD4.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of CD4 production (obsolete GO:0045224)","synonyms":[{"name":"activation of CD4 biosynthetic process","type":"narrow"},{"name":"positive regulation of CD4 anabolism","type":"exact"},{"name":"positive regulation of CD4 biosynthesis","type":"exact"},{"name":"positive regulation of CD4 biosynthetic process","type":"exact"},{"name":"positive regulation of CD4 formation","type":"exact"},{"name":"positive regulation of CD4 synthesis","type":"exact"},{"name":"stimulation of CD4 biosynthetic process","type":"narrow"},{"name":"up regulation of CD4 biosynthetic process","type":"exact"},{"name":"up-regulation of CD4 biosynthetic process","type":"exact"},{"name":"upregulation of CD4 biosynthetic process","type":"exact"}],"termid":"GO:0045224"}


id: PBO:0040988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 2","termid":"PBO:0040988"}


id: PBO:0068052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 357","termid":"PBO:0068052"}


id: MONDO:0018535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cystadenocarcinoma that involves the biliary tree.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biliary tract cancer","termid":"MONDO:0003060"},{"relation_name":"is_a","term_name":"cystadenocarcinoma","termid":"MONDO:0005596"},{"relation_name":"is_a","term_name":"carcinoma of liver and intrahepatic biliary tract","termid":"MONDO:0018531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"biliary cystadenocarcinoma","secondary_identifiers":["GARD:21790","MEDGEN:473526","Orphanet:424982","UMLS:C2064409"],"synonyms":[{"name":"intrahepatic bile duct cystadenocarcinoma","type":"exact"}],"termid":"MONDO:0018535","xrefs":{"Monarch":{"xref_id":"0018535"}}}


id: GO:0061032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the visceral serous pericardium from its formation to the mature structure. The visceral serous pericardium is the inner layer of the pericardium.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pericardium development","termid":"GO:0060039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"visceral serous pericardium development","synonyms":[{"name":"epicardium development","type":"exact"}],"termid":"GO:0061032"}


id: PATO:0001354
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A optical quality inhering in a bearer by virtue of the bearer's exhibiting low opacity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opacity","termid":"PATO:0000957"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translucent","termid":"PATO:0001354"}


id: FYPO:0001747
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of nickel ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal nickel import","synonyms":[{"name":"abnormal cellular nickel import","type":"exact"},{"name":"abnormal nickel cation import","type":"exact"},{"name":"abnormal nickel import across plasma membrane","type":"exact"},{"name":"abnormal nickel import during mitotic cell cycle","type":"related"},{"name":"abnormal nickel import during vegetative growth","type":"exact"},{"name":"abnormal nickel import into cell","type":"exact"},{"name":"abnormal nickel ion import","type":"exact"}],"termid":"FYPO:0001747"}


id: MONDO:0858986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant spastic paraplegia type 80 (obsolete MONDO:0858986)","termid":"MONDO:0858986","xrefs":{"Monarch":{"xref_id":"0858986"}}}


id: MONDO:0001312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A acute transudative otitis media with thin, watery and sterile effusion.","definition_xrefs":["DOID:11557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute transudative otitis media","termid":"MONDO:0002738"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute serous otitis media","secondary_identifiers":["UMLS:C0155415","MEDGEN:509955","ICD9:381.01","ICD10CM:H65.0","SCTID:194240006"],"synonyms":[{"name":"acute non-suppurative otitis media - serous","type":"exact"}],"termid":"MONDO:0001312","xrefs":{"Monarch":{"xref_id":"0001312"}}}


id: GO:0047206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysyl-D-alanyl-D-alanine + L-alanyl-tRNA(Ala) = UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-N6-(L-alanyl)-L-lysyl-D-alanyl-D-alanine + tRNA(Ala).","definition_xrefs":["EC:2.3.2.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"UDP-N-acetylmuramoylpentapeptide-lysine N6-alanyltransferase activity","secondary_identifiers":["RHEA:12432","MetaCyc:2.3.2.10-RXN"],"synonyms":[{"name":"UDP-N-acetylmuramoylpentapeptide lysine N(6)-alanyltransferase activity","type":"exact"},{"name":"UDP-N-acetylmuramoylpentapeptide lysine N6-alanyltransferase activity","type":"exact"},{"name":"alanyl-transfer ribonucleate-uridine diphosphoacetylmuramoylpentapeptide transferase activity","type":"exact"},{"name":"uridine diphosphoacetylmuramoylpentapeptide lysine N(6)-alanyltransferase activity","type":"exact"},{"name":"uridine diphosphoacetylmuramoylpentapeptide lysine N6-alanyltransferase activity","type":"exact"}],"termid":"GO:0047206"}


id: MONDO:0004383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system germinoma that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system germinoma","termid":"MONDO:0002999"},{"relation_name":"is_a","term_name":"adult central nervous system germ cell tumor","termid":"MONDO:0003405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult central nervous system germinoma","secondary_identifiers":["MEDGEN:234581","NCIT:C5792","UMLS:C1370504","DOID:7867"],"synonyms":[{"name":"adult CNS germinoma","type":"exact"},{"name":"adult central nervous system germinoma","type":"exact"},{"name":"central nervous system germinoma","type":"broad"},{"name":"central nervous system germinoma of adults","type":"exact"},{"name":"germinoma of adult CNS","type":"exact"},{"name":"germinoma of adult central nervous system","type":"exact"},{"name":"germinoma of the adult CNS","type":"exact"},{"name":"germinoma of the adult central nervous system","type":"exact"}],"termid":"MONDO:0004383","xrefs":{"Monarch":{"xref_id":"0004383"}}}


id: GO:0060427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of lung connective tissue from an initial condition to its mature state. This process begins with the formation of lung connective tissue and ends with the mature structure. The lung connective tissue is a material made up of fibers forming a framework and support structure for the lungs.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue development","termid":"GO:0061448"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung connective tissue development","synonyms":[{"name":"pulmonary connective tissue development","type":"exact"}],"termid":"GO:0060427"}


id: PBO:0027351
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-curved,_elongated,_multinucleate_multiseptate_vegetative_cell","termid":"PBO:0027351"}


id: PBO:0071282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 5","termid":"PBO:0071282"}


id: PR:O74653
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pob1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein pob1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.04c","synonyms":[{"name":"BOI protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pob1","type":"exact"}],"termid":"PR:O74653"}


id: GO:0070948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of neutrophil mediated killing of a target cell, the directed killing of a target cell by a neutrophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte mediated cytotoxicity","termid":"GO:0001910"},{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"regulates","term_name":"neutrophil mediated cytotoxicity","termid":"GO:0070942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil mediated cytotoxicity","synonyms":[{"name":"regulation of neutrophil mediated cell killing","type":"exact"}],"termid":"GO:0070948"}


id: GO:0072297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the proximal tubule of the metanephric nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of proximal tubule identity","termid":"GO:0072082"},{"relation_name":"is_a","term_name":"specification of metanephric nephron tubule identity","termid":"GO:0072293"},{"relation_name":"part_of","term_name":"metanephric proximal tubule morphogenesis","termid":"GO:0072288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of metanephric proximal tubule identity","termid":"GO:0072297"}


id: GO:0160012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-(2E)-butenoyl-L-lysyl-[histone] + NAD+ = 2''-O-(2E)-but-2-enoyl-ADP-D-ribose + L-lysyl-[histone] + nicotinamide.","definition_xrefs":["PMID:28497810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone decrotonylase activity","termid":"GO:0160009"},{"relation_name":"is_a","term_name":"NAD-dependent protein decrotonylase activity","termid":"GO:0160011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016746","GO:0016810","GO:0140096","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"NAD-dependent histone decrotonylase activity","termid":"GO:0160012"}


id: PBO:0035950
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_centromeric_chromatin_during_mitotic_G1_phase","termid":"PBO:0035950"}


id: PBO:0065499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis susceptibility 1 candidate 1","termid":"PBO:0065499"}


id: FYPO:0000627
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 a.a.)","uniquename":"SJAG_01143:allele-2"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121404,121405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[121397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"},{"annotations":[121132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001007"},{"annotations":[121429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000644"},{"annotations":[121144,121147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000579"},{"annotations":[121146,121143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000590"},{"annotations":[121395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000596"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a specific cellular process is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process phenotype","termid":"FYPO:0000114"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01143":null,"SJAG_01355":null,"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null,"SJAG_04883":null},"genotype_count":7,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"mid1-delta(711-723 a.a.)(aa)","display_uniquename":"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-2","expression":"Not assayed or wild type"}]}]},"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_03689","SJAG_03118"],"name":"normal cellular process","references_by_uniquename":{"PMID:25866389":null,"PMID:35226668":null,"PMID:36695178":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_00601","SJAG_01143","SJAG_01355","SJAG_03689","SJAG_04883"],"single_locus_genotype_uniquenames":["ptp4delta","rip1delta","mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","cox6delta","dcr1delta"],"termid":"FYPO:0000627","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000579":null,"FYPO:0000590":null,"FYPO:0000596":null,"FYPO:0000644":null,"FYPO:0001007":null,"FYPO:0006989":null,"FYPO_EXT:0000001":null}}


id: PBO:0083167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps verified ORF PAD1/YDR538W","termid":"PBO:0083167"}


id: PBO:0078804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 21-1","termid":"PBO:0078804"}


id: FYPO:0006784
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which vacuoles tubule-shaped.","definition_xrefs":["PomBase:mah","PMID:30451685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar morphology during vegetative growth","termid":"FYPO:0000368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"tubular vacuole morphology during vegetative growth","synonyms":[{"name":"tubular vacuole morphology during mitotic cell cycle","type":"related"},{"name":"tubular-shaped vacuoles during vegetative growth","type":"exact"}],"termid":"FYPO:0006784"}


id: PBO:0071998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7","termid":"PBO:0071998"}


id: PBO:0072872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SATB homeobox 2","termid":"PBO:0072872"}


id: MONDO:0030813
data:
  {"annotated_genes":["SJAG_03181"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88827],"is_not":false,"summary":null,"term":"MONDO:0030813"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 101 (varicella zoster virus-specific)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619872","MEDGEN:1810668","UMLS:C5676983"],"synonyms":[{"name":"IMD101","type":"exact"},{"name":"immunodeficiency 101 (varicella zoster virus-specific)","type":"exact"}],"termid":"MONDO:0030813","terms_by_termid":{"MONDO:0030813":null},"xrefs":{"Monarch":{"xref_id":"0030813"}}}


id: MONDO:0032878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with behavioral abnormalities, absent speech, and hypotonia","secondary_identifiers":["UMLS:C5231471","MEDGEN:1684663","OMIM:618718"],"synonyms":[{"name":"NEDBASH","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH BEHAVIORAL ABNORMALITIES, ABSENT SPEECH, AND HYPOTONIA","type":"related"}],"termid":"MONDO:0032878","xrefs":{"Monarch":{"xref_id":"0032878"}}}


id: MONDO:1011511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glaucoma that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glaucoma, non-human animal","termid":"MONDO:1011457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glaucoma, domestic cat","secondary_identifiers":["OMIA:000411-9685"],"termid":"MONDO:1011511","xrefs":{"Monarch":{"xref_id":"1011511"}}}


id: GO:0007573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete age dependent increased protein content (obsolete GO:0007573)","synonyms":[{"name":"age dependent increased protein content","type":"exact"}],"termid":"GO:0007573"}


id: FYPO:0003798
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the second meiotic nuclear division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiosis","termid":"FYPO:0000478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiosis II","synonyms":[{"name":"normal second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003798"}


id: PBO:0035746
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_transport_along_microtubule_to_cell_tip_during_vegetative_growth","termid":"PBO:0035746"}


id: GO:0072036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a mesenchymal cell establishes apical/basolateral polarity,forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell that will contribute to the shaping of the renal vesicle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in kidney development","termid":"GO:0035850"},{"relation_name":"is_a","term_name":"mesenchymal to epithelial transition","termid":"GO:0060231"},{"relation_name":"part_of","term_name":"renal vesicle formation","termid":"GO:0072033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal to epithelial transition involved in renal vesicle formation","termid":"GO:0072036"}


id: FYPO:0002036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an endodeoxyribonuclease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"abnormal nuclease activity","termid":"FYPO:0003163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000002","FYPO:0000707","FYPO:0005447","FYPO:0000661"],"is_obsolete":false,"name":"abnormal endodeoxyribonuclease activity","termid":"FYPO:0002036"}


id: PBO:0029282
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_mitotic_spindle_pole_body_during_G2","termid":"PBO:0029282"}


id: GO:0075276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of telium development, a process that leads to the formation of a teliospore-bearing sorus of the rust fungi.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"regulates","term_name":"telium development","termid":"GO:0075275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of telium development","termid":"GO:0075276"}


id: PBO:0003008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER unfolded protein response protein (predicted)","termid":"PBO:0003008"}


id: PBO:0005101
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not detected in other Schizos","termid":"PBO:0005101"}


id: MONDO:0006724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete desmoplastic small round cell tumor (obsolete MONDO:0006724)","termid":"MONDO:0006724","xrefs":{"Monarch":{"xref_id":"0006724"}}}


id: PBO:0084350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Large subunit of the nuclear mRNA cap-binding protein complex; interacts with Npl3p to carry nuclear poly(A)+ mRNA to cytoplasm; also involved in nuclear mRNA degradation and telomere maintenance; orthologous to mammalian CBP80","termid":"PBO:0084350"}


id: PBO:0081731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 662","termid":"PBO:0081731"}


id: MONDO:0005510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Collection of urine in the renal pelvis that results in dilatation of the renal pelvis and calyces. It is caused by obstruction of urine flow, nephrolithiasis, or vesicoureteral reflux. Signs and symptoms include flank pain, nausea, vomiting, fever, and dysuria.","definition_xrefs":["EFO:0005562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary tract obstruction","termid":"MONDO:0003330"},{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hydronephrosis","secondary_identifiers":["MEDGEN:42531","ICD9:591","NCIT:C26796","DOID:11111","MESH:D006869","SCTID:43064006","UMLS:C0020295"],"termid":"MONDO:0005510","xrefs":{"Monarch":{"xref_id":"0005510"}}}


id: GO:2000879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dipeptide transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dipeptide transport","termid":"GO:0090089"},{"relation_name":"is_a","term_name":"negative regulation of oligopeptide transport","termid":"GO:2000877"},{"relation_name":"negatively_regulates","term_name":"dipeptide transport","termid":"GO:0042938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of dipeptide transport","termid":"GO:2000879"}


id: FYPO:0003234
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at heterochromatin domains is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K9 methylation at heterochromatin domain during vegetative growth","synonyms":[{"name":"normal histone H3 K9 methylation at heterochromatin domain during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at HOOD during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at heterochromatin domain during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9me at heterochromatin domain during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 methylation at heterochromatin domain during vegetative growth","type":"exact"}],"termid":"FYPO:0003234"}


id: GO:0106009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:(4S)-4-hydroxy-2-oxoglutarate = pyruvate + glyoxylate. Specific for the (4S) enantiomer of 4-hydroxy-2-oxoglutarate.","definition_xrefs":["PMID:1339418","RHEA:35639","PMID:1098660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(4S)-4-hydroxy-2-oxoglutarate aldolase activity","secondary_identifiers":["EC:4.1.3.42"],"termid":"GO:0106009"}


id: PBO:0089181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM22 inner membrane protein insertion complex subunit Tim22","termid":"PBO:0089181"}


id: PBO:0060849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nei like DNA glycosylase 3","termid":"PBO:0060849"}


id: PBO:0031526
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA-1,N6-ethenoadenine_N-glycosylase_activity","termid":"PBO:0031526"}


id: GO:0045056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of endocytosed material through the cell and its exocytosis from the plasma membrane at the opposite side.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"transcytosis","secondary_identifiers":["Wikipedia:Transcytosis"],"termid":"GO:0045056"}


id: PBO:0028808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_genetic_imprinting_at_mating-type_locus","termid":"PBO:0028808"}


id: GO:0098615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + dimethyl selenide => S-adenosyl-L-homocysteine + trimethylselenonium.","definition_xrefs":["PMID:17988700","PMID:3350800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"dimethyl selenide methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-2408554"],"termid":"GO:0098615"}


id: PBO:0055746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA regulator of hepatic lineages 1","termid":"PBO:0055746"}


id: PR:P36596
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A squalene synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02641","PANTHER:PTHR11626:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"squalene synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.05c","secondary_identifiers":["UniProtKB:P36596"],"synonyms":[{"name":"FPP:FPP farnesyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SQS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FDFT1","type":"exact"},{"name":"farnesyl-diphosphate farnesyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36596"}


id: PBO:0042484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 9","termid":"PBO:0042484"}


id: PBO:0083320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF IRC24/YIR036C","termid":"PBO:0083320"}


id: PBO:0076714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 20","termid":"PBO:0076714"}


id: GO:0035126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring after embryonic development, by which the anatomical structures of the genitalia are generated and organized.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genitalia morphogenesis","termid":"GO:0035112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic genitalia morphogenesis","synonyms":[{"name":"post-embryonic genital morphogenesis","type":"related"}],"termid":"GO:0035126"}


id: PBO:0036172
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036172"}


id: PBO:0017677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione synthetase large and small subunit Gsa1","termid":"PBO:0017677"}


id: GO:0004556
data:
  {"annotated_genes":["SJAG_02435","SJAG_00096","SJAG_00485","SJAG_04789","SJAG_04238","SJAG_01029"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59967,60607,62100,64833,67831,68875],"is_not":false,"summary":null,"term":"GO:0004556"}]},"cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more alpha-(1->4)-linked D-glucose units.","definition_xrefs":["PMID:12527308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylase activity","termid":"GO:0016160"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00096":null,"SJAG_00485":null,"SJAG_01029":null,"SJAG_02435":null,"SJAG_04238":null,"SJAG_04789":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"alpha-amylase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null},"secondary_identifiers":["Reactome:R-HSA-188979","EC:3.2.1.1","Reactome:R-HSA-191114","GO:0103025","MetaCyc:ALPHA-AMYL-RXN"],"synonyms":[{"name":"1,4-alpha-D-glucan glucanohydrolase activity","type":"related"},{"name":"alpha amylase activity","type":"related"},{"name":"alpha-amylase activity (releasing maltohexaose)","type":"narrow"},{"name":"endoamylase activity","type":"related"},{"name":"glycogenase activity","type":"broad"},{"name":"taka-amylase A","type":"related"}],"termid":"GO:0004556","terms_by_termid":{"GO:0004556":null}}


id: MONDO:0011217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Desmosterolosis is a very rare sterol biosynthesis disorder characterized by multiple congenital anomalies, failure to thrive, and intellectual disability, with elevated levels of desmosterol.","definition_xrefs":["Orphanet:35107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal osteosclerotic dysplasia","termid":"MONDO:0019702"},{"relation_name":"is_a","term_name":"cholesterol biosynthetic process disease","termid":"MONDO:0045017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"desmosterolosis","secondary_identifiers":["UMLS:C1865596","GARD:10283","icd11.foundation:2108931494","MESH:C566555","ICD9:272.8","OMIM:602398","MEDGEN:400801","SCTID:709490002"],"synonyms":[{"name":"desmosterolosis","type":"exact"}],"termid":"MONDO:0011217","xrefs":{"Monarch":{"xref_id":"0011217"}}}


id: PBO:0058480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5587","termid":"PBO:0058480"}


id: GO:0030885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency or rate of myeloid dendritic cell activation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte activation","termid":"GO:0002694"},{"relation_name":"regulates","term_name":"myeloid dendritic cell activation","termid":"GO:0001773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myeloid dendritic cell activation","termid":"GO:0030885"}


id: PBO:0090866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane fission complex, WD repeat subunit Mdv1","termid":"PBO:0090866"}


id: GO:0008875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-gluconate + NADP+ = dehydro-D-gluconate + NADPH + H+.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"gluconate dehydrogenase activity","termid":"GO:0008875"}


id: GO:0072353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of reactive oxygen species, where the change varies according to the age of the cell or organism.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular age-dependent response to reactive oxygen species (obsolete GO:0072353)","termid":"GO:0072353"}


id: PBO:0052137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily H member 4","termid":"PBO:0052137"}


id: GO:2000124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endocannabinoid signaling pathway.","definition_xrefs":["GOC:mah","PMID:15550444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"endocannabinoid signaling pathway","termid":"GO:0071926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of endocannabinoid signaling pathway","synonyms":[{"name":"regulation of endocannabinoid signalling pathway","type":"exact"}],"termid":"GO:2000124"}


id: GO:0009316
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric enzyme complex composed of subunits leuC and leuD. Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.","definition_xrefs":["MetaCyc:3-ISOPROPYLMALISOM-CPLX","PMID:7026530","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005575","GO:0005829","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"3-isopropylmalate dehydratase complex","synonyms":[{"name":"isopropylmalate isomerase complex","type":"exact"}],"termid":"GO:0009316"}


id: PBO:0060030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 18","termid":"PBO:0060030"}


id: MONDO:0025491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Common coronavirus infection of cats caused by the feline infectious peritonitis virus (coronavirus, feline). The disease is characterized by a long incubation period, fever, depression, loss of appetite, wasting, and progressive abdominal enlargement. Infection of cells of the monocyte-macrophage lineage appears to be essential in FIP pathogenesis.","definition_xrefs":["MESH:D016766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cat disease","termid":"MONDO:0024912"},{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline infectious peritonitis","synonyms":[{"name":"FIP","type":"exact"},{"name":"feline infectious peritonitides","type":"exact"},{"name":"infectious peritonitides, feline","type":"exact"},{"name":"infectious peritonitis, feline","type":"exact"},{"name":"peritonitis, feline infectious","type":"exact"},{"name":"peritonitis, infectious, feline","type":"exact"}],"termid":"MONDO:0025491","xrefs":{"Monarch":{"xref_id":"0025491"}}}


id: GO:0018822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aliphatic amide = a nitrile + H2O.","definition_xrefs":["RHEA:12673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"nitrile hydratase activity","secondary_identifiers":["EC:4.2.1.84","MetaCyc:NITRILE-HYDRATASE-RXN"],"synonyms":[{"name":"3-cyanopyridine hydratase activity","type":"narrow"},{"name":"H-NHase activity","type":"related"},{"name":"L-NHase activity","type":"related"},{"name":"NHase activity","type":"related"},{"name":"acrylonitrile hydratase activity","type":"related"},{"name":"aliphatic nitrile hydratase activity","type":"related"},{"name":"aliphatic-amide hydro-lyase (nitrile-forming)","type":"related"},{"name":"nitrile hydro-lyase activity","type":"related"}],"termid":"GO:0018822"}


id: MONDO:0006907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, small, papular or nodular skin neoplasm that usually arises above the upper lip. It is characterized by an epithelial proliferation with a central cavity. The cavity wall is lined with keratinocytes.","definition_xrefs":["NCIT:C4468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acanthoma","termid":"MONDO:0002093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pilar sheath acanthoma","secondary_identifiers":["MEDGEN:83398","DOID:4322","SCTID:254693008","icd11.foundation:281473034","UMLS:C0346005"],"synonyms":[{"name":"Infundibuloisthmicoma","type":"exact"},{"name":"Pilar sheath acanthoma","type":"exact"},{"name":"acanthoma of Pilar sheath","type":"exact"},{"name":"acanthoma of the Pilar sheath","type":"exact"}],"termid":"MONDO:0006907","xrefs":{"Monarch":{"xref_id":"0006907"}}}


id: GO:0034634
data:
  {"annotated_genes":["SJAG_03577","SJAG_01660"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97428,115126],"is_not":false,"summary":null,"term":"GO:0034634"}]},"cv_name":"molecular_function","definition":"Enables the transfer of glutathione, the tripeptide glutamylcysteinylglycine, from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"tripeptide transmembrane transporter activity","termid":"GO:0042937"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01660":null,"SJAG_03577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"glutathione transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034634","terms_by_termid":{"GO:0034634":null}}


id: PBO:0056287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase endo-alpha like","termid":"PBO:0056287"}


id: PBO:0054642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2047","termid":"PBO:0054642"}


id: FYPO:0004304
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a phosphatase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased phosphatase activity","synonyms":[{"name":"reduced phosphatase activity","type":"exact"}],"termid":"FYPO:0004304"}


id: MONDO:0021575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited oocyte maturation defect","termid":"MONDO:0014769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oocyte maturation defect 4","secondary_identifiers":["OMIM:617743","UMLS:C4540284","GARD:18497","MEDGEN:1616340"],"synonyms":[{"name":"OOMD4","type":"exact"},{"name":"oocyte maturation defect 4","type":"exact"}],"termid":"MONDO:0021575","xrefs":{"Monarch":{"xref_id":"0021575"}}}


id: PBO:0081346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 154","termid":"PBO:0081346"}


id: GO:0102728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (5alpha)-campestan-3-one + NADP = H+ + campest-4-en-3-one + NADPH.","definition_xrefs":["EC:1.3.1.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete campest-4-en-3-one,NADPH:steroid 5alpha-reductase activity (obsolete GO:0102728)","termid":"GO:0102728"}


id: PBO:0060464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NALCN channel auxiliary factor 1","termid":"PBO:0060464"}


id: PATO:0002002
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The bearer of this quality has_part > n of the indicated entity type, where n is the normal amount for a comparable organism. Note that the bearer of the quality is the whole, not the part.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"altered number of","termid":"PATO:0002083"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has extra parts of type","secondary_identifiers":["PATO:0001560"],"synonyms":[{"name":"has extra parts of","type":"exact"},{"name":"has increased number of","type":"exact"},{"name":"having extra physical parts","type":"exact"},{"name":"having supernumerary physical parts","type":"exact"},{"name":"increased number of","type":"exact"}],"termid":"PATO:0002002"}


id: PBO:0087927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transferrin receptor-like protein; functions with Tre1p to regulate ubiquitination and vacuolar degradation of the metal transporter Smf1p; inviability of null mutant in systematic studies is due to proximity to CDC31; TRE2 has a paralog, TRE1, that arose from the whole genome duplication","termid":"PBO:0087927"}


id: GO:0005982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving starch, the most important reserve polysaccharide in plants. It is a glucan consisting of two components, amylose and amylopectin, which are both glucose homopolymers. Starch is synthesized as a temporary storage form of carbon and can be catabolized to produce sucrose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"starch metabolic process","synonyms":[{"name":"starch metabolism","type":"exact"}],"termid":"GO:0005982"}


id: PBO:0039530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 34A","termid":"PBO:0039530"}


id: GO:0002644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tolerance induction","synonyms":[{"name":"down regulation of tolerance induction","type":"exact"},{"name":"down-regulation of tolerance induction","type":"exact"},{"name":"downregulation of tolerance induction","type":"exact"},{"name":"inhibition of tolerance induction","type":"narrow"}],"termid":"GO:0002644"}


id: MONDO:0011423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive limb girdle muscular dystrophy type 2E (LGMD2E) is a subtype of autosomal recessive limb girdle muscular dystrophy characterized by a childhood to adolescent onset of progressive pelvic- and shoulder-girdle muscle weakness, particularly affecting the pelvic girdle (adductors and flexors of hip). Usually the knees are the earliest and most affected muscles. In advanced stages, involvement of the shoulder girdle (resulting in scapular winging) and the distal muscle groups are observed. Calf hypertrophy, cardiomyopathy, respiratory impairment, tendon contractures, scoliosis, and exercise-induced myoglobinuria may be observed.","definition_xrefs":["Orphanet:119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of beta-sarcoglycan","termid":"MONDO:0016142"},{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005267","MONDO:0005336"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2E","secondary_identifiers":["SCTID:718850008","UMLS:C1858593","DOID:0110279","MEDGEN:347674","GARD:3851","OMIM:604286"],"synonyms":[{"name":"LGMD due to beta-sarcoglycan deficiency","type":"exact"},{"name":"LGMD type 2E","type":"exact"},{"name":"LGMD2E","type":"exact"},{"name":"LGMDR4","type":"exact"},{"name":"SGCB autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in SGCB","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy type 2E","type":"exact"},{"name":"beta-sarcoglycan limb-girdle muscular dystrophy","type":"related"},{"name":"beta-sarcoglycan-related LGMD R4","type":"exact"},{"name":"beta-sarcoglycan-related limb-girdle muscular dystrophy R4","type":"exact"},{"name":"beta-sarcoglycanopathy","type":"broad"},{"name":"limb-girdle muscular dystrophy due to beta-sarcoglycan deficiency","type":"exact"},{"name":"limb-girdle muscular dystrophy type 2E","type":"exact"},{"name":"muscular dystrophy limb-girdle with beta-sarcoglycan deficiency","type":"related"},{"name":"muscular dystrophy, limb-girdle, autosomal recessive 4","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2E","type":"exact"}],"termid":"MONDO:0011423","xrefs":{"Monarch":{"xref_id":"0011423"}}}


id: GO:0035636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of information between living organisms.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism signaling (obsolete GO:0035636)","synonyms":[{"name":"multi-organism signalling","type":"exact"},{"name":"pheromone signaling","type":"narrow"},{"name":"signaling between organisms","type":"exact"},{"name":"signaling with other organism","type":"exact"}],"termid":"GO:0035636"}


id: GO:0048338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the mesoderm. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"mesoderm morphogenesis","termid":"GO:0048332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesoderm structural organization","synonyms":[{"name":"mesoderm structural organisation","type":"exact"}],"termid":"GO:0048338"}


id: GO:0035035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an histone acetyltransferase.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"histone acetyltransferase binding","synonyms":[{"name":"histone acetylase binding","type":"exact"}],"termid":"GO:0035035"}


id: MONDO:0016844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trisomy 20p is a chromosomal disorder resulting from duplication of all or part of the short arm of chromosome 20. It is mostly characterized by normal growth, mild to moderate intellectual disability, speech delay, poor coordination and evocative facial features.","definition_xrefs":["Orphanet:261318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial trisomy of chromosome 20","termid":"MONDO:0016938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trisomy 20p","secondary_identifiers":["MESH:C535371","ICD9:758.5","SCTID:111311004","GARD:5333","UMLS:C2930888","MEDGEN:418939"],"synonyms":[{"name":"20p duplication","type":"related"},{"name":"20p trisomy","type":"related"},{"name":"Duplication 20p","type":"related"},{"name":"Duplication of 20p","type":"exact"},{"name":"chromosome 20p duplication","type":"related"},{"name":"dup(20p)","type":"exact"},{"name":"partial duplication of chromosome 20p","type":"exact"},{"name":"partial duplication of the short arm of chromosome 20","type":"exact"},{"name":"partial trisomy 20p","type":"related"},{"name":"partial trisomy of chromosome 20p","type":"exact"},{"name":"partial trisomy of the short arm of chromosome 20","type":"exact"},{"name":"trisomy 20p","type":"exact"},{"name":"trisomy type 20p","type":"exact"}],"termid":"MONDO:0016844","xrefs":{"Monarch":{"xref_id":"0016844"}}}


id: GO:0060242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which information about the density of cells in a population is received by direct cell-cell contact and is converted into a molecular signal, resulting in the cessation of cell growth or proliferation.","definition_xrefs":["PMID:17376520","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of cell density","termid":"GO:0060245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"contact inhibition","secondary_identifiers":["GO:0060246","GO:0060248","Wikipedia:Contact_inhibition"],"synonyms":[{"name":"detection of cell density by contact stimulus","type":"related"},{"name":"detection of cell density by contact stimulus involved in contact inhibition","type":"related"}],"termid":"GO:0060242"}


id: GO:0071113
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaIIb-beta3 integrin complex bound to the cell adhesion molecule ICAM-4.","definition_xrefs":["PMID:12477717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alphaIIb-beta3 integrin-ICAM-4 complex","synonyms":[{"name":"ITGAIIb-ITGB3-ICAM4 complex","type":"narrow"}],"termid":"GO:0071113"}


id: PBO:0059190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member F","termid":"PBO:0059190"}


id: PBO:0050591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock factor binding protein 1 pseudogene 2","termid":"PBO:0050591"}


id: PBO:0044408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily F member 1","termid":"PBO:0044408"}


id: FYPO:0002449
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer signal recognition particles (SRPs) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"signal recognition particles present in decreased numbers","synonyms":[{"name":"SRPs present in decreased numbers","type":"exact"},{"name":"decreased level of SRPs","type":"related"},{"name":"decreased signal recognition particle formation during vegetative growth","type":"related"},{"name":"fewer signal recognition particles present during vegetative growth","type":"exact"},{"name":"signal recognition particles present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"signal recognition particles present in decreased numbers during vegetative growth","type":"exact"},{"name":"signal recognition particles present in reduced numbers","type":"exact"}],"termid":"FYPO:0002449"}


id: PBO:0082511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the DNA polymerase I alpha-primase complex; required for the initiation of DNA replication during mitotic DNA synthesis and premeiotic DNA synthesis","termid":"PBO:0082511"}


id: PBO:0082990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic catalase T; has a role in protection from oxidative damage by hydrogen peroxide","termid":"PBO:0082990"}


id: MONDO:0005460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute viral respiratory infection caused by a strain of influenza virus which is endemic in swine (pigs). Rarely reported in humans prior to 2009, the disease is caused by a mutated strain of swine influenza A (H1N1) virus. It is highly contagious and spreads mainly through coughing and sneezing. Signs and symptoms include fever, chills, coughing, sore throat headache, muscle ache, and generalized weakness. Antiviral medications are most effective in the first two days of the illness.","definition_xrefs":["NCIT:C80444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"influenza","termid":"MONDO:0005812"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swine influenza","secondary_identifiers":["EFO:0005226","SCTID:442696006","UMLS:C0276357","MEDGEN:1385137","DOID:0050211"],"synonyms":[{"name":"H1N1 Influenza","type":"exact"},{"name":"H1N1 Virus infection","type":"exact"},{"name":"H1N1 flu","type":"exact"},{"name":"Influenza A (H1N1)","type":"exact"},{"name":"Influenza A (H1N1) Virus infection","type":"exact"},{"name":"Swine influenza virus caused influenza","type":"exact"},{"name":"Swine influenza virus influenza","type":"exact"},{"name":"swine flu","type":"exact"}],"termid":"MONDO:0005460","xrefs":{"Monarch":{"xref_id":"0005460"}}}


id: MONDO:0008983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal instability with tissue-specific radiosensitivity","secondary_identifiers":["OMIM:215510","UMLS:C1859091","MEDGEN:347797","MESH:C565848"],"synonyms":[{"name":"chromosomal instability with tissue-specific radiosensitivity","type":"exact"}],"termid":"MONDO:0008983","xrefs":{"Monarch":{"xref_id":"0008983"}}}


id: PBO:0071759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 6","termid":"PBO:0071759"}


id: GO:0070728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to L-leucine, 2-amino-4-methylpentanoic acid.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"L-leucine binding","synonyms":[{"name":"Leu binding","type":"broad"},{"name":"leucine binding","type":"broad"}],"termid":"GO:0070728"}


id: PBO:0050786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 2C","termid":"PBO:0050786"}


id: MONDO:0006010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A systemic infection of various salmonid and a few nonsalmonid fishes caused by Viral hemorrhagic septicemia virus (see novirhabdovirus),","definition_xrefs":["MESH:D031941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fish disease","termid":"MONDO:0024934"},{"relation_name":"is_a","term_name":"Rhabdoviridae infectious disease, non-human animal","termid":"MONDO:0700072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salmonid viral hemorrhagic septicemia","secondary_identifiers":["EFO:0007539"],"termid":"MONDO:0006010","xrefs":{"Monarch":{"xref_id":"0006010"}}}


id: PBO:0066859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 159","termid":"PBO:0066859"}


id: PBO:0040224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 1","termid":"PBO:0040224"}


id: PBO:0041566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 open reading frame 96","termid":"PBO:0041566"}


id: MONDO:0800121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An interstitial lung disease specific to infancy that is characterized by tachypnea at birth and persistent disease, diffuse interstitial thickening due to pale oval and spindle-shaped histiocytes without scarring.","definition_xrefs":["PMID:1555422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease specific to infancy","termid":"MONDO:0017019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular interstitial pneumonitis","termid":"MONDO:0800121","xrefs":{"Monarch":{"xref_id":"0800121"}}}


id: GO:1990476
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synaptic vesicle belonging to the pool that remain unreleased even after prolonged stimulation causes a saturating degree of vesicular turnover. 50-80% of the total number of synaptic vesicles at a resting terminal bouton are in this pool.","definition_xrefs":["PMID:22745285","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle","termid":"GO:0008021"},{"relation_name":"part_of","term_name":"terminal bouton","termid":"GO:0043195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"synaptic vesicle, resting pool","synonyms":[{"name":"reserve pool of synaptic vesicles","type":"exact"},{"name":"resting pool of synaptic vesicles","type":"exact"}],"termid":"GO:1990476"}


id: PR:O14256
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6G10.10c gene.","definition_xrefs":["UniProtKB:O14256","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6G10.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.10c","synonyms":[{"name":"Spom972h-SPAC6G10.10c","type":"exact"}],"termid":"PR:O14256"}


id: GO:0019810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to putrescine, 1,4-diaminobutane, the polyamine formed by decarboxylation of ornithine and the metabolic precursor of spermidine and spermine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine binding","termid":"GO:0019808"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"putrescine binding","termid":"GO:0019810"}


id: MONDO:0005927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with polyomavirus, which are often cultured from the urine of kidney transplant patients. Excretion of bk virus is associated with ureteral strictures and cystitis, and that of jc virus with progressive multifocal leukoencephalopathy (leukoencephalopathy, progressive multifocal).","definition_xrefs":["MESH:D027601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyomavirus infectious disease","secondary_identifiers":["UMLS:C0949804","EFO:0007451","MEDGEN:215447"],"termid":"MONDO:0005927","xrefs":{"Monarch":{"xref_id":"0005927"}}}


id: GO:1900841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of helvolic acid biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid biosynthetic process","termid":"GO:0010894"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of helvolic acid biosynthetic process","termid":"GO:1900840"},{"relation_name":"negatively_regulates","term_name":"helvolic acid biosynthetic process","termid":"GO:1900812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0019748","GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of helvolic acid biosynthetic process","synonyms":[{"name":"down regulation of helvolic acid biosynthetic process","type":"exact"},{"name":"down-regulation of helvolic acid biosynthetic process","type":"exact"},{"name":"downregulation of helvolic acid biosynthetic process","type":"exact"}],"termid":"GO:1900841"}


id: PBO:0045789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epididymal protein 3D, pseudogene","termid":"PBO:0045789"}


id: GO:0034610
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the exonucleolytic cleavage of oligodeoxyribonucleotides to yield deoxyribonucleoside 5'-phosphates.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete oligodeoxyribonucleotidase activity (obsolete GO:0034610)","synonyms":[{"name":"DNA oligonucleotidase activity","type":"exact"}],"termid":"GO:0034610"}


id: MONDO:0100587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital disorder of glycosylation in which the cause of the disease is a mutation in A4GALT.","definition_xrefs":["PMID:30454869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"A4GALT-congenital disorder of glycosylation","synonyms":[{"name":"A4GALT-CDG","type":"exact"},{"name":"A4GALT-congenital disorder of glycosylation","type":"exact"},{"name":"A4GALT-related congenital disorder of glycosylation","type":"exact"}],"termid":"MONDO:0100587","xrefs":{"Monarch":{"xref_id":"0100587"}}}


id: GO:0080149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of translation as a result of increase in sucrose level.","definition_xrefs":["PMID:19403731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation in response to stress","termid":"GO:0032055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"sucrose induced translational repression","synonyms":[{"name":"negative regulation of translation in response to sucrose","type":"exact"}],"termid":"GO:0080149"}


id: MONDO:0018761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system cancer","termid":"MONDO:0000376"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"},{"relation_name":"is_a","term_name":"respiratory tract neoplasm","termid":"MONDO:0020641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"SMARCA4-deficient sarcoma of thorax","secondary_identifiers":["DOID:0080532","GARD:21943","NCIT:C183115","UMLS:C5554190","MEDGEN:1806595","Orphanet:466962"],"synonyms":[{"name":"SMARCA4-deficient thoracic sarcoma","type":"exact"}],"termid":"MONDO:0018761","xrefs":{"Monarch":{"xref_id":"0018761"}}}


id: PBO:0063005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet activating factor acetylhydrolase 1b regulatory subunit 1 pseudogene 2","termid":"PBO:0063005"}


id: PBO:0080828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YY1-associated myogenesis RNA 1","termid":"PBO:0080828"}


id: PBO:0051316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-118 (pseudogene)","termid":"PBO:0051316"}


id: MONDO:0012849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the CC2D2A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome with oculorenal defect","termid":"MONDO:0009480"},{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0020022","MONDO:0006025"],"is_obsolete":false,"name":"Joubert syndrome 9","secondary_identifiers":["MESH:C567364","NCIT:C181002","DOID:0111004","UMLS:C2676788","OMIM:612285","MEDGEN:382940","GARD:15549"],"synonyms":[{"name":"CC2D2A Joubert syndrome","type":"exact"},{"name":"JBTS9","type":"exact"},{"name":"Joubert syndrome 9","type":"exact"},{"name":"Joubert syndrome 9/15, digenic","type":"related"},{"name":"Joubert syndrome caused by mutation in CC2D2A","type":"exact"},{"name":"Joubert syndrome type 9","type":"exact"}],"termid":"MONDO:0012849","xrefs":{"Monarch":{"xref_id":"0012849"}}}


id: PBO:0064689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 25","termid":"PBO:0064689"}


id: MONDO:0012983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cone-rod dystrophy in which the cause of the disease is a mutation in the PROM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"},{"relation_name":"is_a","term_name":"PROM1-related retinopathy","termid":"MONDO:1040056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy 12","secondary_identifiers":["MEDGEN:393334","UMLS:C2675210","MESH:C567206","DOID:0111019","GARD:15577","OMIM:612657"],"synonyms":[{"name":"CORD12","type":"exact"},{"name":"PROM1 cone-rod dystrophy","type":"exact"},{"name":"cone-rod dystrophy 12","type":"exact"},{"name":"cone-rod dystrophy caused by mutation in PROM1","type":"exact"},{"name":"cone-rod dystrophy type 12","type":"exact"}],"termid":"MONDO:0012983","xrefs":{"Monarch":{"xref_id":"0012983"}}}


id: PBO:0044192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin A","termid":"PBO:0044192"}


id: PBO:0091455
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptide TRNA Hydrolase","termid":"PBO:0091455"}


id: SO:0001173
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence of seven nucleotide bases in tRNA which contains the anticodon. It has the sequence 5'-pyrimidine-purine-anticodon-modified purine-any base-3.","definition_xrefs":["ISBN:0716719207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_region","termid":"SO:0001172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anticodon_loop","synonyms":[{"name":"anti-codon loop","type":"exact"},{"name":"anticodon loop","type":"exact"}],"termid":"SO:0001173"}


id: PBO:0063781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 6","termid":"PBO:0063781"}


id: FYPO:0005699
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of cytoplasmic microtubules from the spindle pole body (SPB) normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:19001497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal interphase microtubule nucleation","termid":"FYPO:0003326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal interphase microtubule nucleation from spindle pole body","synonyms":[{"name":"normal cytoplasmic microtubule nucleation from SPB during mitotic interphase","type":"exact"},{"name":"normal cytoplasmic microtubule nucleation from spindle pole body during interphase during vegetative growth","type":"exact"},{"name":"normal cytoplasmic microtubule nucleation from spindle pole body during interphase of mitotic cell cycle","type":"exact"},{"name":"normal cytoplasmic microtubule nucleation from spindle pole body during mitotic interphase","type":"exact"},{"name":"normal interphase cytoplasmic microtubule nucleation from spindle pole body","type":"exact"}],"termid":"FYPO:0005699"}


id: PBO:0062328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 66 pseudogene","termid":"PBO:0062328"}


id: MONDO:0012266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any preeclampsia in which the cause of the disease is a mutation in the STOX1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preeclampsia","termid":"MONDO:0005081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preeclampsia/eclampsia 4","secondary_identifiers":["GARD:18392","OMIM:609404","MEDGEN:322874","MESH:C563724","UMLS:C1836255"],"synonyms":[{"name":"PEE4","type":"related"},{"name":"PREECLAMPSIA/eclampsia 4","type":"related"},{"name":"Preeclampsia/eclampsia type 4","type":"exact"},{"name":"STOX1 preeclampsia","type":"exact"},{"name":"preeclampsia caused by mutation in STOX1","type":"exact"},{"name":"preeclampsia/eclampsia 4","type":"exact"}],"termid":"MONDO:0012266","xrefs":{"Monarch":{"xref_id":"0012266"}}}


id: MONDO:0003969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorders related or resulting from use of amphetamines.","definition_xrefs":["MESH:D019969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance abuse","termid":"MONDO:0002491"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amphetamine abuse","secondary_identifiers":["ICD9:305.7","SCTID:84758004","UMLS:C0236807","ICD9:305.70","icd11.foundation:879494155","DOID:670","MEDGEN:66744"],"termid":"MONDO:0003969","xrefs":{"Monarch":{"xref_id":"0003969"}}}


id: PBO:0073947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC20A1 divergent transcript","termid":"PBO:0073947"}


id: GO:0098787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Cleavage of an immature mRNA transcript to produce one or more more mature mRNA transcripts, prior to translation into polypeptide.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA cleavage involved in mRNA processing (obsolete GO:0098787)","termid":"GO:0098787"}


id: PBO:0082690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the heterotetrameric MHF histone-fold complex; in humans the MHF complex interacts with both DNA and Mph1p ortholog FANCM, a Fanconi anemia complementation group protein, to stabilize and remodel blocked replication forks and repair damaged DNA; mhf1 srs2 double mutants are MMS hypersensitive; ortholog of human centromere constitutive-associated network (CCAN) subunit CENP-S, also known as MHF1","termid":"PBO:0082690"}


id: GO:0071253
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a connexin, any of a group of related proteins that assemble to form gap junctions.","definition_xrefs":["PMID:19864490","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"connexin binding","termid":"GO:0071253"}


id: MONDO:0012288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iridogoniodysgenesis and skeletal anomalies","secondary_identifiers":["OMIM:609515","MESH:C535534","UMLS:C1836074","MEDGEN:373009"],"synonyms":[{"name":"iridogoniodysgenesis and skeletal anomalies","type":"exact"}],"termid":"MONDO:0012288","xrefs":{"Monarch":{"xref_id":"0012288"}}}


id: PBO:0061883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPA1 mitochondrial dynamin like GTPase","termid":"PBO:0061883"}


id: MONDO:0006481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the ureter.","direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"ureter cancer","termid":"MONDO:0008627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ureter carcinoma","secondary_identifiers":["UMLS:C0600079","DOID:4939","EFO:1000609","MEDGEN:109002","NCIT:C8993","SCTID:448864006"],"synonyms":[{"name":"carcinoma of the ureter","type":"exact"},{"name":"carcinoma of ureter","type":"exact"},{"name":"ureter cancer","type":"broad"},{"name":"ureter carcinoma","type":"exact"},{"name":"ureteral carcinoma","type":"exact"}],"termid":"MONDO:0006481","xrefs":{"Monarch":{"xref_id":"0006481"}}}


id: PBO:0059074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdenum cofactor synthesis 3","termid":"PBO:0059074"}


id: PBO:0059452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSANTD3-TMEFF1 readthrough","termid":"PBO:0059452"}


id: PBO:0069285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 541, pseudogene","termid":"PBO:0069285"}


id: FYPO:0007546
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear envelope division does not occur. Nuclear envelope division takes place at the end of mitosis; the nuclear envelope undergoes localized breakdown in the nuclear bridge midzone and the ends are sealed and retrieved into the envelopes of the separated daughter nuclei. When nuclear envelope division does not occur, the two DNA masses remain linked by the nuclear bridge, and may coalesce back into a single nucleus.","definition_xrefs":["PomBase:vw","PMID:32848252","PomBase:mah","PMID:32502403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope organization","termid":"FYPO:0000815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished nuclear envelope division","synonyms":[{"name":"abolished NE division","type":"exact"},{"name":"abolished nuclear envelope division during mitotic cell cycle","type":"related"},{"name":"abolished nuclear envelope division during vegetative growth","type":"exact"},{"name":"failed nuclear envelope division","type":"exact"},{"name":"nuclear envelope division abolished","type":"exact"}],"termid":"FYPO:0007546"}


id: PBO:0116810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DTNBP1 antisense RNA 1","termid":"PBO:0116810"}


id: GO:0001528
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A major structural protein of mammalian connective tissues; composed of one third glycine, and also rich in proline, alanine, and valine. Chains are cross-linked together via lysine residues.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete elastin (obsolete GO:0001528)","synonyms":[{"name":"elastin","type":"exact"}],"termid":"GO:0001528"}


id: GO:0061340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of a monopolar intracellular organization or cell growth patterns that regulate the shape of a cell.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of monopolar cell polarity","termid":"GO:0061339"},{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity regulating cell shape","termid":"GO:0071963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment or maintenance of monopolar cell polarity regulating cell shape","termid":"GO:0061340"}


id: GO:0047675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinonate = 2-dehydro-3-deoxy-D-arabinonate + H2O.","definition_xrefs":["EC:4.2.1.5","RHEA:21836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"arabinonate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R03032","MetaCyc:ARABINONATE-DEHYDRATASE-RXN"],"synonyms":[{"name":"D-arabinonate hydro-lyase (2-dehydro-3-deoxy-D-arabinonate-forming)","type":"related"},{"name":"D-arabinonate hydro-lyase activity","type":"related"}],"termid":"GO:0047675"}


id: FYECO:0000382
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in defined medium containing sucrose, salts and water. May be supplemented with a set of amino acids as per the auxotrophic requirements of the strain.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose MM","synonyms":[{"name":"fructose minimal medium","type":"exact"}],"termid":"FYECO:0000382"}


id: FYPO:0003822
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a ribonuclease activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonuclease activity","termid":"FYPO:0003821"},{"relation_name":"is_a","term_name":"decreased nuclease activity","termid":"FYPO:0004253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"decreased ribonuclease activity","synonyms":[{"name":"reduced ribonuclease activity","type":"exact"}],"termid":"FYPO:0003822"}


id: GO:0031801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 4 metabotropic glutamate receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 4 metabotropic glutamate receptor binding","synonyms":[{"name":"type 4 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031801"}


id: PBO:0030628
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_trehalose_carbon_source","termid":"PBO:0030628"}


id: PBO:0000149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA (predicted), possible alternative UTR","termid":"PBO:0000149"}


id: PBO:0090600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial (zinc or iron) ion transmembrane transporter Mmt1","termid":"PBO:0090600"}


id: GO:0061271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a mesenchymal cell establishes apical/basolateral polarity,forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell that will contribute to the shaping of the mesonephric renal vesicle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal to epithelial transition involved in mesonephros morphogenesis","termid":"GO:0061261"},{"relation_name":"is_a","term_name":"mesenchymal to epithelial transition involved in renal vesicle formation","termid":"GO:0072036"},{"relation_name":"part_of","term_name":"mesonephric renal vesicle formation","termid":"GO:0061262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal to epithelial transition involved in mesonephric renal vesicle formation","termid":"GO:0061271"}


id: MONDO:0015168
data:
  {"annotated_genes":["SJAG_02096","SJAG_00773","SJAG_03379","SJAG_01065","SJAG_03847","SJAG_05194","SJAG_00853","SJAG_00875","SJAG_00992","SJAG_03106"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032903"},{"annotations":[88359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030281"},{"annotations":[87838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0975826"},{"annotations":[88366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008822"},{"annotations":[87958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100104"},{"annotations":[88872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010532"},{"annotations":[87801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012750"},{"annotations":[87249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014552"},{"annotations":[87632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014806"},{"annotations":[87631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014807"}]},"cv_name":"mondo","definition":"Arthrogryposis multiplex congenita (AMC) is a group of disorders characterized by congenital limb contractures. It manifests as limitation of movement of multiple limb joints at birth that is usually non-progressive and may include muscle weakness and fibrosis. AMC is always associated with decreased intrauterine fetal movement which leads secondarily to the contractures.","definition_xrefs":["Orphanet:1037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"arthrogryposis syndrome","termid":"MONDO:0015225"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00773":null,"SJAG_00853":null,"SJAG_00875":null,"SJAG_00992":null,"SJAG_01065":null,"SJAG_02096":null,"SJAG_03106":null,"SJAG_03379":null,"SJAG_03847":null,"SJAG_05194":null},"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis multiplex congenita","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080954","icd11.foundation:1930990330","NORD:810","MEDGEN:1830310","MedDRA:10051643","UMLS:C5779613","OMIMPS:617468","GARD:777"],"synonyms":[{"name":"AMC","type":"exact"},{"name":"Arthromyodysplasia congenita","type":"exact"},{"name":"Guerin-Stern syndrome","type":"related"},{"name":"Guérin-Stern syndrome","type":"related"},{"name":"Otto syndrome","type":"related"},{"name":"Rossi syndrome","type":"related"},{"name":"amyoplasia congenita","type":"related"},{"name":"arthrogryposis multiplex congenita","type":"exact"},{"name":"congenital amyoplasia","type":"related"},{"name":"congenital arthromyodysplasia","type":"exact"},{"name":"fibrous ankylosis of multiple joints","type":"related"},{"name":"multiple congenital arthrogryposis","type":"exact"},{"name":"myodysplasia","type":"exact"},{"name":"myodystrophia fetalis deformans","type":"related"},{"name":"rocher-Sheldon syndrome","type":"related"}],"termid":"MONDO:0015168","terms_by_termid":{"MONDO:0008822":null,"MONDO:0010532":null,"MONDO:0012750":null,"MONDO:0014552":null,"MONDO:0014806":null,"MONDO:0014807":null,"MONDO:0030281":null,"MONDO:0032903":null,"MONDO:0100104":null,"MONDO:0975826":null},"xrefs":{"Monarch":{"xref_id":"0015168"}}}


id: PBO:0079191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 20, pseudogene","termid":"PBO:0079191"}


id: PR:P31317
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ornithine carbamoyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine carbamoyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.10","secondary_identifiers":["UniProtKB:P31317"],"synonyms":[{"name":"OTCase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-OTC","type":"exact"},{"name":"ornithine transcarbamylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P31317"}


id: GO:0141128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont superantigen elicits a strong immune response by activating a large number of T cells in a non-specific manner. Unlike conventional antigens, which activate T cells by interacting with specific receptors on the surface of these cells, superantigens can stimulate T cells by binding to regions outside the antigen-binding site. Superantigens can activate a large proportion of T cells, leading to an exaggerated immune response. This excessive activation can result in the release of a large amount of cytokines such as tumor necrosis factor and interleukin-2. The massive cytokine release can lead to an acute toxic shock, causing symptoms such as fever and organ damage.","definition_xrefs":["PMID:12679262","PMID:17427250","PMID:28880920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host immune response","termid":"GO:0052553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated non-specific activation of host T-cells","synonyms":[{"name":"symbiont-mediated non-specific T-cell activation in host","type":"exact"},{"name":"symbiont-mediated nonspecific activation of host T-cells","type":"exact"}],"termid":"GO:0141128"}


id: GO:2000115
data:
  {"annotated_genes":["SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061361"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maintenance of bipolar cell polarity regulating in cell shape.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000100"},{"relation_name":"regulates","term_name":"maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061305"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"regulation of maintenance of bipolar cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000115","terms_by_termid":{"GO:0061361":null}}


id: PBO:0001761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino]imidazole-4-carboxamide isomerase (predicted)","termid":"PBO:0001761"}


id: PBO:0113049
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Class II abasic (AP) endonuclease involved in repair of DNA damage; also possesses 3'-diesterase and PCNA-stiimulated 3' to 5' exonuclease activities; resolves blocked 3' ends that result from removal of misincorporated nucleotides; frays and cleaves 3' DNA termini facilitating 3' DNA-end healing via endonucleolytic cleavage;  homolog of human APEX2 and E. coli exoIII","termid":"PBO:0113049"}


id: PBO:0063035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p21 (RAC1) activated kinase 2","termid":"PBO:0063035"}


id: GO:0098542
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of another organism that act to protect the cell or organism from damage caused by that organism.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"},{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to other organism","secondary_identifiers":["GO:0009814"],"synonyms":[{"name":"defence response incompatible interaction","type":"narrow"},{"name":"defence response to pathogen, incompatible interaction","type":"narrow"},{"name":"defense response, incompatible interaction","type":"narrow"},{"name":"resistance response to pathogen","type":"narrow"}],"termid":"GO:0098542"}


id: MONDO:0030941
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"erythrokeratodermia variabilis","termid":"MONDO:0017851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"erythrokeratodermia variabilis et progressiva 7","secondary_identifiers":["OMIM:619209","MEDGEN:1780408","GARD:18674","UMLS:C5543106"],"synonyms":[{"name":"EKVP7","type":"exact"},{"name":"erythrokeratodermia variabilis et progressiva 7","type":"exact"}],"termid":"MONDO:0030941","xrefs":{"Monarch":{"xref_id":"0030941"}}}


id: PBO:0077323
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 61","termid":"PBO:0077323"}


id: PBO:0077425
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 161B pseudogene 1","termid":"PBO:0077425"}


id: PBO:0027833
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_septum_edging_catabolic_process","termid":"PBO:0027833"}


id: PBO:0065730
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain containing 2B","termid":"PBO:0065730"}


id: GO:0140678
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id: PBO:0065667
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type O","termid":"PBO:0065667"}


id: PR:Q09776
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snu23 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6.U5 small nuclear ribonucleoprotein component snu23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.11c","synonyms":[{"name":"Spom972h-snu23","type":"exact"}],"termid":"PR:Q09776"}


id: MONDO:0005252
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id: PR:O94596
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C622.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.06c","synonyms":[{"name":"Spom972h-SPCC622.06c","type":"exact"}],"termid":"PR:O94596"}


id: PBO:0113471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC2, a regulator of plasma membrane (PM) homeostasis; TORC2 also regulates actin cytoskeletal dynamics during polarized growth and cell wall integrity; contains an N-terminal armadillo repeat region necessary for recruitment to the PM and for anchoring Tor2p and Avo1p at the PM; acts along with Avo1p as a scaffold important for integrity of the TORC2 complex; involved in sphingolipid metabolism; contains a RasGEFN domain","termid":"PBO:0113471"}


id: PR:O13945
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase domain-containing protein ppk9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.02","synonyms":[{"name":"Spom972h-ppk9","type":"exact"}],"termid":"PR:O13945"}


id: GO:0005681
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id: PBO:0088798
data:
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