# terms

id: GO:0032323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lipoate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid catabolic process","termid":"GO:0009062"},{"relation_name":"is_a","term_name":"lipoate metabolic process","termid":"GO:0009106"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lipoate catabolic process","synonyms":[{"name":"lipoic acid breakdown","type":"exact"},{"name":"lipoic acid catabolism","type":"exact"},{"name":"lipoic acid degradation","type":"exact"}],"termid":"GO:0032323"}


id: MOD:00550
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EAPTA d0","synonyms":[{"name":"EAPTA d0","type":"related"},{"name":"EQAT","type":"related"}],"termid":"MOD:00550"}


id: PBO:0091462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3 H4 heterotetramer chaperone Rtt106","termid":"PBO:0091462"}


id: PBO:0027496
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_mevastatin","termid":"PBO:0027496"}


id: SO:0000316
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A contiguous sequence which begins with, and includes, a start codon and ends with, and includes, a stop codon.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS","synonyms":[{"name":"INSDC_feature:CDS","type":"exact"},{"name":"coding sequence","type":"exact"},{"name":"coding_sequence","type":"exact"}],"termid":"SO:0000316"}


id: MOD:01987
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-serine residue by a thioether bond to form 2-(S-L-cysteinyl)-D-serine.","definition_xrefs":["PubMed:21786372","RESID:AA0624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"},{"relation_name":"is_a","term_name":"crosslinked D-serine residue","termid":"MOD:02064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"2-(L-cystein-S-yl)-D-serine","synonyms":[{"name":"(2R,5S)-2,5-diamino-5-carboxy-6-hydroxy-4-thiahexanoic acid","type":"exact"},{"name":"(2S)-2-amino-2-([(2R)-2-amino-2-carboxyethyl]sulfanyl)-3-hydroxypropanoic acid","type":"exact"}],"termid":"MOD:01987"}


id: MONDO:1010438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cardiomyopathy that occurs in salmonids.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy, non-human animal","termid":"MONDO:1010010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy, salmonids","secondary_identifiers":["OMIA:000160-8015"],"termid":"MONDO:1010438","xrefs":{"Monarch":{"xref_id":"1010438"}}}


id: PBO:0088110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar amino acid transporter; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters","termid":"PBO:0088110"}


id: MONDO:0032879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megabladder, congenital","secondary_identifiers":["DOID:0112014","MEDGEN:1684806","OMIM:618719","UMLS:C5231472"],"synonyms":[{"name":"MEGABLADDER, CONGENITAL","type":"related"},{"name":"MGBL","type":"related"}],"termid":"MONDO:0032879","xrefs":{"Monarch":{"xref_id":"0032879"}}}


id: PBO:0050691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 18","termid":"PBO:0050691"}


id: PBO:0006167
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_part","termid":"PBO:0006167"}


id: PBO:0043720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B2","termid":"PBO:0043720"}


id: MONDO:0000703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of microscopic colitis of unknown etiology. It is characterized by the presence of collagen deposits in the lamina propria of the colonic mucosa. Patients present with chronic watery diarrhea. Colonoscopy reveals normal-appearing mucosa. The diagnosis is made with the microscopic examination of the colonic biopsy samples.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microscopic colitis","termid":"MONDO:0000702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"collagenous colitis","secondary_identifiers":["UMLS:C0238067","ICD10CM:K52.831","DOID:0060183","EFO:1001293","icd11.foundation:1322041450","MedDRA:10048928","Orphanet:36205","MESH:D046729","MEDGEN:65945","ICD9:558.9","NCIT:C27021","SCTID:19311003"],"termid":"MONDO:0000703","xrefs":{"Monarch":{"xref_id":"0000703"}}}


id: MONDO:0011417
data:
  {"annotated_genes":["SJAG_02117"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87332],"is_not":false,"summary":null,"term":"MONDO:0011417"}]},"cv_name":"mondo","definition":"Type 3 hemochromatosis is a form of rare hereditary hemochromatosis (HH), a group of diseases characterized by excessive tissue iron deposition of genetic origin.","definition_xrefs":["Orphanet:225123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hemochromatosis","termid":"MONDO:0006507"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02117":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hemochromatosis type 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:604250","UMLS:C1858664","DOID:0111030","MEDGEN:388114","MESH:C537248","SCTID:719974003","GARD:10093"],"synonyms":[{"name":"HFE3","type":"exact"},{"name":"TFR2 hereditary hemochromatosis","type":"exact"},{"name":"TFR2-related hemochromatosis","type":"exact"},{"name":"hemochromatosis due to defect in transferrin receptor 2","type":"exact"},{"name":"hemochromatosis type 3","type":"exact"},{"name":"hemochromatosis, type 3","type":"related"},{"name":"hereditary hemochromatosis caused by mutation in TFR2","type":"exact"}],"termid":"MONDO:0011417","terms_by_termid":{"MONDO:0011417":null},"xrefs":{"Monarch":{"xref_id":"0011417"}}}


id: MONDO:0859137
data:
  {"annotated_genes":["SJAG_01952"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88409],"is_not":false,"summary":null,"term":"MONDO:0859137"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01952":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with spasticity, cataracts, and cerebellar hypoplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1781371","OMIM:619286","UMLS:C5543306"],"termid":"MONDO:0859137","terms_by_termid":{"MONDO:0859137":null},"xrefs":{"Monarch":{"xref_id":"0859137"}}}


id: GO:0044559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism alters or subverts the activity of a voltage-gated potassium channel in another organism via the action of a venom.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of ion channel activity","termid":"GO:0044560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated perturbation of voltage-gated potassium channel activity","synonyms":[{"name":"envenomation resulting in modulation of voltage-gated potassium channel activity in another organism","type":"exact"},{"name":"envenomation resulting in modulation of voltage-gated potassium channel activity in other organism","type":"exact"}],"termid":"GO:0044559"}


id: GO:0034255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving urea.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of nitrogen cycle metabolic process","termid":"GO:1903314"},{"relation_name":"regulates","term_name":"urea metabolic process","termid":"GO:0019627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0071941"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0071941","GO:0008150"],"is_obsolete":false,"name":"regulation of urea metabolic process","synonyms":[{"name":"regulation of urea metabolism","type":"exact"}],"termid":"GO:0034255"}


id: PR:Q12701
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A STE20/SPS1-related proline-alanine-rich protein kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ksg1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.15c","secondary_identifiers":["UniProtKB:Q12701"],"synonyms":[{"name":"Spom972h-STK39","type":"exact"}],"termid":"PR:Q12701"}


id: GO:0006364
data:
  {"annotated_genes":["SJAG_04062","SJAG_04900","SJAG_02374","SJAG_01811","SJAG_00616","SJAG_04330","SJAG_04838","SJAG_03332","SJAG_03234","SJAG_00772","SJAG_00749","SJAG_02608","SJAG_00986","SJAG_03654","SJAG_04424","SJAG_05276","SJAG_03125","SJAG_00689","SJAG_04081","SJAG_04289","SJAG_03755","SJAG_01234","SJAG_00744","SJAG_04252","SJAG_03479","SJAG_02275","SJAG_03954","SJAG_01420","SJAG_02644","SJAG_04339","SJAG_03413","SJAG_03846","SJAG_04084","SJAG_00538","SJAG_00410","SJAG_04519","SJAG_05186","SJAG_04006","SJAG_04492","SJAG_00537","SJAG_00657","SJAG_05253","SJAG_01609","SJAG_04979","SJAG_00259","SJAG_00945","SJAG_02821","SJAG_01250","SJAG_00854","SJAG_04033","SJAG_02020","SJAG_00813","SJAG_00294","SJAG_00838","SJAG_03410","SJAG_00069","SJAG_00955","SJAG_04029","SJAG_01821","SJAG_04188","SJAG_01323","SJAG_00597","SJAG_04433","SJAG_04687","SJAG_00943","SJAG_02749","SJAG_01623","SJAG_03872","SJAG_01056","SJAG_02300","SJAG_04004","SJAG_03077","SJAG_03952","SJAG_03341","SJAG_04153","SJAG_01182","SJAG_02894","SJAG_01764","SJAG_02681","SJAG_00468","SJAG_03425","SJAG_00311","SJAG_04890","SJAG_03016","SJAG_03796","SJAG_02427","SJAG_04369","SJAG_05190","SJAG_03179","SJAG_02829","SJAG_03028","SJAG_00253","SJAG_02417","SJAG_04108","SJAG_02830","SJAG_04767","SJAG_02250","SJAG_04974","SJAG_02530","SJAG_02287","SJAG_00583","SJAG_02911","SJAG_01618","SJAG_05018","SJAG_01958","SJAG_03745","SJAG_00503","SJAG_00566","SJAG_02377","SJAG_03466","SJAG_00323","SJAG_04224","SJAG_04527","SJAG_03383","SJAG_01606","SJAG_02046","SJAG_03551","SJAG_03156","SJAG_02547","SJAG_03713","SJAG_04818","SJAG_02024","SJAG_01153","SJAG_00950","SJAG_00245","SJAG_02508","SJAG_02372","SJAG_01604","SJAG_02358","SJAG_01172","SJAG_00882","SJAG_04908","SJAG_00722","SJAG_00841","SJAG_00879","SJAG_03730","SJAG_04650","SJAG_01369","SJAG_02382","SJAG_00344","SJAG_03572","SJAG_01521","SJAG_00572","SJAG_03008","SJAG_04754","SJAG_02662","SJAG_01907","SJAG_03789","SJAG_02156","SJAG_01818","SJAG_06613","SJAG_01366","SJAG_04998","SJAG_01169","SJAG_02256","SJAG_01581","SJAG_02499","SJAG_00798","SJAG_01650","SJAG_02281","SJAG_01347","SJAG_00897","SJAG_02553","SJAG_04669","SJAG_01877","SJAG_02371","SJAG_01476","SJAG_03857","SJAG_03539","SJAG_02340","SJAG_03458","SJAG_04174","SJAG_05223","SJAG_01272","SJAG_01551","SJAG_02585","SJAG_04916","SJAG_02861","SJAG_01431","SJAG_03422","SJAG_02879","SJAG_03569","SJAG_04746","SJAG_05187","SJAG_02993","SJAG_00401","SJAG_04524","SJAG_01674","SJAG_04582","SJAG_01191","SJAG_00752","SJAG_02025","SJAG_04069","SJAG_00562","SJAG_03289","SJAG_03252","SJAG_00081","SJAG_04321","SJAG_16455","SJAG_02702","SJAG_03877","SJAG_03773","SJAG_00083","SJAG_03617","SJAG_00965","SJAG_04824","SJAG_03012","SJAG_02350"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58029,58179,59109,62195,63496,63497,69483,69827,71082,71519,73112,73433,74168,75314,76062,76230,76358,76466,77211,77309,77760,77844,78466,78650,80419,81512,81670,81787,81995,90691,92667,92965,93566,94248,97543,98162,99022,99210,102834,104877,105283,105581,106459,108875,109068,109397,110418,110570,112792,112954,113043,114429,114672,114912,115060,116816,117712,118368],"is_not":false,"summary":null,"term":"GO:0006364"},{"annotations":[73285,93580,106048,96859],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0000448"},{"annotations":[79740,74672,72105],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000480"},{"annotations":[76292,72980,107606,116201,115482,106500,105061,80078,120624,96604,107607,73667,117307,106718,60813,98411,74676,117395,72111,110975,98701],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000447"},{"annotations":[78637,76175,77633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000479"},{"annotations":[76293],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0000461"},{"annotations":[79739,72104,74671,110976],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000472"},{"annotations":[77289,108181,57307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000455"},{"annotations":[91848,81239,79464,73378,100856,117445,72383,73083,117885,109412,74205,104010,108421,76844,99151],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0000467"},{"annotations":[109413],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0000465"},{"annotations":[102962,73408,80835,81269,76989,81150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000460"},{"annotations":[80513,63769,79994,62173,99891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000466"},{"annotations":[80164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000481"},{"annotations":[81151,76990,77171,80723,81270,73409,74215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000470"},{"annotations":[79993,72124,74056,99892,75816,101971,75102,77014,80512,77686,74082,75266,62434,99859,81534,72994,76608,75446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000463"},{"annotations":[93928,103611,81769,78179,96657,103856,115535,75539,90552,95578,75150,81113,71784,98766,102519,59667,77655,112548,75361,76386,74580,93195,113983,100432,102391,97625,77170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030490"},{"annotations":[76958,74582,67450,74830,62814,93109,77003,65416,111065,116723,72552,66325,79861,76968,98948,73348,63574,81039,107354,73479,78838,89680,63392,80257,91107,73311,74670,76179,81892,75042,82177,77637,81543,78120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000462"},{"annotations":[77168,79813],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2000234"},{"annotations":[81915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070476"},{"annotations":[97299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000967"},{"annotations":[74142],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:1904812"},{"annotations":[77390,81384,80044,80446,80722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070475"},{"annotations":[64967,65335,59889,67040,76898,81201,80511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031167"},{"annotations":[82080,79394,59463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031118"},{"annotations":[112175,100709,113333,61617,96012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000452"},{"annotations":[76269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000454"}]},"cv_name":"biological_process","definition":"Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"},{"relation_name":"is_a","term_name":"rRNA metabolic process","termid":"GO:0016072"},{"relation_name":"part_of","term_name":"ribosome 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id: PBO:0013092
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. japonicus gtb1","termid":"PBO:0013092"}


id: PBO:0074201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 11","termid":"PBO:0074201"}


id: GO:0009661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chromoplast. A chromoplast is a plastid containing pigments other than chlorophyll, usually yellow and orange carotenoid pigments.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid organization","termid":"GO:0009657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chromoplast organization","synonyms":[{"name":"chromoplast organisation","type":"exact"},{"name":"chromoplast organization and biogenesis","type":"related"}],"termid":"GO:0009661"}


id: MONDO:0020010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A infectious disease that involves the nervous system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious disorder of the nervous system","secondary_identifiers":["Orphanet:98010","ICD9:349.89","NCIT:C27590","UMLS:C0597039","MEDGEN:108926","SCTID:128116006"],"synonyms":[{"name":"nervous system infectious disease","type":"exact"},{"name":"nervous system infectious disorder","type":"exact"}],"termid":"MONDO:0020010","xrefs":{"Monarch":{"xref_id":"0020010"}}}


id: MONDO:0019953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cystic malformation of the posterior fossa","termid":"MONDO:0020134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"mega-cisterna magna","secondary_identifiers":["GARD:19355","MEDGEN:344031","Orphanet:97252","UMLS:C1853377"],"termid":"MONDO:0019953","xrefs":{"Monarch":{"xref_id":"0019953"}}}


id: PBO:0004716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L32 (predicted)","termid":"PBO:0004716"}


id: PBO:0080100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP6 small subunit processome component","termid":"PBO:0080100"}


id: PBO:0039488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A11, pseudogene","termid":"PBO:0039488"}


id: PBO:0071857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 52","termid":"PBO:0071857"}


id: GO:0036513
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that functions in the retrotranslocation step of ERAD (ER-associated protein degradation), and includes at its core Derlin-1 oligomers forming a retrotranslocation channel.","definition_xrefs":["PMID:15215856","GOC:PARL","GOC:bf","PMID:16186510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005789","GO:0005783","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Derlin-1 retrotranslocation complex","synonyms":[{"name":"Derlin-1 complex","type":"exact"},{"name":"Derlin-1 protein dislocation complex","type":"exact"},{"name":"Derlin-1 retro-translocation complex","type":"exact"},{"name":"Derlin-1 retrotranslocon","type":"exact"},{"name":"ERAD protein dislocation complex","type":"exact"}],"termid":"GO:0036513"}


id: PBO:0046046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit D","termid":"PBO:0046046"}


id: GO:0030373
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a high molecular weight B cell growth factor and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["PMID:2681271","GOC:signaling","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"high molecular weight B cell growth factor receptor activity","synonyms":[{"name":"HMW-BCGF receptor","type":"exact"},{"name":"high molecular weight B lymphocyte growth factor receptor activity","type":"exact"},{"name":"high molecular weight B-cell growth factor receptor activity","type":"exact"},{"name":"high molecular weight B-lymphocyte growth factor receptor activity","type":"exact"}],"termid":"GO:0030373"}


id: GO:0046829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the movement of RNA from the cytoplasm into the nucleus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound transport","termid":"GO:0032240"},{"relation_name":"is_a","term_name":"negative regulation of nucleocytoplasmic transport","termid":"GO:0046823"},{"relation_name":"is_a","term_name":"regulation of RNA import into nucleus","termid":"GO:0046828"},{"relation_name":"negatively_regulates","term_name":"RNA import into nucleus","termid":"GO:0006404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006913","GO:0006810"],"is_obsolete":false,"name":"negative regulation of RNA import into nucleus","synonyms":[{"name":"down regulation of RNA import into nucleus","type":"exact"},{"name":"down-regulation of RNA import into nucleus","type":"exact"},{"name":"downregulation of RNA import into nucleus","type":"exact"},{"name":"inhibition of RNA import into nucleus","type":"narrow"},{"name":"negative regulation of RNA import into cell nucleus","type":"exact"},{"name":"negative regulation of RNA transport from cytoplasm to nucleus","type":"exact"},{"name":"negative regulation of RNA-nucleus import","type":"exact"}],"termid":"GO:0046829"}


id: PBO:0084234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hypothetical protein; deletion of locus affects telomere length","termid":"PBO:0084234"}


id: PBO:0004939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase Spi1","termid":"PBO:0004939"}


id: MONDO:1011666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-specific digestive disorder, non-human animal","secondary_identifiers":["OMIA:001768"],"termid":"MONDO:1011666","xrefs":{"Monarch":{"xref_id":"1011666"}}}


id: PBO:0017603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structure-specific endonuclease catalytic subunit Slx1","termid":"PBO:0017603"}


id: PBO:0001028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex-associated motor subunit Pam17 (predicted)","termid":"PBO:0001028"}


id: MONDO:0016643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of rare bone development disorders characterized by an array of abnormalities affecting the eyes, forehead, and nose, and linked to midfacial dysraphia. The clinical picture is highly variable, but the major findings include hypertelorism, a broad nasal root, a large and bifid nasal tip, and widow's peak. Occasionally, abnormalities can include accessory nasal tags, cleft lip, ocular abnormalities (coloboma, cataract, microphthalmia), conductive hearing loss, basal encephalocele and/or agenesis of the corpus callosum. Intellectual deficit is rare and more likely to occur in cases where hypertelorism is severe or where there is extra-cranial involvement.","definition_xrefs":["Orphanet:250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"frontonasal dysplasia","secondary_identifiers":["MESH:C538065","icd11.foundation:782645776","GARD:2392","NORD:1165","DOID:0081044","UMLS:C1876203","MEDGEN:406292","OMIMPS:136760","SCTID:86610004"],"synonyms":[{"name":"FND1","type":"narrow"},{"name":"frontonasal dysplasia 1","type":"narrow"},{"name":"median cleft face syndrome","type":"exact"},{"name":"median cleft syndrome","type":"related"}],"termid":"MONDO:0016643","xrefs":{"Monarch":{"xref_id":"0016643"}}}


id: GO:0019430
data:
  {"annotated_genes":["SJAG_01734","SJAG_05181","SJAG_03653","SJAG_04788","SJAG_04399","SJAG_00668","SJAG_03303","SJAG_04632","SJAG_04403"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58381,61559,66220,70435,75975,90848,91273,95018,101189],"is_not":false,"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process, acting at the cellular level, involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"superoxide metabolic process","termid":"GO:0006801"},{"relation_name":"is_a","term_name":"cellular oxidant detoxification","termid":"GO:0098869"},{"relation_name":"part_of","term_name":"cellular response to superoxide","termid":"GO:0071451"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00668":null,"SJAG_01734":null,"SJAG_03303":null,"SJAG_03653":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"removal of superoxide radicals","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["MetaCyc:DETOX1-PWY"],"synonyms":[{"name":"cellular detoxification of superoxide radicals","type":"exact"},{"name":"removal of O2-","type":"exact"},{"name":"removal of oxygen free radicals","type":"exact"}],"termid":"GO:0019430","terms_by_termid":{"GO:0019430":null}}


id: GO:0006255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP reduction (obsolete GO:0006255)","synonyms":[{"name":"UDP reduction","type":"exact"}],"termid":"GO:0006255"}


id: PR:O74797
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2D10.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0587 protein C2D10.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.03c","synonyms":[{"name":"Spom972h-SPBC2D10.03c","type":"exact"}],"termid":"PR:O74797"}


id: PBO:0027018
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomeric_repeat_sequence","termid":"PBO:0027018"}


id: PBO:0117157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 34, ubiquitin conjugating enzyme","termid":"PBO:0117157"}


id: MONDO:0012428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kyphoscoliosis 1","secondary_identifiers":["MESH:C565711","MEDGEN:347550","OMIM:610170","UMLS:C1857795"],"synonyms":[{"name":"KYPSC1","type":"exact"},{"name":"kyphoscoliosis 1","type":"exact"}],"termid":"MONDO:0012428","xrefs":{"Monarch":{"xref_id":"0012428"}}}


id: PR:O94259
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- utp16 gene.","definition_xrefs":["UniProtKB:O94259","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.10c","synonyms":[{"name":"Spom972h-utp16","type":"exact"},{"name":"U3 snoRNA-associated protein 16 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94259"}


id: MONDO:0005200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An dilated cardiomyopathy caused by infection with Viruses.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dilated cardiomyopathy","termid":"MONDO:0005021"},{"relation_name":"is_a","term_name":"post-viral disorder","termid":"MONDO:0021674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"viral dilated cardiomyopathy","secondary_identifiers":["SCTID:30496006","Wikipedia:Viral_cardiomyopathy","EFO:0002629","UMLS:C0264797","MEDGEN:538852"],"synonyms":[{"name":"Viruses caused dilated cardiomyopathy","type":"exact"},{"name":"Viruses dilated cardiomyopathy","type":"exact"}],"termid":"MONDO:0005200","xrefs":{"Monarch":{"xref_id":"0005200"}}}


id: GO:0051385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mineralocorticoid stimulus. Mineralocorticoids are hormonal C21 corticosteroids synthesized from cholesterol and characterized by their similarity to aldosterone. Mineralocorticoids act primarily on water and electrolyte balance.","definition_xrefs":["GOC:ai","PMID:9884123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to corticosteroid","termid":"GO:0031960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mineralocorticoid","synonyms":[{"name":"response to mineralocorticoid stimulus","type":"exact"}],"termid":"GO:0051385"}


id: MONDO:0859570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Braddock-Carey syndrome","termid":"MONDO:0031646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"braddock-carey syndrome 2","secondary_identifiers":["OMIM:619981","UMLS:C5774189","MEDGEN:1823962"],"termid":"MONDO:0859570","xrefs":{"Monarch":{"xref_id":"0859570"}}}


id: PBO:0050164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 20","termid":"PBO:0050164"}


id: PBO:0001856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aconitate hydratase (predicted)","termid":"PBO:0001856"}


id: GO:0032201
data:
  {"annotated_genes":["SJAG_03624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99096],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0032215"}]},"cv_name":"biological_process","definition":"The process in which telomeric DNA is synthesized semi-conservatively by the conventional replication machinery and telomeric accessory factors as part of cell cycle DNA replication.","definition_xrefs":["PMID:16598261","GOC:BHF","GOC:rl","GOC:vw","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0006259","GO:0006260","GO:0032200"],"is_obsolete":false,"name":"telomere maintenance via semi-conservative replication","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-174417"],"synonyms":[{"name":"equal telomere replication","type":"related"},{"name":"telomeric fork progression","type":"narrow"},{"name":"telomeric replication fork progression","type":"narrow"}],"termid":"GO:0032201","terms_by_termid":{"GO:0032215":null}}


id: PBO:0073463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant protein D","termid":"PBO:0073463"}


id: PBO:0062066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 3 subfamily A member 4 pseudogene","termid":"PBO:0062066"}


id: internal:feature
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature","termid":"internal:feature"}


id: PBO:0049821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDAC11 antisense RNA 1","termid":"PBO:0049821"}


id: PR:Q2EEM0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27E2.12 gene.","definition_xrefs":["UniProtKB:Q2EEM0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C27E2.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.12","synonyms":[{"name":"Spom972h-SPAC27E2.12","type":"exact"}],"termid":"PR:Q2EEM0"}


id: FYPO:0007952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is normal (i.e. indistinguishable from wild type), during stationary phase. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level","termid":"FYPO:0004083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein level during stationary phase","termid":"FYPO:0007952"}


id: PBO:0042633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 8 pseudogene","termid":"PBO:0042633"}


id: FYPO:0008300
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed during prophase of the first division of the meiotic cell cycle in which a protein that is normally localized to discrete regions in the nucleus, visible as foci or dots by microscopy, is abnormally localized.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal punctate nuclear protein localization during meiotic prophase I","termid":"FYPO:0008300"}


id: GO:0072330
data:
  {"annotated_genes":["SJAG_02717","SJAG_04007","SJAG_04404","SJAG_04674","SJAG_00099","SJAG_02408","SJAG_00673","SJAG_03553","SJAG_02007","SJAG_03198","SJAG_04107","SJAG_01238","SJAG_05200","SJAG_03130","SJAG_03313","SJAG_03180","SJAG_03943","SJAG_03679","SJAG_04481","SJAG_01935","SJAG_00630","SJAG_03972","SJAG_01271","SJAG_01458","SJAG_01300","SJAG_02106","SJAG_00305","SJAG_01946","SJAG_03526","SJAG_04972","SJAG_03786","SJAG_02885","SJAG_02769","SJAG_01356","SJAG_00902","SJAG_02988"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008153"},{"annotations":[70140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019413"},{"annotations":[81115,77954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"},{"annotations":[69079,93319,71977,96909,79139,65080,110683,109433,103983,78712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006633"},{"annotations":[81527,75438,113307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030497"},{"annotations":[93826,79508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034625"},{"annotations":[93827,79512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019367"},{"annotations":[59613,61425,60993,63263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019249"},{"annotations":[76785,99075,99777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009107"},{"annotations":[74023,106257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042759"},{"annotations":[72604],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045717"},{"annotations":[99600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900535"},{"annotations":[79442,74129,64025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[71995,76972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006636"},{"annotations":[93830,105403,74383,79510,75435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of monocarboxylic acids, any organic acid containing one carboxyl (-COOH) group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00099":null,"SJAG_00305":null,"SJAG_00630":null,"SJAG_00673":null,"SJAG_00902":null,"SJAG_01238":null,"SJAG_01271":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_01458":null,"SJAG_01935":null,"SJAG_01946":null,"SJAG_02007":null,"SJAG_02106":null,"SJAG_02408":null,"SJAG_02717":null,"SJAG_02769":null,"SJAG_02885":null,"SJAG_02988":null,"SJAG_03130":null,"SJAG_03180":null,"SJAG_03198":null,"SJAG_03313":null,"SJAG_03526":null,"SJAG_03553":null,"SJAG_03679":null,"SJAG_03786":null,"SJAG_03943":null,"SJAG_03972":null,"SJAG_04007":null,"SJAG_04107":null,"SJAG_04404":null,"SJAG_04481":null,"SJAG_04674":null,"SJAG_04972":null,"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"monocarboxylic acid biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"monocarboxylic acid anabolism","type":"exact"},{"name":"monocarboxylic acid biosynthesis","type":"exact"},{"name":"monocarboxylic acid formation","type":"exact"},{"name":"monocarboxylic acid synthesis","type":"exact"}],"termid":"GO:0072330","terms_by_termid":{"GO:0006633":null,"GO:0006636":null,"GO:0008153":null,"GO:0009102":null,"GO:0009107":null,"GO:0015940":null,"GO:0019249":null,"GO:0019367":null,"GO:0019413":null,"GO:0030497":null,"GO:0034625":null,"GO:0042759":null,"GO:0042761":null,"GO:0045717":null,"GO:1900535":null}}


id: PBO:0079596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2E1 antisense RNA 1","termid":"PBO:0079596"}


id: GO:1901491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lymphangiogenesis.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:20133819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of lymphangiogenesis","termid":"GO:1901490"},{"relation_name":"negatively_regulates","term_name":"lymphangiogenesis","termid":"GO:0001946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphangiogenesis","synonyms":[{"name":"down regulation of lymph vessel formation","type":"exact"},{"name":"down regulation of lymphangiogenesis","type":"exact"},{"name":"down-regulation of lymph vessel formation","type":"exact"},{"name":"down-regulation of lymphangiogenesis","type":"exact"},{"name":"downregulation of lymph vessel formation","type":"exact"},{"name":"downregulation of lymphangiogenesis","type":"exact"},{"name":"inhibition of lymph vessel formation","type":"narrow"},{"name":"inhibition of lymphangiogenesis","type":"narrow"},{"name":"negative regulation of lymph vessel formation","type":"exact"}],"termid":"GO:1901491"}


id: GO:0005723
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small, compact region of heterochromatin located in the middle of the polytene chromosome chromocenter, which undergoes little or no replication during polytenization.","definition_xrefs":["PMID:8878678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericentric heterochromatin","termid":"GO:0005721"},{"relation_name":"part_of","term_name":"polytene chromosome chromocenter","termid":"GO:0005701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"alpha-heterochromatin","termid":"GO:0005723"}


id: GO:0051907
data:
  {"annotated_genes":["SJAG_05256"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97437],"is_not":false,"summary":null,"term":"GO:0051907"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-(hydroxymethyl)glutathione = formaldehyde + glutathione.","definition_xrefs":["RHEA:22488","EC:4.4.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"S-(hydroxymethyl)glutathione synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-2961","KEGG_REACTION:R06982","UM-BBD_reactionID:r1145"],"synonyms":[{"name":"Gfa","type":"related"},{"name":"S-(hydroxymethyl)glutathione formaldehyde-lyase (glutathione-forming)","type":"related"},{"name":"S-(hydroxymethyl)glutathione formaldehyde-lyase activity","type":"related"},{"name":"glutathione-dependent formaldehyde-activating enzyme activity","type":"exact"}],"termid":"GO:0051907","terms_by_termid":{"GO:0051907":null}}


id: GO:0046022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter during mitotic cell cycle (obsolete GO:0046022)","synonyms":[{"name":"activation of transcription from RNA polymerase II promoter during mitosis","type":"narrow"},{"name":"mitotic activation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter during mitosis","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter, mitotic","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter during mitosis","type":"narrow"},{"name":"up regulation of transcription from RNA polymerase II promoter during mitosis","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter during mitosis","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter during mitosis","type":"exact"}],"termid":"GO:0046022"}


id: GO:0102837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:2-2-16:1-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-16:1-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:2-2-16:1-monogalactosyldiacylglycerol desaturase activity (obsolete GO:0102837)","termid":"GO:0102837"}


id: GO:0098543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from another organism is received and converted into a molecular signal.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"},{"relation_name":"is_a","term_name":"detection of external biotic stimulus","termid":"GO:0098581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of other organism","secondary_identifiers":["GO:0051824"],"synonyms":[{"name":"recognition of other organism during symbiotic interaction","type":"narrow"},{"name":"recognition of other organism involved in symbiotic interaction","type":"narrow"}],"termid":"GO:0098543"}


id: GO:0102246
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aminodeoxyfutalosinate + H2O = dehypoxanthine futalosine + adenine.","definition_xrefs":["EC:3.2.2.30","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"6-amino-6-deoxyfutalosine hydrolase activity","secondary_identifiers":["MetaCyc:RXN-12346","RHEA:33079"],"termid":"GO:0102246"}


id: PBO:0086635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YGL036W is not an essential gene","termid":"PBO:0086635"}


id: FYPO:0007700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a vegetative cell is inviable and an abnormally low volume, and in which the G2/M transition of the mitotic cell cycle begins earlier than normal.","definition_xrefs":["PMID:1706223","PomBase:mah","PMID:33683349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable small vegetative cell","termid":"FYPO:0000951"},{"relation_name":"is_a","term_name":"premature mitotic G2/M phase transition","termid":"FYPO:0002516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000004","FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0000005","FYPO:0005447"],"is_obsolete":false,"name":"inviable small vegetative cell with premature mitotic G2/M phase transition","synonyms":[{"name":"inviable small cell with premature mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"inviable small vegetative cell with advanced mitotic G2 phase progression","type":"related"},{"name":"inviable small vegetative cell with advanced mitotic G2/M phase transition","type":"exact"},{"name":"inviable small vegetative cell with advanced mitotic G2/M transition","type":"exact"},{"name":"inviable small vegetative cell with mitotic G2 advance","type":"exact"},{"name":"inviable small vegetative cell with mitotic G2/M transition advance","type":"exact"},{"name":"inviable small vegetative cell with mitotic cell cycle advance at G2/M transition","type":"exact"},{"name":"inviable small vegetative cell with premature cell cycle progression through mitotic G2/M phase transition","type":"exact"},{"name":"inviable small vegetative cell with premature mitotic G2/M phase transition during mitotic cell cycle","type":"related"},{"name":"inviable small vegetative cell with premature mitotic G2/M transition","type":"exact"},{"name":"mitotic catastrophe","type":"related"}],"termid":"FYPO:0007700"}


id: PBO:0013837
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Choline Transporter-Like","termid":"PBO:0013837"}


id: GO:0018006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glucuronylation of the N-terminal amino acid of proteins.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein glucuronylation","termid":"GO:0018321"},{"relation_name":"is_a","term_name":"N-terminal protein amino acid modification","termid":"GO:0031365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"N-terminal protein amino acid glucuronylation","termid":"GO:0018006"}


id: PBO:0052884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-7","termid":"PBO:0052884"}


id: MONDO:0007657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"giant neutrophil leukocytes","secondary_identifiers":["MEDGEN:330754","OMIM:137500","UMLS:C1842039"],"synonyms":[{"name":"giant neutrophil leukocytes","type":"exact"}],"termid":"MONDO:0007657","xrefs":{"Monarch":{"xref_id":"0007657"}}}


id: SO:0001329
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N2_2prime_O_dimethylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2_2_prime_O_dimethylguanosine","secondary_identifiers":["RNAMOD:034"],"synonyms":[{"name":"N2 2 prime O dimethylguanosine","type":"exact"},{"name":"N2,2'-O-dimethylguanosine","type":"exact"},{"name":"m2Gm","type":"exact"}],"termid":"SO:0001329"}


id: PBO:0052612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRAB box domain containing 4","termid":"PBO:0052612"}


id: GO:0141032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host actin cytoskeleton by reorganizing the actin filaments, in a way that keeps the total filementous actin remains approximately constant. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:31130928","PMID:22212282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host actin cytoskeleton","termid":"GO:0141027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host actin cytoskeleton via actin filament reorganization","synonyms":[{"name":"perturbation by symbiont of host actin cytoskeleton via actin filament rearrangement","type":"exact"},{"name":"perturbation by symbiont of host actin cytoskeleton via actin filament reorganization","type":"exact"}],"termid":"GO:0141032"}


id: PBO:0000016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-target_is","termid":"PBO:0000016"}


id: GO:1900944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of isoprene metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"regulates","term_name":"isoprene metabolic process","termid":"GO:0043611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of isoprene metabolic process","synonyms":[{"name":"regulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"regulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"regulation of hemiterpene metabolic process","type":"exact"},{"name":"regulation of hemiterpene metabolism","type":"exact"},{"name":"regulation of isoprene metabolism","type":"exact"}],"termid":"GO:1900944"}


id: GO:0003802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of one Arg-Ile bond in factor X to form factor Xa, and on factor IX to form factor IXa beta.","definition_xrefs":["PMID:12496253"],"gene_count":0,"genotype_count":0,"name":"obsolete coagulation factor VIIa activity (obsolete GO:0003802)","synonyms":[{"name":"activated blood coagulation factor VII","type":"related"},{"name":"blood coagulation factor VII activity","type":"exact"},{"name":"blood-coagulation factor VIIa","type":"related"},{"name":"coagulation factor VIIa activity","type":"exact"}],"termid":"GO:0003802"}


id: PR:Q9UTS6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dlc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTS6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Tctex-type (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.08","synonyms":[{"name":"Spom972h-dlc1","type":"exact"},{"name":"TCTEX-1 protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTS6"}


id: PBO:0088252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial mRNA processing protein Cox24/Pet20","termid":"PBO:0088252"}


id: PBO:0084012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycogen synthase; expression induced by glucose limitation, nitrogen starvation, environmental stress, and entry into stationary phase; GSY1 has a paralog, GSY2, that arose from the whole genome duplication; relocalizes from nucleus to cytoplasmic foci upon DNA replication stress","termid":"PBO:0084012"}


id: PBO:0052190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNMA1 antisense RNA 3","termid":"PBO:0052190"}


id: MONDO:0014156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial atrial fibrillation in which the cause of the disease is a mutation in the SCN2B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 14","secondary_identifiers":["OMIM:615378","GARD:15955","MEDGEN:815642","UMLS:C3809312"],"synonyms":[{"name":"ATFB14","type":"related"},{"name":"SCN2B familial atrial fibrillation","type":"exact"},{"name":"atrial fibrillation, familial, 14","type":"exact"},{"name":"atrial fibrillation, familial, type 14","type":"exact"},{"name":"familial atrial fibrillation caused by mutation in SCN2B","type":"exact"}],"termid":"MONDO:0014156","xrefs":{"Monarch":{"xref_id":"0014156"}}}


id: PBO:0114075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase complex assembly factor, LYR family, Fmc1","termid":"PBO:0114075"}


id: FYPO:0001886
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which haploid cells undergo meiotic nuclear division and attempt to sporulate. Haploid meiosis often results in the formation of a structure that resembles an azygotic ascus. Spores produced from a haploid cell have poor viability and appear to contain only 1/2C DNA on average.","definition_xrefs":["DOI:10.1007/BF00332932","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle entry","termid":"FYPO:0009006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"meiotic cell cycle entry and sporulation in haploid","secondary_identifiers":["FYPO:0001887"],"synonyms":[{"name":"haploid meiosis","type":"related"},{"name":"haploid sporulation","type":"related"},{"name":"meiosis in haploid","type":"related"},{"name":"meiotic nuclear division and sporulation in haploid","type":"narrow"},{"name":"sporulation in haploid","type":"related"},{"name":"untimely meiosis","type":"broad"}],"termid":"FYPO:0001886"}


id: GO:0098804
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a non-motile cilium.","definition_xrefs":["GOC:cilia","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary membrane","termid":"GO:0060170"},{"relation_name":"part_of","term_name":"non-motile cilium","termid":"GO:0097730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"non-motile cilium membrane","synonyms":[{"name":"nonmotile primary cilium membrane","type":"related"}],"termid":"GO:0098804"}


id: MONDO:0015442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary breast and ovarian cancer syndrome (obsolete MONDO:0015442)","termid":"MONDO:0015442","xrefs":{"Monarch":{"xref_id":"0015442"}}}


id: PBO:0018084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Tam13","termid":"PBO:0018084"}


id: GO:0006817
data:
  {"annotated_genes":["SJAG_00233","SJAG_00547","SJAG_01059","SJAG_04241","SJAG_04990","SJAG_01033"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990547"},{"annotations":[117793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180029"},{"annotations":[111677,114720,118512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035435"},{"annotations":[101310],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000185"}]},"cv_name":"biological_process","definition":"The directed movement of phosphate ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00233":null,"SJAG_00547":null,"SJAG_01033":null,"SJAG_01059":null,"SJAG_04241":null,"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"phosphate ion transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"phosphate transport","type":"related"}],"termid":"GO:0006817","terms_by_termid":{"GO:0035435":null,"GO:0180029":null,"GO:1990547":null,"GO:2000185":null}}


id: PBO:0045318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double C2 domain alpha","termid":"PBO:0045318"}


id: PBO:0043614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMM domain containing 4 pseudogene 2","termid":"PBO:0043614"}


id: GO:0046765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral budding that starts with formation of a membrane curvature in the host nuclear membrane.","definition_xrefs":["GOC:bf","ISBN:0072370319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral budding","termid":"GO:0046755"},{"relation_name":"part_of","term_name":"exit of virus from host cell nucleus by nuclear egress","termid":"GO:0046802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral budding from nuclear membrane","secondary_identifiers":["GO:0046749"],"synonyms":[{"name":"nuclear membrane viral budding","type":"exact"},{"name":"nuclear membrane viral budding during viral capsid envelopment","type":"related"},{"name":"viral budding from nuclear membrane by viral capsid envelopment","type":"related"},{"name":"viral budding from nuclear membrane during viral capsid envelopment","type":"related"},{"name":"virus budding from nuclear membrane","type":"exact"},{"name":"virus budding from nuclear membrane by viral capsid envelopment","type":"exact"},{"name":"virus budding from nuclear membrane during viral capsid envelopment","type":"related"}],"termid":"GO:0046765"}


id: PBO:0061659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUMB like endocytic adaptor protein","termid":"PBO:0061659"}


id: GO:0075029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The development of a swollen tip at the growing end of a symbiont spore which usually flattens against the host cell surface prior to appressorium formation.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of infection structure","termid":"GO:0075015"},{"relation_name":"part_of","term_name":"initiation of appressorium formation","termid":"GO:0075025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of appressorium germ tube hook structure","synonyms":[{"name":"formation of germ tube tip of symbiont on or near the exterior of host","type":"exact"},{"name":"formation of symbiont germ tube hook structure for appressorium development","type":"exact"},{"name":"formation of symbiont germ tube hook structure on or near host","type":"related"},{"name":"symbiont germ tube hook structure formation on or near host","type":"exact"}],"termid":"GO:0075029"}


id: PBO:0004323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Cwf22","termid":"PBO:0004323"}


id: GO:0010983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of high-density lipoprotein particle clearance. High-density lipoprotein particle clearance is the process in which a high-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of high-density lipoprotein particle clearance","termid":"GO:0010982"},{"relation_name":"is_a","term_name":"positive regulation of lipoprotein particle clearance","termid":"GO:0010986"},{"relation_name":"positively_regulates","term_name":"high-density lipoprotein particle clearance","termid":"GO:0034384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of high-density lipoprotein particle clearance","termid":"GO:0010983"}


id: MOD:01727
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Proteome Sciences TMT6plex-126 reagent acylated residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"TMT6plex-126 reporter+balance reagent acylated residue","termid":"MOD:01720"},{"relation_name":"derives_from","term_name":"cysTMT6plex-zero reporter+balance reagent cysteine disulfide","termid":"MOD:01822"},{"relation_name":"derives_from","term_name":"cysTMT6plex-126 reporter+balance reagent cysteine disulfide","termid":"MOD:01823"},{"relation_name":"is_a","term_name":"TMT6plex reporter fragment","termid":"MOD:01716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-126 reporter fragment","synonyms":[{"name":"2,6-dimethyl-1-methylidenepiperidinium","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"},{"name":"cysTMT6plex-126 reporter fragment","type":"exact"}],"termid":"MOD:01727"}


id: GO:1900126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hyaluronan biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of hyaluronan biosynthetic process","termid":"GO:1900125"},{"relation_name":"negatively_regulates","term_name":"hyaluronan biosynthetic process","termid":"GO:0030213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of hyaluronan biosynthetic process","synonyms":[{"name":"down regulation of hyaluronan anabolism","type":"exact"},{"name":"down regulation of hyaluronan biosynthesis","type":"exact"},{"name":"down regulation of hyaluronan biosynthetic process","type":"exact"},{"name":"down regulation of hyaluronan formation","type":"exact"},{"name":"down regulation of hyaluronan synthesis","type":"exact"},{"name":"down-regulation of hyaluronan anabolism","type":"exact"},{"name":"down-regulation of hyaluronan biosynthesis","type":"exact"},{"name":"down-regulation of hyaluronan biosynthetic process","type":"exact"},{"name":"down-regulation of hyaluronan formation","type":"exact"},{"name":"down-regulation of hyaluronan synthesis","type":"exact"},{"name":"downregulation of hyaluronan anabolism","type":"exact"},{"name":"downregulation of hyaluronan biosynthesis","type":"exact"},{"name":"downregulation of hyaluronan biosynthetic process","type":"exact"},{"name":"downregulation of hyaluronan formation","type":"exact"},{"name":"downregulation of hyaluronan synthesis","type":"exact"},{"name":"inhibition of hyaluronan anabolism","type":"exact"},{"name":"inhibition of hyaluronan biosynthesis","type":"exact"},{"name":"inhibition of hyaluronan biosynthetic process","type":"narrow"},{"name":"inhibition of hyaluronan formation","type":"exact"},{"name":"inhibition of hyaluronan synthesis","type":"exact"},{"name":"negative regulation of hyaluronan anabolism","type":"exact"},{"name":"negative regulation of hyaluronan biosynthesis","type":"exact"},{"name":"negative regulation of hyaluronan formation","type":"exact"},{"name":"negative regulation of hyaluronan synthesis","type":"exact"}],"termid":"GO:1900126"}


id: PBO:0052298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KHDRBS2 3'UTR overlapping transcript 1","termid":"PBO:0052298"}


id: PBO:0083131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual endo- and exopolyphosphatase with a role in phosphate metabolism; acts as both an endopolyphosphatase cleaving long chains of polyphosphate distributively to generate shorter polymer chains and as an exopolyphosphatase catalyzing the hydrolysis of terminal phosphate from polyphosphate; localizes to the vacuole, nucleus and cytosol; functions as a homodimer; relocalizes from vacuole to cytoplasm upon DNA replication stress","termid":"PBO:0083131"}


id: MONDO:0044235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hsr (obsolete MONDO:0044235)","secondary_identifiers":["OMIM:139900"],"synonyms":[{"name":"HSR","type":"related"},{"name":"Handedness","type":"exact"},{"name":"hand skill, relative","type":"related"},{"name":"handedness","type":"related"}],"termid":"MONDO:0044235","xrefs":{"Monarch":{"xref_id":"0044235"}}}


id: GO:0042481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation and development of a tooth or teeth.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"odontogenesis","termid":"GO:0042476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of odontogenesis","secondary_identifiers":["GO:0042484"],"synonyms":[{"name":"regulation of odontogenesis of calcareous or chitinous tooth","type":"narrow"},{"name":"regulation of tooth development","type":"exact"}],"termid":"GO:0042481"}


id: PBO:0061622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 6","termid":"PBO:0061622"}


id: PBO:0050099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 9","termid":"PBO:0050099"}


id: GO:0019473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including glutarate, by acetylation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine catabolic process","termid":"GO:0019477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-lysine catabolic process to glutarate, by acetylation","secondary_identifiers":["MetaCyc:LYSDEGII-PWY"],"synonyms":[{"name":"L-lysine breakdown to glutarate, by acetylation","type":"exact"},{"name":"L-lysine degradation to glutarate, by acetylation","type":"exact"}],"termid":"GO:0019473"}


id: GO:1901397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transforming growth factor beta2 activation.","definition_xrefs":["GOC:sl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transforming growth factor beta2 activation (obsolete GO:1901397)","synonyms":[{"name":"activation of TGF-beta 2 activation","type":"exact"},{"name":"activation of TGFB2 activation","type":"exact"},{"name":"activation of TGFbeta 2 activation","type":"exact"},{"name":"activation of transforming growth factor beta2 activation","type":"narrow"},{"name":"positive regulation of TGF-beta 2 activation","type":"exact"},{"name":"positive regulation of TGFB2 activation","type":"exact"},{"name":"positive regulation of TGFbeta 2 activation","type":"exact"},{"name":"up regulation of TGF-beta 2 activation","type":"exact"},{"name":"up regulation of TGFB2 activation","type":"exact"},{"name":"up regulation of TGFbeta 2 activation","type":"exact"},{"name":"up regulation of transforming growth factor beta2 activation","type":"exact"},{"name":"up-regulation of TGF-beta 2 activation","type":"exact"},{"name":"up-regulation of TGFB2 activation","type":"exact"},{"name":"up-regulation of TGFbeta 2 activation","type":"exact"},{"name":"up-regulation of transforming growth factor beta2 activation","type":"exact"},{"name":"upregulation of TGF-beta 2 activation","type":"exact"},{"name":"upregulation of TGFB2 activation","type":"exact"},{"name":"upregulation of TGFbeta 2 activation","type":"exact"},{"name":"upregulation of transforming growth factor beta2 activation","type":"exact"}],"termid":"GO:1901397"}


id: GO:1901165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of trophoblast cell migration.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of trophoblast cell migration","termid":"GO:1901163"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"trophoblast cell migration","termid":"GO:0061450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of trophoblast cell migration","synonyms":[{"name":"activation of trophoblast cell migration","type":"narrow"},{"name":"up regulation of trophoblast cell migration","type":"exact"},{"name":"up-regulation of trophoblast cell migration","type":"exact"},{"name":"upregulation of trophoblast cell migration","type":"exact"}],"termid":"GO:1901165"}


id: MONDO:1011768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone spavin, non-human animal","secondary_identifiers":["OMIA:001232"],"termid":"MONDO:1011768","xrefs":{"Monarch":{"xref_id":"1011768"}}}


id: GO:0070902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine in a mitochondrial tRNA molecule.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA pseudouridine synthesis","termid":"GO:0031119"},{"relation_name":"is_a","term_name":"mitochondrial tRNA modification","termid":"GO:0070900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0140053","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"mitochondrial tRNA pseudouridine synthesis","termid":"GO:0070902"}


id: MONDO:0008457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 6 (SCA6) is the most common subtype of autosomal dominant cerebellar ataxia type III (ADCA type III) characterized by late-onset and slowly progressive gait ataxia and other cerebellar signs such as impaired muscle coordination and nystagmus.","definition_xrefs":["Orphanet:98758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type III","termid":"MONDO:0019793"},{"relation_name":"is_a","term_name":"CACNA1A-related complex neurodevelopmental disorder","termid":"MONDO:0100254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426","MONDO:0002039","MONDO:0700092"],"is_obsolete":false,"name":"spinocerebellar ataxia type 6","secondary_identifiers":["GARD:10351","SCTID:715752006","DOID:0050956","UMLS:C0752124","MEDGEN:148458","NANDO:1200042","OMIM:183086","NCIT:C142838","icd11.foundation:1056119281"],"synonyms":[{"name":"CACNA1A autosomal dominant cerebellar ataxia type III","type":"exact"},{"name":"SCA6","type":"exact"},{"name":"autosomal dominant cerebellar ataxia type III caused by mutation in CACNA1A","type":"exact"},{"name":"spinocerebellar ataxia 6","type":"related"},{"name":"spinocerebellar ataxia type 6","type":"exact"}],"termid":"MONDO:0008457","xrefs":{"Monarch":{"xref_id":"0008457"}}}


id: PBO:0072799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 4 pseudogene 5","termid":"PBO:0072799"}


id: GO:1903189
data:
  {"annotated_genes":["SJAG_04404","SJAG_02106"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73524,74934],"is_not":false,"summary":null,"term":"GO:1903189"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glyoxal.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GO_REF:0000068","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde metabolic process","termid":"GO:0006081"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02106":null,"SJAG_04404":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glyoxal metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"glyoxal metabolism","type":"exact"}],"termid":"GO:1903189","terms_by_termid":{"GO:1903189":null}}


id: MONDO:0044983
data:
  {"annotated_genes":["SJAG_00031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"}]},"cv_name":"mondo","definition":"A benign mesenchymal neoplasm composed of adipose (fatty) tissue. The most common representative of this category is the lipoma.","definition_xrefs":["NCIT:C4502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign connective and soft tissue neoplasm","termid":"MONDO:0000654"},{"relation_name":"is_a","term_name":"tumor of adipose tissue","termid":"MONDO:0021354"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00031":null},"genotype_count":0,"is_obsolete":false,"name":"benign lipomatous neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:226447034","MEDGEN:91084","UMLS:C0346118"],"synonyms":[{"name":"adipose tissue benign connective and soft tissue neoplasm","type":"exact"},{"name":"benign adipose tissue neoplasm","type":"exact"},{"name":"benign adipose tissue tumor","type":"exact"},{"name":"benign adipose tissue tumour","type":"exact"},{"name":"benign connective and soft tissue neoplasm of adipose tissue","type":"exact"},{"name":"benign lipomatous neoplasm","type":"exact"},{"name":"benign lipomatous tumor","type":"exact"},{"name":"benign lipomatous tumour","type":"exact"},{"name":"benign neoplasm of adipose tissue","type":"exact"},{"name":"benign neoplasm of the adipose tissue","type":"exact"},{"name":"benign tumor of adipose tissue","type":"related"},{"name":"benign tumor of the adipose tissue","type":"exact"},{"name":"benign tumour of adipose tissue","type":"related"},{"name":"benign tumour of the adipose tissue","type":"exact"}],"termid":"MONDO:0044983","terms_by_termid":{"MONDO:0007908":null},"xrefs":{"Monarch":{"xref_id":"0044983"}}}


id: PBO:0074519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A11","termid":"PBO:0074519"}


id: PBO:0000632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine N5 monooxygenase (predicted)","termid":"PBO:0000632"}


id: PBO:0053859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1132","termid":"PBO:0053859"}


id: GO:0061161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the establishment of bipolar cell polarity that regulates the shape of a cell.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of bipolar cell polarity regulating cell shape","termid":"GO:0061160"},{"relation_name":"is_a","term_name":"positive regulation of establishment of bipolar cell polarity","termid":"GO:0061173"},{"relation_name":"is_a","term_name":"positive regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"positively_regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"positive regulation of establishment of bipolar cell polarity regulating cell shape","termid":"GO:0061161"}


id: PBO:0004223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase","termid":"PBO:0004223"}


id: PR:Q9P7K3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.02c gene.","definition_xrefs":["UniProtKB:Q9P7K3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized kinase C24B10.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.02c","synonyms":[{"name":"Spom972h-SPCC24B10.02c","type":"exact"}],"termid":"PR:Q9P7K3"}


id: PBO:0060662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal calcium sensor 1","termid":"PBO:0060662"}


id: GO:0009373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involving pheromones that modulates the frequency, rate or extent of transcription.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription by pheromones (obsolete GO:0009373)","termid":"GO:0009373"}


id: PBO:0080837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1 pseudogene 1","termid":"PBO:0080837"}


id: FYPO:0003763
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is inviable and contains one nucleus and no septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aseptate mononucleate vegetative cell","termid":"FYPO:0003785"},{"relation_name":"is_a","term_name":"inviable aseptate vegetative cell","termid":"FYPO:0003931"},{"relation_name":"is_a","term_name":"inviable mononucleate vegetative cell","termid":"FYPO:0006430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0000032","FYPO:0000004","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"inviable aseptate mononucleate vegetative cell","synonyms":[{"name":"inviable aseptate mononucleate cell during vegetative growth","type":"exact"},{"name":"inviable aseptate mononucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable mononucleate aseptate vegetative cell","type":"exact"},{"name":"inviable unseptated mononucleate vegetative cell","type":"exact"},{"name":"lethal; aseptate mononucleate vegetative cell","type":"exact"}],"termid":"FYPO:0003763"}


id: GO:0046968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a peptide antigen into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. The peptide antigen is typically, but not always, processed from an endogenous or exogenous protein.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide transport","termid":"GO:0015833"},{"relation_name":"part_of","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"peptide antigen transport","termid":"GO:0046968"}


id: PR:P56329
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 2 subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01020","PANTHER:PTHR23001:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC32A11.04c","secondary_identifiers":["UniProtKB:P56329"],"synonyms":[{"name":"Spom972h-EIF2S2","type":"exact"},{"name":"eIF-2-beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P56329"}


id: MONDO:0008572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tibial hemimelia-polysyndactyly-triphalangeal thumb syndrome is a rare, genetic dysostosis syndrome, with marked inter- and intra-familial variation, typically characterized by triphalangeal thumbs, hand and/or foot polysyndactyly and/or absent/hypoplastic tibiae (associated with duplication of fibulae in some cases), although isolated triphalangeal thumbs have also been reported. It is often accompanied with remarkable short stature and additional features may include radio-ulnar synostosis and hand oligodactyly, as well as abnormal carpal and metatarsal bones.","definition_xrefs":["Orphanet:988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"tibia, hypoplasia or aplasia of, with polydactyly","secondary_identifiers":["MESH:C535564","UMLS:C1861098","GARD:8309","Orphanet:3332","SCTID:716741008","OMIM:188740","MEDGEN:348786","MESH:C566046","DOID:0111564"],"synonyms":[{"name":"THYP","type":"related"},{"name":"Werner mesomelic syndrome","type":"exact"},{"name":"absence of tibia with polydactyly","type":"related"},{"name":"absent tibia-polydactyly syndrome","type":"exact"},{"name":"hypoplastic or aplastic tibia with polydactyly","type":"exact"},{"name":"hypoplastic tibiae-postaxial polydactyly syndrome","type":"exact"},{"name":"polydactyly with absent tibia","type":"related"},{"name":"tibia, hypoplasia or aplasia of, with polydactyly","type":"exact"},{"name":"tibial hemimelia-polydactyly-triphalangeal thumbs with fibular dimelia","type":"related"},{"name":"tibial hemimelia-polysyndactyly-triphalangeal thumb syndrome","type":"related"}],"termid":"MONDO:0008572","xrefs":{"Monarch":{"xref_id":"0008572"}}}


id: PBO:0040689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branched chain amino acid transaminase 1","termid":"PBO:0040689"}


id: PBO:0041932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 3","termid":"PBO:0041932"}


id: GO:0005057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Conveys a signal from an upstream receptor or intracellular signal transducer, converting the signal into a form where it can ultimately trigger a change in the state or activity of a cell.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transducer activity, downstream of receptor (obsolete GO:0005057)","synonyms":[{"name":"intracellular signal transducer activity","type":"exact"},{"name":"receptor signaling protein activity","type":"exact"},{"name":"receptor signalling protein activity","type":"exact"}],"termid":"GO:0005057"}


id: GO:0052409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving cellulose in the cell wall of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by organism of cell wall cellulose in other organism involved in symbiotic interaction (obsolete GO:0052409)","synonyms":[{"name":"metabolism by organism of cell wall cellulose in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052409"}


id: PATO:0000548
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000548 blue light sensitivity value (obsolete PATO:0000548)","termid":"PATO:0000548"}


id: MOD:00617
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a residue containing common isotopes to a 3x(2)H labeled residue methyl ester.","definition_xrefs":["Unimod:298","OMSSA:21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3x(2)H residue methyl ester","synonyms":[{"name":"Methyl:2H(3)","type":"related"},{"name":"ctermpeptrideuteromethyl","type":"exact"},{"name":"deuterated methyl ester","type":"related"}],"termid":"MOD:00617"}


id: PBO:0049857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1","termid":"PBO:0049857"}


id: MONDO:0012856
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Birk-Barel syndrome is an inherited condition characterized by intellectual disability, hypotonia, hyperactivity, and unusual facial features. The condition is caused by mutations in the KCNK9 gene on chromosome 8. This condition demonstrates dominant inheritance with paternal imprinting, which means that a mutation in the maternal gene will result in disease, but a mutation in the paternal gene will have no effect (imprinted with paternal silencing).","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Birk-Barel syndrome","secondary_identifiers":["OMIM:612292","MESH:C567357","DOID:0050675","GARD:10358","Orphanet:166108","SCTID:764861005","NORD:1896","MEDGEN:393583","UMLS:C2676770"],"synonyms":[{"name":"BIRK-Barel intellectual disability dysmorphism syndrome","type":"exact"},{"name":"BIRK-Barel mental retardation dysmorphism syndrome","type":"exact"},{"name":"Birk Barel intellectual disability dysmorphism syndrome","type":"related"},{"name":"Birk Barel mental retardation dysmorphism syndrome","type":"related"},{"name":"Birk-Barel syndrome","type":"exact"},{"name":"KCNK9 Imprinting Syndrome","type":"exact"},{"name":"intellectual disability with hypotonia and Facial Dysmorphism","type":"related"},{"name":"intellectual disability, Birk-Barel type","type":"related"},{"name":"intellectual disability-hypotonia-facial dysmorphism syndrome","type":"exact"},{"name":"mental retardation with hypotonia and Facial Dysmorphism","type":"related"}],"termid":"MONDO:0012856","xrefs":{"Monarch":{"xref_id":"0012856"}}}


id: MONDO:0971149
data:
  {"annotated_genes":["SJAG_00773"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87874],"is_not":false,"summary":null,"term":"MONDO:0971149"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 30b, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1854426","UMLS:C5935571","OMIM:620607"],"termid":"MONDO:0971149","terms_by_termid":{"MONDO:0971149":null},"xrefs":{"Monarch":{"xref_id":"0971149"}}}


id: PBO:0048774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP-mannose pyrophosphorylase A","termid":"PBO:0048774"}


id: PBO:0077488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 208","termid":"PBO:0077488"}


id: PBO:0044367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c, testis, pseudogene","termid":"PBO:0044367"}


id: SO:0000867
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A frameshift caused by deleting two bases.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift","termid":"SO:0000865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_2_frameshift","synonyms":[{"name":"minus 2 frameshift","type":"exact"}],"termid":"SO:0000867"}


id: MONDO:1011945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypothyroidism and dwarfism, non-human animal","secondary_identifiers":["OMIA:000537"],"termid":"MONDO:1011945","xrefs":{"Monarch":{"xref_id":"1011945"}}}


id: PBO:0077672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 18","termid":"PBO:0077672"}


id: MONDO:0013156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type B","termid":"MONDO:0000172"},{"relation_name":"is_a","term_name":"myopathy caused by variation in FKTN","termid":"MONDO:0700067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336","MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (congenital without intellectual disability), type B4","secondary_identifiers":["OMIM:613152","GARD:18456","MEDGEN:413465","UMLS:C2751052","DOID:0112379"],"synonyms":[{"name":"MDDGB4","type":"related"},{"name":"congenital muscular dystrophy-FKTN related","type":"exact"},{"name":"muscular dystrophy, congenital, Fktn-related","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital without intellectual disability), type B, 4","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital without mental retardation), type B, 4","type":"related"}],"termid":"MONDO:0013156","xrefs":{"Monarch":{"xref_id":"0013156"}}}


id: PBO:0056414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCHF10 divergent transcript","termid":"PBO:0056414"}


id: PBO:0050367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 70","termid":"PBO:0050367"}


id: GO:0070524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11-beta-hydroxysteroid + NADP+ = an 11-oxosteroid + NADPH + H+.","definition_xrefs":["RHEA:11388","PMID:16216911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"11-beta-hydroxysteroid dehydrogenase [NAD(P)+] activity","termid":"GO:0003845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"11-beta-hydroxysteroid dehydrogenase (NADP+) activity","secondary_identifiers":["EC:1.1.1.146","Reactome:R-HSA-9757706","Reactome:R-HSA-9759259","MetaCyc:11-BETA-HYDROXYSTEROID-DEHYDROGENASE-RXN","Wikipedia:11beta-hydroxysteroid_dehydrogenase"],"synonyms":[{"name":"beta-hydroxysteroid dehydrogenase","type":"broad"},{"name":"corticosteroid 11-beta-dehydrogenase activity","type":"related"}],"termid":"GO:0070524"}


id: PBO:0109131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRIPTO pseudogene 4","termid":"PBO:0109131"}


id: PBO:0057016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 105-1","termid":"PBO:0057016"}


id: MONDO:0022598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly absence of distal phalanges","termid":"MONDO:0022598","xrefs":{"Monarch":{"xref_id":"0022598"}}}


id: GO:0048275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The acetylation of the N-terminal arginine of proteins; catalyzed by an uncharacterized arginyl-peptide alpha-N-acetyltransferase.","definition_xrefs":["RESID:AA0354","GOC:jsg","PMID:12883043"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-arginine acetylation (obsolete GO:0048275)","termid":"GO:0048275"}


id: MONDO:0000171
data:
  {"annotated_genes":["SJAG_03188","SJAG_04316","SJAG_01491","SJAG_04053"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87676,87677,87678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009364"},{"annotations":[87764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014140"},{"annotations":[88496,88497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013154"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"qualitative or quantitative defects of FKRP","termid":"MONDO:0016156"},{"relation_name":"excluded_subClassOf","term_name":"qualitative or quantitative defects of protein O-mannosyltransferase 1","termid":"MONDO:0016184"},{"relation_name":"excluded_subClassOf","term_name":"qualitative or quantitative defects of protein O-mannosyltransferase 2","termid":"MONDO:0016185"},{"relation_name":"excluded_subClassOf","term_name":"cobblestone lissencephaly","termid":"MONDO:0018869"},{"relation_name":"excluded_subClassOf","term_name":"congenital vitreoretinal dysplasia","termid":"MONDO:0020247"},{"relation_name":"excluded_subClassOf","term_name":"myopathy caused by variation in FKRP","termid":"MONDO:0700066"},{"relation_name":"excluded_subClassOf","term_name":"myopathy caused by variation in POMGNT1","termid":"MONDO:0700068"},{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy","termid":"MONDO:0018276"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01491":null,"SJAG_03188":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy, type A","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:2599","OMIMPS:236670","MEDGEN:75553","MESH:D058494","NCIT:C99109","UMLS:C0265221","DOID:0050560","Orphanet:899","SCTID:111504002"],"synonyms":[{"name":"Chemke syndrome","type":"related"},{"name":"Pagon syndrome","type":"related"},{"name":"WWS","type":"exact"},{"name":"Walker-Warburg muscular dystrophy","type":"exact"},{"name":"Walker-Warburg syndrome","type":"exact"},{"name":"Warburg syndrome","type":"related"},{"name":"cerebroocular dysgenesis","type":"related"},{"name":"cerebroocular dysplasia muscular dystrophy syndrome","type":"related"},{"name":"cerebroocular dysplasia-muscular dystrophy syndrome","type":"exact"},{"name":"hard +/- E syndrome","type":"related"},{"name":"hard syndrome","type":"exact"},{"name":"hydrocephalus, agyria and retinal dysplasia","type":"related"},{"name":"hydrocephalus-agyria-retinal dysplasia syndrome","type":"exact"}],"termid":"MONDO:0000171","terms_by_termid":{"MONDO:0009364":null,"MONDO:0013154":null,"MONDO:0014140":null},"xrefs":{"Monarch":{"xref_id":"0000171"}}}


id: PBO:0069085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 332, pseudogene","termid":"PBO:0069085"}


id: FYPO:0003448
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, is shaped in the form of a spheroid, has a larger volume than normal, and in which vacuoles are more visible (usually by microscopy) than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"vacuolated","termid":"FYPO:0001581"},{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"viable swollen spheroid vegetative cell","termid":"FYPO:0004559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000004","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"viable swollen vacuolated spheroid vegetative cell","synonyms":[{"name":"viable enlarged vacuolated spheroid vegetative cell","type":"related"},{"name":"viable enlarged volume vacuolated spheroid vegetative cell","type":"exact"},{"name":"viable large vacuolated spheroid vegetative cell","type":"related"},{"name":"viable swollen rounded vacuolated vegetative cell","type":"exact"},{"name":"viable swollen vacuolated spheroid cell during vegetative growth","type":"exact"},{"name":"viable swollen vacuolated spheroid vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003448"}


id: MONDO:0016158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of narcolepsy characterized by excessive day-time sleepiness associated with uncontrollable sleep urges and cataplexy (loss of muscle tone often triggered by pleasant emotions).","definition_xrefs":["Orphanet:2073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"narcolepsy","termid":"MONDO:0021107"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"narcolepsy-cataplexy syndrome","secondary_identifiers":["ICD10CM:G47.419","MedDRA:10028713","ICD10CM:G47.4","icd11.foundation:1851015159","ICD9:347.0","GARD:7162","MEDGEN:199638","UMLS:C0751362"],"synonyms":[{"name":"Gelineau disease","type":"exact"},{"name":"Gelineau syndrome","type":"exact"},{"name":"Gelineau's syndrome","type":"exact"},{"name":"Gélineau disease","type":"exact"},{"name":"narcolepsy type 1","type":"exact"},{"name":"narcolepsy with cataplexy","type":"exact"},{"name":"narcolepsy-cataplexy syndrome","type":"exact"},{"name":"narcoleptic syndrome","type":"related"}],"termid":"MONDO:0016158","xrefs":{"Monarch":{"xref_id":"0016158"}}}


id: PBO:0034202
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_organization_of","termid":"PBO:0034202"}


id: PBO:0063158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired box 4","termid":"PBO:0063158"}


id: GO:0033542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A fatty acid beta-oxidation pathway by which fatty acids having cis-double bonds on even-numbered carbons are degraded. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and ends when only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).","definition_xrefs":["GOC:mah","MetaCyc:PWY-5138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid beta-oxidation","termid":"GO:0006635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"fatty acid beta-oxidation, unsaturated, even number","termid":"GO:0033542"}


id: GO:0043180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the generation of rhythmic, synchronous inhibitory synaptic inputs in a neural circuit.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythmic synaptic transmission","termid":"GO:0060024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"rhythmic inhibition","termid":"GO:0043180"}


id: SO:1000142
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An autosynaptic chromosome carrying the two right (D = dextro) telomeres.","definition_xrefs":["FB:manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosynaptic_chromosome","termid":"SO:1000136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dextrosynaptic_chromosome","synonyms":[{"name":"dextrosynaptic chromosome","type":"exact"}],"termid":"SO:1000142"}


id: PBO:0063607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet factor 4 variant 1","termid":"PBO:0063607"}


id: PBO:0086280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a potential role in response to iron deprivation; transcription increases during iron deprivation and during treatment with 2-(6-benzyl-2-pyridyl)quinazoline (BPQ) and copper; regulated by Aft1p and, to a lesser extent, by Aft2p; originally identified as a syntenic homolog of an Ashbya gossypii gene; localizes to nucleus and cytoplasm, and nuclear localization is enhanced under iron-replete conditions","termid":"PBO:0086280"}


id: PBO:0116752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related BAF chromatin remodeling complex subunit D2","termid":"PBO:0116752"}


id: GO:0018300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 6Fe-6S cluster by hexakis-L-cysteinyl hexairon hexasulfide.","definition_xrefs":["RESID:AA0226"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via hexakis-L-cysteinyl hexairon hexasulfide (obsolete GO:0018300)","synonyms":[{"name":"iron incorporation into iron-sulfur cluster via hexakis-L-cysteinyl hexairon hexasulfide","type":"exact"},{"name":"iron incorporation into iron-sulphur cluster via hexakis-L-cysteinyl hexairon hexasulphide","type":"exact"}],"termid":"GO:0018300"}


id: MONDO:0003590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A liposarcoma characterized by the presence of a fibroblastic component.","definition_xrefs":["NCIT:C6509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liposarcoma","termid":"MONDO:0005060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fibroblastic liposarcoma","secondary_identifiers":["ICDO:8857/3","DOID:5698","MEDGEN:266103","UMLS:C1266130"],"synonyms":[{"name":"fibroblastic liposarcoma","type":"exact"},{"name":"fibroblastic liposarcoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003590","xrefs":{"Monarch":{"xref_id":"0003590"}}}


id: PBO:0066923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 225","termid":"PBO:0066923"}


id: PBO:0044816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 108E (pseudogene)","termid":"PBO:0044816"}


id: PBO:0030135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_zinc_starvation","termid":"PBO:0030135"}


id: PBO:0059211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rRNA methyltransferase 3","termid":"PBO:0059211"}


id: PATO:0000316
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000316 relative color value (obsolete PATO:0000316)","termid":"PATO:0000316"}


id: GO:0047897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydrofolate + ATP + formate = 10-formyldihydrofolate + ADP + H+ + phosphate.","definition_xrefs":["RHEA:24328","EC:6.3.4.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"formate-dihydrofolate ligase activity","secondary_identifiers":["KEGG_REACTION:R02238","MetaCyc:FORMATE--DIHYDROFOLATE-LIGASE-RXN"],"synonyms":[{"name":"dihydrofolate formyltransferase activity","type":"related"},{"name":"formate:dihydrofolate ligase (ADP-forming)","type":"related"},{"name":"formyl dihydrofolate synthase activity","type":"related"}],"termid":"GO:0047897"}


id: FYPO:0007021
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional methylation of a cytosine residue in a tRNA molecule to form 2'-O-methylcytidine does not occur.","definition_xrefs":["PMID:25404562","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000294","FYPO:0005447"],"is_obsolete":false,"name":"abolished tRNA cytosine 2'-O-methylation","synonyms":[{"name":"2'-O-methylcytidine absent from tRNA","type":"related"},{"name":"abolished tRNA 2'-O-methylcytidine formation","type":"exact"},{"name":"abolished tRNA Cm formation","type":"exact"},{"name":"abolished tRNA cytosine 2'-O-methylation during mitotic cell cycle","type":"related"},{"name":"abolished tRNA cytosine 2'-O-methylation during vegetative growth","type":"exact"},{"name":"tRNA cytosine 2'-O-methylation abolished","type":"related"}],"termid":"FYPO:0007021"}


id: FYPO:0000161
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"}],"single_locus_phenotype":[{"annotations":[121359,121593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[121424,121671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which contractile ring assembly is abnormal. Contractile ring assembly is the part of cytokinesis in which the actomyosin contractile ring is formed of actin, myosin, and associated proteins.","definition_xrefs":["GO:1903475","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis during vegetative growth","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring organization","termid":"FYPO:0004738"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0005447","FYPO:0000032","FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"name":"abnormal actomyosin contractile ring assembly","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_01143"],"single_locus_genotype_uniquenames":["sty1delta","mid1delta"],"synonyms":[{"name":"abnormal actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"abnormal actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"abnormal actomyosin contractile ring formation","type":"related"},{"name":"abnormal contractile ring assembly","type":"exact"},{"name":"abnormal cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"abnormal cytokinetic contractile ring assembly","type":"exact"},{"name":"abnormal cytokinetic ring assembly","type":"related"},{"name":"abnormal cytokinetic ring formation","type":"related"},{"name":"abnormal mitotic contractile ring assembly","type":"exact"}],"termid":"FYPO:0000161","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000248":null,"FYPO:0000729":null,"FYPO:0002998":null,"FYPO_EXT:0000001":null}}


id: PBO:0063510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDS5B divergent transcript","termid":"PBO:0063510"}


id: PBO:0086855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative RNA-binding protein; interacts with Mex67p, which is a component of the nuclear pore involved in nuclear mRNA export; MIP6 has a paralog, PES4, that arose from the whole genome duplication","termid":"PBO:0086855"}


id: GO:0070332
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the cell-surface protein CD20 and the Src family tyrosine kinases Lck, Lyn and Fyn.","definition_xrefs":["GOC:mah","PMID:7545683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CD20-Lck-Lyn-Fyn complex","termid":"GO:0070332"}


id: PBO:0058562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6504","termid":"PBO:0058562"}


id: PBO:0116908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, UPF0643 family","termid":"PBO:0116908"}


id: MONDO:0958035
data:
  {"annotated_genes":["SJAG_00377"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87941],"is_not":false,"summary":null,"term":"MONDO:0958035"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00377":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 23","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5882747","OMIM:620686","MEDGEN:1845723"],"termid":"MONDO:0958035","terms_by_termid":{"MONDO:0958035":null},"xrefs":{"Monarch":{"xref_id":"0958035"}}}


id: SO:0001753
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL8 RNA leader sequence to the 5' end of an mRNA. SL8 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL8_acceptor_site","synonyms":[{"name":"SL8 acceptor site","type":"exact"}],"termid":"SO:0001753"}


id: GO:1904447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of folic acid from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:BHF","GOC:hal","GOC:TermGenie","PMID:19762432","GO_REF:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"folate transmembrane transport","termid":"GO:0098838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"folate import across plasma membrane","synonyms":[{"name":"folate import into cell","type":"exact"},{"name":"folic acid import across plasma membrane","type":"related"}],"termid":"GO:1904447"}


id: PBO:0057612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1178","termid":"PBO:0057612"}


id: GO:0018972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving toluene-4-sulfonate, the anion of 4-toluene sulfonic acid, a white crystalline solid which is highly hygroscopic and soluble in water.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"toluene-containing compound metabolic process","termid":"GO:0072490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"toluene-4-sulfonate metabolic process","secondary_identifiers":["MetaCyc:TOLSULFDEG-PWY","UM-BBD_pathwayID:tsa"],"synonyms":[{"name":"4-methylbenzenesulfonate metabolic process","type":"exact"},{"name":"4-methylbenzenesulfonate metabolism","type":"exact"},{"name":"4-toluenesulfonate metabolic process","type":"exact"},{"name":"4-toluenesulfonate metabolism","type":"exact"},{"name":"toluene-4-sulfonate metabolism","type":"exact"},{"name":"toluene-4-sulphonate metabolic process","type":"exact"},{"name":"toluene-4-sulphonate metabolism","type":"exact"}],"termid":"GO:0018972"}


id: PBO:0016951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug129","termid":"PBO:0016951"}


id: GO:0043430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-decaprenyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-methionine = 2-decaprenyl-3-methyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:11583838","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-decaprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity (obsolete GO:0043430)","synonyms":[{"name":"2-decaprenyl-6-methoxy-1,4-benzoquinone methylase activity","type":"exact"}],"termid":"GO:0043430"}


id: MONDO:0100447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinopathy caused by biallelic variants in the AFT6 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ATF6-related retinopathy","synonyms":[{"name":"ACHM7","type":"narrow"},{"name":"ATF6 achromatopsia","type":"narrow"},{"name":"ATF6 retinopathy","type":"exact"},{"name":"ATF6-related retinopathy","type":"exact"},{"name":"achromatopsia 7","type":"narrow"},{"name":"achromatopsia caused by mutation in ATF6","type":"narrow"},{"name":"achromatopsia type 7","type":"narrow"}],"termid":"MONDO:0100447","xrefs":{"Monarch":{"xref_id":"0100447"}}}


id: GO:0140808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tyrosyl-[protein] + NAD+ = H+ + nicotinamide + O-(ADP-D-ribosyl)-L-tyrosyl-[protein].","definition_xrefs":["PMID:30257210","RHEA:58236","PMID:29954836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein mono-ADP-ribosyltransferase activity","termid":"GO:1990404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"NAD+-protein-tyrosine ADP-ribosyltransferase activity","termid":"GO:0140808"}


id: PBO:0000397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin 3","termid":"PBO:0000397"}


id: PBO:0031910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridylate kinase Ura6 (predicted)","termid":"PBO:0031910"}


id: PBO:0076487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TARDBP pseudogene 2","termid":"PBO:0076487"}


id: SO:0000859
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a kind of homology where divergence occurred after a duplication event.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homologous","termid":"SO:0000857"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paralogous","termid":"SO:0000859"}


id: MONDO:0013784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic neurological disorder characterized by neonatal onset of rigidity and intractable seizures, with episodic jerking already beginning in utero. Affected infants have small heads, remain visually inattentive, do not feed independently, and make no developmental progress. Frequent spontaneous apnea and bradycardia usually culminate in cardiopulmonary arrest and death in infancy, although some cases were described with a milder clinical course and survival into childhood. The cause of the disease is a variation in the BRAT1 gene.","definition_xrefs":["Orphanet:435845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"neonatal-onset encephalopathy with rigidity and seizures","secondary_identifiers":["GARD:17718","OMIM:614498","UMLS:C3281029","MEDGEN:482659"],"synonyms":[{"name":"RMFSL","type":"related"},{"name":"lethal neonatal rigidity-multifocal seizure syndrome","type":"exact"},{"name":"lethal neonatal spasticity-epileptic encephalopathy syndrome","type":"exact"},{"name":"neonatal-onset encephalopathy with rigidity and seizures","type":"exact"},{"name":"rigidity and multifocal seizure syndrome, lethal neonatal","type":"related"}],"termid":"MONDO:0013784","xrefs":{"Monarch":{"xref_id":"0013784"}}}


id: PBO:0018207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPT oligopeptide transmembrane transporter family protein Opt3","termid":"PBO:0018207"}


id: PBO:0067904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 206","termid":"PBO:0067904"}


id: GO:0022619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a generative cell. The generative cell gives rise to the sperm cells in the male gametophyte.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"microgametogenesis","termid":"GO:0055046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"generative cell differentiation","termid":"GO:0022619"}


id: PR:000025000
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mfm1, mfm2, or mfm3 genes or 1:1 orthologs thereof.","definition_xrefs":["PRO:MSY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor","synonyms":[{"name":"mfm[1/2/3]","type":"exact"}],"termid":"PR:000025000"}


id: PBO:0080692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WNK lysine deficient protein kinase 4","termid":"PBO:0080692"}


id: PBO:0041595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 6","termid":"PBO:0041595"}


id: GO:1904891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of excitatory synapse assembly.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:TermGenie","GOC:PARL","PMID:21670302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synapse assembly","termid":"GO:0051965"},{"relation_name":"is_a","term_name":"regulation of excitatory synapse assembly","termid":"GO:1904889"},{"relation_name":"positively_regulates","term_name":"excitatory synapse assembly","termid":"GO:1904861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of excitatory synapse assembly","synonyms":[{"name":"activation of excitatory synapse assembly","type":"narrow"},{"name":"activation of excitatory synapse formation","type":"narrow"},{"name":"positive regulation of excitatory synapse formation","type":"exact"},{"name":"up regulation of excitatory synapse assembly","type":"exact"},{"name":"up regulation of excitatory synapse formation","type":"exact"},{"name":"up-regulation of excitatory synapse assembly","type":"exact"},{"name":"up-regulation of excitatory synapse formation","type":"exact"},{"name":"upregulation of excitatory synapse assembly","type":"exact"},{"name":"upregulation of excitatory synapse formation","type":"exact"}],"termid":"GO:1904891"}


id: PBO:0004194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase, PAN complex subunit, Ppk26","termid":"PBO:0004194"}


id: PBO:0003016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 protein family 5","termid":"PBO:0003016"}


id: MONDO:0001196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"psychosexual disorder","termid":"MONDO:0000947"},{"relation_name":"is_a","term_name":"neurological pain disorder","termid":"MONDO:0700057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psychologic dyspareunia","secondary_identifiers":["MESH:D004414","ICD9:302.76","MEDGEN:509600","SCTID:41021005","UMLS:C0154466","DOID:11120"],"synonyms":[{"name":"dyspareunia, psychogenic","type":"exact"},{"name":"non-organic dyspareunia","type":"exact"}],"termid":"MONDO:0001196","xrefs":{"Monarch":{"xref_id":"0001196"}}}


id: MONDO:0011566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"abdominal obesity-metabolic syndrome","termid":"MONDO:0000816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"abdominal obesity-metabolic syndrome quantitative trait locus 2","secondary_identifiers":["UMLS:C1854170","OMIM:605572","MEDGEN:344224"],"synonyms":[{"name":"Abdominal obesity-metabolic syndrome","type":"exact"},{"name":"Aoms2","type":"related"},{"name":"abdominal obesity-metabolic syndrome quantitative trait locus 2","type":"exact"},{"name":"abdominal obesity-metabolic syndrome quantitative trait locus type 2","type":"exact"}],"termid":"MONDO:0011566","xrefs":{"Monarch":{"xref_id":"0011566"}}}


id: PBO:0005882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase 3 (predicted)","termid":"PBO:0005882"}


id: PBO:0073036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptide, CUB domain and EGF like domain containing 1","termid":"PBO:0073036"}


id: PBO:0068899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 141, pseudogene","termid":"PBO:0068899"}


id: PBO:0067801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 103","termid":"PBO:0067801"}


id: PBO:0056621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 1","termid":"PBO:0056621"}


id: PBO:0080816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exoribonuclease 1","termid":"PBO:0080816"}


id: GO:0150033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to lysosome.","definition_xrefs":["GOC:bc","PMID:24305806","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to lysosome","termid":"GO:0150031"},{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"negatively_regulates","term_name":"protein localization to lysosome","termid":"GO:0061462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to lysosome","termid":"GO:0150033"}


id: MONDO:0034962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare ophthalmic disorder with cortical involvement (obsolete MONDO:0034962)","secondary_identifiers":["Orphanet:519343"],"termid":"MONDO:0034962","xrefs":{"Monarch":{"xref_id":"0034962"}}}


id: PBO:0062373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily A member 15 pseudogene","termid":"PBO:0062373"}


id: GO:0046478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lactosylceramides, Gal-beta-(1->4)-Glc-beta-(1->1') ceramides, any compound formed by the replacement of the glycosidic C1 hydroxyl group of lactose by a ceramide group. They are the precursors of both gangliosides and globosides.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ceramide metabolic process","termid":"GO:0006672"},{"relation_name":"is_a","term_name":"glycosphingolipid metabolic process","termid":"GO:0006687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lactosylceramide metabolic process","synonyms":[{"name":"lactosylceramide metabolism","type":"exact"}],"termid":"GO:0046478"}


id: PBO:0004995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptide transmemembrane transporter (predicted)","termid":"PBO:0004995"}


id: PBO:0081022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 3","termid":"PBO:0081022"}


id: PBO:0086856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative RNA-binding protein; involved in regulation of early and middle sporulation genes; forms amyloid-like aggregates under starvation that are active in translational repression","termid":"PBO:0086856"}


id: GO:1990678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the removal of an acetyl group from lysine at position 16 of the histone.","definition_xrefs":["PMID:17446861"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K16 deacetylation (obsolete GO:1990678)","termid":"GO:1990678"}


id: PBO:0036078
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_deactivation_of_mitotic_spindle_assembly_checkpoint","termid":"PBO:0036078"}


id: PBO:0046861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarylacetoacetate hydrolase","termid":"PBO:0046861"}


id: GO:0102990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (8Z,11Z)-5-(pentadeca-8,11,14-trien-1-yl)resorcinol + S-adenosyl-L-methionine = (8Z,11Z)-5-(pentadeca- 8,11,14-trien-1-yl)resorcinol-3-methyl ether + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:26325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"5-n-alk(en)ylresorcinol O-methyltransferase activity","secondary_identifiers":["EC:2.1.1.n7","MetaCyc:RXN-9619"],"termid":"GO:0102990"}


id: PBO:0027756
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_calcium_ion","termid":"PBO:0027756"}


id: PBO:0070943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 51","termid":"PBO:0070943"}


id: PBO:0051296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-27 (pseudogene)","termid":"PBO:0051296"}


id: PR:Q9USZ6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An mRNA turnover protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21141:SF1","OMA:SCHPO02987","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly factor mrt4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11G11.03","secondary_identifiers":["UniProtKB:Q9USZ6"],"synonyms":[{"name":"Spom972h-MRTO4","type":"exact"},{"name":"mRNA turnover protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USZ6"}


id: PBO:0064960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 12","termid":"PBO:0064960"}


id: PBO:0041216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1D nuclear receptor corepressor pseudogene 4","termid":"PBO:0041216"}


id: PBO:0047219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 225 member A","termid":"PBO:0047219"}


id: PR:Q9UUN3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC297.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUN3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C297.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC297.06c","synonyms":[{"name":"Spom972h-SPCC297.06c","type":"exact"}],"termid":"PR:Q9UUN3"}


id: GO:0045277
data:
  {"annotated_genes":["SJAG_01355","SJAG_01190","SJAG_00976","SJAG_03337","SJAG_05629","SJAG_07007","SJAG_01077","SJAG_02504","SJAG_MIT04","SJAG_MIT13","SJAG_MIT20"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62492,69432,73597,76013,91092,110249,116226,117460,121061,121083,121112],"is_not":false,"summary":null,"term":"GO:0045277"}]},"cv_name":"cellular_component","definition":"A part of the respiratory chain, containing the 13 polypeptide subunits of cytochrome c oxidase, including cytochrome a and cytochrome a3. Catalyzes the oxidation of reduced cytochrome c by dioxygen (O2).","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome complex","termid":"GO:0070069"},{"relation_name":"is_a","term_name":"respiratory chain complex","termid":"GO:0098803"},{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00976":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_02504":null,"SJAG_03337":null,"SJAG_05629":null,"SJAG_07007":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"respiratory chain complex IV","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0045287"],"synonyms":[{"name":"cytochrome c oxidase complex","type":"exact"},{"name":"electron transport complex IV","type":"related"}],"termid":"GO:0045277","terms_by_termid":{"GO:0045277":null}}


id: PBO:0027473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mtDNA_absent_from_cell","termid":"PBO:0027473"}


id: PBO:0074379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 pseudogene 5","termid":"PBO:0074379"}


id: PBO:0031399
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_chromosome_congression","termid":"PBO:0031399"}


id: PBO:0047535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 1","termid":"PBO:0047535"}


id: GO:0120035
data:
  {"annotated_genes":["SJAG_00514","SJAG_03453","SJAG_02379","SJAG_04509","SJAG_01794"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113351,91739,92720,89751,95358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of plasma membrane bounded cell projections.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection organization","termid":"GO:0031344"},{"relation_name":"regulates","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of plasma membrane bounded cell projection organization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120035","terms_by_termid":{"GO:1902917":null}}


id: MONDO:0018123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability-obesity-brain malformations-facial dysmorphism syndrome is a rare, syndromic intellectual disability primarily characterized by moderate to severe intellectual disability, true-to-relative microcephaly and brain abnormalities including a thin corpus callosum, cerebellar hypoplasia, cerebral white matter hypoplasia and multi-focal hyperintensity of cerebral white matter on MRI. Obesity and distinctive craniofacial dysmorphism (including brachycephaly, round face, straight eyebrows, synophrys, hypertelorism, epicanthus, wide and depressed nasal bridge, protruding ears with uplifted lobe, downslanting corners of the mouth) are additional features.","definition_xrefs":["Orphanet:352530"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability-obesity-brain malformations-facial dysmorphism syndrome","secondary_identifiers":["UMLS:C4706414","GARD:21521","MEDGEN:1644787"],"synonyms":[{"name":"autosomal recessive intellectual disability due to TRAPPC9 deficiency","type":"exact"},{"name":"intellectual disability-obesity-brain malformations-facial dysmorphism syndrome","type":"exact"}],"termid":"MONDO:0018123","xrefs":{"Monarch":{"xref_id":"0018123"}}}


id: FYPO:0009033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of dihydrocoumarin than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0002682","FYPO:0000003"],"is_obsolete":false,"name":"resistance to dihydrocoumarin","synonyms":[{"name":"resistance to dihydrocoumarin during mitotic cell cycle","type":"related"},{"name":"resistance to dihydrocoumarin during vegetative growth","type":"exact"},{"name":"resistant to dihydrocoumarin","type":"exact"}],"termid":"FYPO:0009033"}


id: GO:0055077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A wide pore channel activity that enables the transport of a solute across a membrane via a gap junction hemi-channel. Two gap junction hemi-channels coupled together form a complete gap junction.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wide pore channel activity","termid":"GO:0022829"},{"relation_name":"part_of","term_name":"gap junction channel activity","termid":"GO:0005243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"part_of","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"part_of","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"gap junction hemi-channel activity","synonyms":[{"name":"connexon channel activity","type":"exact"}],"termid":"GO:0055077"}


id: PBO:0059952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 38","termid":"PBO:0059952"}


id: PBO:0031792
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_cell_cycle_phase","termid":"PBO:0031792"}


id: PBO:0079793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member A1 complex locus","termid":"PBO:0079793"}


id: PBO:0051844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iroquois homeobox 1","termid":"PBO:0051844"}


id: FYPO:0002231
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that are curved along the long axis. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, curved cells (obsolete FYPO:0002231)","synonyms":[{"name":"inviable microcolony, curved vegetative cells","type":"exact"}],"termid":"FYPO:0002231"}


id: PBO:0079480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taxilin beta","termid":"PBO:0079480"}


id: PBO:0077092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tigger transposable element derived 7","termid":"PBO:0077092"}


id: PBO:0077030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine synthase like 1","termid":"PBO:0077030"}


id: PBO:0004465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2-associated protein (predicted)","termid":"PBO:0004465"}


id: PBO:0063575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline and glutamate rich with coiled coil 1","termid":"PBO:0063575"}


id: PBO:0086491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative permease; member of the allantoate transporter subfamily of the major facilitator superfamily; mutation confers resistance to ethionine sulfoxide","termid":"PBO:0086491"}


id: MONDO:0005457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute stress reaction (obsolete MONDO:0005457)","termid":"MONDO:0005457","xrefs":{"Monarch":{"xref_id":"0005457"}}}


id: MONDO:0043101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypothalamic dysfunction refers to a condition in which the hypothalamus is not working properly. The hypothalamus produces hormones that control body temperature, hunger, moods, release of hormones from many glands such as the pituitary gland, sex drive, sleep, and thirst. The signs and symptoms patients have vary depending on the hormones missing. A number of different causes including anorexia, bleeding, genetic disorder, tumors, and more have been linked to hypothalamic dysfunction. Treatment depends on the cause of the hypothalamic dysfunction.","definition_xrefs":["GARD:0002932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypothalamic disorder","termid":"MONDO:0002150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypothalamic dysfunction","secondary_identifiers":["UMLS:C0751230","MEDGEN:155833","SCTID:111568001"],"synonyms":[{"name":"hypothalamic dysfunction","type":"exact"},{"name":"hypothalamic syndrome","type":"exact"}],"termid":"MONDO:0043101","xrefs":{"Monarch":{"xref_id":"0043101"}}}


id: MONDO:0003889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive transitional cell carcinoma of the bladder characterized by the presence of clear cells.","definition_xrefs":["NCIT:C39827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infiltrating bladder urothelial carcinoma","termid":"MONDO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"infiltrating bladder urothelial carcinoma, clear cell variant","secondary_identifiers":["UMLS:C1512737","DOID:6476","MEDGEN:268572"],"synonyms":[{"name":"clear cell variant infiltrating bladder urothelial carcinoma","type":"related"},{"name":"infiltrating bladder urothelial carcinoma, clear cell variant","type":"exact"}],"termid":"MONDO:0003889","xrefs":{"Monarch":{"xref_id":"0003889"}}}


id: MONDO:0008587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tracheobronchopathia osteochondroplastica (TO) is an idiopathic and benign disease of the large airways characterized by submucosal osteocartilaginous nodules presenting in the trachea with or without the involvement of the major bronchi.","definition_xrefs":["Orphanet:3348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tracheobronchopathia osteochondroplastica","secondary_identifiers":["icd11.foundation:1797446244","MEDGEN:854438","OMIM:189961","MESH:C536977","SCTID:54675009","GARD:5235","UMLS:C3887588"],"synonyms":[{"name":"cartilaginous or bony projections into the tracheobronchial lumen","type":"related"},{"name":"tracheobronchopathia osteochondroplastica","type":"exact"},{"name":"tracheobronchopathia osteoplastica","type":"related"},{"name":"tracheopathia osteoplastica","type":"exact"}],"termid":"MONDO:0008587","xrefs":{"Monarch":{"xref_id":"0008587"}}}


id: PBO:0028239
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus_during_meiotic_anaphase_II","termid":"PBO:0028239"}


id: FYPO:0001450
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to cold.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to stress during vegetative growth","termid":"FYPO:0000850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"resistance to cold","synonyms":[{"name":"increased growth during cellular response to cold","type":"exact"},{"name":"increased vegetative cell population growth during cellular response to cold","type":"exact"},{"name":"resistance to cold during mitotic cell cycle","type":"related"},{"name":"resistance to cold during vegetative growth","type":"exact"},{"name":"resistance to low temperature","type":"exact"},{"name":"resistant to cold","type":"exact"}],"termid":"FYPO:0001450"}


id: PBO:0029168
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_dTDP_level","termid":"PBO:0029168"}


id: GO:1904155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a DN2 thymocyte. A DN2 thymocyte is a CD4-,CD8- thymocyte that is also CD44+,CD25-.","definition_xrefs":["GO_REF:0000086","GOC:TermGenie","GOC:dph","PMID:25398325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DN2 thymocyte differentiation","termid":"GO:1904155"}


id: PBO:0088592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-binding protein-associated transcription initiation factor Mot1","termid":"PBO:0088592"}


id: PBO:0091500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane amino acid transmembrane transporter Per1","termid":"PBO:0091500"}


id: FYPO:0006846
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of protein measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased total protein level during vegetative growth","synonyms":[{"name":"decreased total protein accumulation during vegetative growth","type":"related"},{"name":"decreased total protein content during vegetative growth","type":"exact"},{"name":"decreased total protein level during mitotic cell cycle","type":"related"},{"name":"reduced total protein level during vegetative growth","type":"exact"}],"termid":"FYPO:0006846"}


id: PBO:0035805
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3_acetylation_during_vegetative_growth","termid":"PBO:0035805"}


id: PBO:0034414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_process_that_acts_on_population_of","termid":"PBO:0034414"}


id: PATO:0000298
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000298 not arrested value (obsolete PATO:0000298)","termid":"PATO:0000298"}


id: MONDO:0012067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited susceptibility to asthma in which the cause of the disease is a mutation in the NPSR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to asthma","termid":"MONDO:0010940"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma-related traits, susceptibility to, 2","secondary_identifiers":["UMLS:C1837811","OMIM:608584","MEDGEN:324885"],"synonyms":[{"name":"ASRT2","type":"related"},{"name":"NPSR1 inherited susceptibility to asthma","type":"exact"},{"name":"asthma, susceptibility to, 2","type":"exact"},{"name":"asthma-related traits, susceptibility to, 2","type":"exact"},{"name":"asthma-related traits, susceptibility to, type 2","type":"exact"},{"name":"inherited susceptibility to asthma caused by mutation in NPSR1","type":"exact"}],"termid":"MONDO:0012067","xrefs":{"Monarch":{"xref_id":"0012067"}}}


id: MONDO:0010652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked intellectual disability-seizures-psoriasis syndrome has been described in four male cousins. The mode of inheritance is thought to be X-linked recessive.","definition_xrefs":["Orphanet:3052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability-seizures-psoriasis syndrome","secondary_identifiers":["GARD:5238","MESH:C536978","SCTID:719810000","MEDGEN:501947","OMIM:309480","UMLS:C3501539"],"synonyms":[{"name":"Tranebjaerg Svejgaard syndrome","type":"related"},{"name":"Tranebjaerg-Svejgaard syndrome","type":"exact"},{"name":"X-linked intellectual disability - seizures - psoriasis","type":"related"},{"name":"X-linked intellectual disability associated with psoriasis","type":"related"},{"name":"X-linked mental retardation associated with psoriasis","type":"related"},{"name":"intellectual disability X-linked, Tranebjaerg type seizures and psoriasis","type":"related"},{"name":"intellectual disability and psoriasis","type":"related"},{"name":"mental retardation X-linked, Tranebjaerg type seizures and psoriasis","type":"related"},{"name":"mental retardation and psoriasis","type":"related"}],"termid":"MONDO:0010652","xrefs":{"Monarch":{"xref_id":"0010652"}}}


id: GO:0097692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of one methyl group to lysine at position 4 of the histone.","definition_xrefs":["GOC:jh2","PMID:26320581"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K4 monomethylation (obsolete GO:0097692)","termid":"GO:0097692"}


id: PBO:0083683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal SNARE related to mammalian syntaxin 8","termid":"PBO:0083683"}


id: GO:0045938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the duration or quality of sleep, a readily reversible state of reduced awareness and metabolic activity that occurs periodically in many animals.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of circadian rhythm","termid":"GO:0042753"},{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, sleep","termid":"GO:0045187"},{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"positively_regulates","term_name":"circadian sleep/wake cycle, sleep","termid":"GO:0050802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of circadian sleep/wake cycle, sleep","synonyms":[{"name":"activation of circadian sleep/wake cycle, sleep","type":"narrow"},{"name":"positive regulation of sleep","type":"exact"},{"name":"stimulation of circadian sleep/wake cycle, sleep","type":"narrow"},{"name":"up regulation of circadian sleep/wake cycle, sleep","type":"exact"},{"name":"up-regulation of circadian sleep/wake cycle, sleep","type":"exact"},{"name":"upregulation of circadian sleep/wake cycle, sleep","type":"exact"}],"termid":"GO:0045938"}


id: MONDO:0006432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wilms tumor of the kidney characterized by the predominance of the mesenchymal component.","definition_xrefs":["NCIT:C9148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney Wilms tumor","termid":"MONDO:0019004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"stromal predominant kidney Wilms tumor","secondary_identifiers":["MEDGEN:83529","UMLS:C0279610","DOID:5191"],"synonyms":[{"name":"stromal predominant Wilms tumor","type":"exact"},{"name":"stromal predominant Wilms tumour","type":"exact"},{"name":"stromal predominant kidney Wilms tumor","type":"exact"},{"name":"stromal predominant kidney Wilms' tumor","type":"exact"},{"name":"stromal predominant kidney Wilms' tumour","type":"exact"},{"name":"stromal predominant kidney adenosarcoma","type":"exact"},{"name":"stromal predominant nephroblastoma","type":"exact"},{"name":"stromal predominant renal Wilm's tumor","type":"exact"},{"name":"stromal predominant renal Wilm's tumour","type":"exact"},{"name":"stromal predominant renal Wilms tumor","type":"exact"},{"name":"stromal predominant renal Wilms tumour","type":"exact"},{"name":"stromal predominant renal Wilms' tumor","type":"exact"},{"name":"stromal predominant renal Wilms' tumour","type":"exact"},{"name":"stromal predominant renal adenosarcoma","type":"exact"}],"termid":"MONDO:0006432","xrefs":{"Monarch":{"xref_id":"0006432"}}}


id: PBO:0003390
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.21","termid":"PBO:0003390"}


id: PBO:0111831
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain protein","termid":"PBO:0111831"}


id: PBO:0116859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histones H3-H4 binding DNAJ domain protein, DNAJC9 family, Djc9","termid":"PBO:0116859"}


id: GO:0016268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc or Core 1) to form the core 2 O-glycan structure, GlcNAc-beta-(1->6)[Gal-beta-(1->3)]-GalNAc.","definition_xrefs":["PMID:10580130","GOC:pr","PMID:33775405","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycan processing","termid":"GO:0016266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"core 2 O-glycan biosynthetic process","synonyms":[{"name":"O-glycan processing, core 2","type":"exact"},{"name":"core 2 O-glycan biosynthesis","type":"exact"}],"termid":"GO:0016268"}


id: MONDO:0017510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"adactyly of foot","termid":"MONDO:0018563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"adactyly of foot, bilateral","secondary_identifiers":["UMLS:C5395377","MEDGEN:1718340","Orphanet:295118"],"synonyms":[{"name":"congenital absence of toes, bilateral","type":"exact"}],"termid":"MONDO:0017510","xrefs":{"Monarch":{"xref_id":"0017510"}}}


id: MONDO:0006279
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A rare, aggressive, poorly differentiated, non-small cell lung carcinoma characterized by the presence of a sarcomatoid component often associated with giant cell differentiation. There is a male to female ratio of 4:1. Clinical symptoms include cough, hemoptysis, chest pain, progressive dyspnea and fever secondary to recurrent pneumonia. Cigarette smoking is a major risk factor.","definition_xrefs":["NCIT:C45540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung large cell carcinoma","termid":"MONDO:0003050"},{"relation_name":"is_a","term_name":"sarcomatoid carcinoma","termid":"MONDO:0006406"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung sarcomatoid carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080777","UMLS:C1708781","MEDGEN:353871","EFO:1000336","ONCOTREE:SARCL","SCTID:707460002","ICD9:162.9"],"synonyms":[{"name":"lung sarcomatoid carcinoma","type":"exact"},{"name":"sarcomatoid carcinoma of the lung","type":"related"}],"termid":"MONDO:0006279","terms_by_termid":{"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0006279"}}}


id: GO:0032285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a non-myelinating glial cell membrane closes around an axon.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon ensheathment","termid":"GO:0008366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"non-myelinated axon ensheathment","synonyms":[{"name":"ensheathment of non-myelinated axons","type":"exact"}],"termid":"GO:0032285"}


id: GO:0072563
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A blood microparticle that is derived from, and contains membrane receptors as well as other proteins characteristic of, an endothelial cell.","definition_xrefs":["GOC:BHF","GOC:mah","PMID:16373184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood microparticle","termid":"GO:0072562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"endothelial microparticle","termid":"GO:0072563"}


id: PBO:0051092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 3","termid":"PBO:0051092"}


id: PBO:0076895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 49","termid":"PBO:0076895"}


id: PBO:0067856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 158","termid":"PBO:0067856"}


id: MONDO:1010943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mycosis fungoides that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine cutaneous t-cell lymphoma","termid":"MONDO:0700169"},{"relation_name":"is_a","term_name":"mycosis fungoides, non-human animal","termid":"MONDO:1010211"},{"relation_name":"is_a","term_name":"non-hodgkin lymphoma, dog","termid":"MONDO:1010948"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mycosis fungoides, dog","secondary_identifiers":["OMIA:001109-9615"],"termid":"MONDO:1010943","xrefs":{"Monarch":{"xref_id":"1010943"}}}


id: GO:0046187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acetaldehyde, a colorless, flammable liquid intermediate in the metabolism of alcohol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetaldehyde metabolic process","termid":"GO:0006117"},{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetaldehyde catabolic process","synonyms":[{"name":"acetaldehyde breakdown","type":"exact"},{"name":"acetaldehyde catabolism","type":"exact"},{"name":"acetaldehyde degradation","type":"exact"}],"termid":"GO:0046187"}


id: PBO:0063016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAGE family member 4","termid":"PBO:0063016"}


id: FYPO:0002086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more exocytic vesicles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicles present in increased numbers","termid":"FYPO:0003416"},{"relation_name":"output_of","term_name":"abnormal exocytosis during vegetative growth","termid":"FYPO:0002089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"exocytic vesicles present in increased numbers","synonyms":[{"name":"accumulation of exocytic vesicles","type":"related"},{"name":"additional exocytic vesicles present","type":"exact"},{"name":"exocytic vesicles present in greater numbers","type":"exact"},{"name":"exocytic vesicles present in increased numbers during mitotic cell cycle","type":"related"},{"name":"exocytic vesicles present in increased numbers during vegetative growth","type":"exact"},{"name":"exocytotic vesicles present in increased numbers","type":"exact"},{"name":"extra exocytic vesicles","type":"exact"},{"name":"post-Golgi secretory vesicles present in increased numbers","type":"related"}],"termid":"FYPO:0002086"}


id: PBO:0086335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proton:glutathione antiporter; localized to the vacuolar and plasma membranes; imports glutathione from the vacuole and exports it through the plasma membrane; has a role in resistance to oxidative stress and modulation of the PKA pathway; GEX1 has a paralog, GEX2, that arose from a segmental duplication","termid":"PBO:0086335"}


id: PBO:0055970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRR binding FLII interacting protein 2","termid":"PBO:0055970"}


id: PBO:0046028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2B subunit epsilon","termid":"PBO:0046028"}


id: MONDO:0012267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A holoprosencephaly that has material basis in variation in the chromosome region 14q13.","definition_xrefs":["DOID:0110879","PMID:15820313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"holoprosencephaly 8","secondary_identifiers":["UMLS:C1836254","MESH:C563723","OMIM:609408","MEDGEN:322873"],"synonyms":[{"name":"HPE8","type":"exact"},{"name":"holoprosencephaly 8","type":"exact"},{"name":"holoprosencephaly type 8","type":"exact"}],"termid":"MONDO:0012267","xrefs":{"Monarch":{"xref_id":"0012267"}}}


id: PBO:0060630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCK associated protein 5 like","termid":"PBO:0060630"}


id: PBO:0002612
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae YJR070C","termid":"PBO:0002612"}


id: GO:0045066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized T cell acquires specialized features of a regulatory T cell. Regulatory T cells control or suppress immune responses through a variety of mechanisms and subsets include the CD4+CD25+ cell type as well as certain CD8+ cell types.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulatory T cell differentiation","synonyms":[{"name":"regulatory T cell development","type":"related"},{"name":"regulatory T lymphocyte differentiation","type":"exact"},{"name":"regulatory T-cell differentiation","type":"exact"},{"name":"regulatory T-lymphocyte differentiation","type":"exact"},{"name":"suppressor T cell differentiation","type":"exact"},{"name":"suppressor T lymphocyte differentiation","type":"exact"},{"name":"suppressor T-cell differentiation","type":"exact"},{"name":"suppressor T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0045066"}


id: GO:0044764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that is carried out at the cellular level which involves another organism of the same or different species.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism cellular process (obsolete GO:0044764)","termid":"GO:0044764"}


id: MONDO:0010016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any sclerosteosis in which the cause of the disease is a mutation in the SOST gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sclerosteosis","termid":"MONDO:0017838"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sclerosteosis 1","secondary_identifiers":["DOID:0060756","OMIM:269500","GARD:15233","UMLS:C4551483","MEDGEN:1642815"],"synonyms":[{"name":"SOST","type":"related"},{"name":"SOST sclerosteosis","type":"exact"},{"name":"SOST1","type":"exact"},{"name":"cortical hyperostosis with syndactyly","type":"related"},{"name":"sclerosteosis 1","type":"exact"},{"name":"sclerosteosis caused by mutation in SOST","type":"exact"},{"name":"sclerosteosis type 1","type":"exact"}],"termid":"MONDO:0010016","xrefs":{"Monarch":{"xref_id":"0010016"}}}


id: GO:0045498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sex comb over time, from its formation to the mature structure. The sex combs are the male specific chaetae located on the prothoracic tarsal segment of the prothoracic leg.","direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sex comb development","termid":"GO:0045498"}


id: MONDO:0021131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymal tumor affecting the frontal lobe of the brain.","definition_xrefs":["NCIT:C131573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontal lobe neoplasm","termid":"MONDO:0001421"},{"relation_name":"is_a","term_name":"cerebral hemisphere cancer","termid":"MONDO:0002731"},{"relation_name":"is_a","term_name":"ependymal tumor of brain","termid":"MONDO:0004245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"frontal lobe ependymal tumor","secondary_identifiers":["UMLS:C4330009","MEDGEN:1391114"],"synonyms":[{"name":"ependymal tumor of frontal lobe","type":"exact"},{"name":"ependymal tumour of frontal lobe","type":"exact"},{"name":"frontal lobe ependymal tumor","type":"exact"}],"termid":"MONDO:0021131","xrefs":{"Monarch":{"xref_id":"0021131"}}}


id: GO:0034468
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a glycosome.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal matrix","termid":"GO:0005782"},{"relation_name":"part_of","term_name":"glycosome","termid":"GO:0020015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005777"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005777","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"glycosome lumen","termid":"GO:0034468"}


id: MONDO:1011772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hoof wall separation syndrome, non-human animal","secondary_identifiers":["OMIA:001897"],"termid":"MONDO:1011772","xrefs":{"Monarch":{"xref_id":"1011772"}}}


id: PR:P31411
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vma2 gene.","definition_xrefs":["UniProtKB:P31411","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.05c","synonyms":[{"name":"Spom972h-vma2","type":"exact"},{"name":"V-ATPase 57 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"V-ATPase subunit B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit B (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P31411"}


id: PR:O94296
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC887.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid-transporting ATPase C887.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.12","synonyms":[{"name":"Spom972h-SPBC887.12","type":"exact"}],"termid":"PR:O94296"}


id: PBO:0038611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA binding domain containing 7","termid":"PBO:0038611"}


id: PBO:0066456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 9, pseudogene","termid":"PBO:0066456"}


id: MONDO:0012544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly-syndactyly, Zhao type is a recently described syndrome associating a brachydactyly type A4 (short middle phalanges of the 2nd and 5th fingers and absence of middle phalanges of the 2nd to 5th toes) and a syndactyly of the 2nd and 3rd toes. Metacarpals and metatarsals anomalies are common.","definition_xrefs":["Orphanet:93409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal genetic disease","termid":"MONDO:0000429"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly-syndactyly syndrome","secondary_identifiers":["DOID:0050689","GARD:16821","MEDGEN:377836","MESH:C565193","UMLS:C1853137","OMIM:610713"],"synonyms":[{"name":"BDSD","type":"related"},{"name":"Bdsd","type":"related"},{"name":"brachydactyly-syndactyly syndrome","type":"exact"},{"name":"brachydactyly-syndactyly, Zhao type","type":"related"},{"name":"brachydactyly-syndactyly-oligodactyly syndrome","type":"related"}],"termid":"MONDO:0012544","xrefs":{"Monarch":{"xref_id":"0012544"}}}


id: FYPO:0007424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which chromosomal truncations occur more frequently than in wild type cells.","definition_xrefs":["PMID:32355220","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased gross chromosomal rearrangement","termid":"FYPO:0001740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased chromosomal truncation","synonyms":[{"name":"increased chromosomal truncation during mitotic cell cycle","type":"related"},{"name":"increased chromosomal truncation during vegetative growth","type":"exact"}],"termid":"FYPO:0007424"}


id: PBO:0055688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIPT2 antisense RNA 1","termid":"PBO:0055688"}


id: MONDO:1011080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, domestic cat","secondary_identifiers":["OMIA:001033-9685"],"termid":"MONDO:1011080","xrefs":{"Monarch":{"xref_id":"1011080"}}}


id: GO:0048055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the R2 and R5 pair of photoreceptors in the eye over time, from their formation to the mature structures. R2 and R5 are paired photoreceptors that contribute to the outer rhabdomeres. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor development","termid":"GO:0042051"},{"relation_name":"part_of","term_name":"R2/R5 cell differentiation","termid":"GO:0048054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R2/R5 development","termid":"GO:0048055"}


id: PBO:0066287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member M, pseudogene","termid":"PBO:0066287"}


id: PBO:0003266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit Mrp21 (predicted)","termid":"PBO:0003266"}


id: PBO:0070138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 52 pseudogene","termid":"PBO:0070138"}


id: PBO:0084810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; localized to the mitochondrial outer membrane","termid":"PBO:0084810"}


id: PBO:0006268
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_product_form_id","termid":"PBO:0006268"}


id: PBO:0091328
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar Protein Sorting","termid":"PBO:0091328"}


id: PBO:0002867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine phosphatase Pyp1","termid":"PBO:0002867"}


id: GO:0032414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of an ion transporter.","definition_xrefs":["GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transporter activity","termid":"GO:0032411"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transmembrane transport","termid":"GO:0034767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of ion transmembrane transporter activity","synonyms":[{"name":"activation of ion transporter activity","type":"narrow"},{"name":"positive regulation of ion transporter activity","type":"exact"},{"name":"stimulation of ion transporter activity","type":"narrow"},{"name":"up regulation of ion transporter activity","type":"exact"},{"name":"up-regulation of ion transporter activity","type":"exact"},{"name":"upregulation of ion transporter activity","type":"exact"}],"termid":"GO:0032414"}


id: MONDO:0100392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(11;17). (A cytogenetic abnormality that involves a translocation between chromosomes 11 and 17.)","definition_xrefs":["NCIT:C175582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia, t(11;17)","synonyms":[{"name":"AML, t(11;17)","type":"exact"}],"termid":"MONDO:0100392","xrefs":{"Monarch":{"xref_id":"0100392"}}}


id: PR:O13741
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein 34 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR24011:SF57","PRO:DNx","OMA:SCHPO01463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.06c","secondary_identifiers":["UniProtKB:O13741"],"synonyms":[{"name":"Spom972h-RBM34","type":"exact"}],"termid":"PR:O13741"}


id: MONDO:0011836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"thyroid gland follicular carcinoma","termid":"MONDO:0005034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid Hurthle cell carcinoma","secondary_identifiers":["OMIM:607464","MEDGEN:196672","DOID:8161","GARD:9428","MESH:C536913","ONCOTREE:THHC","SCTID:423158009","NCIT:C4946","UMLS:C0749424"],"synonyms":[{"name":"Hurthle cell carcinoma of the thyroid","type":"exact"},{"name":"Hurthle cell carcinoma of the thyroid gland","type":"exact"},{"name":"Hurthle cell carcinoma of thyroid","type":"exact"},{"name":"Hurthle cell carcinoma of thyroid gland","type":"exact"},{"name":"Hurthle cell thyroid cancer","type":"related"},{"name":"Hurthle cell thyroid gland carcinoma","type":"exact"},{"name":"Hurthle cell thyroid neoplasia","type":"related"},{"name":"follicular thyroid cancer, Hurthle cell type","type":"related"},{"name":"oncocytic carcinoma of the thyroid","type":"exact"},{"name":"oncocytic carcinoma of thyroid","type":"exact"},{"name":"thyroid Hurthle cell carcinoma","type":"exact"},{"name":"thyroid cancer, Hurthle cell","type":"related"},{"name":"thyroid cancer, follicular, Hurthle cell type","type":"related"},{"name":"thyroid carcinoma, Hurthle cell","type":"exact"},{"name":"thyroid gland Hurthle cell carcinoma","type":"exact"},{"name":"thyroid gland oncocytic follicular carcinoma","type":"exact"},{"name":"thyroid oncocytic carcinoma","type":"exact"}],"termid":"MONDO:0011836","xrefs":{"Monarch":{"xref_id":"0011836"}}}


id: MONDO:1010857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Krabbe disease that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Krabbe disease, non-human animal","termid":"MONDO:1010170"},{"relation_name":"is_a","term_name":"leukodystrophy, sheep","termid":"MONDO:1011006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Krabbe disease, sheep","secondary_identifiers":["OMIA:000578-9940"],"termid":"MONDO:1010857","xrefs":{"Monarch":{"xref_id":"1010857"}}}


id: PBO:0055585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3021","termid":"PBO:0055585"}


id: PBO:0066852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 152","termid":"PBO:0066852"}


id: FYPO:0002609
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a lower extent than normal at centromeric outer repeat regions. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H2A phosphorylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"decreased histone H2A phosphorylation at centromere otr during vegetative growth","type":"exact"},{"name":"decreased histone H2A phosphorylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased histone H2A phosphorylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"decreased histone H2A phosphorylation at pericentric region during vegetative growth","type":"related"},{"name":"decreased histone H2A phosphorylation at pericentromeric region during vegetative growth","type":"related"},{"name":"reduced histone H2A phosphorylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002609"}


id: GO:1903521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mammary gland involution.","definition_xrefs":["GOC:dph","GO_REF:0000058","PMID:23164222","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tissue remodeling","termid":"GO:0034105"},{"relation_name":"is_a","term_name":"regulation of mammary gland involution","termid":"GO:1903519"},{"relation_name":"positively_regulates","term_name":"mammary gland involution","termid":"GO:0060056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mammary gland involution","synonyms":[{"name":"activation of mammary gland involution","type":"narrow"},{"name":"up regulation of mammary gland involution","type":"exact"},{"name":"up-regulation of mammary gland involution","type":"exact"},{"name":"upregulation of mammary gland involution","type":"exact"}],"termid":"GO:1903521"}


id: PBO:0117406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 2","termid":"PBO:0117406"}


id: PBO:0077090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tigger transposable element derived 5","termid":"PBO:0077090"}


id: GO:0009068
data:
  {"annotated_genes":["SJAG_02450","SJAG_00714"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[73883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of amino acids of the aspartate family, comprising asparagine, aspartate, lysine, methionine and threonine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"proteinogenic amino acid catabolic process","termid":"GO:0170040"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00714":null,"SJAG_02450":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"aspartate family amino acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"aspartate family amino acid breakdown","type":"exact"},{"name":"aspartate family amino acid catabolism","type":"exact"},{"name":"aspartate family amino acid degradation","type":"exact"}],"termid":"GO:0009068","terms_by_termid":{"GO:0006533":null,"GO:0006567":null}}


id: GO:0047150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-homocysteine + glycine betaine = N,N-dimethylglycine + L-methionine.","definition_xrefs":["RHEA:22336","EC:2.1.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"betaine-homocysteine S-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02821","MetaCyc:2.1.1.5-RXN","Reactome:R-HSA-1614654"],"synonyms":[{"name":"betaine-homocysteine methyltransferase activity","type":"related"},{"name":"betaine-homocysteine transmethylase activity","type":"related"},{"name":"trimethylammonioacetate:L-homocysteine S-methyltransferase activity","type":"related"}],"termid":"GO:0047150"}


id: GO:0042144
data:
  {"annotated_genes":["SJAG_04909","SJAG_01072","SJAG_03137","SJAG_05194","SJAG_03072","SJAG_02384","SJAG_01299","SJAG_00029","SJAG_02433","SJAG_00380","SJAG_00330","SJAG_04966","SJAG_01598","SJAG_03386","SJAG_03915"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72916,93049,93177,101884,102180,102678,103050,106583,110246,111403,118835],"is_not":false,"summary":null,"term":"GO:0042144"},{"annotations":[103386],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0061192"},{"annotations":[99538,112243],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0061191"},{"annotations":[99297],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032889"}]},"cv_name":"biological_process","definition":"The fusion of two vacuole membranes to form a single vacuole.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole fusion","termid":"GO:0097576"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00330":null,"SJAG_00380":null,"SJAG_01072":null,"SJAG_01299":null,"SJAG_01598":null,"SJAG_02384":null,"SJAG_02433":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03386":null,"SJAG_03915":null,"SJAG_04909":null,"SJAG_04966":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vacuole fusion, non-autophagic","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0042145"],"synonyms":[{"name":"homotypic vacuole fusion","type":"exact"},{"name":"homotypic vacuole fusion (non-autophagic)","type":"exact"},{"name":"homotypic vacuole fusion, non-autophagic","type":"exact"},{"name":"vacuole fusion (non-autophagic)","type":"exact"}],"termid":"GO:0042144","terms_by_termid":{"GO:0032889":null,"GO:0042144":null,"GO:0061191":null,"GO:0061192":null}}


id: PBO:0071892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 30","termid":"PBO:0071892"}


id: PBO:0041844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAS1 domain containing 1","termid":"PBO:0041844"}


id: PBO:0061716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUTM2A antisense RNA 1","termid":"PBO:0061716"}


id: GO:0007157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules","synonyms":[{"name":"agglutination","type":"related"}],"termid":"GO:0007157"}


id: MONDO:0012822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"colorectal cancer","termid":"MONDO:0005575"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer, susceptibility to, 6","secondary_identifiers":["OMIM:612231","UMLS:C2677121","MEDGEN:436865"],"synonyms":[{"name":"CRCS6","type":"exact"},{"name":"colorectal cancer, susceptibility to, 6","type":"exact"},{"name":"colorectal cancer, susceptibility to, on chromosome 8Q23","type":"related"}],"termid":"MONDO:0012822","xrefs":{"Monarch":{"xref_id":"0012822"}}}


id: MONDO:0958076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare form of spina bifida/open neural tube defect (NTD) chacterized by absence of a cystic component, dysplastic meninges and neural placode exposed through a defect in the posterior vertebral arches (spina bifida) that are contiguous with surrounding skin. The placode is at or below the skin plane and is typically associated with a Chiari II malformation. It is usually isolated or rarely associated with split cord malformation.","definition_xrefs":["Orphanet:645398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida aperta","termid":"MONDO:0017062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"myeloschisis","secondary_identifiers":["UMLS:C0266507","icd11.foundation:1547705800","MEDGEN:539965"],"termid":"MONDO:0958076","xrefs":{"Monarch":{"xref_id":"0958076"}}}


id: _global:non_functional_homolog_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A relationship between a pseudogenic feature and its functional ancestor.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homologous_to","termid":"_global:homologous_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_functional_homolog_of","termid":"_global:non_functional_homolog_of"}


id: GO:1904212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of iodide transmembrane transport.","definition_xrefs":["GO_REF:0000058","PMID:20392814","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inorganic anion transmembrane transport","termid":"GO:1903795"},{"relation_name":"is_a","term_name":"regulation of monoatomic anion transmembrane transport","termid":"GO:1903959"},{"relation_name":"is_a","term_name":"regulation of iodide transport","termid":"GO:1904201"},{"relation_name":"regulates","term_name":"iodide transmembrane transport","termid":"GO:1904200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of iodide transmembrane transport","termid":"GO:1904212"}


id: MONDO:0006212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of hyperplasia that is characterized by a marked thickening of the urinary tract epithelium. There is no evidence of cytologic atypia. -- 2003","definition_xrefs":["NCIT:C27878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urothelial hyperplasia","termid":"MONDO:0024483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flat urothelial hyperplasia","secondary_identifiers":["UMLS:C1333621","MEDGEN:272633","EFO:1000259"],"synonyms":[{"name":"flat urothelial hyperplasia","type":"exact"}],"termid":"MONDO:0006212","xrefs":{"Monarch":{"xref_id":"0006212"}}}


id: PBO:0029012
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromosome_during_vegetative_growth","termid":"PBO:0029012"}


id: GO:0016278
data:
  {"annotated_genes":["SJAG_02873","SJAG_03487","SJAG_01193","SJAG_04159","SJAG_03630","SJAG_03228","SJAG_01079","SJAG_02692","SJAG_01536","SJAG_01146","SJAG_00769","SJAG_04574","SJAG_01482","SJAG_01425","SJAG_03869"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140954"},{"annotations":[80380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046975"},{"annotations":[65287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140955"},{"annotations":[58245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062122"},{"annotations":[80379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042800"},{"annotations":[58964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140999"},{"annotations":[112472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140948"},{"annotations":[63706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140949"},{"annotations":[112474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140947"},{"annotations":[119029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140943"},{"annotations":[71785,80203,79430,76802,64929,78137,75319,118830,73784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016279"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the epsilon-amino group of a lysine residue.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00769":null,"SJAG_01079":null,"SJAG_01146":null,"SJAG_01193":null,"SJAG_01425":null,"SJAG_01482":null,"SJAG_01536":null,"SJAG_02692":null,"SJAG_02873":null,"SJAG_03228":null,"SJAG_03487":null,"SJAG_03630":null,"SJAG_03869":null,"SJAG_04159":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"lysine N-methyltransferase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6805730","Reactome:R-HSA-3222237","Reactome:R-HSA-6805740","Reactome:R-HSA-6805755"],"termid":"GO:0016278","terms_by_termid":{"GO:0016279":null,"GO:0042800":null,"GO:0046975":null,"GO:0062122":null,"GO:0140943":null,"GO:0140947":null,"GO:0140948":null,"GO:0140949":null,"GO:0140954":null,"GO:0140955":null,"GO:0140999":null}}


id: PBO:0070848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 27","termid":"PBO:0070848"}


id: GO:0048759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a vessel member cell. A vessel member cell is one of the components of a vessel in the xylem. It is a dead cell with the wall between adjacent members being variously perforated and the walls that persist variously thickened.","definition_xrefs":["PO:0002003","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tracheary element differentiation","termid":"GO:1905177"},{"relation_name":"part_of","term_name":"xylem development","termid":"GO:0010089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xylem vessel member cell differentiation","synonyms":[{"name":"vessel element cell differentiation","type":"broad"},{"name":"vessel member cell differentiation","type":"broad"}],"termid":"GO:0048759"}


id: GO:0017134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a fibroblast growth factor.","definition_xrefs":["PMID:9806903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"fibroblast growth factor binding","secondary_identifiers":["GO:0048604","GO:0048605","GO:0048603","GO:0048606","GO:0048607","GO:0048602"],"synonyms":[{"name":"FGF 1 binding","type":"narrow"},{"name":"FGF 2 binding","type":"narrow"},{"name":"FGF 3 binding","type":"narrow"},{"name":"FGF 4 binding","type":"narrow"},{"name":"FGF 5 binding","type":"narrow"},{"name":"FGF 6 binding","type":"narrow"},{"name":"FGF binding","type":"exact"},{"name":"fibroblast growth factor 1 binding","type":"narrow"},{"name":"fibroblast growth factor 2 binding","type":"narrow"},{"name":"fibroblast growth factor 3 binding","type":"narrow"},{"name":"fibroblast growth factor 4 binding","type":"narrow"},{"name":"fibroblast growth factor 5 binding","type":"narrow"},{"name":"fibroblast growth factor 6 binding","type":"narrow"}],"termid":"GO:0017134"}


id: PBO:0117115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFSWAP antisense RNA 1","termid":"PBO:0117115"}


id: MONDO:0035340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disorder with hirschsprung disease as a major feature (obsolete MONDO:0035340)","secondary_identifiers":["Orphanet:557866"],"termid":"MONDO:0035340","xrefs":{"Monarch":{"xref_id":"0035340"}}}


id: MONDO:0007525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited connective tissue disorder that is caused by defects in a protein called collagen. Common symptoms include severe joint hypermobility ; congenital hip dislocation; fragile, hyperextensible skin; hypotonia ; and kyphoscoliosis (kyphosis and scoliosis). EDS, arthrochalasia type is caused by changes (mutations) in the COL1A1 gene or the COL1A2 gene and is inherited in an autosomal dominant manner. Treatment and management is focused on preventing serious complications and relieving associated signs and symptoms.","definition_xrefs":["GARD:0002084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"COL1A1-related Ehlers-Danlos syndrome","termid":"MONDO:0100599"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, arthrochalasia type","secondary_identifiers":["DOID:0080727","NCIT:C125701","Orphanet:1899","NANDO:1200650","NANDO:2201260","UMLS:C4551623","MEDGEN:1645042","SCTID:4170004","MESH:C562625","OMIM:130060","GARD:2084"],"synonyms":[{"name":"AEDS","type":"related"},{"name":"EDS 7A","type":"narrow"},{"name":"EDS 7B","type":"narrow"},{"name":"EDS VII","type":"exact"},{"name":"EDS VII, mutant procollagen type","type":"related"},{"name":"EDS7A (formerly)","type":"related"},{"name":"EDSARTH1","type":"related"},{"name":"Ehlers-Danlos syndrome type 7","type":"exact"},{"name":"Ehlers-Danlos syndrome type 7A (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome, arthrochalasia type","type":"exact"},{"name":"Ehlers-Danlos syndrome, arthrochalasia type, 1","type":"related"},{"name":"Ehlers-Danlos syndrome, type VII","type":"exact"},{"name":"Ehlers-Danlos syndrome, type VII, autosomal dominant","type":"related"},{"name":"Ehlers-Danlos syndrome, type VIIA, autosomal dominant","type":"related"},{"name":"arthrochalasia EDS","type":"related"},{"name":"arthrochalasia Ehlers-Danlos syndrome","type":"related"},{"name":"arthrochalasis multiplex congenita","type":"related"}],"termid":"MONDO:0007525","xrefs":{"Monarch":{"xref_id":"0007525"}}}


id: GO:0071047
data:
  {"annotated_genes":["SJAG_01818","SJAG_04321","SJAG_01191","SJAG_04818","SJAG_04153","SJAG_00854","SJAG_04824","SJAG_04006","SJAG_04084","SJAG_03745","SJAG_03179","SJAG_01521"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94127,117888,117448,106340,108424,107210,97817,120332,94958,109417,99154,104013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071042"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a messenger RNA (mRNA) molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target mRNA.","definition_xrefs":["GOC:krc","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA catabolic process","termid":"GO:0006402"},{"relation_name":"is_a","term_name":"mRNA destabilization","termid":"GO:0061157"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"polyadenylation-dependent mRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"poly(A)-dependent mRNA catabolic process","type":"related"}],"termid":"GO:0071047","terms_by_termid":{"GO:0071042":null}}


id: GO:0035910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the ascending aorta are generated and organized. The ascending aorta is the portion of the aorta in a two-pass circulatory system that lies between the heart and the arch of aorta. In a two-pass circulatory system blood passes twice through the heart to supply the body once.","definition_xrefs":["Wikipedia:Ascending_aorta","UBERON:0001496","GOC:dgh","MA:0002570","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"ascending aorta development","termid":"GO:0035905"},{"relation_name":"part_of","term_name":"aorta morphogenesis","termid":"GO:0035909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ascending aorta morphogenesis","termid":"GO:0035910"}


id: PBO:0045119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMRT like family B with proline rich C-terminal 1","termid":"PBO:0045119"}


id: GO:1900099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of plasma cell differentiation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of B cell differentiation","termid":"GO:0045578"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"is_a","term_name":"regulation of plasma cell differentiation","termid":"GO:1900098"},{"relation_name":"negatively_regulates","term_name":"plasma cell differentiation","termid":"GO:0002317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of plasma cell differentiation","synonyms":[{"name":"down regulation of plasma cell development","type":"related"},{"name":"down regulation of plasma cell differentiation","type":"exact"},{"name":"down-regulation of plasma cell development","type":"related"},{"name":"down-regulation of plasma cell differentiation","type":"exact"},{"name":"downregulation of plasma cell development","type":"related"},{"name":"downregulation of plasma cell differentiation","type":"exact"},{"name":"inhibition of plasma cell development","type":"related"},{"name":"inhibition of plasma cell differentiation","type":"narrow"},{"name":"negative regulation of plasma cell development","type":"related"}],"termid":"GO:1900099"}


id: GO:0033502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A homeostatic process involved in the maintenance of a steady state level of galactose within a cell.","definition_xrefs":["GOC:dph","GOC:mah","PMID:21621292","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular galactose homeostasis (obsolete GO:0033502)","synonyms":[{"name":"cell galactose homeostasis","type":"exact"},{"name":"cellular galactose homeostasis","type":"exact"}],"termid":"GO:0033502"}


id: PBO:0053863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1138","termid":"PBO:0053863"}


id: MONDO:0000775
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Immunologically mediated adverse reactions to medicinal substances used legally or illegally.","definition_xrefs":["MESH:D004342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic disease","termid":"MONDO:0005271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"drug allergy","secondary_identifiers":["EFO:0009482","DOID:0060500","MEDGEN:41663","UMLS:C0013182"],"synonyms":[{"name":"allergy of exposure to drug","type":"exact"},{"name":"exposure to drug allergic disease","type":"exact"}],"termid":"MONDO:0000775","xrefs":{"Monarch":{"xref_id":"0000775"}}}


id: GO:0018032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Addition of an amide group from a glycine to a protein amino acid.","definition_xrefs":["UniProtKB-KW:KW-0027"],"gene_count":0,"genotype_count":0,"name":"obsolete protein amidation (obsolete GO:0018032)","synonyms":[{"name":"protein amino acid amidation","type":"exact"}],"termid":"GO:0018032"}


id: GO:0070766
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains endobrevin (VAMP8), synaptobrevin 2 (VAMP2), alpha-SNAP, NSF, and syntaxin 4 (or orthologs thereof).","definition_xrefs":["PMID:8973549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"endobrevin-synaptobrevin 2-alpha-SNAP-NSF-syntaxin-4 complex","synonyms":[{"name":"SNARE complex (Stx4, Napa, Vamp3, Nsf, Vamp2)","type":"narrow"},{"name":"Stx4-Napa-Vamp3-Nsf-Vamp2 complex","type":"narrow"}],"termid":"GO:0070766"}


id: PBO:0087449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a complex that associates with actin filaments; forms a complex with Aim21p that inhibits barbed end F-actin assembly; elevates actin monomer pools to increase endocytotic efficiency and to regulate the distribution of actin between cables and patches; Aim21p/Tda2p forms a larger complex with actin capping proteins Cap1p and Cap2p; TcTex1-type dynein light chain family member; null mutant is sensitive to expression of the top1-T722A allele","termid":"PBO:0087449"}


id: SO:0002312
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An element that always exists within the promoter region of a prokaryotic gene.","definition_xrefs":["GREEKC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_promoter_element","termid":"SO:0002309"},{"relation_name":"part_of","term_name":"prokaryotic_promoter","termid":"SO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"core_prokaryotic_promoter_element","synonyms":[{"name":"core prokaryotic promoter element","type":"exact"},{"name":"general transcription factor binding site","type":"related"}],"termid":"SO:0002312"}


id: GO:0090697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Morphogenesis, during the post-embryonic phase, of a plant tissue or tissues that work together to perform a specific function or functions. Morphogenesis pertains to process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"is_a","term_name":"plant organ morphogenesis","termid":"GO:1905392"},{"relation_name":"part_of","term_name":"post-embryonic plant organ development","termid":"GO:0090696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic plant organ morphogenesis","termid":"GO:0090697"}


id: PBO:0086096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein proposed to be associated with the nuclear pore complex; null mutant is viable, displays elevated frequency of mitochondrial genome loss and is sensitive to freeze-thaw stress","termid":"PBO:0086096"}


id: MONDO:0008583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital benign lesion that occurs in the distal sternocleidomastoid muscle of infants. It is characterized by the presence of plump spindle cells, and collagenous stroma formation.","definition_xrefs":["NCIT:C4811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibromatosis","termid":"MONDO:0005031"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inherited torticollis","secondary_identifiers":["HP:0000473","OMIM:189600","GARD:4908","SCTID:70070008","MEDGEN:11859","UMLS:C0040485","SCTID:268240006","ICD9:723.5","MESH:C535425"],"synonyms":[{"name":"congenital muscular torticollis","type":"related"},{"name":"congenital sternomastoid torticollis","type":"related"},{"name":"congenital torticollis","type":"exact"},{"name":"congenital wry neck","type":"related"},{"name":"congenital wryneck","type":"related"},{"name":"contracture of sternocleidomastoid muscle","type":"related"},{"name":"familial spasmodic torticollis","type":"related"},{"name":"familial torticollis","type":"related"},{"name":"fibromatosis colli","type":"exact"},{"name":"inherited torticollis (disease)","type":"exact"},{"name":"torticollis","type":"exact"},{"name":"torticollis, congenital","type":"related"},{"name":"torticollis, familial","type":"related"}],"termid":"MONDO:0008583","xrefs":{"Monarch":{"xref_id":"0008583"}}}


id: GO:0010937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytoplasmic microtubule depolymerization.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule depolymerization","termid":"GO:0031114"},{"relation_name":"regulates","term_name":"cytoplasmic microtubule depolymerization","termid":"GO:0010938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"regulation of cytoplasmic microtubule depolymerization","termid":"GO:0010937"}


id: FYPO:0003603
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the first meiotic nuclear division is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal meiosis I","synonyms":[{"name":"abnormal first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003603"}


id: GO:0004901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with granulocyte macrophage colony-stimulating factor (GM-CSF) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"granulocyte macrophage colony-stimulating factor receptor activity","secondary_identifiers":["GO:0030525"],"synonyms":[{"name":"CSF-2 receptor activity","type":"exact"},{"name":"CSF2R","type":"related"},{"name":"GM-CSF receptor activity","type":"exact"},{"name":"GMC-SF receptor activity","type":"exact"},{"name":"granulocyte macrophage colony stimulating factor receptor activity","type":"exact"}],"termid":"GO:0004901"}


id: PBO:0017441
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_expression_of","termid":"PBO:0017441"}


id: PR:O74774
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An HBS1-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1 alpha-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25B2.01","secondary_identifiers":["UniProtKB:O74774"],"synonyms":[{"name":"SPBC25B2.01","type":"related"},{"name":"Spom972h-HBS1L","type":"exact"}],"termid":"PR:O74774"}


id: MONDO:0013082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, developmental defect during embryogenesis syndrome characterized by total or partial colonic aganglionosis associated with peripheral, usually multifocal, neuroblastic tumors (ganglioneuroblastoma, neuroblastoma, ganglioneuroma). Congenital central hypoventilation syndrome, with variable severity of respiratory compromise, cardiovascular and ophthalmologic symptoms, consistent with autonomic nervous system dysfunction, is occasionally associated.","definition_xrefs":["Orphanet:2151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"intestinal motility disease","termid":"MONDO:0021189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Hirschsprung disease-ganglioneuroblastoma syndrome","secondary_identifiers":["GARD:2695","MESH:C538119","UMLS:C5191058","MEDGEN:1683967"],"synonyms":[{"name":"Hirschsprung disease ganglioneuroblastoma","type":"related"},{"name":"neuroblastoma with Hirschsprung disease","type":"related"}],"termid":"MONDO:0013082","xrefs":{"Monarch":{"xref_id":"0013082"}}}


id: PBO:0073824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 3","termid":"PBO:0073824"}


id: MONDO:0018785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A self-limiting, rapidly growing, non-encapsulated benign neoplasm that arises from the soft tissues. It is characterized by the presence of plump spindle-shaped fibroblasts, multinucleated osteoclast-like giant cells, chronic inflammatory infiltrate, red blood cell extravasation, and high mitotic activity.","definition_xrefs":["NCIT:C3827"],"gene_count":0,"genotype_count":0,"name":"obsolete nodular fasciitis (obsolete MONDO:0018785)","termid":"MONDO:0018785","xrefs":{"Monarch":{"xref_id":"0018785"}}}


id: GO:0006559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-phenylalanine, 2-amino-3-phenylpropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-phenylalanine metabolic process","termid":"GO:0006558"},{"relation_name":"is_a","term_name":"aromatic amino acid family catabolic process","termid":"GO:0009074"},{"relation_name":"is_a","term_name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process","termid":"GO:1902222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-phenylalanine catabolic process","synonyms":[{"name":"L-phenylalanine breakdown","type":"exact"},{"name":"L-phenylalanine catabolism","type":"exact"},{"name":"L-phenylalanine degradation","type":"exact"},{"name":"phenylalanine catabolic process","type":"broad"},{"name":"phenylalanine catabolism","type":"broad"}],"termid":"GO:0006559"}


id: GO:0032536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates the size of a cell projection.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell projection size","termid":"GO:0032536"}


id: PBO:0065810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB3D, member RAS oncogene family","termid":"PBO:0065810"}


id: GO:0006056
data:
  {"annotated_genes":["SJAG_02519","SJAG_01021","SJAG_04906","SJAG_00816","SJAG_01276","SJAG_03082","SJAG_00598","SJAG_04770","SJAG_01264"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73768,76449,81121,89354,78748,79300,82219,79791,76578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000032"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a mannoprotein, a protein that contains covalently bound mannose residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein metabolic process","termid":"GO:0009100"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00598":null,"SJAG_00816":null,"SJAG_01021":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_02519":null,"SJAG_03082":null,"SJAG_04770":null,"SJAG_04906":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mannoprotein metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mannoprotein metabolism","type":"exact"}],"termid":"GO:0006056","terms_by_termid":{"GO:0000032":null}}


id: GO:0036517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a serotonergic neuron growth cone is directed to a specific target site in response to an attractive chemical signal.","definition_xrefs":["CL:0000850","GOC:PARL","PMID:21106844","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemoattraction of axon","termid":"GO:0061642"},{"relation_name":"part_of","term_name":"serotonergic neuron axon guidance","termid":"GO:0036515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction of serotonergic neuron axon","synonyms":[{"name":"chemoattraction of 5-HT axon","type":"exact"},{"name":"chemoattraction of serotonergic axon","type":"exact"}],"termid":"GO:0036517"}


id: GO:0102464
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: zeaxanthin + O2 + NADH + H+ = caloxanthin + H2O + NAD.","definition_xrefs":["GOC:pz","PMID:22509387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"zeaxanthin 2-beta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14016"],"termid":"GO:0102464"}


id: PBO:0051770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracisternal A particle-promoted polypeptide","termid":"PBO:0051770"}


id: GO:1903812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-serine into a cell.","definition_xrefs":["PMID:23895341","GOC:TermGenie","GO_REF:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-serine transport","termid":"GO:0015825"},{"relation_name":"is_a","term_name":"serine import across plasma membrane","termid":"GO:0098718"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"L-serine import across plasma membrane","synonyms":[{"name":"L-serine import into cell","type":"exact"}],"termid":"GO:1903812"}


id: PBO:0045497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSG1 antisense RNA 1","termid":"PBO:0045497"}


id: GO:0010845
data:
  {"annotated_genes":["SJAG_00266","SJAG_03438"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90930],"is_not":false,"summary":null,"term":"GO:0010845"},{"annotations":[109930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of recombination during meiosis. Reciprocal meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reciprocal meiotic recombination","termid":"GO:0010520"},{"relation_name":"is_a","term_name":"positive regulation of meiotic nuclear division","termid":"GO:0045836"},{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"positively_regulates","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_03438":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0006259","GO:0006310","GO:0140013"],"is_obsolete":false,"name":"positive regulation of reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of meiotic recombination","type":"related"}],"termid":"GO:0010845","terms_by_termid":{"GO:0010845":null,"GO:0010846":null}}


id: MONDO:0100532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blepharospasm, benign essential, susceptibility to","secondary_identifiers":["OMIM:606798","MEDGEN:1640286","UMLS:C4692845"],"termid":"MONDO:0100532","xrefs":{"Monarch":{"xref_id":"0100532"}}}


id: GO:0060335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of an interferon-gamma-mediated signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"positive regulation of response to type II interferon","termid":"GO:0060332"},{"relation_name":"is_a","term_name":"regulation of type II interferon-mediated signaling pathway","termid":"GO:0060334"},{"relation_name":"positively_regulates","term_name":"type II interferon-mediated signaling pathway","termid":"GO:0060333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of type II interferon-mediated signaling pathway","synonyms":[{"name":"positive regulation of gamma-interferon-mediated signaling pathway","type":"related"},{"name":"positive regulation of immune interferon-mediated signaling pathway","type":"exact"},{"name":"positive regulation of interferon-gamma-mediated signaling pathway","type":"broad"},{"name":"positive regulation of interferon-gamma-mediated signalling pathway","type":"exact"},{"name":"positive regulation of type II IFN-mediated pathway","type":"broad"}],"termid":"GO:0060335"}


id: PR:O94654
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 35 member F5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03583","PRO:DNx","PANTHER:PTHR23051:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C405.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC405.03c","secondary_identifiers":["UniProtKB:O94654"],"synonyms":[{"name":"Spom972h-SLC35F5","type":"exact"}],"termid":"PR:O94654"}


id: GO:0035758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to chemokine (C-C motif) ligand 21.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine binding","termid":"GO:0019957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 21 binding","synonyms":[{"name":"CCL21 binding","type":"exact"}],"termid":"GO:0035758"}


id: GO:0043882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: malate(out) + Na+(out) = malate(in) + Na+(in).","definition_xrefs":["GOC:jl","PMID:10903309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate transmembrane transporter activity","termid":"GO:0015140"},{"relation_name":"is_a","term_name":"sodium:dicarboxylate symporter activity","termid":"GO:0017153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"malate:sodium symporter activity","secondary_identifiers":["RHEA:72295"],"synonyms":[{"name":"Na(+)-malate symporter activity","type":"exact"},{"name":"Na+:malate symporter activity","type":"exact"},{"name":"malate Na(+) symporter activity","type":"exact"},{"name":"malate-sodium symporter activity","type":"exact"},{"name":"malate/sodium cotransporter activity","type":"broad"},{"name":"malate/sodium symporter activity","type":"exact"},{"name":"malate:Na+ symporter activity","type":"exact"},{"name":"malate:sodium cotransporter activity","type":"broad"},{"name":"sodium-dependent malate transporter","type":"broad"},{"name":"sodium/malate symporter activity","type":"exact"},{"name":"sodium:malate symporter activity","type":"exact"}],"termid":"GO:0043882"}


id: PBO:0001957
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates rgf3","termid":"PBO:0001957"}


id: GO:0160030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of pollen intine, the inner layer of the pollen wall. The reticulate pollen wall pattern consists of two layers, exine and intine.","definition_xrefs":["PMID:35498668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pollen wall assembly","termid":"GO:0010208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"pollen intine formation","termid":"GO:0160030"}


id: MONDO:0006253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete infiltrating bladder urothelial carcinoma sarcomatoid variant (obsolete MONDO:0006253)","termid":"MONDO:0006253","xrefs":{"Monarch":{"xref_id":"0006253"}}}


id: MONDO:0005541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A defect in the pars interarticularis of a vertebral bone.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disease of bone structure","termid":"MONDO:0000836"},{"relation_name":"is_a","term_name":"vertebral disorder","termid":"MONDO:0045002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylolysis","secondary_identifiers":["icd11.foundation:790009325","NCIT:C35034","HP:0003304","MESH:D013169","DOID:2300","SCTID:240221008","UMLS:C0038018","MEDGEN:21294","EFO:0005649"],"synonyms":[{"name":"spondylolysis","type":"exact"},{"name":"spondylolysis (disease)","type":"exact"}],"termid":"MONDO:0005541","xrefs":{"Monarch":{"xref_id":"0005541"}}}


id: PR:Q9UUJ3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rga9 gene.","definition_xrefs":["UniProtKB:Q9UUJ3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho-GTPase-activating protein 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.16","synonyms":[{"name":"Spom972h-rga9","type":"exact"}],"termid":"PR:Q9UUJ3"}


id: PBO:0003868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM22 inner membrane protein import complex anchor subunit Tim18","termid":"PBO:0003868"}


id: GO:0070917
data:
  {"annotated_genes":["SJAG_03015"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78027],"is_not":false,"summary":null,"term":"GO:0070917"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of inositol phosphoceramide synthase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03015":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"inositol phosphoceramide synthase regulator activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"IPC synthase regulator activity","type":"exact"}],"termid":"GO:0070917","terms_by_termid":{"GO:0070917":null}}


id: PBO:0005802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element","termid":"PBO:0005802"}


id: PBO:0073402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 5","termid":"PBO:0073402"}


id: GO:0033886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 2- and 3-sulfate groups of the polysulfates of cellulose and charonin.","definition_xrefs":["EC:3.1.6.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"cellulose-polysulfatase activity","secondary_identifiers":["MetaCyc:3.1.6.7-RXN"],"synonyms":[{"name":"cellulose-sulfate sulfohydrolase activity","type":"related"}],"termid":"GO:0033886"}


id: PBO:0111932
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIT family","termid":"PBO:0111932"}


id: GO:0015188
data:
  {"annotated_genes":["SJAG_04725","SJAG_02029"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104738,112005],"is_not":false,"summary":null,"term":"GO:0015188"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-isoleucine from one side of a membrane to the other. L-isoleucine is (2R*,3R*)-2-amino-3-methylpentanoic acid.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"branched-chain amino acid transmembrane transporter activity","termid":"GO:0015658"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"L-isoleucine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-isoleucine transporter activity","type":"broad"},{"name":"isoleucine/valine:sodium symporter activity","type":"narrow"},{"name":"leucine/isoleucine/valine porter activity","type":"narrow"},{"name":"leucine/valine/isoleucine permease activity","type":"narrow"}],"termid":"GO:0015188","terms_by_termid":{"GO:0015188":null}}


id: PBO:0108607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER to Golgi ceramide transport protein, lipocalin superfamily Svf1","termid":"PBO:0108607"}


id: PR:O14276
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fyv7 gene.","definition_xrefs":["UniProtKB:O14276","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA-processing protein fyv7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.07","synonyms":[{"name":"Spom972h-fyv7","type":"exact"}],"termid":"PR:O14276"}


id: PBO:0085602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in cellular response to oxidative stress; required for oxidation of specific cysteine residues of transcription factor Yap1p, resulting in nuclear localization of Yap1p in response to stress; YBP1 has a paralog, YBP2, that arose from the whole genome duplication","termid":"PBO:0085602"}


id: GO:1901992
data:
  {"annotated_genes":["SJAG_01805","SJAG_03048","SJAG_01801","SJAG_02723","SJAG_04259","SJAG_00256","SJAG_04968","SJAG_00214","SJAG_03126","SJAG_02810","SJAG_04332","SJAG_02451","SJAG_03486","SJAG_01311","SJAG_02169","SJAG_01456","SJAG_03591","SJAG_02592","SJAG_02498","SJAG_03353","SJAG_02336","SJAG_03699","SJAG_03681","SJAG_00117","SJAG_01679","SJAG_01401","SJAG_01210","SJAG_01837","SJAG_03602","SJAG_01901","SJAG_03067","SJAG_04597","SJAG_03592","SJAG_04573","SJAG_02380","SJAG_00082","SJAG_01000","SJAG_02342","SJAG_01297","SJAG_04486","SJAG_03309","SJAG_04140","SJAG_00216","SJAG_00666","SJAG_02404","SJAG_00883","SJAG_01825"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105826,92595,116269,113946,101506,110218,117903,115777,109188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[96084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[104306,113948,95635,91868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031536"},{"annotations":[107764,111159,108612,107926,119082,104307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900087"},{"annotations":[89914,100342,72491,118491,105422,95686,109190,75237,96258,94019,96297,103689,113186,93618,100915,110540,118680,89905,112320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010971"},{"annotations":[89708,103320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905287"},{"annotations":[104314,104038,102064,116768,95689,99611,113361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"},{"annotations":[117340,78497,93630,110867,76741,117907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007089"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic cell cycle phase transition.","definition_xrefs":["PMID:22841721","GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle","termid":"GO:0045931"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle phase transition","termid":"GO:1901989"},{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle phase transition","termid":"GO:1901990"},{"relation_name":"positively_regulates","term_name":"mitotic cell cycle phase transition","termid":"GO:0044772"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00117":null,"SJAG_00214":null,"SJAG_00216":null,"SJAG_00256":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01000":null,"SJAG_01210":null,"SJAG_01297":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01456":null,"SJAG_01679":null,"SJAG_01801":null,"SJAG_01805":null,"SJAG_01825":null,"SJAG_01837":null,"SJAG_01901":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02342":null,"SJAG_02380":null,"SJAG_02404":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02810":null,"SJAG_03048":null,"SJAG_03067":null,"SJAG_03126":null,"SJAG_03309":null,"SJAG_03353":null,"SJAG_03486":null,"SJAG_03591":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_03681":null,"SJAG_03699":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04332":null,"SJAG_04486":null,"SJAG_04573":null,"SJAG_04597":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0044772","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic cell cycle phase transition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of mitotic cell cycle phase transition","type":"narrow"},{"name":"up regulation of mitotic cell cycle phase transition","type":"exact"},{"name":"up-regulation of mitotic cell cycle phase transition","type":"exact"},{"name":"upregulation of mitotic cell cycle phase transition","type":"exact"}],"termid":"GO:1901992","terms_by_termid":{"GO:0007089":null,"GO:0010971":null,"GO:0031536":null,"GO:0045842":null,"GO:0140499":null,"GO:1900087":null,"GO:1902426":null,"GO:1905287":null}}


id: GO:0030754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 5,7,4'-trihydroxyflavone = S-adenosyl-L-homocysteine + 4'-methoxy-5,7-dihydroxyflavone.","definition_xrefs":["EC:2.1.1.75"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"apigenin 4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:APIGENIN-4-O-METHYLTRANSFERASE-RXN","RHEA:20429"],"synonyms":[{"name":"S-adenosyl-L-methionine:5,7,4'-trihydroxyflavone 4'-O-methyltransferase activity","type":"related"},{"name":"flavonoid O-methyltransferase activity","type":"broad"},{"name":"flavonoid methyltransferase activity","type":"related"}],"termid":"GO:0030754"}


id: PBO:0072866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAS-6 centriolar assembly protein","termid":"PBO:0072866"}


id: GO:0047890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S)-flavan-4-ol + NADP+ = (2S)-flavanone + NADPH.","definition_xrefs":["MetaCyc:FLAVANONE-4-REDUCTASE-RXN","EC:1.1.1.234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"flavanone 4-reductase activity","secondary_identifiers":["RHEA:11228"],"synonyms":[{"name":"(2S)-flavan-4-ol:NADP+ 4-oxidoreductase activity","type":"related"},{"name":"flavonone 4-reductase activity","type":"exact"}],"termid":"GO:0047890"}


id: PBO:0080822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylulokinase","termid":"PBO:0080822"}


id: GO:0006219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxyuridine, 2-deoxyribosyluracil, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyuridine metabolic process","termid":"GO:0046096"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside catabolic process","termid":"GO:0046127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"deoxyuridine catabolic process","synonyms":[{"name":"deoxyuridine breakdown","type":"exact"},{"name":"deoxyuridine catabolism","type":"exact"},{"name":"deoxyuridine degradation","type":"exact"}],"termid":"GO:0006219"}


id: GO:0035616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A histone deubiquitination process in which a ubiquitin monomer is removed from a conserved lysine residue in the C-terminus of histone H2B. The conserved lysine residue is K119 in fission yeast, K123 in budding yeast, or K120 in mammals.","definition_xrefs":["PMID:15657442","GOC:bf","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2B conserved C-terminal lysine deubiquitination (obsolete GO:0035616)","synonyms":[{"name":"budding yeast H2B K123 deubiquitination","type":"narrow"},{"name":"fission yeast H2B K119 deubiquitination","type":"narrow"},{"name":"mammalian H2B K120 deubiquitination","type":"narrow"}],"termid":"GO:0035616"}


id: MONDO:1010976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Huntington disease that occurs in Rhesus monkey.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Huntington disease, non-human animal","termid":"MONDO:1010231"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Huntington disease, Rhesus monkey","secondary_identifiers":["OMIA:000485-9544"],"termid":"MONDO:1010976","xrefs":{"Monarch":{"xref_id":"1010976"}}}


id: PBO:0089004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino]imidazole-4-carboxamide isomerase His6","termid":"PBO:0089004"}


id: GO:2000754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sphingomyelin catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of phospholipid catabolic process","termid":"GO:0060696"},{"relation_name":"is_a","term_name":"regulation of membrane lipid metabolic process","termid":"GO:1905038"},{"relation_name":"regulates","term_name":"sphingomyelin catabolic process","termid":"GO:0006685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of sphingomyelin catabolic process","synonyms":[{"name":"regulation of sphingomyelin breakdown","type":"exact"},{"name":"regulation of sphingomyelin catabolism","type":"exact"},{"name":"regulation of sphingomyelin degradation","type":"exact"}],"termid":"GO:2000754"}


id: PBO:0083968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucoamylase (glucan 1,4-alpha-glucosidase); allows yeast to degrade starch","termid":"PBO:0083968"}


id: PBO:0061868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory marker protein","termid":"PBO:0061868"}


id: GO:0006439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Hydrolysis of the peptidyl-tRNA by aminoacyl-tRNA hydrolase upon termination of translation. Analogous to usual peptidyl transfer during elongation, except that the acceptor is H2O instead of an aminoacyl-tRNA.","definition_xrefs":["ISBN:019879276X"],"gene_count":0,"genotype_count":0,"name":"obsolete aminoacyl-tRNA hydrolase reaction (obsolete GO:0006439)","synonyms":[{"name":"aminoacyl-tRNA hydrolase reaction","type":"exact"}],"termid":"GO:0006439"}


id: GO:0070734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of one or more methyl groups to lysine at position 27 of the histone.","definition_xrefs":["GOC:mah","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K27 methylation (obsolete GO:0070734)","synonyms":[{"name":"histone H3 K27 methylation","type":"exact"},{"name":"histone H3K27me","type":"exact"},{"name":"histone lysine H3 K27 methylation","type":"exact"}],"termid":"GO:0070734"}


id: FYPO:0002411
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, is elongated, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable curved vegetative cell","termid":"FYPO:0002113"},{"relation_name":"is_a","term_name":"curved elongated vegetative cell","termid":"FYPO:0005103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000004","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"inviable curved elongated vegetative cell","synonyms":[{"name":"curved elongated inviable cell","type":"exact"},{"name":"inviable curved elongated cell","type":"exact"},{"name":"inviable curved elongated cell during vegetative growth","type":"exact"},{"name":"inviable curved elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; curved elongated vegetative cell","type":"exact"}],"termid":"FYPO:0002411"}


id: GO:0008090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of organelles or molecules along microtubules from the cell periphery toward the cell body in nerve cell axons.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonal transport","termid":"GO:0098930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"retrograde axonal transport","synonyms":[{"name":"retrograde axon cargo transport","type":"exact"}],"termid":"GO:0008090"}


id: GO:0062054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of a fluoride ion through a transmembrane aqueous pore or channel.","definition_xrefs":["PMID:25156118","PMID:23991286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion channel activity","termid":"GO:0005253"},{"relation_name":"is_a","term_name":"fluoride transmembrane transporter activity","termid":"GO:1903425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"fluoride channel activity","termid":"GO:0062054"}


id: MONDO:1010732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any severe combined immunodeficiency disease in pigs in which the cause of the disease is a mutation in the IL2RG gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency disease, non-human animal","termid":"MONDO:1011422"},{"relation_name":"is_a","term_name":"X-linked disease, non-human animal","termid":"MONDO:1012575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked severe combined immunodeficiency disease, IL2RG-related, pig","secondary_identifiers":["OMIA:000899-9823"],"termid":"MONDO:1010732","xrefs":{"Monarch":{"xref_id":"1010732"}}}


id: MONDO:0014472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary periodic fever syndrome","termid":"MONDO:0017953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periodic fever-infantile enterocolitis-autoinflammatory syndrome","secondary_identifiers":["NORD:1939","Orphanet:436166","MEDGEN:863504","UMLS:C4015067","NANDO:2200459","GARD:17725","OMIM:616050","NANDO:1200994"],"synonyms":[{"name":"AIFEC","type":"related"},{"name":"AUTOINFLAMMATION with infantile enterocolitis","type":"related"},{"name":"Autoinflammation with Infantile Enterocolitis","type":"exact"},{"name":"NLRC4-related MAS","type":"exact"},{"name":"NLRC4-related autoinflammatory syndrome with MAS","type":"exact"},{"name":"NLRC4-related autoinflammatory syndrome with macrophage activation syndrome","type":"exact"},{"name":"NLRC4-related infantile enterocolitis-autoinflammatory syndrome","type":"exact"},{"name":"NLRC4-related macrophage activation syndrome","type":"exact"},{"name":"autoinflammation with infantile enterocolitis","type":"exact"}],"termid":"MONDO:0014472","xrefs":{"Monarch":{"xref_id":"0014472"}}}


id: PBO:0051820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron responsive element binding protein 2","termid":"PBO:0051820"}


id: PR:000050584
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitogen-activated protein kinase spk1 (Schizosaccharomyces pombe) that has been phosphorylated at positions equivalent to Thr-199 and Tyr-201 of the amino acid sequence represented by UniProtKB:P27638. Example:UniProtKB:P27638, Thr-199, MOD:00047|Tyr-201, MOD:00048.","definition_xrefs":["PomBase:VW","PMID:33823663","PRO:DAN"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spk1/Phos:(T199)","pombase_gene_id":"SPAC31G5.09c","synonyms":[{"name":"PomBase_original_PRO_term_name: mitogen-activated protein kinase spk1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-spk1/Phos:1","type":"exact"},{"name":"UniProtKB:P27638, Thr-199, MOD:00047|Tyr-201, MOD:00048","type":"narrow"},{"name":"spk1/Phos:(T199)","type":"exact"}],"termid":"PR:000050584"}


id: PBO:0049141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamic--pyruvic transaminase 2","termid":"PBO:0049141"}


id: PBO:0000767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO conjugating enzyme Hus5","termid":"PBO:0000767"}


id: MONDO:0014922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any myofibrillar myopathy in which the cause of the disease is a mutation in the KY gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myofibrillar myopathy","termid":"MONDO:0018943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myofibrillar myopathy 7","secondary_identifiers":["UMLS:C4310711","MEDGEN:934678","OMIM:617114","DOID:0080098"],"synonyms":[{"name":"KY myofibrillar myopathy (disease)","type":"exact"},{"name":"MFM7","type":"related"},{"name":"alpha-b crystalin-related fatal infantile hypertonic myofibrillar myopathy","type":"exact"},{"name":"myofibrillar myopathy (disease) caused by mutation in KY","type":"exact"},{"name":"myopathy, myofibrillar, 7","type":"exact"},{"name":"myopathy, myofibrillar, type 7","type":"exact"}],"termid":"MONDO:0014922","xrefs":{"Monarch":{"xref_id":"0014922"}}}


id: PBO:0006189
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-not_during","termid":"PBO:0006189"}


id: GO:0000365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining together of exons from two different primary transcripts of messenger RNA (mRNA) via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.","definition_xrefs":["ISBN:0879695897","PMID:18458335","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mRNA trans splicing, via spliceosome","synonyms":[{"name":"nuclear mRNA trans splicing, via U2-type spliceosome","type":"narrow"},{"name":"nuclear mRNA trans splicing, via spliceosome","type":"exact"}],"termid":"GO:0000365"}


id: MOD:00376
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-histidine residue and 5'-phosphoadenosine through a phosphoramide ester bond to form 1'-(phospho-5'-adenosine)-L-histidine.","definition_xrefs":["RESID:AA0371","PubMed:15182206","PubMed:9323207","Unimod:405#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"adenylated residue","termid":"MOD:01165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1'-(phospho-5'-adenosine)-L-histidine","synonyms":[{"name":"(2S)-2-amino-3-[1-(5'-adenosine phosphono)imidazol-4-yl]propanoic acid","type":"exact"},{"name":"1'-(phospho-5'-adenosine)-L-histidine","type":"exact"},{"name":"ACT_SITE Tele-AMP-histidine intermediate","type":"exact"},{"name":"AMP binding site","type":"related"},{"name":"L-histidine 5'-adenosine phosphoramidester","type":"exact"},{"name":"L-histidine monoanhydride with 5'-adenylic acid","type":"exact"},{"name":"N(tau)-5'-adenylic-L-histidine","type":"exact"},{"name":"N1'-adenylylated histidine","type":"exact"},{"name":"Phosphoadenosine","type":"related"},{"name":"tele-5'-adenylic-L-histidine","type":"exact"}],"termid":"MOD:00376"}


id: GO:1901258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage colony-stimulating factor production.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of macrophage colony-stimulating factor production","termid":"GO:1901256"},{"relation_name":"positively_regulates","term_name":"macrophage colony-stimulating factor production","termid":"GO:0036301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of macrophage colony-stimulating factor production","synonyms":[{"name":"activation of M-CSF production","type":"exact"},{"name":"activation of macrophage colony-stimulating factor production","type":"narrow"},{"name":"positive regulation of M-CSF production","type":"exact"},{"name":"up regulation of M-CSF production","type":"exact"},{"name":"up regulation of macrophage colony-stimulating factor production","type":"exact"},{"name":"up-regulation of M-CSF production","type":"exact"},{"name":"up-regulation of macrophage colony-stimulating factor production","type":"exact"},{"name":"upregulation of M-CSF production","type":"exact"},{"name":"upregulation of macrophage colony-stimulating factor production","type":"exact"}],"termid":"GO:1901258"}


id: MOD:00276
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between two cysteine residues, a lysine residue, and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["RESID:AA0271","PubMed:9237682","PubMed:12709052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-lysine residue","termid":"MOD:02074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"heme P460-bis-L-cysteine-L-lysine","synonyms":[{"name":"(19S,20S)-[7,12-bis((S)-1-[((R)-2-amino-2-carboxy)ethylsulfanyl]ethyl)-20-([(S)-5-amino-5-carboxypentyl]amino)-3,8,13,17-tetramethyl-21H,23H-19,20-dihydroporphine-2,18-bis(2-carboxyethyl)-N21,N22,N23,N24]-ferrate","type":"exact"},{"name":"BINDING Heme (covalent; via 3 links)","type":"exact"},{"name":"bis(S-cysteinyl)-N6-lysino-heme","type":"exact"},{"name":"heme P460-bis-L-cysteine-L-lysine","type":"exact"}],"termid":"MOD:00276"}


id: GO:1904194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cholangiocyte apoptotic process.","definition_xrefs":["GO_REF:0000058","PMID:24498161","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell apoptotic process","termid":"GO:1904037"},{"relation_name":"is_a","term_name":"regulation of cholangiocyte apoptotic process","termid":"GO:1904192"},{"relation_name":"positively_regulates","term_name":"cholangiocyte apoptotic process","termid":"GO:1902488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cholangiocyte apoptotic process","synonyms":[{"name":"activation of cholangiocyte apoptosis","type":"narrow"},{"name":"activation of cholangiocyte apoptotic process","type":"narrow"},{"name":"activation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"activation of epithelial cell of bile duct apoptotic process","type":"narrow"},{"name":"positive regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"positive regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"positive regulation of epithelial cell of bile duct apoptotic process","type":"exact"},{"name":"up regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"up regulation of cholangiocyte apoptotic process","type":"exact"},{"name":"up regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"up regulation of epithelial cell of bile duct apoptotic process","type":"exact"},{"name":"up-regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"up-regulation of cholangiocyte apoptotic process","type":"exact"},{"name":"up-regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"up-regulation of epithelial cell of bile duct apoptotic process","type":"exact"},{"name":"upregulation of cholangiocyte apoptosis","type":"narrow"},{"name":"upregulation of cholangiocyte apoptotic process","type":"exact"},{"name":"upregulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"upregulation of epithelial cell of bile duct apoptotic process","type":"exact"}],"termid":"GO:1904194"}


id: MONDO:0008282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyposis, intestinal, with multiple exostoses","secondary_identifiers":["MESH:C566776","OMIM:175450","MEDGEN:401357","UMLS:C1868005"],"synonyms":[{"name":"polyposis, intestinal, with multiple exostoses","type":"exact"}],"termid":"MONDO:0008282","xrefs":{"Monarch":{"xref_id":"0008282"}}}


id: GO:2000300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle exocytosis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter secretion","termid":"GO:0046928"},{"relation_name":"is_a","term_name":"regulation of regulated secretory pathway","termid":"GO:1903305"},{"relation_name":"regulates","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic vesicle exocytosis","termid":"GO:2000300"}


id: GO:0097225
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The highly organized segment of the sperm flagellum which begins at the connecting piece and is characterized by the presence of 9 outer dense fibers (ODFs) that lie outside each of the 9 outer axonemal microtubule doublets and by a sheath of mitochondria that encloses the ODFs and the axoneme; the midpiece terminates about one-fourth of the way down the sperm flagellum at the annulus, which marks the beginning of the principal piece.","definition_xrefs":["MP:0009831","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sperm flagellum","termid":"GO:0036126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm midpiece","termid":"GO:0097225"}


id: MONDO:0015029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"extraneural perineurioma","termid":"MONDO:0015031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticular perineurioma","secondary_identifiers":["GARD:19728","Orphanet:100000","UMLS:C5681810","icd11.foundation:9105270","MEDGEN:1842718"],"termid":"MONDO:0015029","xrefs":{"Monarch":{"xref_id":"0015029"}}}


id: MONDO:0016632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thrombotic disorder due to a coagulation factors defect (obsolete MONDO:0016632)","secondary_identifiers":["Orphanet:248358"],"termid":"MONDO:0016632","xrefs":{"Monarch":{"xref_id":"0016632"}}}


id: GO:0006806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete insecticide resistance (obsolete GO:0006806)","synonyms":[{"name":"insecticide resistance","type":"exact"}],"termid":"GO:0006806"}


id: PBO:0090743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, Human BICC1 ortholog","termid":"PBO:0090743"}


id: PBO:0083248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; identified by expression profiling and mass spectrometry","termid":"PBO:0083248"}


id: PBO:0088880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anillin-related medial ring protein Mid1","termid":"PBO:0088880"}


id: PATO:0002538
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality that obtains by virtue of the bearer being concave on one side and convex on the other.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/concavo-convex"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concavity","termid":"PATO:0002005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concavo-convex","synonyms":[{"name":"concavoconvex","type":"exact"}],"termid":"PATO:0002538"}


id: PBO:0084228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Htz1p-binding component of the SWR1 complex; exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A; may function as a lock that prevents removal of H2AZ from nucleosomes; required for vacuolar protein sorting","termid":"PBO:0084228"}


id: MONDO:0012613
data:
  {"annotated_genes":["SJAG_00325","SJAG_02099"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88937,88938],"is_not":false,"summary":null,"term":"MONDO:0012613"}]},"cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the NSUN2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00325":null,"SJAG_02099":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:370849","MESH:C567018","OMIM:611091","UMLS:C1970199","DOID:0081181","GARD:22541"],"synonyms":[{"name":"MRT5","type":"related"},{"name":"NSUN2 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in NSUN2","type":"exact"},{"name":"intellectual disability, autosomal recessive 5","type":"exact"},{"name":"intellectual disability, autosomal recessive type 5","type":"exact"},{"name":"mental retardation, autosomal recessive 5","type":"related"},{"name":"mental retardation, autosomal recessive type 5","type":"exact"}],"termid":"MONDO:0012613","terms_by_termid":{"MONDO:0012613":null},"xrefs":{"Monarch":{"xref_id":"0012613"}}}


id: PBO:0026988
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_nigericin","termid":"PBO:0026988"}


id: GO:0052560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates the immune response of the symbiont organism; the immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of symbiont immune response (obsolete GO:0052560)","synonyms":[{"name":"induction by organism of symbiont immune response","type":"exact"}],"termid":"GO:0052560"}


id: GO:0097633
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the phagophore assembly site membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mf"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of phagophore assembly site membrane (obsolete GO:0097633)","synonyms":[{"name":"intrinsic to phagophore assembly site membrane","type":"narrow"}],"termid":"GO:0097633"}


id: PBO:0043542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coilin pseudogene 1","termid":"PBO:0043542"}


id: FYPO:0000839
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains one nucleus, has no septum, is elongated, and is inviable. Progression through the mitotic cell cycle is arrested in all inviable elongated mononucleate aseptate cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"},{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"},{"relation_name":"is_a","term_name":"inviable elongated aseptate cell","termid":"FYPO:0002066"},{"relation_name":"is_a","term_name":"inviable aseptate mononucleate vegetative cell","termid":"FYPO:0003763"},{"relation_name":"is_a","term_name":"inviable elongated mononucleate vegetative cell","termid":"FYPO:0004255"},{"relation_name":"is_a","term_name":"elongated mononucleate aseptate vegetative cell","termid":"FYPO:0005773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0000005","FYPO:0000032","FYPO:0000004","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"inviable elongated mononucleate aseptate cell","secondary_identifiers":["FYPO:0004923"],"synonyms":[{"name":"cell cycle-arrested elongated inviable mononucleate aseptate vegetative cell","type":"exact"},{"name":"elongated inviable mononucleate aseptate cell with mitotic cell cycle arrest during vegetative growth","type":"exact"},{"name":"elongated inviable mononucleate aseptate vegetative cell with cell cycle arrest","type":"exact"},{"name":"elongated mononucleate aseptate cell during vegetative growth","type":"exact"},{"name":"inviable elongated mononucleate aseptate cell during mitotic cell cycle","type":"related"},{"name":"inviable elongated mononucleate aseptate vegetative cell with arrested cell cycle","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic cell cycle arrest","type":"exact"},{"name":"lethal; elongated mononucleate aseptate cell","type":"exact"},{"name":"long aseptate mononucleate cell","type":"exact"},{"name":"mitotic cell cycle arrest with elongated inviable mononucleate aseptate cell","type":"exact"}],"termid":"FYPO:0000839"}


id: GO:0044771
data:
  {"annotated_genes":["SJAG_00364","SJAG_01330","SJAG_04126","SJAG_00666","SJAG_04259","SJAG_00145","SJAG_03327","SJAG_00100","SJAG_04280","SJAG_04332","SJAG_01837","SJAG_02771","SJAG_04287","SJAG_04853","SJAG_01082","SJAG_03854","SJAG_01515"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108271,116496],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905318"},{"annotations":[100604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990946"},{"annotations":[93309,108571,118060],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0033315"},{"annotations":[118675,77147],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0033316"},{"annotations":[102062,100605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990949"},{"annotations":[104221,102063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990950"},{"annotations":[80374,72443],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0110031"},{"annotations":[100606],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902103"},{"annotations":[75239],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0110032"},{"annotations":[115782],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[97062],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905191"},{"annotations":[103269],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[110326],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1901993"}]},"cv_name":"biological_process","definition":"The cell cycle process by which a cell commits to entering the next meiotic cell cycle phase.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase transition","termid":"GO:0044770"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00145":null,"SJAG_00364":null,"SJAG_00666":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01837":null,"SJAG_02771":null,"SJAG_03327":null,"SJAG_03854":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic cell cycle phase transition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cell cycle transition","type":"broad"}],"termid":"GO:0044771","terms_by_termid":{"GO:0033315":null,"GO:0033316":null,"GO:0110031":null,"GO:0110032":null,"GO:1901993":null,"GO:1902103":null,"GO:1905191":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1990946":null,"GO:1990949":null,"GO:1990950":null}}


id: PBO:0083473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene RPM1","termid":"PBO:0083473"}


id: PBO:0057971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689d-1","termid":"PBO:0057971"}


id: GO:2000591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metanephric mesenchymal cell migration.","definition_xrefs":["GOC:obol","GOC:yaf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of metanephric mesenchymal cell migration","termid":"GO:2000589"},{"relation_name":"positively_regulates","term_name":"metanephric mesenchymal cell migration","termid":"GO:0035789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metanephric mesenchymal cell migration","synonyms":[{"name":"positive regulation of metanephric mesenchyme chemotaxis","type":"related"}],"termid":"GO:2000591"}


id: PBO:0078365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 9-1","termid":"PBO:0078365"}


id: PBO:0077794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torsin family 1 member A","termid":"PBO:0077794"}


id: SO:0000026
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"RNA_motif","termid":"SO:0000715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_junction_loop","synonyms":[{"name":"RNA junction loop","type":"exact"}],"termid":"SO:0000026"}


id: GO:1900373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of purine nucleotide biosynthetic processes.","definition_xrefs":["GOC:go_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleotide biosynthetic process","termid":"GO:0030810"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide biosynthetic process","termid":"GO:1900371"},{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide metabolic process","termid":"GO:1900544"},{"relation_name":"positively_regulates","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"positive regulation of purine nucleotide biosynthetic process","synonyms":[{"name":"activation of purine nucleotide anabolism","type":"exact"},{"name":"activation of purine nucleotide biosynthesis","type":"exact"},{"name":"activation of purine nucleotide biosynthetic process","type":"narrow"},{"name":"activation of purine nucleotide formation","type":"exact"},{"name":"activation of purine nucleotide synthesis","type":"exact"},{"name":"positive regulation of purine nucleotide anabolism","type":"exact"},{"name":"positive regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"positive regulation of purine nucleotide formation","type":"exact"},{"name":"positive regulation of purine nucleotide synthesis","type":"exact"},{"name":"up regulation of purine nucleotide anabolism","type":"exact"},{"name":"up regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"up regulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"up regulation of purine nucleotide formation","type":"exact"},{"name":"up regulation of purine nucleotide synthesis","type":"exact"},{"name":"up-regulation of purine nucleotide anabolism","type":"exact"},{"name":"up-regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"up-regulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"up-regulation of purine nucleotide formation","type":"exact"},{"name":"up-regulation of purine nucleotide synthesis","type":"exact"},{"name":"upregulation of purine nucleotide anabolism","type":"exact"},{"name":"upregulation of purine nucleotide biosynthesis","type":"exact"},{"name":"upregulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"upregulation of purine nucleotide formation","type":"exact"},{"name":"upregulation of purine nucleotide synthesis","type":"exact"}],"termid":"GO:1900373"}


id: PBO:0034390
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_eggs_laid_in_by","termid":"PBO:0034390"}


id: PBO:0039261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 7 family member A1 pseudogene 3","termid":"PBO:0039261"}


id: PBO:0058270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4648","termid":"PBO:0058270"}


id: PBO:0043323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC like kinase 1","termid":"PBO:0043323"}


id: GO:0035476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of angioblasts, cells involved in blood vessel morphogenesis.","definition_xrefs":["PMID:19815777","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"blood vessel morphogenesis","termid":"GO:0048514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angioblast cell migration","termid":"GO:0035476"}


id: PBO:0113314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in recycling of membrane transporters from endosome to plasma membrane; plays a role in the multivesicular body sorting pathway; functions and forms a complex with Did2p; recruitment to endosomes is mediated by the Vps2p-Vps24p subcomplex of ESCRT-III; also interacts with Vps4p","termid":"PBO:0113314"}


id: PBO:0046840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 13","termid":"PBO:0046840"}


id: PBO:0068175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 482","termid":"PBO:0068175"}


id: PBO:0043328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC like kinase 3 pseudogene 2","termid":"PBO:0043328"}


id: FYPO:0006601
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is normal (i.e. indistinguishable from wild type during metaphase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to centromeric chromatin","termid":"FYPO:0005072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to centromeric chromatin during mitotic metaphase","synonyms":[{"name":"normal protein localisation to centromeric chromatin during mitotic metaphase during vegetative growth","type":"exact"},{"name":"normal protein localization to centromeric chromatin during metaphase during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at centromere during mitotic metaphase","type":"exact"}],"termid":"FYPO:0006601"}


id: GO:1900639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of asperfuranone biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asperfuranone biosynthetic process","termid":"GO:1900637"},{"relation_name":"is_a","term_name":"positive regulation of polyketide biosynthetic process","termid":"GO:1900734"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"asperfuranone biosynthetic process","termid":"GO:1900554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of asperfuranone biosynthetic process","synonyms":[{"name":"activation of asperfuranone anabolism","type":"exact"},{"name":"activation of asperfuranone biosynthesis","type":"exact"},{"name":"activation of asperfuranone biosynthetic process","type":"narrow"},{"name":"activation of asperfuranone formation","type":"exact"},{"name":"activation of asperfuranone synthesis","type":"exact"},{"name":"positive regulation of asperfuranone anabolism","type":"exact"},{"name":"positive regulation of asperfuranone biosynthesis","type":"exact"},{"name":"positive regulation of asperfuranone formation","type":"exact"},{"name":"positive regulation of asperfuranone synthesis","type":"exact"},{"name":"up regulation of asperfuranone anabolism","type":"exact"},{"name":"up regulation of asperfuranone biosynthesis","type":"exact"},{"name":"up regulation of asperfuranone biosynthetic process","type":"exact"},{"name":"up regulation of asperfuranone formation","type":"exact"},{"name":"up regulation of asperfuranone synthesis","type":"exact"},{"name":"up-regulation of asperfuranone anabolism","type":"exact"},{"name":"up-regulation of asperfuranone biosynthesis","type":"exact"},{"name":"up-regulation of asperfuranone biosynthetic process","type":"exact"},{"name":"up-regulation of asperfuranone formation","type":"exact"},{"name":"up-regulation of asperfuranone synthesis","type":"exact"},{"name":"upregulation of asperfuranone anabolism","type":"exact"},{"name":"upregulation of asperfuranone biosynthesis","type":"exact"},{"name":"upregulation of asperfuranone biosynthetic process","type":"exact"},{"name":"upregulation of asperfuranone formation","type":"exact"},{"name":"upregulation of asperfuranone synthesis","type":"exact"}],"termid":"GO:1900639"}


id: PATO:0001503
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A complexity quality in a bearer by virtue of the bearer's having few parts or being complicated or compound.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complexity","termid":"PATO:0001502"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simple","termid":"PATO:0001503"}


id: GO:0070417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.","definition_xrefs":["GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cold","termid":"GO:0009409"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cold","synonyms":[{"name":"cellular response to cold stress","type":"exact"}],"termid":"GO:0070417"}


id: GO:0055090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of acylglycerol within an organism or cell.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid homeostasis","termid":"GO:0055088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acylglycerol homeostasis","synonyms":[{"name":"glyceride homeostasis","type":"exact"}],"termid":"GO:0055090"}


id: MONDO:0044719
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe, sometimes life-threatening, form of erythema multiforme. It is considered to be a hypersensitivity skin reaction triggered by a variety of stimuli, including infections and medication. It is characterized by raised, edematous papules in the extremities; involvement of one or more mucous membranes; and epidermal detachment involving less than ten percent of the total body surface area.","definition_xrefs":["NCIT:C3385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic dermatosis","termid":"MONDO:0017396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"erythema multiforme major","secondary_identifiers":["MEDGEN:469028","UMLS:C3241919","GARD:22049","Orphanet:502499"],"synonyms":[{"name":"erythema exsudativum multiforme majus","type":"exact"},{"name":"erythema multiforme majus","type":"exact"}],"termid":"MONDO:0044719","xrefs":{"Monarch":{"xref_id":"0044719"}}}


id: PBO:0072619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial spoke head 3","termid":"PBO:0072619"}


id: MONDO:0019983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"kidney neoplasm","termid":"MONDO:0021163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"multiloculated renal cyst","secondary_identifiers":["SCTID:86463003","MEDGEN:609113","UMLS:C0431719","NANDO:2200171","GARD:19376","Orphanet:97366"],"synonyms":[{"name":"multilocular cyst of the kidney","type":"exact"},{"name":"multilocular renal cyst","type":"exact"}],"termid":"MONDO:0019983","xrefs":{"Monarch":{"xref_id":"0019983"}}}


id: PBO:0077083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF interacting protein with forkhead associated domain","termid":"PBO:0077083"}


id: MONDO:0020971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the urethra secondary to infection with Neisseria gonorrhoeae; this infection is spread through sexual contact.","definition_xrefs":["NCIT:C26787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonorrhea","termid":"MONDO:0004277"},{"relation_name":"is_a","term_name":"urethritis","termid":"MONDO:0005297"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonococcal urethritis","secondary_identifiers":["icd11.foundation:684710834","MEDGEN:42278","SCTID:236682002","UMLS:C0018078"],"synonyms":[{"name":"Gonococcal urethritis","type":"related"},{"name":"gc urethritis","type":"exact"},{"name":"gonococcal urethritis","type":"exact"}],"termid":"MONDO:0020971","xrefs":{"Monarch":{"xref_id":"0020971"}}}


id: PBO:0058609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6741","termid":"PBO:0058609"}


id: GO:0031341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell killing, the process in which a cell brings about the death of another cell, either in the same or a different organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell killing","termid":"GO:0001906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell killing","termid":"GO:0031341"}


id: MONDO:0700041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroblastoma, susceptibility to, 2","secondary_identifiers":["OMIM:613013","MEDGEN:416607","UMLS:C2751682"],"synonyms":[{"name":"NBLST2","type":"exact"},{"name":"neuroblastoma, susceptibility to, type 2","type":"exact"},{"name":"susceptibility to neuroblastoma 2","type":"exact"}],"termid":"MONDO:0700041","xrefs":{"Monarch":{"xref_id":"0700041"}}}


id: PBO:0047007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A10","termid":"PBO:0047007"}


id: PBO:0084276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein involved in GPI anchor synthesis; putative alpha 1,2 mannosyltransferase required for addition of the third mannose onto the glycosylphosphatidylinositol (GPI) core structure; human PIG-Bp is a functional homolog","termid":"PBO:0084276"}


id: PBO:0068374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 167","termid":"PBO:0068374"}


id: FYPO:0002030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cable organization is abnormal. The process normally results in the assembly, arrangement of constituent parts, or disassembly of an actin cable. Actin cables are parallel actin filament bundles nucleated by formin, and are the most common form of actin filament bundles found in yeasts.","definition_xrefs":["PomBase:mah","GO:0070648"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal actin filament bundle organization","termid":"FYPO:0005979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0004803","FYPO:0005447"],"is_obsolete":false,"name":"abnormal actin cable organization","synonyms":[{"name":"abnormal actin cable organisation during vegetative growth","type":"exact"},{"name":"abnormal actin cable organization during mitotic cell cycle","type":"related"},{"name":"abnormal actin cable organization during vegetative growth","type":"exact"},{"name":"abnormal formin-nucleated actin cable organization during vegetative growth","type":"exact"}],"termid":"FYPO:0002030"}


id: FYPO:0006221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division is decreased, and some of the protein is present in the cytoplasm instead.","definition_xrefs":["PMID:26132084","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"decreased protein localization to cell division site","termid":"FYPO:0002869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to cell division site, with protein mislocalized to cytoplasm","synonyms":[{"name":"decreased protein localisation to cell division site, with protein mislocalised to cytoplasm","type":"exact"},{"name":"decreased protein localization to cell division site, with protein mislocalized to cytoplasm, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cell division site, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"decreased protein recruitment to cell division site, with protein mislocalized to cytoplasm","type":"related"},{"name":"reduced protein localization to cell division site, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0006221"}


id: GO:0007175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of EGF-activated receptor activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermal growth factor-activated receptor activity","termid":"GO:0007176"},{"relation_name":"is_a","term_name":"negative regulation of epidermal growth factor receptor signaling pathway","termid":"GO:0042059"},{"relation_name":"is_a","term_name":"negative regulation of protein tyrosine kinase activity","termid":"GO:0061099"},{"relation_name":"is_a","term_name":"negative regulation of signaling receptor activity","termid":"GO:2000272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of epidermal growth factor-activated receptor activity","secondary_identifiers":["GO:0007177"],"synonyms":[{"name":"EGF receptor downregulation","type":"exact"},{"name":"down regulation of epidermal growth factor receptor activity","type":"exact"},{"name":"down-regulation of epidermal growth factor receptor activity","type":"exact"},{"name":"downregulation of epidermal growth factor receptor activity","type":"exact"},{"name":"inhibition of epidermal growth factor receptor activity","type":"narrow"},{"name":"negative regulation of EGF receptor activity","type":"exact"},{"name":"negative regulation of EGFR activity","type":"exact"},{"name":"negative regulation of epidermal growth factor receptor activity","type":"exact"}],"termid":"GO:0007175"}


id: PBO:0028058
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_S-phase_DNA_damage_checkpoint_during_cellular_response_to_hydroxyurea","termid":"PBO:0028058"}


id: PR:O74464
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 39S ribosomal protein L22, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13501:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L22, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.02c","secondary_identifiers":["UniProtKB:O74464"],"synonyms":[{"name":"SPCC1739.02c","type":"related"},{"name":"Spom972h-MRPL22","type":"exact"}],"termid":"PR:O74464"}


id: PBO:0062666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily H member 1","termid":"PBO:0062666"}


id: MONDO:0020595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease or disorder that involves the retroperitoneal space.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete disorder of retroperitoneum (obsolete MONDO:0020595)","secondary_identifiers":["NCIT:C27667","SCTID:734045002"],"synonyms":[{"name":"disease of retroperitoneal space","type":"exact"},{"name":"disease or disorder of retroperitoneal space","type":"exact"},{"name":"disorder of retroperitoneal space","type":"exact"},{"name":"retroperitoneal disease","type":"exact"},{"name":"retroperitoneal disorder","type":"exact"},{"name":"retroperitoneal space disease","type":"exact"},{"name":"retroperitoneal space disease or disorder","type":"exact"}],"termid":"MONDO:0020595","xrefs":{"Monarch":{"xref_id":"0020595"}}}


id: GO:0036055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-succinyl-L-lysyl-[protein] + NAD+ + H2O = 2''-O-succinyl-ADP-D-ribose + nicotinamide + L-lysyl-[protein].","definition_xrefs":["PMID:22076378","RHEA:47668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD-dependent protein lysine deacylase activity","termid":"GO:0141218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"protein-succinyllysine desuccinylase activity","synonyms":[{"name":"peptidyl-succinyllysine desuccinylase activity","type":"exact"},{"name":"succinyl lysine desuccinylase activity","type":"broad"},{"name":"succinyllysine desuccinylase activity","type":"broad"}],"termid":"GO:0036055"}


id: PBO:0027606
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_copper_ion","termid":"PBO:0027606"}


id: PBO:0074674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 59A","termid":"PBO:0074674"}


id: GO:0015506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: nucleoside(out) + H+(out) = nucleoside(in) + H+(in).","definition_xrefs":["TC:2.A.1.10.1","TC:2.A.41.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transmembrane transporter activity","termid":"GO:0005337"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"nucleoside:proton symporter activity","secondary_identifiers":["GO:0015536"],"synonyms":[{"name":"nucleoside permease activity","type":"related"},{"name":"nucleoside:hydrogen ion symporter activity","type":"exact"},{"name":"nucleoside:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015506"}


id: GO:0016485
data:
  {"annotated_genes":["SJAG_03524","SJAG_02214","SJAG_00730","SJAG_02397","SJAG_01471","SJAG_03261","SJAG_04641","SJAG_03910","SJAG_02565","SJAG_01283","SJAG_02809","SJAG_04514","SJAG_04533","SJAG_01868","SJAG_02033","SJAG_01896","SJAG_03648","SJAG_02902","SJAG_03396","SJAG_02432","SJAG_01430","SJAG_00181","SJAG_04583","SJAG_03737","SJAG_02980","SJAG_02867","SJAG_01750","SJAG_01004","SJAG_01838","SJAG_04785","SJAG_05351","SJAG_01179","SJAG_04398","SJAG_06636","SJAG_03121"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78792,79900,81057,91005,102161,105221,107708,108087,112017],"is_not":false,"summary":null,"term":"GO:0016485"},{"annotations":[71835,76665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071586"},{"annotations":[68885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016539"},{"annotations":[90106,77641,79076,102969,105011,115405,79996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034982"},{"annotations":[58449,62698,69809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016540"},{"annotations":[79970,78605,81751,71594,82136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006627"},{"annotations":[62609,79168,66525,69368,77857,77810,70888,65240,75667,66900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006465"},{"annotations":[63153,64650,93706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031638"}]},"cv_name":"biological_process","definition":"Any protein maturation process achieved by the cleavage of a peptide bond or bonds within a protein. Protein maturation is the process leading to the attainment of the full functional capacity of a protein.","definition_xrefs":["GOC:jl","GOC:curators","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis","termid":"GO:0006508"},{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_00730":null,"SJAG_01004":null,"SJAG_01179":null,"SJAG_01283":null,"SJAG_01430":null,"SJAG_01471":null,"SJAG_01750":null,"SJAG_01838":null,"SJAG_01868":null,"SJAG_01896":null,"SJAG_02033":null,"SJAG_02214":null,"SJAG_02397":null,"SJAG_02432":null,"SJAG_02565":null,"SJAG_02809":null,"SJAG_02867":null,"SJAG_02902":null,"SJAG_02980":null,"SJAG_03121":null,"SJAG_03261":null,"SJAG_03396":null,"SJAG_03524":null,"SJAG_03648":null,"SJAG_03737":null,"SJAG_03910":null,"SJAG_04398":null,"SJAG_04514":null,"SJAG_04533":null,"SJAG_04583":null,"SJAG_04641":null,"SJAG_04785":null,"SJAG_05351":null,"SJAG_06636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"protein processing","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-9033500","GO:0051605"],"synonyms":[{"name":"peptidolysis during protein maturation","type":"related"},{"name":"protein maturation by peptide bond cleavage","type":"exact"},{"name":"protein maturation by peptide bond hydrolysis","type":"exact"},{"name":"protein maturation by proteolysis","type":"related"}],"termid":"GO:0016485","terms_by_termid":{"GO:0006465":null,"GO:0006627":null,"GO:0016485":null,"GO:0016539":null,"GO:0016540":null,"GO:0031638":null,"GO:0034982":null,"GO:0071586":null}}


id: PBO:0031868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-ethanolamine phosphate phosphodiesterase (predicted)","termid":"PBO:0031868"}


id: PBO:0113280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pleiotropic negative transcriptional regulator; involved in Ras-cAMP and lysine biosynthetic pathways and nitrogen regulation; involved in retrograde (RTG) mitochondria-to-nucleus signaling","termid":"PBO:0113280"}


id: FYPO:0005361
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the level of large Y-shaped DNA replication intermediates is greater than normal. Large Y-shaped intermediates are formed late in the passive replication of a DNA region by a replication fork moving from outside the region.","definition_xrefs":["PomBase:mah","PMID:19416828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased level of large-Y replication intermediates","synonyms":[{"name":"increased level of large Y-shaped DNA replication intermediates","type":"exact"},{"name":"increased level of large-Y replication intermediates during mitotic cell cycle","type":"related"},{"name":"increased level of large-Y replication intermediates during vegetative growth","type":"exact"}],"termid":"FYPO:0005361"}


id: MONDO:0010183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of methylmalonic acidemia with homocystinuria, an inborn error of vitamin B12 (cobalamin) metabolism characterized by megaloblastic anemia, lethargy, failure to thrive, developmental delay, intellectual deficit and seizures. The disorder is caused by mutations in the LMBRD1 gene (6q13) and is transmitted in an autosomal recessive manner.","definition_xrefs":["Orphanet:79284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylmalonic aciduria and homocystinuria","termid":"MONDO:0016826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0004736","MONDO:0005066","MONDO:0005570"],"is_obsolete":false,"name":"methylmalonic aciduria and homocystinuria type cblF","secondary_identifiers":["GARD:3584","DOID:0050717","MESH:C564747","OMIM:277380","NANDO:2201110","SCTID:80887004","UMLS:C1848578","MEDGEN:336373"],"synonyms":[{"name":"MAHCF","type":"related"},{"name":"cblF defect","type":"exact"},{"name":"cblF methylmalonic acidemia and homocystinuria","type":"related"},{"name":"cobalamin F defect","type":"exact"},{"name":"cobalamin F deficiency","type":"exact"},{"name":"cobalamin F disease","type":"related"},{"name":"cobalamin locus f variant","type":"related"},{"name":"cobalamin, defect in lysosomal release of","type":"related"},{"name":"combined defect in adenosylcobalamin and methylcobalamin synthesis, type cblF","type":"exact"},{"name":"inherited methylmalonic acidemia and homocystinuria","type":"exact"},{"name":"lysosomal membrane cobalamin transporter deficiency","type":"exact"},{"name":"methylmalonic acidemia and homocystinuria, cblF type","type":"related"},{"name":"methylmalonic acidemia with homocystinuria type cblF","type":"related"},{"name":"methylmalonic aciduria and homocystinuria type cblF","type":"exact"},{"name":"methylmalonic aciduria and homocystinuria, cblF type","type":"related"},{"name":"methylmalonic aciduria due to vitamin B12-release defect","type":"related"},{"name":"methylmalonic aciduria with homocystinuria, type cblF","type":"exact"},{"name":"vitamin B12 lysosomal release defect","type":"related"},{"name":"vitamin B12 storage disease","type":"related"}],"termid":"MONDO:0010183","xrefs":{"Monarch":{"xref_id":"0010183"}}}


id: PBO:0045379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP3 divergent transcript","termid":"PBO:0045379"}


id: PBO:0080059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 29","termid":"PBO:0080059"}


id: PBO:0062619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily Y member 1 pseudogene","termid":"PBO:0062619"}


id: GO:0070776
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A histone acetyltransferase complex that has histone H3 acetyltransferase and coactivator activities. Subunits of the human complex include MYST3/MOZ, MYST4/MORF, ING5, EAF6 and one of BRPF1, BRD1/BRPF2 and BRPF3.","definition_xrefs":["PMID:18794358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3 histone acetyltransferase complex","termid":"GO:0070775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MOZ/MORF histone acetyltransferase complex","termid":"GO:0070776"}


id: PBO:0005253
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally induced by stress","termid":"PBO:0005253"}


id: PBO:0030980
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_trimethylation_at_centromere_inner_repeat","termid":"PBO:0030980"}


id: MONDO:0054806
data:
  {"annotated_genes":["SJAG_00768"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87846],"is_not":false,"summary":null,"term":"MONDO:0054806"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00768":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0006025"],"is_obsolete":false,"name":"microcephaly 23, primary, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617985","MEDGEN:1631589","GARD:16280","UMLS:C4693843"],"synonyms":[{"name":"MCPH23","type":"related"},{"name":"microcephaly 23, PRIMARY, autosomal recessive","type":"related"}],"termid":"MONDO:0054806","terms_by_termid":{"MONDO:0054806":null},"xrefs":{"Monarch":{"xref_id":"0054806"}}}


id: PBO:0048047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follistatin like 5","termid":"PBO:0048047"}


id: PBO:0030893
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_starvation_during_vegetative_growth","termid":"PBO:0030893"}


id: PBO:0067449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 571, pseudogene","termid":"PBO:0067449"}


id: PR:Q9UTL9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC144.05 gene.","definition_xrefs":["UniProtKB:Q9UTL9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ATP-dependent helicase C144.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.05","synonyms":[{"name":"Spom972h-SPAC144.05","type":"exact"}],"termid":"PR:Q9UTL9"}


id: GO:0052741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4R)-limonene + O2 + reduced [NADPH--hemoprotein reductase] = (1R,5S)-carveol + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:18957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"},{"relation_name":"is_a","term_name":"limonene monooxygenase activity","termid":"GO:0019113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(R)-limonene 6-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R06119","EC:1.14.14.53","MetaCyc:RXN-10746"],"synonyms":[{"name":"(+)-limonene 6-monooxygenase activity","type":"related"},{"name":"(+)-limonene-6-hydroxylase activity","type":"related"},{"name":"(R)-limonene,NADPH:oxygen oxidoreductase (6-hydroxylating) activity","type":"exact"}],"termid":"GO:0052741"}


id: MOD:01332
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to 6x(13)C labeled L-leucine.","definition_xrefs":["PubMed:12716131","Unimod:188#L"],"direct_ancestors":[{"relation_name":"is_a","term_name":"6x(13)C labeled residue","termid":"MOD:00544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled L-leucine","synonyms":[{"name":"13C(6) Silac label","type":"related"},{"name":"Label:13C(6)","type":"related"}],"termid":"MOD:01332"}


id: MONDO:1010963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cystic hygroma that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystic hygroma, non-human animal","termid":"MONDO:1010225"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystic hygroma, pig","secondary_identifiers":["OMIA:002369-9823"],"termid":"MONDO:1010963","xrefs":{"Monarch":{"xref_id":"1010963"}}}


id: PBO:0050176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 32","termid":"PBO:0050176"}


id: GO:0046013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of resting T cell proliferation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"regulates","term_name":"T cell homeostatic proliferation","termid":"GO:0001777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell homeostatic proliferation","synonyms":[{"name":"regulation of T lymphocyte homeostatic proliferation","type":"exact"},{"name":"regulation of T-cell homeostatic proliferation","type":"exact"},{"name":"regulation of T-lymphocyte homeostatic proliferation","type":"exact"},{"name":"regulation of resting T cell proliferation","type":"exact"}],"termid":"GO:0046013"}


id: GO:0018510
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrophloroglucinol + NADP+ = H+ + NADPH + phloroglucinol.","definition_xrefs":["EC:1.3.1.57","RHEA:10080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"phloroglucinol reductase activity","secondary_identifiers":["UM-BBD_reactionID:r0007","KEGG_REACTION:R05308","MetaCyc:R5-RXN"],"synonyms":[{"name":"dihydrophloroglucinol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0018510"}


id: MONDO:0020653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma arising from the vagina. Morphologic variants include the clear cell, endometrioid, mesonephric, and mucinous adenocarcinoma.","definition_xrefs":["NCIT:C7981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal glandular neoplasm","termid":"MONDO:0001704"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"vaginal carcinoma","termid":"MONDO:0015867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vaginal adenocarcinoma","secondary_identifiers":["MEDGEN:124643","ONCOTREE:VA","UMLS:C0279668"],"synonyms":[{"name":"adenocarcinoma of the vagina","type":"exact"},{"name":"adenocarcinoma of vagina","type":"exact"},{"name":"vagina adenocarcinoma","type":"exact"},{"name":"vaginal adenocarcinoma","type":"exact"}],"termid":"MONDO:0020653","xrefs":{"Monarch":{"xref_id":"0020653"}}}


id: PBO:0018058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSIF transcription elongation factor complex subunit Spt4","termid":"PBO:0018058"}


id: GO:0140896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a double-stranded DNA or RNA from another organism to cytosolic cyclic GMP-AMP (cGAMP) synthase (cGAS) that activates innate immune responses through production of the second messenger cGAMP, which activates the adaptor STING.","definition_xrefs":["PMID:34261128","PMID:34261127","PMID:27648547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0002753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cGAS/STING signaling pathway","termid":"GO:0140896"}


id: GO:1903693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic G1 cell cycle arrest in response to nitrogen starvation.","definition_xrefs":["PMID:15713656","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic G1 cell cycle arrest in response to nitrogen starvation (obsolete GO:1903693)","synonyms":[{"name":"regulation of G1 mitotic cell cycle arrest in response to nitrogen starvation","type":"exact"}],"termid":"GO:1903693"}


id: PBO:0055930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37B","termid":"PBO:0055930"}


id: PBO:0038689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin beta like 2","termid":"PBO:0038689"}


id: MONDO:0001246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of infectious diseases that include epidemic typhus, scrub typhus and murine typhus.","definition_xrefs":["Wikipedia:Typhus"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"Rickettsiaceae infectious disease","termid":"MONDO:0006927"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"typhus","secondary_identifiers":["ICD9:081.9","EFO:0009117","MEDGEN:11976","UMLS:C0041471","GARD:19829","ICD9:081.0","DOID:11256","ICD9:080","icd11.foundation:292650041","Orphanet:102023","SCTID:240613006"],"synonyms":[{"name":"European typhus","type":"related"},{"name":"Mexican typhus","type":"related"},{"name":"Moscow typhus","type":"related"},{"name":"Urban typhus","type":"related"},{"name":"classical typhus","type":"related"},{"name":"classical typhus (fever)","type":"related"},{"name":"endemic flea-borne typhus","type":"narrow"},{"name":"endemic typhus fever","type":"narrow"},{"name":"epidemic (louse-borne) typhus","type":"related"},{"name":"epidemic louse-borne typhus","type":"narrow"},{"name":"epidemic louse-borne typhus fever due to Rickettsia prowazekii","type":"related"},{"name":"exanthematic typhus fever","type":"narrow"},{"name":"exanthematous typhus","type":"related"},{"name":"famine fever","type":"related"},{"name":"flea typhus","type":"narrow"},{"name":"flea-borne rickettsiosis","type":"related"},{"name":"flea-borne typhus","type":"related"},{"name":"gaol fever","type":"related"},{"name":"hospital fever","type":"related"},{"name":"jail fever","type":"related"},{"name":"louse-borne [epidemic] typhus","type":"narrow"},{"name":"louse-borne rickettsiosis","type":"related"},{"name":"louse-borne typhus","type":"related"},{"name":"murine [endemic] typhus","type":"narrow"},{"name":"murine typhus","type":"related"},{"name":"petechial fever","type":"related"},{"name":"prison fever","type":"related"},{"name":"rat flea typhus","type":"related"},{"name":"ship fever","type":"related"},{"name":"shop typhus","type":"related"},{"name":"typhus exanthematique","type":"related"},{"name":"typhus fever","type":"exact"},{"name":"typhus-group rickettsiae disease","type":"exact"},{"name":"typhus-group rickettsiosis","type":"exact"}],"termid":"MONDO:0001246","xrefs":{"Monarch":{"xref_id":"0001246"}}}


id: PBO:0065702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p53 upregulated regulator of p53 levels","termid":"PBO:0065702"}


id: PBO:0017647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cenp-W ortholog","termid":"PBO:0017647"}


id: GO:0010421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Programmed cell death induced by hydrogen peroxide. Programmed cell death is the cell death resulting from activation of endogenous cellular processes.","definition_xrefs":["PMID:16036580","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death in response to reactive oxygen species","termid":"GO:0097468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrogen peroxide-mediated programmed cell death","synonyms":[{"name":"programmed cell death in response to hydrogen peroxide","type":"exact"}],"termid":"GO:0010421"}


id: GO:0090616
data:
  {"annotated_genes":["SJAG_06586","SJAG_02991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100870,116430],"is_not":false,"summary":null,"term":"GO:0090616"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of an mRNA molecule that derives from the mitochondrial genome.","definition_xrefs":["GOC:tb","PMID:25181358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA 3'-end processing","termid":"GO:0000965"},{"relation_name":"is_a","term_name":"mRNA 3'-end processing","termid":"GO:0031124"},{"relation_name":"is_a","term_name":"mitochondrial mRNA processing","termid":"GO:0090615"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02991":null,"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0016071","GO:0140053","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mitochondrial mRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090616","terms_by_termid":{"GO:0090616":null}}


id: PBO:0028423
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_absent_from_cell_during_meiosis","termid":"PBO:0028423"}


id: PR:P17609
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ypt2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P17609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.07c","synonyms":[{"name":"SEC4 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ypt2","type":"exact"}],"termid":"PR:P17609"}


id: MONDO:0030512
data:
  {"annotated_genes":["SJAG_01854"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87916],"is_not":false,"summary":null,"term":"MONDO:0030512"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01854":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 85, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112345","MEDGEN:1794263","OMIM:619686","UMLS:C5562053","Orphanet:631082"],"synonyms":[{"name":"SPG85","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 85","type":"exact"}],"termid":"MONDO:0030512","terms_by_termid":{"MONDO:0030512":null},"xrefs":{"Monarch":{"xref_id":"0030512"}}}


id: PBO:0077150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLC domain containing 1","termid":"PBO:0077150"}


id: PBO:0013077
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement E. coli hisB","termid":"PBO:0013077"}


id: MOD:01186
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to either N-acetyl-L-threonne, or O-acetyl-Lthreonine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylated residue","termid":"MOD:00394"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylated L-threonine","synonyms":[{"name":"AcThr","type":"exact"}],"termid":"MOD:01186"}


id: PBO:0045579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 1","termid":"PBO:0045579"}


id: MONDO:0009033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Temtamy syndrome is a very rare congenital genetic neurological disorder characterized by agenesis/hypoplasia of corpus callosum with developmental abnormalities, ocular disorders, and variable craniofacial and skeletal abnormalities.","definition_xrefs":["Orphanet:1777"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temtamy syndrome","secondary_identifiers":["OMIM:218340","GARD:5688","NCIT:C148371","SCTID:719947004","UMLS:C1857512","MESH:C536959","DOID:0111621","MEDGEN:347474"],"synonyms":[{"name":"Dysmorphism, corpus callosum agenesis and colobomas","type":"related"},{"name":"TEMTAMY syndrome","type":"related"},{"name":"TEMTYS","type":"related"},{"name":"Temtamy-Shalash syndrome","type":"exact"},{"name":"craniofacial dysmorphism with ocular coloboma absent corpus callosum and aortic dilatation","type":"related"},{"name":"craniofacial dysmorphism-coloboma-corpus callosum agenesis syndrome","type":"exact"},{"name":"intellectual disability with or without craniofacial Dysmorphism, ocular coloboma, or abnormal corpus callosum","type":"related"},{"name":"mental retardation with or without craniofacial Dysmorphism, ocular coloboma, or abnormal corpus callosum","type":"related"},{"name":"temtamy syndrome","type":"exact"}],"termid":"MONDO:0009033","xrefs":{"Monarch":{"xref_id":"0009033"}}}


id: PBO:0055639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3078","termid":"PBO:0055639"}


id: PBO:0043880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CREB3 regulatory factor","termid":"PBO:0043880"}


id: PBO:0040402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit G1 pseudogene 3","termid":"PBO:0040402"}


id: GO:0060742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an epithelial cell of the prostate gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"part_of","term_name":"prostate gland development","termid":"GO:0030850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell differentiation involved in prostate gland development","termid":"GO:0060742"}


id: GO:0102760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 6-deoxycathasterone + O2 + a reduced electron acceptor = 6-deoxoteasterone + H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-deoxocathasterone hydroxylase activity (obsolete GO:0102760)","termid":"GO:0102760"}


id: PBO:0068960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 204, pseudogene","termid":"PBO:0068960"}


id: FYPO:0001952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of calcium ions out of a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal calcium export","termid":"FYPO:0001951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased calcium export","synonyms":[{"name":"decreased calcium efflux from cell","type":"exact"},{"name":"decreased calcium export during mitotic cell cycle","type":"related"},{"name":"decreased calcium export during vegetative growth","type":"exact"},{"name":"decreased calcium export from cell","type":"narrow"},{"name":"decreased calcium ion export","type":"exact"},{"name":"decreased cellular calcium export","type":"exact"},{"name":"reduced calcium export","type":"exact"}],"termid":"FYPO:0001952"}


id: FYPO:0006237
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain a normal (i.e. indistinguishable from wild type) number of half-mer polysomes in the cytosol. A half-mer polysome is a complex consisting of an mRNA bound to a single small ribosomal subunit, followed by one or more complete bound ribosomes.","definition_xrefs":["PomBase:mah","PMID:18065650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of macromolecular complex","termid":"FYPO:0006235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal cytosolic half-mer polysome level","synonyms":[{"name":"cytosolic half-mer polysomes present at normal level","type":"exact"},{"name":"normal cytosolic half-mer polysome level during mitotic cell cycle","type":"related"},{"name":"normal cytosolic half-mer polysome level during vegetative growth","type":"exact"},{"name":"normal cytosolic halfmer polysome level","type":"exact"},{"name":"normal level of cytosolic half-mer polysomes","type":"related"}],"termid":"FYPO:0006237"}


id: PBO:0054884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2298","termid":"PBO:0054884"}


id: GO:1904737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fatty acid beta-oxidation using acyl-CoA dehydrogenase.","definition_xrefs":["GOC:TermGenie","PMID:25416781","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fatty acid beta-oxidation","termid":"GO:0032000"},{"relation_name":"is_a","term_name":"regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","termid":"GO:1904735"},{"relation_name":"positively_regulates","term_name":"fatty acid beta-oxidation using acyl-CoA dehydrogenase","termid":"GO:0033539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","synonyms":[{"name":"activation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","type":"narrow"},{"name":"up regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","type":"exact"},{"name":"up-regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","type":"exact"},{"name":"upregulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","type":"exact"}],"termid":"GO:1904737"}


id: PBO:0113299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in aromatic amino acid biosynthesis; up-regulated following GCN4 induction, amino acid starvation, rapamycin treatment in GCN4-dependent manner; promoter contains Gcn4 control response element, which is bound by Gcn4p in vivo","termid":"PBO:0113299"}


id: MONDO:0011440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"essential hypertension","termid":"MONDO:0001134"},{"relation_name":"excluded_subClassOf","term_name":"essential hypertension, genetic","termid":"MONDO:0007781"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertension, essential, susceptibility to, 2","secondary_identifiers":["OMIM:604329","UMLS:C1858497","MEDGEN:388076"],"synonyms":[{"name":"Hyt2","type":"related"},{"name":"hypertension, essential, susceptibility to, 2","type":"exact"},{"name":"hypertension, essential, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0011440","xrefs":{"Monarch":{"xref_id":"0011440"}}}


id: GO:0001649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, a mesodermal or neural crest cell that gives rise to bone.","definition_xrefs":["GOC:jid","CL:0000062","GO_REF:0000034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"ossification","termid":"GO:0001503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoblast differentiation","synonyms":[{"name":"osteoblast cell differentiation","type":"exact"}],"termid":"GO:0001649"}


id: MONDO:0030729
data:
  {"annotated_genes":["SJAG_03542","SJAG_00303","SJAG_00336"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88976,88977,88978],"is_not":false,"summary":null,"term":"MONDO:0030729"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Tessadori-Van-Haaften neurodevelopmental syndrome","termid":"MONDO:0031400"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00303":null,"SJAG_00336":null,"SJAG_03542":null},"genotype_count":0,"is_obsolete":false,"name":"Tessadori-van Haaften neurodevelopmental syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5676922","MEDGEN:1810348","OMIM:619758"],"synonyms":[{"name":"TEVANED1","type":"exact"},{"name":"Tessadori-van Haaften neurodevelopmental syndrome 1","type":"exact"}],"termid":"MONDO:0030729","terms_by_termid":{"MONDO:0030729":null},"xrefs":{"Monarch":{"xref_id":"0030729"}}}


id: PBO:0075525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E5","termid":"PBO:0075525"}


id: PBO:0050915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced transmembrane protein 1","termid":"PBO:0050915"}


id: GO:0046419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving octopine, (N-(1-carboxy-4-guanidinobutyl)-L-alanine), an amino acid derived opine.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete octopine metabolic process (obsolete GO:0046419)","synonyms":[{"name":"octopine metabolism","type":"exact"}],"termid":"GO:0046419"}


id: GO:0016706
data:
  {"annotated_genes":["SJAG_03997","SJAG_03635","SJAG_04580","SJAG_00892","SJAG_03286","SJAG_03664","SJAG_00221","SJAG_00642","SJAG_02401","SJAG_05265","SJAG_03041"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76404,79372],"is_not":false,"summary":null,"term":"GO:0016706"},{"annotations":[72181,89244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051864"},{"annotations":[68275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140680"},{"annotations":[76715,71878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"},{"annotations":[95970,61241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140683"},{"annotations":[96707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106156"},{"annotations":[75783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031543"},{"annotations":[105034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990984"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: A + 2-oxoglutarate + O2 = B + succinate + CO2. This is an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"},{"relation_name":"is_a","term_name":"dioxygenase activity","termid":"GO:0051213"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00642":null,"SJAG_00892":null,"SJAG_02401":null,"SJAG_03041":null,"SJAG_03286":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03997":null,"SJAG_04580":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-oxoglutarate-dependent dioxygenase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-6783455","Reactome:R-HSA-1234164","EC:1.14.11.-","GO:0010302"],"synonyms":[{"name":"2-oxoglutarate dioxygenase activity","type":"exact"},{"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors","type":"exact"}],"termid":"GO:0016706","terms_by_termid":{"GO:0016706":null,"GO:0031543":null,"GO:0034647":null,"GO:0051864":null,"GO:0106156":null,"GO:0140680":null,"GO:0140683":null,"GO:1990984":null}}


id: SO:0001326
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"7_methylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven_methylguanosine","secondary_identifiers":["RNAMOD:031"],"synonyms":[{"name":"7-methylguanosine","type":"exact"},{"name":"m7G","type":"exact"},{"name":"seven methylguanosine","type":"exact"}],"termid":"SO:0001326"}


id: PBO:0081206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZKSCAN7 ZNF cluster antisense RNA 1","termid":"PBO:0081206"}


id: PBO:0071248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 89","termid":"PBO:0071248"}


id: PBO:0083306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps almost completely with the verified ORF TNA1/YGR260W","termid":"PBO:0083306"}


id: PBO:0047836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box R1","termid":"PBO:0047836"}


id: MONDO:0003917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extranodal lymphoma that arises from the heart and/or the pericardium. The majority of the cases are diffuse large B-cell lymphomas. Patients may present with chest pain, heart failure, pericardial effusion, arrhythmia, or syncope.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart cancer","termid":"MONDO:0001340"},{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005267"],"is_obsolete":false,"name":"heart lymphoma","secondary_identifiers":["NCIT:C5368","UMLS:C1332850","DOID:6547","MEDGEN:232331"],"synonyms":[{"name":"Cardiac lymphoma","type":"exact"},{"name":"PCL","type":"exact"},{"name":"Primary heart lymphoma","type":"exact"},{"name":"heart lymphoma","type":"exact"},{"name":"lymphoma of heart","type":"exact"},{"name":"lymphoma of the heart","type":"exact"},{"name":"primary Cardiac lymphoma","type":"exact"}],"termid":"MONDO:0003917","xrefs":{"Monarch":{"xref_id":"0003917"}}}


id: MONDO:0044783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well circumscribed, low grade neoplasm that arises from the breast. It is characterized by the presence of sheets of malignant epithelial cells that are supported by fibrovascular structures. When there is an invasive component present, it is usually a mucinous carcinoma.","definition_xrefs":["NCIT:C6870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast papillary carcinoma","termid":"MONDO:0003532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"solid papillary breast carcinoma","secondary_identifiers":["MEDGEN:236831","ONCOTREE:SPC","UMLS:C1336027"],"synonyms":[{"name":"solid Papillary breast carcinoma","type":"exact"},{"name":"solid Papillary carcinoma of the breast","type":"exact"}],"termid":"MONDO:0044783","xrefs":{"Monarch":{"xref_id":"0044783"}}}


