# terms

id: GO:0006369
data:
  {"annotated_genes":["SJAG_03689","SJAG_04942","SJAG_03624","SJAG_03923","SJAG_03126","SJAG_03179","SJAG_02156","SJAG_02242","SJAG_01713","SJAG_04527","SJAG_04006","SJAG_02037"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57553,61588,76073,76161,81138,109655,117991],"is_not":false,"summary":null,"term":"GO:0006369"},{"annotations":[113950],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904595"},{"annotations":[66363,99160,61944,109423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030847"}]},"cv_name":"biological_process","definition":"A transcription termination process that completes the production of a primary RNA polymerase II transcript.","definition_xrefs":["PMID:27371117","GOC:txnOH","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription termination","termid":"GO:0006353"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01713":null,"SJAG_02037":null,"SJAG_02156":null,"SJAG_02242":null,"SJAG_03126":null,"SJAG_03179":null,"SJAG_03624":null,"SJAG_03689":null,"SJAG_03923":null,"SJAG_04006":null,"SJAG_04527":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"termination of RNA polymerase II transcription","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-73856","GO:0019224"],"synonyms":[{"name":"RNA 3'-end formation by RNA polymerase II","type":"exact"},{"name":"RNA polymerase II transcription termination","type":"exact"},{"name":"RNA polymerase II transcription termination factor activity","type":"related"},{"name":"transcription termination from Pol II promoter","type":"exact"},{"name":"transcription termination from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0006369","terms_by_termid":{"GO:0006369":null,"GO:0030847":null,"GO:1904595":null}}


id: PBO:0060761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4 pseudogene 5","termid":"PBO:0060761"}


id: GO:2001068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to arabinoxylan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylan binding","termid":"GO:2001062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"arabinoxylan binding","termid":"GO:2001068"}


id: PBO:0085547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; required for assembly and maturation of pre-40 S particles; homologous to mammalian ribosomal protein S19, no bacterial homolog; mutations in human RPS19 are associated with Diamond Blackfan anemia; RPS19B has a paralog, RPS19A, that arose from the whole genome duplication","termid":"PBO:0085547"}


id: PBO:0089380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aldo-keto reductase familiy protein","termid":"PBO:0089380"}


id: PBO:0040521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AZGP1 pseudogene 1","termid":"PBO:0040521"}


id: MONDO:0019339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"47, XYY syndrome is a sex chromosome aneuploidy where males receive an additional Y chromosome, and is characterized clinically by tall stature evident from childhood, macrocephaly, facial features (mild hypertelorism, low set ears, a mildly flat malar region), speech delay and an increased risk for social and emotional difficulties, attention deficit hyperactive disorder and autistic spectrum disorder.","definition_xrefs":["Orphanet:8"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"chromosome Y disorder","termid":"MONDO:0700028"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"47,XYY syndrome","secondary_identifiers":["NORD:1871","MedDRA:10056894","NCIT:C85237","MESH:C535317","SCTID:50749006","UMLS:C3266843","GARD:5674","MEDGEN:473794"],"synonyms":[{"name":"47, XYY syndrome","type":"related"},{"name":"47,XYY","type":"exact"},{"name":"47,XYY syndrome","type":"exact"},{"name":"Double Y","type":"exact"},{"name":"Double Y syndrome","type":"exact"},{"name":"XYY Syndrome","type":"exact"},{"name":"XYY karyotype","type":"exact"},{"name":"XYY syndrome","type":"exact"},{"name":"Y disomy","type":"exact"},{"name":"YY syndrome","type":"related"},{"name":"disomy Y","type":"exact"}],"termid":"MONDO:0019339","xrefs":{"Monarch":{"xref_id":"0019339"}}}


id: GO:0000465
data:
  {"annotated_genes":["SJAG_04006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109413],"is_not":false,"summary":null,"term":"GO:0000465"}]},"cv_name":"biological_process","definition":"Exonucleolytic digestion of a pre-rRNA molecule to generate the mature 5'-end of a 5.8S rRNA molecule derived from an originally tricistronic pre-rRNA transcript that contained the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript.","definition_xrefs":["PMID:10690410","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA 5'-end processing","termid":"GO:0000967"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000466"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0044085","GO:0042254","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000465","terms_by_termid":{"GO:0000465":null}}


id: PBO:0089780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA ligase","termid":"PBO:0089780"}


id: PBO:0068539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 142, pseudogene","termid":"PBO:0068539"}


id: PBO:0067334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 426, pseudogene","termid":"PBO:0067334"}


id: SO:0002178
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An SNV that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"substitution_artifact","termid":"SO:0002176"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNV_artifact","synonyms":[{"name":"SNV artifact","type":"exact"}],"termid":"SO:0002178"}


id: GO:0019159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-nicotinamide D-ribonucleotide + H2O = beta-nicotinate D-ribonucleotide + NH3.","definition_xrefs":["EC:3.5.1.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"nicotinamide-nucleotide amidase activity","secondary_identifiers":["MetaCyc:NMNAMIDOHYDRO-RXN","RHEA:12400"],"synonyms":[{"name":"NMN amidohydrolase","type":"narrow"},{"name":"NMN deamidase activity","type":"related"},{"name":"nicotinamide mononucleotide amidohydrolase activity","type":"related"},{"name":"nicotinamide mononucleotide deamidase activity","type":"related"},{"name":"nicotinamide-D-ribonucleotide amidohydrolase activity","type":"related"}],"termid":"GO:0019159"}


id: GO:2000921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of arabinoxylan-containing compound catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of xylan catabolic process","termid":"GO:2001000"},{"relation_name":"regulates","term_name":"arabinoxylan-containing compound catabolic process","termid":"GO:2000888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of arabinoxylan-containing compound catabolic process","synonyms":[{"name":"regulation of arabinoxylan catabolism","type":"exact"}],"termid":"GO:2000921"}


id: PBO:0039888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP42 pseudogene 5","termid":"PBO:0039888"}


id: PBO:0057614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1180","termid":"PBO:0057614"}


id: GO:0050088
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannitol 1-phosphate + NADP+ = D-mannose 6-phosphate + 3 H+ + NADPH.","definition_xrefs":["EC:1.1.1.224","RHEA:14925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"mannose-6-phosphate 6-reductase activity","secondary_identifiers":["KEGG_REACTION:R01817","MetaCyc:MANNOSE-6-PHOSPHATE-6-REDUCTASE-RXN"],"synonyms":[{"name":"6-phosphomannose reductase activity","type":"related"},{"name":"D-mannitol-1-phosphate:NADP+ 6-oxidoreductase activity","type":"related"},{"name":"NADP-dependent mannose-6-P:mannitol-1-P oxidoreductase activity","type":"related"},{"name":"NADPH-dependent M6P reductase activity","type":"related"},{"name":"NADPH-dependent mannose 6-phosphate reductase activity","type":"related"},{"name":"NADPH-mannose-6-P reductase activity","type":"related"},{"name":"mannose-6-phosphate reductase activity","type":"related"}],"termid":"GO:0050088"}


id: GO:1904114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of muscle filament sliding.","definition_xrefs":["GO_REF:0000058","PMID:25717181","GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle filament sliding","termid":"GO:0032971"},{"relation_name":"is_a","term_name":"positive regulation of actin filament-based movement","termid":"GO:1903116"},{"relation_name":"positively_regulates","term_name":"muscle filament sliding","termid":"GO:0030049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of muscle filament sliding","synonyms":[{"name":"activation of muscle filament sliding","type":"narrow"},{"name":"up regulation of muscle filament sliding","type":"exact"},{"name":"up-regulation of muscle filament sliding","type":"exact"},{"name":"upregulation of muscle filament sliding","type":"exact"}],"termid":"GO:1904114"}


id: GO:0061541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a rhabdomere are generated and organized. The rhabdomere is the organelle on the apical surface of a photoreceptor cell that contains the visual pigments.","definition_xrefs":["GOC:dph","PMID:22113834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection morphogenesis","termid":"GO:0048812"},{"relation_name":"part_of","term_name":"photoreceptor cell morphogenesis","termid":"GO:0008594"},{"relation_name":"part_of","term_name":"rhabdomere development","termid":"GO:0042052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhabdomere morphogenesis","termid":"GO:0061541"}


id: PBO:0057000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 92b","termid":"PBO:0057000"}


id: PR:Q9P3T6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps502 gene.","definition_xrefs":["UniProtKB:Q9P3T6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S5-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.10c","synonyms":[{"name":"Spom972h-rps502","type":"exact"}],"termid":"PR:Q9P3T6"}


id: PBO:0089841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, unknown biological role, implicated in protein catabolic process","termid":"PBO:0089841"}


id: GO:0090369
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of ornithine carbamoyltransferase.","definition_xrefs":["GOC:tb","GOC:jp","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0004857","GO:0098772","GO:0003674","GO:0140678","GO:0030234"],"is_obsolete":false,"name":"ornithine carbamoyltransferase inhibitor activity","termid":"GO:0090369"}


id: PBO:0024873
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae ERO1","termid":"PBO:0024873"}


id: GO:0019478
data:
  {"annotated_genes":["SJAG_04827","SJAG_02496"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82156],"is_not":false,"summary":null,"term":"GO:0019478"},{"annotations":[80733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036088"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-amino acids, the D-enantiomers of amino acids.","definition_xrefs":["GOC:jsg","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02496":null,"SJAG_04827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"D-amino acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"D-amino acid breakdown","type":"exact"},{"name":"D-amino acid catabolism","type":"exact"},{"name":"D-amino acid degradation","type":"exact"}],"termid":"GO:0019478","terms_by_termid":{"GO:0019478":null,"GO:0036088":null}}


id: PBO:0082260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Amino acid permease; involved in uptake of cysteine, leucine, isoleucine and valine; BAP3 has a paralog, BAP2, that arose from the whole genome duplication","termid":"PBO:0082260"}


id: GO:1990228
data:
  {"annotated_genes":["SJAG_04397","SJAG_00894","SJAG_00532","SJAG_03932","SJAG_01063","SJAG_01238","SJAG_00186","SJAG_03862","SJAG_01302"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[107809,79310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002144"},{"annotations":[95068,108834,94840,111654,105040,65081,115867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099128"}]},"cv_name":"cellular_component","definition":"A protein complex capable of catalyzing the transfer of sulfur atoms from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:bhm","PMID:17350958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00186":null,"SJAG_00532":null,"SJAG_00894":null,"SJAG_01063":null,"SJAG_01238":null,"SJAG_01302":null,"SJAG_03862":null,"SJAG_03932":null,"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005829","GO:0032991"],"is_obsolete":false,"name":"sulfurtransferase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"SufE complex","type":"narrow"},{"name":"SufE dimer","type":"narrow"},{"name":"ThiF-ThiS complex","type":"related"},{"name":"sulfur transfer complex","type":"exact"}],"termid":"GO:1990228","terms_by_termid":{"GO:0002144":null,"GO:0099128":null}}


id: MONDO:0009246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Friedreich ataxia and congenital glaucoma","secondary_identifiers":["MEDGEN:344787","MESH:C538061","UMLS:C1856688","OMIM:229310"],"synonyms":[{"name":"Friedreich ataxia and congenital glaucoma","type":"exact"}],"termid":"MONDO:0009246","xrefs":{"Monarch":{"xref_id":"0009246"}}}


id: GO:0052594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: aminoacetone + H2O + O2 = methylglyoxal + NH3 + hydrogen peroxide + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete aminoacetone:oxygen oxidoreductase(deaminating) activity (obsolete GO:0052594)","termid":"GO:0052594"}


id: MONDO:0005809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral infection of mice, causing edema and necrosis followed by limb loss.","definition_xrefs":["MESH:D004482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious ectromelia","termid":"MONDO:0005809","xrefs":{"Monarch":{"xref_id":"0005809"}}}


id: PBO:0027706
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_polymerase_processivity_factor_activity","termid":"PBO:0027706"}


id: MONDO:0002127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing of any part of the urethra. It is characterized by decreased urinary stream and often other obstructive voiding symptoms.","definition_xrefs":["MESH:D014525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urethral obstruction","termid":"MONDO:0001556"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethral stricture","secondary_identifiers":["NCIT:C79821","SCTID:76618002","UMLS:C4551691","DOID:1829","icd11.foundation:611219038","HP:0012227","ICD9:598.8","ICD9:598.9","MEDGEN:1641821"],"synonyms":[{"name":"urethral stricture","type":"exact"},{"name":"urethral stricture (disease)","type":"exact"}],"termid":"MONDO:0002127","xrefs":{"Monarch":{"xref_id":"0002127"}}}


id: MONDO:0044718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"alkaline ceramidase 3 deficiency","secondary_identifiers":["GARD:17936","MEDGEN:1622324","Orphanet:502444","OMIM:617762","UMLS:C4540358"],"synonyms":[{"name":"ACER3-related early childhood-onset progressive leukodystrophy","type":"exact"},{"name":"PLDECO","type":"related"},{"name":"leukodystrophy due to alkaline ceramidase 3 deficiency","type":"exact"},{"name":"leukodystrophy, progressive, early childhood-onset","type":"related"}],"termid":"MONDO:0044718","xrefs":{"Monarch":{"xref_id":"0044718"}}}


id: PR:O94347
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent (S)-NAD(P)H-hydrate dehydratase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent (S)-NAD(P)H-hydrate dehydratase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC61.03","secondary_identifiers":["UniProtKB:O94347"],"synonyms":[{"name":"ATP-dependent NAD(P)HX dehydratase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CARKD","type":"exact"}],"termid":"PR:O94347"}


id: MONDO:0015101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"jaw-winking syndrome","termid":"MONDO:0007946"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Marin-Amat syndrome","secondary_identifiers":["GARD:19779","icd11.foundation:727922687","MEDGEN:1842834","UMLS:C5681802","Orphanet:101104"],"termid":"MONDO:0015101","xrefs":{"Monarch":{"xref_id":"0015101"}}}


id: PBO:0081727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 655","termid":"PBO:0081727"}


id: PBO:0088931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein","termid":"PBO:0088931"}


id: PBO:0035783
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_deubiquitination_following_cellular_response_to_methyl_methanesulfonate_during_vegetative_growth","termid":"PBO:0035783"}


id: PBO:0081217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZMIZ1 antisense RNA 1","termid":"PBO:0081217"}


id: MONDO:0013935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Usher syndrome in which the cause of the disease is a mutation in the CIB2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Usher syndrome type 1","termid":"MONDO:0010168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Usher syndrome type 1J","secondary_identifiers":["ICD10CM:H35.5","OMIM:614869","DOID:0110836","GARD:15863","MEDGEN:766858","UMLS:C3553944"],"synonyms":[{"name":"CIB2 Usher syndrome","type":"exact"},{"name":"USH1J","type":"exact"},{"name":"USHER syndrome, type Ij","type":"related"},{"name":"Usher syndrome caused by mutation in CIB2","type":"exact"},{"name":"Usher syndrome type Ij","type":"exact"},{"name":"Usher syndrome, type 1J","type":"related"}],"termid":"MONDO:0013935","xrefs":{"Monarch":{"xref_id":"0013935"}}}


id: GO:1900509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of pentose catabolic process to ethanol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of pentose catabolic process to ethanol (obsolete GO:1900509)","synonyms":[{"name":"regulation of pentose catabolism to ethanol","type":"exact"}],"termid":"GO:1900509"}


id: GO:0018103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein glycosylation process in which a carbohydrate or carbohydrate derivative unit is added to a protein via a C atom.","definition_xrefs":["RESID:AA0217","GOC:pr","PMID:7947762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein glycosylation","termid":"GO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein C-linked glycosylation","synonyms":[{"name":"protein amino acid C-linked glycosylation","type":"exact"}],"termid":"GO:0018103"}


id: GO:0046292
data:
  {"annotated_genes":["SJAG_05256","SJAG_01457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97436,79924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046294"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving formaldehyde (methanal, H2C=O), a colorless liquid or gas with a pungent odor, commonly used as a fixative or an antibacterial agent.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01457":null,"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"formaldehyde metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"formaldehyde metabolism","type":"exact"},{"name":"methanal metabolic process","type":"exact"},{"name":"methanal metabolism","type":"exact"}],"termid":"GO:0046292","terms_by_termid":{"GO:0046294":null}}


id: PBO:0069053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 299, pseudogene","termid":"PBO:0069053"}


id: PBO:0087908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor for glycerol biosynthetic genes; required for the transient induction of glycerol biosynthetic genes GPD1 and GPP2 in response to high osmolarity; targets Hog1p to osmostress responsive promoters; has similarity to Msn1p and Gcr1p","termid":"PBO:0087908"}


id: MONDO:0017087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neural tube defect","termid":"MONDO:0018075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"neurenteric cyst","secondary_identifiers":["Orphanet:268865","UMLS:C0027806","MEDGEN:14343","GARD:20975","icd11.foundation:172158971"],"termid":"MONDO:0017087","xrefs":{"Monarch":{"xref_id":"0017087"}}}


id: PBO:0090332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 2' O-ribose methyltransferase Mrm2","termid":"PBO:0090332"}


id: PBO:0042626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 2A","termid":"PBO:0042626"}


id: GO:0061284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the proximal tubule of the mesonephric nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of mesonephric nephron tubule identity","termid":"GO:0061282"},{"relation_name":"is_a","term_name":"specification of proximal tubule identity","termid":"GO:0072082"},{"relation_name":"part_of","term_name":"mesonephric proximal tubule morphogenesis","termid":"GO:0061276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of mesonephric proximal tubule identity","termid":"GO:0061284"}


id: GO:0005628
data:
  {"annotated_genes":["SJAG_02736","SJAG_00826","SJAG_00430","SJAG_03536","SJAG_04275","SJAG_00405","SJAG_04001","SJAG_03915","SJAG_03250","SJAG_04483","SJAG_03721","SJAG_03079","SJAG_04184","SJAG_04080","SJAG_00971","SJAG_03145","SJAG_03746","SJAG_00821","SJAG_03587","SJAG_02076","SJAG_04948","SJAG_01855","SJAG_03483","SJAG_00974","SJAG_01469","SJAG_02169","SJAG_02368","SJAG_04781","SJAG_01697","SJAG_04922"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90071,92593,93168,93380,94768,95442,95746,96351,97271,98538,99465,102773,103415,103638,105188,105236,106103,106924,109342,111033,111273,116078,118244,118934,119517,121046],"is_not":false,"summary":null,"term":"GO:0005628"},{"annotations":[100742,104851,120561],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070056"},{"annotations":[107236,120562,104852],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070057"}]},"cv_name":"cellular_component","definition":"The prospore membrane is a double-membraned structure that extends from the cytoplasmic face of the spindle pole bodies to encompass the spindle pole bodies and the four nuclear lobes that are formed during meiosis. It helps isolate the meiotic nuclei from the cytoplasm during spore formation and serves as a foundation for the formation of the spore walls. An example of this component is found in Schizosaccharomyces pombe.","definition_xrefs":["ISBN:0879693649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"},{"relation_name":"part_of","term_name":"ascospore-type prospore","termid":"GO:0042764"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00405":null,"SJAG_00430":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_01469":null,"SJAG_01697":null,"SJAG_01855":null,"SJAG_02076":null,"SJAG_02169":null,"SJAG_02368":null,"SJAG_02736":null,"SJAG_03079":null,"SJAG_03145":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03587":null,"SJAG_03721":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04001":null,"SJAG_04080":null,"SJAG_04184":null,"SJAG_04275":null,"SJAG_04483":null,"SJAG_04781":null,"SJAG_04922":null,"SJAG_04948":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"prospore membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"FSM","type":"exact"},{"name":"ascospore-type prospore membrane","type":"exact"},{"name":"forespore membrane","type":"related"}],"termid":"GO:0005628","terms_by_termid":{"GO:0005628":null,"GO:0070056":null,"GO:0070057":null}}


id: _global:axis_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axis_of","secondary_identifiers":["GOREL:0001000"],"termid":"_global:axis_of"}


id: PBO:0053593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 620","termid":"PBO:0053593"}


id: MONDO:0014829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any immunodeficiency-centromeric instability-facial anomalies syndrome in which the cause of the disease is a mutation in the HELLS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency-centromeric instability-facial anomalies syndrome","termid":"MONDO:0000133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019303"],"is_obsolete":false,"name":"immunodeficiency-centromeric instability-facial anomalies syndrome 4","secondary_identifiers":["UMLS:C4310798","OMIM:616911","GARD:16169","DOID:0090011","MEDGEN:934765"],"synonyms":[{"name":"HELLS immunodeficiency-centromeric instability-facial anomalies syndrome","type":"exact"},{"name":"ICF syndrome 4","type":"exact"},{"name":"ICF4","type":"related"},{"name":"immunodeficiency-centromeric instability-FACIAL anomalies syndrome 4","type":"related"},{"name":"immunodeficiency-centromeric instability-Facial anomalies syndrome 4","type":"exact"},{"name":"immunodeficiency-centromeric instability-Facial anomalies syndrome type 4","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome caused by mutation in HELLS","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome type 4","type":"exact"}],"termid":"MONDO:0014829","xrefs":{"Monarch":{"xref_id":"0014829"}}}


id: RO:0002262
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c has-chemical-role r iff c has-role r and r is a chemical role (CHEBI:51086)","direct_ancestors":[{"relation_name":"is_a","term_name":"has_role","termid":"RO:0000087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_chemical_role","termid":"RO:0002262"}


id: MONDO:0005688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the genus campylobacter.","definition_xrefs":["MESH:D002169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"gastroenteritis","termid":"MONDO:0002269"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"campylobacteriosis","secondary_identifiers":["EFO:0007190","icd11.foundation:1012026026","MEDGEN:14296","UMLS:C0006818","SCTID:86500004","DOID:13622"],"termid":"MONDO:0005688","xrefs":{"Monarch":{"xref_id":"0005688"}}}


id: GO:1905768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of double-stranded telomeric DNA binding.","definition_xrefs":["GOC:BHF_telomere","GOC:nc","GOC:TermGenie","PMID:18812185","GOC:BHF","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of double-stranded telomeric DNA binding (obsolete GO:1905768)","synonyms":[{"name":"down regulation of double-stranded telomeric DNA binding","type":"exact"},{"name":"down-regulation of double-stranded telomeric DNA binding","type":"exact"},{"name":"downregulation of double-stranded telomeric DNA binding","type":"exact"},{"name":"inhibition of double-stranded telomeric DNA binding","type":"narrow"}],"termid":"GO:1905768"}


id: GO:0043334
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hexaprenyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-methionine = 2-hexaprenyl-3-methyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:9083048","GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity (obsolete GO:0043334)","synonyms":[{"name":"2-hexaprenyl-6-methoxy-1,4-benzoquinone methylase activity","type":"exact"}],"termid":"GO:0043334"}


id: PBO:0052352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 4B","termid":"PBO:0052352"}


id: GO:0007256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The initiation of the activity of the inactive enzyme JUN kinase kinase (JNKK) activity. JNKKs are involved in a signaling pathway that is primarily activated by cytokines and exposure to environmental stress.","definition_xrefs":["GOC:bf","PMID:11790549"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of JNKK activity (obsolete GO:0007256)","synonyms":[{"name":"activation of JUN kinase kinase activity","type":"exact"},{"name":"positive regulation of JUNKK activity","type":"broad"}],"termid":"GO:0007256"}


id: PBO:0044023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 2 alpha 2","termid":"PBO:0044023"}


id: MONDO:0001955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dysentery that involves protozoan infection.","definition_xrefs":["DOID:14397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysentery","termid":"MONDO:0001517"},{"relation_name":"is_a","term_name":"protozoa infectious disease","termid":"MONDO:0002428"},{"relation_name":"is_a","term_name":"parasitic intestinal disorder","termid":"MONDO:0024270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"protozoal dysentery","secondary_identifiers":["UMLS:C2142761","ICD9:007.8","MEDGEN:1843396"],"termid":"MONDO:0001955","xrefs":{"Monarch":{"xref_id":"0001955"}}}


id: MONDO:1012025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory distress syndrome, non-human animal","termid":"MONDO:1011923"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"respiratory distress syndrome, pig","secondary_identifiers":["OMIA:000101-9823"],"termid":"MONDO:1012025","xrefs":{"Monarch":{"xref_id":"1012025"}}}


id: GO:0052650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-retinol + NADP+ = all-trans-retinal + NADPH + H+.","definition_xrefs":["RHEA:25033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NADP+) activity","termid":"GO:0008106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"all-trans-retinol dehydrogenase (NADP+) activity","secondary_identifiers":["Reactome:R-HSA-5419165","Reactome:R-HSA-74872","Reactome:R-HSA-5615668","KEGG_REACTION:R08379","Reactome:R-HSA-2464803","EC:1.1.1.300","MetaCyc:RXN-10841","Reactome:R-HSA-2464822","Reactome:R-HSA-2465921","Reactome:R-HSA-2466861","Reactome:R-HSA-2465940","Reactome:R-HSA-5623643"],"synonyms":[{"name":"NADP(H)-dependent retinol dehydrogenase/reductase activity","type":"related"},{"name":"NADP-retinol dehydrogenase activity","type":"exact"},{"name":"all-trans retinal reductase activity","type":"broad"},{"name":"all-trans-retinol dehydrogenase activity","type":"broad"},{"name":"retinol dehydrogenase [NADP+] activity","type":"related"},{"name":"retinol dehydrogenase activity","type":"broad"},{"name":"retinol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0052650"}


id: PBO:0048307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 17","termid":"PBO:0048307"}


id: PBO:0027654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_during_cellular_response_to_ionizing_radiation_during_mitotic_S_phase","termid":"PBO:0027654"}


id: GO:0070571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neuron projection regeneration, the regrowth of neuronal processes such as axons or dendrites following their loss or damage.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron projection development","termid":"GO:0010977"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of neuron projection regeneration","termid":"GO:0070570"},{"relation_name":"negatively_regulates","term_name":"neuron projection regeneration","termid":"GO:0031102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron projection regeneration","synonyms":[{"name":"growth cone collapse","type":"related"}],"termid":"GO:0070571"}


id: GO:0014890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring in smooth muscle, that is characterized by a decrease in protein content, fiber diameter, force production and fatigue resistance in response to different conditions such as starvation, aging and disuse.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle adaptation","termid":"GO:0014805"},{"relation_name":"is_a","term_name":"muscle atrophy","termid":"GO:0014889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle atrophy","termid":"GO:0014890"}


id: PBO:0111894
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat protein","termid":"PBO:0111894"}


id: PBO:0060670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudE neurodevelopment protein 1 like 1","termid":"PBO:0060670"}


id: MONDO:0010947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Budd-Chiari syndrome (BCS) is caused by obstruction of hepatic venous outflow involving either the hepatic veins or the terminal segment of the inferior vena cava.","definition_xrefs":["Orphanet:131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic vascular disorder","termid":"MONDO:0002405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"Budd-Chiari syndrome","secondary_identifiers":["NANDO:1200437","ICD9:453.0","OMIM:600880","MESH:D006502","MedDRA:10006537","icd11.foundation:1300118676","MEDGEN:163632","UMLS:C0856761","ICD10CM:I82.0","GARD:5968","SCTID:82385007"],"synonyms":[{"name":"BDCHS","type":"related"},{"name":"Budd-Chiari syndrome","type":"exact"},{"name":"Budd-Chiari syndrome, somatic","type":"exact"},{"name":"membranous obstruction of Inferior vena cava","type":"related"},{"name":"membranous obstruction of the inferior vena cava","type":"related"}],"termid":"MONDO:0010947","xrefs":{"Monarch":{"xref_id":"0010947"}}}


id: GO:0030707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that occurs during oogenesis involving the ovarian follicle cells, somatic cells which surround the germ cells of an ovary. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:10822261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicle cell of egg chamber development","termid":"GO:0030707"}


id: PBO:0064740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 76","termid":"PBO:0064740"}


id: PBO:0030790
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_volume_spheroid_vegetative_cell","termid":"PBO:0030790"}


id: GO:0150020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a dendritic tree are generated on the basal neuron side and organized into dendritic branches.","definition_xrefs":["GOC:bc","PMID:22683681","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite arborization","termid":"GO:0140059"},{"relation_name":"is_a","term_name":"basal dendrite morphogenesis","termid":"GO:0150019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basal dendrite arborization","termid":"GO:0150020"}


id: GO:0097548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled shedding of a seed.","definition_xrefs":["GOC:lmo"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abscission","termid":"GO:0009838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed abscission","termid":"GO:0097548"}


id: GO:0047297
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-oxo acid + L-asparagine = an amino acid + 2-oxosuccinamate.","definition_xrefs":["RHEA:19813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016769","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"asparagine-oxo-acid transaminase activity","secondary_identifiers":["EC:2.6.1.14","MetaCyc:2.6.1.14-RXN"],"synonyms":[{"name":"L-asparagine:2-oxo-acid aminotransferase activity","type":"related"},{"name":"asparagine--oxo-acid aminotransferase activity","type":"related"},{"name":"asparagine-keto acid aminotransferase activity","type":"related"},{"name":"asparagine-oxo-acid aminotransferase activity","type":"exact"}],"termid":"GO:0047297"}


id: PBO:0003756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Clg1 (predicted)","termid":"PBO:0003756"}


id: PBO:0038920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor G2","termid":"PBO:0038920"}


id: PATO:0000965
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pattern quality of inhering in a bearer by virtue of the correspondence in size, shape, and relative position of the bearer's parts on opposite sides of a dividing line or median plane or about a center or axis.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regular spatial pattern","termid":"PATO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symmetry","termid":"PATO:0000965"}


id: PBO:0001426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Mra1","termid":"PBO:0001426"}


id: GO:0050636
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 16-epivellosimine + acetyl-CoA = CoA + vinorine.","definition_xrefs":["EC:2.3.1.160","RHEA:24016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"vinorine synthase activity","secondary_identifiers":["KEGG_REACTION:R05876","MetaCyc:2.3.1.160-RXN"],"synonyms":[{"name":"acyl-CoA:16-epivellosimine O-acetyltransferase (cyclizing)","type":"related"}],"termid":"GO:0050636"}


id: GO:0048618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the foregut are generated and organized, during the post-embryonic phase.","definition_xrefs":["GOC:rc","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"foregut morphogenesis","termid":"GO:0007440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic foregut morphogenesis","termid":"GO:0048618"}


id: GO:0010394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving homogalacturonan, a pectin characterized by a backbone of alpha-(1->4)-linked D-galacturonic acid residues that can be methyl-esterified at C-6 and carry acetyl groups on O-2 and O-3.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galacturonan metabolic process","termid":"GO:0010393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"homogalacturonan metabolic process","synonyms":[{"name":"homogalacturonan metabolism","type":"exact"}],"termid":"GO:0010394"}


id: PBO:0068880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 120, pseudogene","termid":"PBO:0068880"}


id: PATO:0000227
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000227 motor performance (obsolete PATO:0000227)","termid":"PATO:0000227"}


id: GO:0042270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of protecting a cell from natural killer cell mediated cytotoxicity.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of natural killer cell mediated cytotoxicity","termid":"GO:0045953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protection from natural killer cell mediated cytotoxicity","synonyms":[{"name":"protection from NK cell mediated cell death","type":"exact"},{"name":"protection from NK cell mediated cell killing","type":"exact"},{"name":"protection from NK cell mediated cytolysis","type":"related"},{"name":"protection from NK cell mediated cytotoxicity","type":"exact"},{"name":"protection from natural killer cell mediated cell death","type":"exact"},{"name":"protection from natural killer cell mediated cell killing","type":"exact"},{"name":"protection from natural killer cell mediated cytolysis","type":"related"}],"termid":"GO:0042270"}


id: PBO:0088680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi mannan polymerase I complex subunit Anp1","termid":"PBO:0088680"}


id: MONDO:0005284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of multiple sclerosis characterized by a progressive deterioration in neurologic function which is in contrast to the more typical relapsing remitting form. If the clinical course is free of distinct remissions, it is referred to as primary progressive multiple sclerosis. When the progressive decline is punctuated by acute exacerbations, it is referred to as progressive relapsing multiple sclerosis. The term secondary progressive multiple sclerosis is used when relapsing remitting multiple sclerosis evolves into the chronic progressive form. (From Ann Neurol 1994;36 Suppl:S73-S79; Adams et al., Principles of Neurology, 6th ed, pp903-914)","definition_xrefs":["MESH:D020528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple sclerosis","termid":"MONDO:0005301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005559"],"is_obsolete":false,"name":"chronic progressive multiple sclerosis","secondary_identifiers":["SCTID:230373008","MEDGEN:140733","EFO:0003840","UMLS:C0393665"],"termid":"MONDO:0005284","xrefs":{"Monarch":{"xref_id":"0005284"}}}


id: PATO:0001922
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the rear of an organism.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalised posteriorly","termid":"PATO:0001922"}


id: GO:0004049
data:
  {"annotated_genes":["SJAG_02505","SJAG_01455"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62832,70059],"is_not":false,"summary":null,"term":"GO:0004049"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: chorismate + L-glutamine = anthranilate + pyruvate + L-glutamate.","definition_xrefs":["EC:4.1.3.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01455":null,"SJAG_02505":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"anthranilate synthase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["RHEA:21732","MetaCyc:ANTHRANSYN-RXN"],"synonyms":[{"name":"anthranilate synthetase activity","type":"related"},{"name":"chorismate pyruvate-lyase (amino-accepting) activity","type":"related"}],"termid":"GO:0004049","terms_by_termid":{"GO:0004049":null}}


id: MONDO:1010597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperthyroidism that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperthyroidism, non-human animal","termid":"MONDO:1010055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperthyroidism, rabbit","secondary_identifiers":["OMIA:000511-9986"],"termid":"MONDO:1010597","xrefs":{"Monarch":{"xref_id":"1010597"}}}


id: PBO:0042696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chymotrypsin like elastase 2B","termid":"PBO:0042696"}


id: MONDO:0005416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Noninflammatory degenerative disease of the knee joint consisting of three large categories: conditions that block normal synchronous movement, conditions that produce abnormal pathways of motion, and conditions that cause stress concentration resulting in changes to articular cartilage. (Crenshaw, Campbell's Operative Orthopaedics, 8th ed, p2019)","definition_xrefs":["MESH:D020370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteoarthritis","termid":"MONDO:0005178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis, knee","secondary_identifiers":["UMLS:C0409959","EFO:0004616","MEDGEN:98371"],"termid":"MONDO:0005416","xrefs":{"Monarch":{"xref_id":"0005416"}}}


id: MONDO:0012207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"umbilicus, familial flat","secondary_identifiers":["MEDGEN:332265","OMIM:609164","UMLS:C1836682","MESH:C537059"],"synonyms":[{"name":"flat umbilicus autosomal dominant","type":"related"},{"name":"flat umbilicus familial","type":"related"},{"name":"flat umbilicus, autosomal dominant","type":"related"},{"name":"umbilicus, familial flat","type":"exact"}],"termid":"MONDO:0012207","xrefs":{"Monarch":{"xref_id":"0012207"}}}


id: PBO:0061045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA like domain containing 1","termid":"PBO:0061045"}


id: MONDO:0007317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chlorpropamide-alcohol flushing (obsolete MONDO:0007317)","secondary_identifiers":["OMIM:118430"],"synonyms":[{"name":"CHLORPROPAMIDE-alcohol flushing","type":"related"},{"name":"CPAF","type":"related"},{"name":"chlorpropamide-alcohol flushing","type":"exact"}],"termid":"MONDO:0007317","xrefs":{"Monarch":{"xref_id":"0007317"}}}


id: PBO:0116410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 family protein 6","termid":"PBO:0116410"}


id: PBO:0084939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mucin family member that functions as an osmosensor in the HOG pathway; large, highly glycosylated protein that functions redundantly with Msb2p in Sho1p-mediated osmostresss induction of the HOG signaling pathway; cytoplasmic domain interacts with Ahk1p a scaffold protein that prevents cross talk with the Kss1p MAPK of the filamentous growth pathway; mutant displays defects in beta-1,3 glucan synthesis and bud site selection","termid":"PBO:0084939"}


id: MONDO:0007755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperimmunoglobulin G1(A1) syndrome","secondary_identifiers":["UMLS:C1840429","OMIM:144120","MEDGEN:374465","MESH:C564173"],"synonyms":[{"name":"Immunoglobulin heavy chain regulator","type":"related"},{"name":"hyperimmunoglobulin G1 syndrome","type":"exact"},{"name":"hyperimmunoglobulin G1(A1) syndrome","type":"exact"}],"termid":"MONDO:0007755","xrefs":{"Monarch":{"xref_id":"0007755"}}}


id: GO:0015867
data:
  {"annotated_genes":["SJAG_02050","SJAG_00612"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104790,59112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"}]},"cv_name":"biological_process","definition":"The directed movement of ATP, adenosine triphosphate, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_02050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"ATP transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0015867","terms_by_termid":{"GO:1990544":null}}


id: GO:0035750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, and/or maintained in, the abaxonal region of the myelin sheath. The abaxonal region is the region of the myelin sheath furthest from the axon.","definition_xrefs":["PMID:20237282","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to myelin sheath abaxonal region","synonyms":[{"name":"protein localisation to myelin sheath abaxonal region","type":"exact"}],"termid":"GO:0035750"}


id: GO:1900211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal cell apoptotic process involved in metanephros development.","definition_xrefs":["GOC:yaf","GOC:mtg_apoptosis","GOC:mtg_kidney_jan10","GOC:TermGenie","PMID:17314325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in development","termid":"GO:1904748"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process","termid":"GO:2001053"},{"relation_name":"regulates","term_name":"mesenchymal cell apoptotic process involved in metanephros development","termid":"GO:1900200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell apoptotic process involved in metanephros development","synonyms":[{"name":"regulation of mesenchymal cell apoptosis involved in metanephros development","type":"narrow"}],"termid":"GO:1900211"}


id: PR:Q9US24
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-like protein ATG12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00908","PRO:DNx","PANTHER:PTHR13385:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like protein ATG12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1783.06c","secondary_identifiers":["UniProtKB:Q9US24"],"synonyms":[{"name":"Spom972h-ATG12","type":"exact"},{"name":"autophagy-related protein 12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US24"}


id: MONDO:0004454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital mesoblastic nephroma characterized by increased cellularity, sheet-like proliferation of fibroblastic cells, and increased mitotic activity. Necrotic changes are commonly present.","definition_xrefs":["NCIT:C39815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital mesoblastic nephroma","termid":"MONDO:0017043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"cellular congenital mesoblastic nephroma","secondary_identifiers":["UMLS:C1320471","MEDGEN:729112","DOID:8082"],"synonyms":[{"name":"cellular congenital mesoblastic nephroma","type":"exact"}],"termid":"MONDO:0004454","xrefs":{"Monarch":{"xref_id":"0004454"}}}


id: PR:O74828
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ESF1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12202:SF0","OMA:SCHPO02698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA-processing protein esf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.01c","secondary_identifiers":["UniProtKB:O74828"],"synonyms":[{"name":"Spom972h-ESF1","type":"exact"}],"termid":"PR:O74828"}


id: MONDO:0017123
data:
  {"annotated_genes":["SJAG_05194"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008822"}]},"cv_name":"mondo","definition":"Arthrogryposis-Renal dysfunction-Cholestasis (ARC) syndrome is a multisystem disorder, characterized by neurogenic arthrogryposis multiplex congenita, renal tubular dysfunction and neonatal cholestasis with low serum gamma-glutamyl transferase activity.","definition_xrefs":["Orphanet:2697"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita 2, neurogenic type","termid":"MONDO:0008823"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"inborn disorder of bilirubin metabolism","termid":"MONDO:0017755"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"arthrogryposis-renal dysfunction-cholestasis syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4551984","OMIMPS:208085","GARD:794","MESH:C535382","DOID:0050763","SCTID:720513002","MEDGEN:1647210"],"synonyms":[{"name":"ARC syndrome","type":"exact"},{"name":"arthrogryposis - renal dysfunction - cholestasis","type":"related"},{"name":"arthrogryposis multiplex congenita, renal dysfunction, and cholestasis","type":"related"},{"name":"arthrogryposis renal dysfunction cholestasis syndrome","type":"related"},{"name":"arthrogryposis, renal dysfunction and cholestasis (ARC) syndrome","type":"exact"},{"name":"arthrogryposis, renal dysfunction, and cholestasis","type":"exact"},{"name":"arthrogryposis-renal dysfunction-cholestasis","type":"exact"}],"termid":"MONDO:0017123","terms_by_termid":{"MONDO:0008822":null},"xrefs":{"Monarch":{"xref_id":"0017123"}}}


id: MONDO:0005634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute conjunctivitis that is characterized by bleeding into the conjunctiva.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute conjunctivitis","termid":"MONDO:0001214"},{"relation_name":"is_a","term_name":"viral conjunctivitis","termid":"MONDO:0043541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acute hemorrhagic conjunctivitis","secondary_identifiers":["NCIT:C34505","SCTID:398264003","ICD9:077.4","MESH:D003232","UMLS:C0009765","DOID:11227","MEDGEN:1094","EFO:0007131"],"synonyms":[{"name":"Apollo disease","type":"exact"},{"name":"epidemic hemorrhagic conjunctivitis","type":"exact"},{"name":"viral conjunctivitis","type":"related"}],"termid":"MONDO:0005634","xrefs":{"Monarch":{"xref_id":"0005634"}}}


id: PBO:0031049
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_modification","termid":"PBO:0031049"}


id: MONDO:0020188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital absence of the eyebrow/eyelashes (obsolete MONDO:0020188)","secondary_identifiers":["Orphanet:98598"],"termid":"MONDO:0020188","xrefs":{"Monarch":{"xref_id":"0020188"}}}


id: PBO:0055344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2772","termid":"PBO:0055344"}


id: PBO:0091659
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ferric Reductase in Pombe","termid":"PBO:0091659"}


id: SO:0000246
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A attribute describing the addition of a poly A tail to the 3' end of a mRNA molecule.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_attribute","termid":"SO:0000863"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyadenylated","termid":"SO:0000246"}


id: GO:0140785
data:
  {"annotated_genes":["SJAG_03405"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140786"}]},"cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of an amino acid.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03405":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0140299","GO:0098772"],"is_obsolete":false,"name":"amino acid sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"amino acid sensing activity","type":"exact"}],"termid":"GO:0140785","terms_by_termid":{"GO:0140786":null}}


id: GO:0035814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the amount of sodium excreted in urine over a unit of time.","definition_xrefs":["GOC:yaf","GOC:mtg_25march11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of renal sodium excretion","termid":"GO:0035813"},{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"renal sodium excretion","termid":"GO:0035812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of renal sodium excretion","termid":"GO:0035814"}


id: MONDO:0009027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cramps, familial adolescent","secondary_identifiers":["OMIM:218050","MEDGEN:347475","UMLS:C1857533"],"synonyms":[{"name":"cramps, familial adolescent","type":"exact"}],"termid":"MONDO:0009027","xrefs":{"Monarch":{"xref_id":"0009027"}}}


id: MONDO:0001729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Meniere disease","termid":"MONDO:0007972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"active cochlear Meniere disease","secondary_identifiers":["SCTID:194349005","ICD9:386.02","MEDGEN:509990","UMLS:C0155497","DOID:13492"],"synonyms":[{"name":"active Meniere's disease, cochlear","type":"exact"},{"name":"active cochlear Meniere disease","type":"exact"},{"name":"active cochlear Meniere's disease","type":"exact"},{"name":"cochlear active Mnire's disease","type":"exact"}],"termid":"MONDO:0001729","xrefs":{"Monarch":{"xref_id":"0001729"}}}


id: PBO:0087060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L2A; homologous to mammalian ribosomal protein L2 and bacterial L2; RPL2A has a paralog, RPL2B, that arose from the whole genome duplication","termid":"PBO:0087060"}


id: PATO:0000908
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000908 f2 sterile (obsolete PATO:0000908)","synonyms":[{"name":"F2 infertile","type":"related"}],"termid":"PATO:0000908"}


id: PBO:0041647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit alpha2delta 2","termid":"PBO:0041647"}


id: MONDO:0044885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign adipose tissue neoplasm of the tonsils.","definition_xrefs":["NCIT:C5989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"},{"relation_name":"is_a","term_name":"benign neoplasm of tonsil","termid":"MONDO:0021513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"tonsillar lipoma","secondary_identifiers":["UMLS:C1336764","MEDGEN:234431"],"synonyms":[{"name":"lipoma of the tonsil","type":"exact"},{"name":"lipoma of tonsil","type":"exact"},{"name":"tonsil lipoma","type":"exact"},{"name":"tonsillar lipoma","type":"exact"}],"termid":"MONDO:0044885","xrefs":{"Monarch":{"xref_id":"0044885"}}}


id: PBO:0072114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 3","termid":"PBO:0072114"}


id: PBO:0054670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2076","termid":"PBO:0054670"}


id: PBO:0004094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic RNA-binding protein 1","termid":"PBO:0004094"}


id: PBO:0109623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM and PDZ domain containing 2B (pseudogene)","termid":"PBO:0109623"}


id: GO:0035268
data:
  {"annotated_genes":["SJAG_04316","SJAG_04053","SJAG_01264"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94917,103474,107919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035269"}]},"cv_name":"biological_process","definition":"The addition of a mannose residue to a protein acceptor molecule.","definition_xrefs":["GOC:pr","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein glycosylation","termid":"GO:0006486"},{"relation_name":"is_a","term_name":"mannosylation","termid":"GO:0097502"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01264":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein mannosylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein amino acid mannosylation","type":"exact"}],"termid":"GO:0035268","terms_by_termid":{"GO:0035269":null}}


id: GO:0140744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the synthesis of a lncRNA.","definition_xrefs":["PMID:33767452","PMID:33913806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"is_a","term_name":"regulation of lncRNA transcription","termid":"GO:0140743"},{"relation_name":"negatively_regulates","term_name":"lncRNA transcription","termid":"GO:0140742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006355","GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"negative regulation of lncRNA transcription","termid":"GO:0140744"}


id: MONDO:0001345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A substance abuse that involves the recurring use of antidepressant drugs despite negative consequences.","definition_xrefs":["DOID:11718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance abuse","termid":"MONDO:0002491"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antidepressant type abuse","secondary_identifiers":["MEDGEN:572698","UMLS:C0338677","ICD9:305.8"],"termid":"MONDO:0001345","xrefs":{"Monarch":{"xref_id":"0001345"}}}


id: GO:0060285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell motility due to the motion of one or more eukaryotic cilia. A eukaryotic cilium is a specialized organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic (plasma) membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole.","definition_xrefs":["GOC:cilia","GOC:dgh","GOC:krc","GOC:mlg","GOC:mtg_cambridge_2013","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium or flagellum-dependent cell motility","termid":"GO:0001539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cilium-dependent cell motility","secondary_identifiers":["GO:0071974"],"synonyms":[{"name":"ciliary cell motility","type":"related"},{"name":"cilium cell motility","type":"exact"},{"name":"microtubule-based flagellar cell motility","type":"exact"}],"termid":"GO:0060285"}


id: PBO:0030458
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nickel_import","termid":"PBO:0030458"}


id: PBO:0079672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 V2 pseudogene 2","termid":"PBO:0079672"}


id: PBO:0056269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEF2 activating motif and SAP domain containing transcriptional regulator","termid":"PBO:0056269"}


id: PBO:0043428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic nucleotide gated channel subunit beta 3","termid":"PBO:0043428"}


id: GO:0050939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of early stripe melanocyte differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of melanocyte differentiation","termid":"GO:0045634"},{"relation_name":"regulates","term_name":"early stripe melanocyte differentiation","termid":"GO:0050933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of early stripe melanocyte differentiation","synonyms":[{"name":"regulation of early stripe melanophore differentiation","type":"exact"}],"termid":"GO:0050939"}


id: PBO:0061605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUCB1 antisense RNA 1","termid":"PBO:0061605"}


id: MONDO:0800296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcornea, rod-cone dystrophy, cataract, and posterior staphyloma 2","secondary_identifiers":["UMLS:C5435648","MEDGEN:1763512"],"synonyms":[{"name":"MRCS2","type":"exact"}],"termid":"MONDO:0800296","xrefs":{"Monarch":{"xref_id":"0800296"}}}


id: PBO:0039858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 23","termid":"PBO:0039858"}


id: PBO:0081612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 540","termid":"PBO:0081612"}


id: PBO:0029676
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_septum_morphology_during_vegetative_growth","termid":"PBO:0029676"}


id: MONDO:0044314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 78","secondary_identifiers":["GARD:16229","MEDGEN:1378790","UMLS:C4479481","OMIM:617433"],"synonyms":[{"name":"RP78","type":"related"},{"name":"retinitis pigmentosa 78","type":"exact"}],"termid":"MONDO:0044314","xrefs":{"Monarch":{"xref_id":"0044314"}}}


id: GO:0100016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates thiamine biosynthetic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of thiamine biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100016)","termid":"GO:0100016"}


id: GO:1903366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fear response.","definition_xrefs":["PMID:8677262","GO_REF:0000058","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of fear response","termid":"GO:1903365"},{"relation_name":"negatively_regulates","term_name":"fear response","termid":"GO:0042596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fear response","synonyms":[{"name":"down regulation of fear response","type":"exact"},{"name":"down regulation of physiological fear response","type":"exact"},{"name":"down-regulation of fear response","type":"exact"},{"name":"down-regulation of physiological fear response","type":"exact"},{"name":"downregulation of fear response","type":"exact"},{"name":"downregulation of physiological fear response","type":"exact"},{"name":"inhibition of fear response","type":"narrow"},{"name":"inhibition of physiological fear response","type":"narrow"},{"name":"negative regulation of physiological fear response","type":"exact"}],"termid":"GO:1903366"}


id: MONDO:0018244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited obesity","termid":"MONDO:0019182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obesity due to SIM1 deficiency","secondary_identifiers":["GARD:21580","MEDGEN:1680592","UMLS:C5191050","Orphanet:369873"],"termid":"MONDO:0018244","xrefs":{"Monarch":{"xref_id":"0018244"}}}


id: PBO:0048405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAS8 antisense RNA 1","termid":"PBO:0048405"}


id: MONDO:1010652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pelger-Huet anomaly that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Pelger-Huet anomaly, non-human animal","termid":"MONDO:1010077"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pelger-Huet anomaly, rabbit","secondary_identifiers":["OMIA:000783-9986"],"termid":"MONDO:1010652","xrefs":{"Monarch":{"xref_id":"1010652"}}}


id: PBO:0087370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spt4p/5p (DSIF) transcription elongation factor complex subunit; the Spt4/5 complex binds to ssRNA in a sequence-specific manner, and along with RNAP I and II has multiple roles regulating transcriptional elongation, RNA processing, quality control, and transcription-coupled repair; localizes to kinetochores and heterochromatin, influencing chromosomal dynamics and silencing; required for transcription through long trinucleotide repeats in ORFs and non-protein coding regions","termid":"PBO:0087370"}


id: MONDO:0020149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare eye disease due to a differentiation anomaly (obsolete MONDO:0020149)","secondary_identifiers":["Orphanet:98558"],"termid":"MONDO:0020149","xrefs":{"Monarch":{"xref_id":"0020149"}}}


id: PR:000037082
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tropomyosin cdc8 (Schizosaccharomyces pombe) that has not been post-translationally modified to include an acetylated N-terminal methionine.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropomyosin cdc8 (Schizosaccharomyces pombe)","termid":"PR:000027986"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc8/UnMod(M1)","pombase_gene_id":"SPAC27F1.02c","synonyms":[{"name":"PomBase_original_PRO_term_name: tropomyosin cdc8, non-acetylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cdc8/AcRes-","type":"exact"},{"name":"cdc8/UnMod(M1)","type":"exact"}],"termid":"PR:000037082"}


id: MONDO:1012760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Low plasma cholesterol concentration that occurs in cattle due to a mutation in the APOB gene mutation. The “cholesterol deficiency” is a consequence of a decreased ability to be incorporated into lipoproteins for transport in circulation.","definition_xrefs":["PMID:31477289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholesterol deficiency, APOB-related, cattle","secondary_identifiers":["OMIA:001965-9913"],"synonyms":[{"name":"Holstein cholesterol deficiency","type":"narrow"}],"termid":"MONDO:1012760","xrefs":{"Monarch":{"xref_id":"1012760"}}}


id: GO:0015710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of tellurite into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"tellurite transport","termid":"GO:0015710"}


id: PBO:0036087
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_centromere_during_vegetative_growth","termid":"PBO:0036087"}


id: PBO:0067890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 192","termid":"PBO:0067890"}


id: PBO:0034318
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-receives_input_from","termid":"PBO:0034318"}


id: MONDO:0002942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"sebaceous basal cell carcinoma","secondary_identifiers":["NCIT:C4346","DOID:4286","UMLS:C0334683","MEDGEN:83180"],"synonyms":[{"name":"skin basosebaceous basal cell carcinoma","type":"exact"}],"termid":"MONDO:0002942","xrefs":{"Monarch":{"xref_id":"0002942"}}}


id: PBO:0027225
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-bent_vegetative_cell","termid":"PBO:0027225"}


id: GO:0044189
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic host cells are homogenized and that sediment on centrifugation at 100000 g.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete host cell microsome (obsolete GO:0044189)","synonyms":[{"name":"host cell microsomal membrane","type":"exact"},{"name":"host cell microsome","type":"exact"}],"termid":"GO:0044189"}


id: GO:0140833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + RNA polymerase II large subunit CTD heptapeptide repeat (consensus YSPTSPS) = ADP + H+ + RNA polymerase II large subunit phosphotyrosine (position 1).","definition_xrefs":["PMID:28248323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat kinase activity","termid":"GO:0008353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0004672","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat Y1 kinase activity","synonyms":[{"name":"RNA polymerase II C-terminal domain Y1 kinase activity","type":"exact"}],"termid":"GO:0140833"}


id: PBO:0028451
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_multinucleate_multiseptate_cell,_single_septa_between_nuclei,_during_stationary_phase","termid":"PBO:0028451"}


id: PBO:0066548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 11","termid":"PBO:0066548"}


id: PBO:0088741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein trafficking protein Pga2","termid":"PBO:0088741"}


id: PATO:0001606
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A coating which is oily and slippery.","definition_xrefs":[".answers.com:.answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coating","termid":"PATO:0002012"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"greasy","termid":"PATO:0001606"}


id: PBO:0079103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSC complex subunit 1","termid":"PBO:0079103"}


id: GO:0046307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of Z-phenylacetaldoxime, a member of the glucosinolate group of compounds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"Z-phenylacetaldoxime metabolic process","termid":"GO:0018983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Z-phenylacetaldoxime biosynthetic process","synonyms":[{"name":"Z-phenylacetaldoxime anabolism","type":"exact"},{"name":"Z-phenylacetaldoxime biosynthesis","type":"exact"},{"name":"Z-phenylacetaldoxime formation","type":"exact"},{"name":"Z-phenylacetaldoxime synthesis","type":"exact"}],"termid":"GO:0046307"}


id: PBO:0069724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1005, pseudogene","termid":"PBO:0069724"}


id: PBO:0012588
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae IRA1","termid":"PBO:0012588"}


id: SO:0001250
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A fingerprint_map is a physical map composed of restriction fragments.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"restriction_fragment","termid":"SO:0000412"},{"relation_name":"is_a","term_name":"fragment_assembly","termid":"SO:0001249"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fingerprint_map","synonyms":[{"name":"BACmap","type":"exact"},{"name":"FPC","type":"exact"},{"name":"FPCmap","type":"exact"},{"name":"fingerprint map","type":"exact"},{"name":"restriction map","type":"exact"}],"termid":"SO:0001250"}


id: MONDO:0060670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyotrophic lateral sclerosis, susceptibility to, 25","secondary_identifiers":["OMIM:617921","MEDGEN:1633917","DOID:0081379","UMLS:C4693609"],"synonyms":[{"name":"ALS25","type":"related"},{"name":"amyotrophic lateral sclerosis, susceptibility to, 25","type":"exact"}],"termid":"MONDO:0060670","xrefs":{"Monarch":{"xref_id":"0060670"}}}


id: GO:0140985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a chemorepellent and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["PMID:30462573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled chemorepellent receptor activity","synonyms":[{"name":"G protein chemorepellent receptor activity","type":"exact"},{"name":"G-protein chemorepellent receptor activity","type":"exact"},{"name":"G-protein coupled chemorepellent receptor activity","type":"exact"}],"termid":"GO:0140985"}


id: GO:0002927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involved in the biosynthesis of archaeosine, an archaea-specific modified base found at position 15 in the D-loop of certain archaeal tRNAs.","definition_xrefs":["GOC:hjd","PMID:20129918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"},{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"archaeosine-tRNA biosynthetic process","termid":"GO:0002927"}


id: MONDO:0020757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A migraine disorder characterized by an aura that includes motor weakness and the absence of family history.","definition_xrefs":["NCIT:C117011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial or sporadic hemiplegic migraine","termid":"MONDO:0018925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporadic hemiplegic migraine","secondary_identifiers":["icd11.foundation:1303340532","MEDGEN:318737","UMLS:C1832903"],"synonyms":[{"name":"sporadic hemiplegic migraine","type":"exact"}],"termid":"MONDO:0020757","xrefs":{"Monarch":{"xref_id":"0020757"}}}


id: GO:0070796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cleistothecium development, a process that leads to the formation of a cleistothecium. The cleistothecium is a closed sexual fruiting body that contains ascospores in linear asci, characteristic of some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporocarp development involved in sexual reproduction","termid":"GO:1902058"},{"relation_name":"regulates","term_name":"cleistothecium development","termid":"GO:0070791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cleistothecium development","termid":"GO:0070796"}


id: PBO:0070279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 20","termid":"PBO:0070279"}


id: PBO:0088658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyl-(protein) hydrolase","termid":"PBO:0088658"}


id: PBO:0028869
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_snoRNA_level","termid":"PBO:0028869"}


id: PBO:0089323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5-like heme/steroid binding domain superfamily","termid":"PBO:0089323"}


id: MONDO:0015134
data:
  {"annotated_genes":["SJAG_03684","SJAG_01732","SJAG_03089","SJAG_01798","SJAG_02208","SJAG_01759","SJAG_02330","SJAG_03889","SJAG_02453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014118"},{"annotations":[87805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[88066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957809"},{"annotations":[87925,87926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958017"},{"annotations":[88526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032899"},{"annotations":[88622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011405"},{"annotations":[87529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012559"},{"annotations":[88462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010294"}]},"cv_name":"mondo","definition":"A rare disorder characterized by recurrent infantile infections and absence of neutrophils in the peripheral blood.","definition_xrefs":["NCIT:C61242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutropenia","termid":"MONDO:0001475"},{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01732":null,"SJAG_01759":null,"SJAG_01798":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02453":null,"SJAG_03089":null,"SJAG_03684":null,"SJAG_03889":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"constitutional neutropenia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:19809","icd11.foundation:87096615","Orphanet:101987","UMLS:C3805116","ICD10CM:D70","MEDGEN:1785816"],"synonyms":[{"name":"Kostmann disease","type":"narrow"},{"name":"Kostmann neutropenia","type":"narrow"},{"name":"Kostmann syndrome","type":"narrow"},{"name":"congenital neutropenia","type":"exact"},{"name":"genetic infantile agranulocytosis","type":"exact"},{"name":"infantile genetic agranulocytosis","type":"exact"}],"termid":"MONDO:0015134","terms_by_termid":{"MONDO:0010294":null,"MONDO:0011405":null,"MONDO:0011997":null,"MONDO:0012559":null,"MONDO:0014118":null,"MONDO:0032899":null,"MONDO:0957809":null,"MONDO:0958017":null},"xrefs":{"Monarch":{"xref_id":"0015134"}}}


id: GO:0034079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of butanediol; the biologically relevant isomer is 2,3-butanediol, CH3CH(OH)CH(OH)CH3.","definition_xrefs":["MetaCyc:P125-PWY","GOC:mah","ISBN:0911910123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butanediol metabolic process","termid":"GO:0034077"},{"relation_name":"is_a","term_name":"glycol biosynthetic process","termid":"GO:0042845"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"butanediol biosynthetic process","synonyms":[{"name":"butanediol anabolism","type":"exact"},{"name":"butanediol biosynthesis","type":"exact"},{"name":"butanediol formation","type":"exact"},{"name":"butanediol synthesis","type":"exact"},{"name":"butylene glycol biosynthesis","type":"exact"},{"name":"butylene glycol biosynthetic process","type":"exact"}],"termid":"GO:0034079"}


id: PR:O94686
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl4302 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L43-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.02c","synonyms":[{"name":"L37B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl4302","type":"exact"}],"termid":"PR:O94686"}


id: PBO:0051736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INTS6 antisense RNA 1","termid":"PBO:0051736"}


id: GO:0004996
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with thyroid-stimulating hormone to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"thyroid-stimulating hormone receptor activity","secondary_identifiers":["Wikipedia:Thyrotropin_receptor"],"synonyms":[{"name":"TSH receptor activity","type":"exact"},{"name":"thyroid stimulating hormone receptor activity","type":"exact"},{"name":"thyrotropin receptor","type":"exact"}],"termid":"GO:0004996"}


id: PBO:0013002
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curator_name","termid":"PBO:0013002"}


id: MONDO:0004814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vascular skin disease (obsolete MONDO:0004814)","termid":"MONDO:0004814","xrefs":{"Monarch":{"xref_id":"0004814"}}}


id: PBO:0053854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1123","termid":"PBO:0053854"}


id: PBO:0045108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrophin","termid":"PBO:0045108"}


id: GO:0030844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intermediate filament depolymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intermediate filament depolymerization","termid":"GO:0030842"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of protein depolymerization","termid":"GO:1901881"},{"relation_name":"positively_regulates","term_name":"intermediate filament depolymerization","termid":"GO:0045106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150"],"is_obsolete":false,"name":"positive regulation of intermediate filament depolymerization","synonyms":[{"name":"activation of intermediate filament depolymerization","type":"narrow"},{"name":"positive regulation of intermediate filament polymerization and/or depolymerization","type":"broad"},{"name":"stimulation of intermediate filament depolymerization","type":"narrow"},{"name":"up regulation of intermediate filament depolymerization","type":"exact"},{"name":"up-regulation of intermediate filament depolymerization","type":"exact"},{"name":"upregulation of intermediate filament depolymerization","type":"exact"}],"termid":"GO:0030844"}


id: GO:0052728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-violaxanthin = all-trans-capsorubin.","definition_xrefs":["RHEA:21752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"capsorubin synthase activity","secondary_identifiers":["MetaCyc:RXN-7946"],"synonyms":[{"name":"CCS","type":"broad"},{"name":"capsanthin-capsorubin synthase activity","type":"broad"},{"name":"ketoxanthophyll synthase activity","type":"broad"},{"name":"violaxanthin-capsorubin isomerase (ketone-forming) activity","type":"exact"}],"termid":"GO:0052728"}


id: PBO:0070312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 1","termid":"PBO:0070312"}


id: PR:O14243
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sorting nexin-30 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin-4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.12","secondary_identifiers":["UniProtKB:O14243"],"synonyms":[{"name":"Spom972h-SNX30","type":"exact"},{"name":"autophagy-related protein 24 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14243"}


id: SO:0005836
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence that is involved in the control of a biological process.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_member_region","termid":"SO:0000831"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Regulatory_region"],"synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:other","type":"exact"},{"name":"regulatory region","type":"exact"}],"termid":"SO:0005836"}


id: PBO:0073489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shugoshin 1 pseudogene 2","termid":"PBO:0073489"}


id: GO:0010192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mucilage, a gelatinous substance secreted by plants.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"mucilage metabolic process","termid":"GO:0010191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucilage biosynthetic process","synonyms":[{"name":"mucilage anabolism","type":"exact"},{"name":"mucilage biosynthesis","type":"exact"},{"name":"mucilage formation","type":"exact"},{"name":"mucilage synthesis","type":"exact"}],"termid":"GO:0010192"}


id: PBO:0067434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 555, pseudogene","termid":"PBO:0067434"}


id: PBO:0017049
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ste20 Homologous Kinase","termid":"PBO:0017049"}


id: GO:1900713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of violaceol I biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"violaceol I biosynthetic process","termid":"GO:1900590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of violaceol I biosynthetic process","synonyms":[{"name":"regulation of violaceol I anabolism","type":"exact"},{"name":"regulation of violaceol I biosynthesis","type":"exact"},{"name":"regulation of violaceol I formation","type":"exact"},{"name":"regulation of violaceol I synthesis","type":"exact"}],"termid":"GO:1900713"}


id: MONDO:0010846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary multiple osteochondromas","termid":"MONDO:0005508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exostoses, multiple, type III","secondary_identifiers":["UMLS:C1838420","OMIM:600209","MESH:C563975","GARD:2206","MEDGEN:333090"],"synonyms":[{"name":"EXT3","type":"exact"},{"name":"exostoses, multiple, type 3","type":"related"},{"name":"exostoses, multiple, type III","type":"exact"}],"termid":"MONDO:0010846","xrefs":{"Monarch":{"xref_id":"0010846"}}}


id: MONDO:1012516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"goldenhar syndrome, non-human animal","termid":"MONDO:1011657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"goldenhar syndrome, domestic cat","secondary_identifiers":["OMIA:002136-9685"],"termid":"MONDO:1012516","xrefs":{"Monarch":{"xref_id":"1012516"}}}


id: FYPO:0007152
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to camphor. Cells stop growing (and may die) at a concentration of camphor that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to camphor","synonyms":[{"name":"hypersensitive to camphor","type":"exact"},{"name":"sensitive to camphor during mitotic cell cycle","type":"related"},{"name":"sensitive to camphor during vegetative growth","type":"exact"}],"termid":"FYPO:0007152"}


id: MONDO:0000147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic polyp","termid":"MONDO:0021075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyposis","secondary_identifiers":["MEDGEN:137722","NANDO:2100257","NCIT:C4089","UMLS:C0334108"],"synonyms":[{"name":"multiple polyps","type":"exact"},{"name":"polyposis","type":"exact"}],"termid":"MONDO:0000147","xrefs":{"Monarch":{"xref_id":"0000147"}}}


id: FYPO:0004120
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that is smaller than normal, has a septum with abnormal size, shape, or structure, and that undergoes two or more rounds of cell division, and then dies.","definition_xrefs":["PomBase:mah","PMID:15116432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, elongated cell","termid":"FYPO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0000005","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, small cell with abnormal septum morphology","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, small cell with abnormal septum formation","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, small cell with abnormal septum morphology","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, small cell with abnormal septum morphology","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, small cell with abnormal septum morphology","type":"exact"}],"termid":"FYPO:0004120"}


id: MONDO:0040675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, well circumscribed soft tissue neoplasm characterized by the presence of spindle shaped myofibroblasts and mast cells in a collagenous stroma.","definition_xrefs":["NCIT:C49012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblastic neoplasm","termid":"MONDO:0006209"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myofibroblastoma","secondary_identifiers":["UMLS:C0242404","ICDO:8825/0","MEDGEN:66894"],"synonyms":[{"name":"myofibroblastoma","type":"exact"}],"termid":"MONDO:0040675","xrefs":{"Monarch":{"xref_id":"0040675"}}}


id: PBO:0091521
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mcs4-Associated Kinase","termid":"PBO:0091521"}


id: PBO:0070962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 17","termid":"PBO:0070962"}


id: PBO:0083970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucokinase; catalyzes the phosphorylation of glucose at C6 in the first irreversible step of glucose metabolism; one of three glucose phosphorylating enzymes; expression regulated by non-fermentable carbon sources; GLK1 has a paralog, EMI2, that arose from the whole genome duplication","termid":"PBO:0083970"}


id: GO:1902022
data:
  {"annotated_genes":["SJAG_03400","SJAG_03256","SJAG_04637","SJAG_00543","SJAG_02029","SJAG_04725"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097639"},{"annotations":[99266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089707"},{"annotations":[109866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160256"},{"annotations":[104736,105767,112003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"}]},"cv_name":"biological_process","definition":"The directed movement of a L-lysine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:TermGenie","PMID:22822152","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"L-amino acid transport","termid":"GO:0015807"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00543":null,"SJAG_02029":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_04637":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"L-lysine transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902022","terms_by_termid":{"GO:0089707":null,"GO:0090517":null,"GO:0097639":null,"GO:0160256":null}}


id: MONDO:0000467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intermittent failure of atrial electrical impulse conduction to the ventricles.","definition_xrefs":["NCIT:C111119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrioventricular block","termid":"MONDO:0000465"},{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"second-degree atrioventricular block","secondary_identifiers":["UMLS:C0264906","DOID:0050822","ICD9:426.13","MEDGEN:75546","SCTID:195042002"],"synonyms":[{"name":"AV block second degree","type":"exact"},{"name":"atrioventricular block second degree","type":"exact"},{"name":"atrioventricular block, second degree","type":"exact"},{"name":"second degree AV block","type":"exact"},{"name":"second degree atrioventricular block","type":"exact"},{"name":"second-degree heart block","type":"exact"}],"termid":"MONDO:0000467","xrefs":{"Monarch":{"xref_id":"0000467"}}}


id: GO:0008987
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: iminoaspartate + dihydroxy-acetone-phosphate = quinolinate + 2 H2O + phosphate.","definition_xrefs":["MetaCyc:QUINOLINATE-SYNTHA-RXN","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016765","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"quinolinate synthetase A activity","secondary_identifiers":["RHEA:25888"],"termid":"GO:0008987"}


id: MONDO:0018551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Patent urachus is a type of congenital urachal anomaly characterized by a persistent communication between the bladder and the umbilicus, secondary to non occlusion of the urachal lumen, manifesting as clear drainage from the umbilicus.","definition_xrefs":["Orphanet:431341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital urachal anomaly","termid":"MONDO:0018565"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patent urachus","secondary_identifiers":["SCTID:398316009","GARD:21798","icd11.foundation:1391202028","UMLS:C0266357","HP:0010479","NCIT:C99005","MEDGEN:75610"],"synonyms":[{"name":"patent urachus","type":"exact"},{"name":"patent urachus (disease)","type":"exact"}],"termid":"MONDO:0018551","xrefs":{"Monarch":{"xref_id":"0018551"}}}


id: PBO:0043840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine palmitoyltransferase 2 pseudogene 1","termid":"PBO:0043840"}


id: MONDO:0002981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small round cell tumor with neural differentiation arising from the bone. It may be associated with pain.","definition_xrefs":["NCIT:C8776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone cancer","termid":"MONDO:0002129"},{"relation_name":"is_a","term_name":"peripheral primitive neuroectodermal tumor","termid":"MONDO:0018271"},{"relation_name":"is_a","term_name":"Ewing sarcoma/peripheral primitive neuroectodermal tumor of bone","termid":"MONDO:0021123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"peripheral primitive neuroectodermal tumor of bone","secondary_identifiers":["DOID:4388","MEDGEN:163179","UMLS:C0855009"],"synonyms":[{"name":"bone peripheral neuroepithelioma","type":"exact"},{"name":"bone tissue peripheral primitive neuroectodermal tumor","type":"exact"},{"name":"bone tissue peripheral primitive neuroectodermal tumour","type":"exact"},{"name":"osseous peripheral neuroepithelioma","type":"exact"},{"name":"peripheral neuroectodermal tumor of bone","type":"exact"},{"name":"peripheral neuroectodermal tumor of the bone","type":"exact"},{"name":"peripheral neuroectodermal tumour of bone","type":"exact"},{"name":"peripheral neuroectodermal tumour of the bone","type":"exact"},{"name":"peripheral neuroepithelioma of bone","type":"exact"},{"name":"peripheral neuroepithelioma of the bone","type":"exact"},{"name":"peripheral primitive neuroectodermal tumor of bone","type":"exact"},{"name":"peripheral primitive neuroectodermal tumor of bone tissue","type":"exact"},{"name":"peripheral primitive neuroectodermal tumour of bone tissue","type":"exact"}],"termid":"MONDO:0002981","xrefs":{"Monarch":{"xref_id":"0002981"}}}


id: RO:0002632
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A sub-relation of parasite-of in which the parasite lives on or in the integumental system of the host","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectoparasite_of","termid":"RO:0002632"}


id: PBO:0086925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pyruvate carboxylase isoform; cytoplasmic enzyme that converts pyruvate to oxaloacetate; differentially regulated than isoform Pyc1p; mutations in the human homolog are associated with lactic acidosis; PYC2 has a paralog, PYC1, that arose from the whole genome duplication","termid":"PBO:0086925"}


id: GO:0150200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transport across the blood-brain barrier.","definition_xrefs":["GOC:bc","PMID:29377008","PMID:30280653","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"part_of","term_name":"regulation of vascular permeability","termid":"GO:0043114"},{"relation_name":"regulates","term_name":"transport across blood-brain barrier","termid":"GO:0150104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of transport across blood-brain barrier","termid":"GO:0150200"}


id: GO:2000498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of induction of apoptosis in response to chemical stimulus.","definition_xrefs":["GOC:mtg_apoptosis","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of induction of apoptosis in response to chemical stimulus (obsolete GO:2000498)","synonyms":[{"name":"regulation of induction of apoptosis in response to chemical stimulus","type":"exact"},{"name":"regulation of induction of apoptosis in response to chemical substance","type":"exact"}],"termid":"GO:2000498"}


id: MONDO:0003495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell tumor that arises from the ovary and is not associated with a germ cell tumor.","definition_xrefs":["NCIT:C40092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian epithelial tumor","termid":"MONDO:0002229"},{"relation_name":"is_a","term_name":"squamous cell neoplasm","termid":"MONDO:0002532"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian squamous cell neoplasm","secondary_identifiers":["DOID:5532"],"synonyms":[{"name":"ovarian squamous cell neoplasm","type":"exact"},{"name":"ovarian squamous cell tumor","type":"exact"},{"name":"ovarian squamous cell tumour","type":"exact"},{"name":"ovary squamous cell neoplasm","type":"exact"}],"termid":"MONDO:0003495","xrefs":{"Monarch":{"xref_id":"0003495"}}}


id: PBO:0056053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LUC7 like 3 pre-mRNA splicing factor","termid":"PBO:0056053"}


id: PBO:0067523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 666, pseudogene","termid":"PBO:0067523"}


id: PBO:0068030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 335","termid":"PBO:0068030"}


id: GO:0005730
data:
  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id: PBO:0003591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Gsk31 (predicted)","termid":"PBO:0003591"}


id: GO:0052437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of calcium ion fluxes as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of defense-related symbiont calcium ion flux (obsolete GO:0052437)","synonyms":[{"name":"modulation by organism of defense-related symbiont Ca2+ flux","type":"exact"},{"name":"modulation by organism of defense-related symbiont calcium ion flux","type":"exact"}],"termid":"GO:0052437"}


id: MONDO:1012602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease that occurs in dogs in which there is a buildup of GM2 gangliosides in tissues due to the lack of the enzyme hexosaminidase. It is characterised by progressive neuromuscular dysfunction and impaired growth from an early age.","definition_xrefs":["OMIA:000403-9615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, dog","termid":"MONDO:1010840"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2 gangliosidosis, dog","synonyms":[{"name":"gangliosidosis, GM2, generic, dog","type":"related"}],"termid":"MONDO:1012602","xrefs":{"Monarch":{"xref_id":"1012602"}}}


id: MONDO:0100582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital myopathy in which the cause of the disease is pathogenic variation in the TOR1AIP1 gene. May include fatigable muscle weakness resulting from impaired transmission at the neuromuscular synapse.","definition_xrefs":["PMID:27342937","PMID:33405017","PMID:32873274","PMID:33215087","PMID:34164833","PMID:24856141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"},{"relation_name":"is_a","term_name":"TOR1AIP1-related nuclear envelopathy","termid":"MONDO:0100604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"TOR1AIP1-related myopathy","synonyms":[{"name":"TOR1AIP1-related limb-girdle muscular dystrophy","type":"narrow"},{"name":"autosomal recessive limb-girdle muscular dystrophy type 2Y","type":"narrow"},{"name":"muscular dystrophy autosomal recessive with rigid spine and distal joint contractures","type":"narrow"}],"termid":"MONDO:0100582","xrefs":{"Monarch":{"xref_id":"0100582"}}}


id: GO:1900790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pseurotin A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactam biosynthetic process","termid":"GO:0072339"},{"relation_name":"is_a","term_name":"pseurotin A metabolic process","termid":"GO:1900788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pseurotin A biosynthetic process","synonyms":[{"name":"Pseurotin anabolism","type":"related"},{"name":"Pseurotin biosynthesis","type":"related"},{"name":"Pseurotin biosynthetic process","type":"related"},{"name":"Pseurotin formation","type":"related"},{"name":"Pseurotin synthesis","type":"related"},{"name":"pseurotin A anabolism","type":"exact"},{"name":"pseurotin A biosynthesis","type":"exact"},{"name":"pseurotin A formation","type":"exact"},{"name":"pseurotin A synthesis","type":"exact"}],"termid":"GO:1900790"}


id: GO:0000487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor 5.8S ribosomal RNA (rRNA) molecule into a mature 5.8S rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 8.8S rRNA, the 2S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of 5.8S rRNA","termid":"GO:0000460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0010467","GO:0042254"],"is_obsolete":false,"name":"maturation of 5.8S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000487"}


id: PBO:0030604
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-coflocculating_cells","termid":"PBO:0030604"}


id: PBO:0026631
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_establishment_of_mitotic_sister_chromatid_cohesion","termid":"PBO:0026631"}


id: MONDO:1012297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hymen, imperforate, non-human animal","termid":"MONDO:1010279"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imperforate hymen, cattle","secondary_identifiers":["OMIA:001107-9913"],"termid":"MONDO:1012297","xrefs":{"Monarch":{"xref_id":"1012297"}}}


id: PBO:0047046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 110 member A","termid":"PBO:0047046"}


id: PR:O60126
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA topoisomerase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.12c","secondary_identifiers":["UniProtKB:O60126"],"synonyms":[{"name":"DNA topoisomerase III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-topB","type":"exact"}],"termid":"PR:O60126"}


id: MONDO:0002814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma involving a adrenal gland.","definition_xrefs":["MONDO:patterns/carcinoma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retroperitoneum carcinoma","termid":"MONDO:0001502"},{"relation_name":"is_a","term_name":"adrenal gland cancer","termid":"MONDO:0002817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adrenal carcinoma","secondary_identifiers":["SCTID:255035007","DOID:3950"],"synonyms":[{"name":"adrenal gland carcinoma","type":"exact"},{"name":"carcinoma of adrenal gland","type":"exact"},{"name":"carcinoma of the adrenal gland","type":"exact"}],"termid":"MONDO:0002814","xrefs":{"Monarch":{"xref_id":"0002814"}}}


id: MONDO:0971179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arterial tortuosity-bone fragility syndrome","secondary_identifiers":["OMIM:620908","UMLS:C5935641","MEDGEN:1855920"],"termid":"MONDO:0971179","xrefs":{"Monarch":{"xref_id":"0971179"}}}


id: GO:0042040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of a metal into a metallo-molybdopterin complex.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metal incorporation into metallo-molybdopterin complex","termid":"GO:0042040"}


id: MONDO:0016644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Logopenic progressive aphasia (lv-PPA) is a form of primary progressive aphasia (PPA), characterized by impaired single-word retrieval and naming and impaired repetition with spared single-word comprehension and object knowledge.","definition_xrefs":["Orphanet:250831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary progressive aphasia","termid":"MONDO:0019806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"logopenic progressive aphasia","secondary_identifiers":["DOID:0081389","UMLS:C4274665","SCTID:716380002","GARD:10791","MEDGEN:907332"],"synonyms":[{"name":"LPA","type":"exact"},{"name":"Logopenic primary progressive aphasia","type":"exact"},{"name":"Logopenic variant PPA","type":"exact"}],"termid":"MONDO:0016644","xrefs":{"Monarch":{"xref_id":"0016644"}}}


id: PBO:0063226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCDH10 divergent transcript","termid":"PBO:0063226"}


id: PBO:0079311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 5","termid":"PBO:0079311"}


id: PBO:0071395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 1","termid":"PBO:0071395"}


id: PBO:0003580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-5 sterol desaturase Erg32","termid":"PBO:0003580"}


id: PBO:0016540
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrameric","termid":"PBO:0016540"}


id: PBO:0042131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil glutamate rich protein 2","termid":"PBO:0042131"}


id: GO:0018825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: triethanolamine = diethanolamine + acetaldehyde.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete triethanolamine lyase activity (obsolete GO:0018825)","termid":"GO:0018825"}


id: MONDO:0100143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A COVID-19 infection that involves respiratory failure, septic shock, and/or multiple organ dysfunction.","gene_count":0,"genotype_count":0,"name":"obsolete critical COVID-19 infection (obsolete MONDO:0100143)","secondary_identifiers":["DOID:0081012"],"termid":"MONDO:0100143","xrefs":{"Monarch":{"xref_id":"0100143"}}}


id: PBO:0028520
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K14_acetylation","termid":"PBO:0028520"}


id: PBO:0058757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6881","termid":"PBO:0058757"}


id: GO:0015600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + polar amino acid(out) = ADP + phosphate + polar amino acid(in).","definition_xrefs":["TC:3.A.1.3.4","EC:3.6.3.21"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate/aspartate porter activity (obsolete GO:0015600)","synonyms":[{"name":"glutamate/aspartate porter activity","type":"exact"}],"termid":"GO:0015600"}


id: PATO:0000998
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viscosity quality inhering in a bearer by virtue of the bearer's having viscosity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viscosity","termid":"PATO:0000992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viscous","termid":"PATO:0000998"}


id: GO:0036074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Direct ossification in which bone formation occurs as result of the direct transformation of non-bone cells into bone cells without cell division.","definition_xrefs":["GO_REF:0000034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direct ossification","termid":"GO:0036072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metaplastic ossification","synonyms":[{"name":"metaplasia","type":"related"}],"termid":"GO:0036074"}


id: PBO:0046515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum lectin 1","termid":"PBO:0046515"}


id: MONDO:0001066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Late yaws is the tertiary, non-contagious stage of yaws, endemic tropical treponemal nonvenereal infection. Late yaws is characterized by destructive and deforming lesions of the skin, bones, and joints.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yaws","termid":"MONDO:0006019"},{"relation_name":"is_a","term_name":"cutaneous syphilis","termid":"MONDO:0006718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"late yaws","secondary_identifiers":["UMLS:C1517744","ICD10CM:A66.4","MEDGEN:276026","NCIT:C41354","ICD9:102.4","SCTID:186968004","ICD9:102.1","DOID:10567"],"synonyms":[{"name":"gummata and ulcers due to yaws","type":"exact"},{"name":"gummata of yaws","type":"exact"},{"name":"gummatous frambeside","type":"exact"},{"name":"multiple papillomata due to yaws and wet crab yaws","type":"exact"},{"name":"nodular late yaws","type":"exact"},{"name":"ulcers of yaws","type":"exact"},{"name":"yaws gummata and ulcers","type":"exact"}],"termid":"MONDO:0001066","xrefs":{"Monarch":{"xref_id":"0001066"}}}


id: MONDO:0019563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"CREST syndrome is a subtype of limited cutaneous systemic sclerosis (lcSSc) whose name is an acronym for the cardinal clinical features of the syndrome: calcinosis, Raynaud's phenomenon, esophageal dysmotility, sclerodactyly and telangiectasia.","definition_xrefs":["Orphanet:90290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"limited cutaneous systemic sclerosis","termid":"MONDO:0016358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"CREST syndrome","secondary_identifiers":["MedDRA:10011380","NCIT:C70646","SCTID:31848007","MESH:D017675","MEDGEN:60083","NANDO:1201011","DOID:0060218","UMLS:C0206138"],"synonyms":[{"name":"CRST syndrome","type":"narrow"},{"name":"CRST syndromes","type":"narrow"},{"name":"calcinosis - Raynaud phenomenon - esophageal involvement - sclerodactyly - telangiectasia","type":"related"},{"name":"calcinosis Raynaud phenomenon sclerodactyly telangiectasia","type":"related"},{"name":"calcinosis, Raynaud's phenomenon, esophageal dismobility, sclerodactyly, telangiectasia syndrome","type":"related"},{"name":"calcinosis-Raynaud phenomenon-esophageal involvement-sclerodactyly-telangiectasia syndrome","type":"exact"},{"name":"calcinosis-Raynaud phenomenon-sclerodactyly-telangiectasia","type":"related"},{"name":"lcSSc","type":"broad"},{"name":"limited cutaneous Systemic Scleroderma","type":"exact"},{"name":"limited cutaneous Systemic sclerosis","type":"exact"},{"name":"phenomenon-sclerodactyly-telangiectasia, calcinosis-Raynaud","type":"related"},{"name":"syndrome, CREST","type":"related"}],"termid":"MONDO:0019563","xrefs":{"Monarch":{"xref_id":"0019563"}}}


id: FYPO:0003148
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity","termid":"FYPO:0003147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"increased UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity","termid":"FYPO:0003148"}


id: GO:0019658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glucose to lactate and acetate, yielding energy in the form of ATP.","definition_xrefs":["MetaCyc:P124-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate metabolic process","termid":"GO:0006083"},{"relation_name":"is_a","term_name":"glucose catabolic process to lactate","termid":"GO:0019659"},{"relation_name":"is_a","term_name":"non-glycolytic fermentation","termid":"GO:0019662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"glucose fermentation to lactate and acetate","synonyms":[{"name":"bifidum pathway","type":"exact"},{"name":"glucose catabolic process to lactate and acetate","type":"broad"}],"termid":"GO:0019658"}


id: PBO:0051707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase J","termid":"PBO:0051707"}


id: GO:0016576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by removal of phosphate groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone dephosphorylation (obsolete GO:0016576)","termid":"GO:0016576"}


id: PATO:0002508
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer being hidden from view.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concealed","termid":"PATO:0002508"}


id: PR:O60160
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase omh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.12c","synonyms":[{"name":"Spom972h-omh1","type":"exact"}],"termid":"PR:O60160"}


id: PBO:0056062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper protein 2","termid":"PBO:0056062"}


id: PBO:0086006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SPS22 has a paralog, SPS2, that arose from the whole genome duplication; redundant with Sps2p for the organization of the beta-glucan layer of the spore wall","termid":"PBO:0086006"}


id: PBO:0042153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 15","termid":"PBO:0042153"}


id: GO:0018833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,1,1-trichloro-2,2-bis(4-chlorophenyl)ethane = 1,1-dichloro-2,2-bis(4-chlorophenyl)ethylene + chloride + H+.","definition_xrefs":["EC:4.5.1.1","RHEA:19217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"DDT-dehydrochlorinase activity","secondary_identifiers":["KEGG_REACTION:R04522","MetaCyc:DDT-DEHYDROCHLORINASE-RXN","UM-BBD_reactionID:r0439"],"synonyms":[{"name":"1,1,1-trichloro-2,2-bis(4-chlorophenyl)ethane chloride-lyase [1,1-dichloro-2,2-bis(4-chlorophenyl)ethylene-forming]","type":"related"},{"name":"1,1,1-trichloro-2,2-bis(4-chlorophenyl)ethane chloride-lyase activity","type":"related"},{"name":"DDT dehydrochlorinase activity","type":"exact"},{"name":"DDT-as","type":"related"},{"name":"DDT-ase activity","type":"related"},{"name":"DDTase activity","type":"related"}],"termid":"GO:0018833"}


id: GO:1903084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a condensed nuclear chromosome.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:12707312","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to nucleus","termid":"GO:0034504"},{"relation_name":"is_a","term_name":"protein localization to condensed chromosome","termid":"GO:1903083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to condensed nuclear chromosome","synonyms":[{"name":"protein localisation in condensed nuclear chromosome","type":"exact"},{"name":"protein localisation to condensed nuclear chromosome","type":"exact"},{"name":"protein localization in condensed nuclear chromosome","type":"exact"}],"termid":"GO:1903084"}


id: SO:0000670
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence within the micronuclear DNA of ciliates at which chromosome breakage and telomere addition occurs during nuclear differentiation.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_rearrangement_feature","termid":"SO:0000669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome_breakage_sequence","synonyms":[{"name":"chromosome breakage sequence","type":"exact"}],"termid":"SO:0000670"}


id: PBO:0069713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 993, pseudogene","termid":"PBO:0069713"}


id: PBO:0087572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TFIIH complex; facilities dissociation of the Ssl2p helices from TFIIH; expression levels regulated by Arg5,6p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus","termid":"PBO:0087572"}


id: FYPO:0008301
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed during prophase of the first division of the meiotic cell cycle in which a protein that is normally localized to discrete regions in the nucleus, visible as foci or dots by microscopy, is abnormally localized such that fewer dots are observed than in normal (wild type) cells.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal punctate nuclear protein localization during meiotic prophase I","termid":"FYPO:0008300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased punctate nuclear protein localization during meiotic prophase I","termid":"FYPO:0008301"}


id: PBO:0080817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exoribonuclease 2","termid":"PBO:0080817"}


id: MONDO:1040006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neurodevelopmental disorder in which the cause of the disease is a variation in the CTR9 gene. This disorder is characterised by varying degrees of intellectual disability, neurodevelopmental delay, hypotonia, fatigability, behavioral abnormalities including autism spectrum disorder, anxiety and aggressive behavior, cardiac anomalies, and mild facial dysmorphism.","definition_xrefs":["PMID:35717577","PMID:35468861","PMID:35499524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"CTR9-related neurodevelopmental disorder","termid":"MONDO:1040006","xrefs":{"Monarch":{"xref_id":"1040006"}}}


id: PBO:0076716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 23","termid":"PBO:0076716"}


id: PBO:0045421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent-paired related homeobox pseudogene 1","termid":"PBO:0045421"}


id: MONDO:0004414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spectrum of endometrial abnormalities that occur in women who use tamoxifen to treat or prevent the development of breast cancer. These abnormalities include endometrial polyps, endometrial hyperplasia, and endometrial carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrial disorder","termid":"MONDO:0000931"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tamoxifen-related endometrial lesion","secondary_identifiers":["NCIT:C40159","DOID:7962","UMLS:C1515212","MEDGEN:271571"],"synonyms":[{"name":"tamoxifen-related endometrial disorder","type":"exact"}],"termid":"MONDO:0004414","xrefs":{"Monarch":{"xref_id":"0004414"}}}


id: PBO:0056297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 1 light chain 3 beta","termid":"PBO:0056297"}


id: PBO:0043952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin beta B3","termid":"PBO:0043952"}


id: PBO:0038337
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_autoimmune_trigger","termid":"PBO:0038337"}


id: GO:0034966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the conversion of a primary box H/ACA type small nucleolar RNA (snoRNA) transcript that resides within, and is processed from, the intron of a pre-mRNA into a mature box H/ACA snoRNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intronic snoRNA processing","termid":"GO:0031070"},{"relation_name":"is_a","term_name":"box H/ACA sno(s)RNA processing","termid":"GO:0034964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016074"],"is_obsolete":false,"name":"intronic box H/ACA snoRNA processing","termid":"GO:0034966"}


id: PBO:0034581
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transport_along_microtubule","termid":"PBO:0034581"}


id: GO:0160142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(746) in 23S rRNA = pseudouridine(746) in 23S rRNA.","definition_xrefs":["EC:5.4.99.29","RHEA:42548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"23S rRNA pseudouridine(746) synthase activity","termid":"GO:0160142"}


id: PBO:0056850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microsomal glutathione S-transferase 2","termid":"PBO:0056850"}


id: MONDO:0001952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the parietal lobe","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral hemisphere cancer","termid":"MONDO:0002731"},{"relation_name":"is_a","term_name":"neoplasm of parietal lobe","termid":"MONDO:0021373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"parietal lobe cancer","secondary_identifiers":["ICD10CM:C71.3","DOID:14384","SCTID:363469001","ICD9:191.3","UMLS:C0153637","MEDGEN:509348"],"synonyms":[{"name":"cancer of parietal lobe","type":"exact"},{"name":"malignant neoplasm of parietal lobe","type":"exact"},{"name":"malignant parietal lobe neoplasm","type":"exact"},{"name":"parietal lobe cancer","type":"exact"},{"name":"parietal lobe neoplasm","type":"related"},{"name":"tumour of parietal lobe","type":"related"}],"termid":"MONDO:0001952","xrefs":{"Monarch":{"xref_id":"0001952"}}}


id: MONDO:0002601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-seminomatous germ cell tumor characterized by the presence of various tissues which correspond to the different germinal layers (endoderm, mesoderm, and ectoderm). It occurs in the testis, ovary, and extragonadal sites including central nervous system, mediastinum, lung, and stomach. According to the level of differentiation of the tissues which comprise the tumor, teratomas are classified as mature or immature. Mature teratomas are composed of well differentiated, adult-type tissues. Immature teratomas are composed of immature, fetal-type tissues. Testicular teratomas in children follow a benign clinical course. Mature ovarian teratomas without a fetal-type component have an excellent outcome. The prognosis of immature ovarian teratomas is related to the grade and stage of the tumor.","definition_xrefs":["NCIT:C3403"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete germ cell and embryonal cancer (obsolete MONDO:0002510)","termid":"MONDO:0002510"},{"relation_name":"is_a","term_name":"nongerminomatous germ cell tumor","termid":"MONDO:0021656"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teratoma","secondary_identifiers":["ONCOTREE:TT","SCTID:36591000119102","ICDO:9080/1","MEDGEN:21097","MESH:D013724","DOID:3307","UMLS:C0039538"],"synonyms":[{"name":"teratoma","type":"exact"}],"termid":"MONDO:0002601","xrefs":{"Monarch":{"xref_id":"0002601"}}}


id: GO:0048509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meristem development, the biological process whose specific outcome is the progression of the meristem over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"meristem development","termid":"GO:0048507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of meristem development","termid":"GO:0048509"}


id: MONDO:0019103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign exophthalmos syndrome is characterized by slowly progressive unilateral exophthalmos and ipsilateral mucosal turbinate hypertrophy, without intraorbital or intranasal lesions.","definition_xrefs":["Orphanet:71269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign exophthalmos syndrome","secondary_identifiers":["SCTID:719519007","UMLS:C4304668","icd11.foundation:1241377630","MEDGEN:930337"],"synonyms":[{"name":"bes","type":"exact"}],"termid":"MONDO:0019103","xrefs":{"Monarch":{"xref_id":"0019103"}}}


id: PATO:0001417
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration quality of a process inhering in a bearer by virtue of the bearer's duration which has irregular start and/or end times.","definition_xrefs":["PATOC:melissa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"irregular duration","termid":"PATO:0001417"}


id: MONDO:0015947
data:
  {"annotated_genes":["SJAG_01307","SJAG_02085","SJAG_02842","SJAG_02326"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87102,87101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014010"},{"annotations":[87687,87686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100221"}]},"cv_name":"mondo","definition":"Mendelian disorders of cornification affecting all or most of integument characterized by hyperkeratosis and/or scaling, caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary","PMID:20643494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ichthyosis","termid":"MONDO:0019269"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_02085":null,"SJAG_02326":null,"SJAG_02842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"inherited ichthyosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:757.1","MedDRA:10021202","NANDO:2100283","Orphanet:183435","UMLS:C0856562","GARD:20261","NANDO:1200609","ICD10CM:Q80","SCTID:13059002","MEDGEN:797407"],"synonyms":[{"name":"congenital ichthyosis","type":"related"},{"name":"congenital ichthyosis of skin","type":"exact"},{"name":"fish scale disease","type":"related"},{"name":"fish skin","type":"related"},{"name":"genetic ichthyosis","type":"exact"},{"name":"hereditary ichthyosis (disease)","type":"exact"},{"name":"ichthyosis congenita","type":"related"},{"name":"inherited genetic ichthyosis","type":"exact"}],"termid":"MONDO:0015947","terms_by_termid":{"MONDO:0014010":null,"MONDO:0100221":null},"xrefs":{"Monarch":{"xref_id":"0015947"}}}


id: GO:0061829
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Actin-based structures involved in establishing the blood-testis barrier of the Sertoli cell.","definition_xrefs":["PMID:22510523","PMID:20403871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tubulobulbar complex","termid":"GO:0036284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"basal tubulobulbar complex","synonyms":[{"name":"basal TBC","type":"exact"}],"termid":"GO:0061829"}


id: PATO:0000443
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sleep pattern quality inhering in a bearer by virtue of the bearer's disrupted sleep during normal sleeping period; often accompanied by cataplexy, sleep paralysis.","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000443 narcolepsy (obsolete PATO:0000443)","termid":"PATO:0000443"}


id: PBO:0056773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 23","termid":"PBO:0056773"}


id: PBO:0081159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFPM2 antisense RNA 1","termid":"PBO:0081159"}


id: PBO:0065996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like proto-oncogene A","termid":"PBO:0065996"}


id: PBO:0084448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannoprotein that exhibits a tight association with the cell wall; required for cell wall stability in the absence of GPI-anchored mannoproteins; has a high serine-threonine content; expression is induced in cell wall mutants; SRL1 has a paralog, SVS1, that arose from the whole genome duplication","termid":"PBO:0084448"}


id: PBO:0072998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCN1A and SCN9A antisense RNA 1","termid":"PBO:0072998"}


id: PBO:0057058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR142 host genes","termid":"PBO:0057058"}


id: GO:0102520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: O-phospho-L-threonine + H2O = L-threonine + hydrogenphosphate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete L-threonine O-3-phosphate phosphatase activity (obsolete GO:0102520)","termid":"GO:0102520"}


id: PR:Q9HGN2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein SET that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein C36B7.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36B7.08c","secondary_identifiers":["UniProtKB:Q9HGN2"],"synonyms":[{"name":"Spom972h-SET","type":"exact"}],"termid":"PR:Q9HGN2"}


id: GO:0002058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to uracil.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase binding","termid":"GO:0002061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"uracil binding","termid":"GO:0002058"}


id: FYPO:0005598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the centromere of a chromosome is increased during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to centromere","termid":"FYPO:0006239"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during meiotic cell cycle","termid":"FYPO:0006529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to centromere during meiotic cell cycle","synonyms":[{"name":"increased protein localisation to centromere during meiotic cell cycle","type":"exact"},{"name":"increased protein localisation to chromosome, centromeric region during meiotic cell cycle","type":"exact"},{"name":"increased protein localization to chromosome, centric region during meiotic cell cycle","type":"exact"},{"name":"increased protein localization to chromosome, centromeric region during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005598"}


id: PBO:0000670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Der1-like (degradation in the ER) family (predicted)","termid":"PBO:0000670"}


id: MONDO:0013896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the TCTN3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 18","secondary_identifiers":["GARD:15843","OMIM:614815","DOID:0110987","UMLS:C3553758","MEDGEN:766672"],"synonyms":[{"name":"JBTS18","type":"exact"},{"name":"Joubert syndrome 18","type":"exact"},{"name":"Joubert syndrome caused by mutation in TCTN3","type":"exact"},{"name":"Joubert syndrome type 18","type":"exact"},{"name":"TCTN3 Joubert syndrome","type":"exact"}],"termid":"MONDO:0013896","xrefs":{"Monarch":{"xref_id":"0013896"}}}


id: MONDO:0850103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"non-specific autoimmune supratentorial encephalitis without characteristic antibodies","secondary_identifiers":["MEDGEN:1843156","GARD:22498","UMLS:C5680409","Orphanet:624178"],"termid":"MONDO:0850103","xrefs":{"Monarch":{"xref_id":"0850103"}}}


id: PBO:0013081
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement E. coli hisG","termid":"PBO:0013081"}


id: MONDO:0001957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inflammatory and toxic neuropathy (obsolete MONDO:0002336)","termid":"MONDO:0002336"},{"relation_name":"is_a","term_name":"polyneuropathy","termid":"MONDO:0001824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"critical illness polyneuropathy","secondary_identifiers":["MEDGEN:140748","MESH:D011115","SCTID:230594005","UMLS:C0393851","ICD10CM:G62.81","ICD9:357.82","DOID:14402"],"termid":"MONDO:0001957","xrefs":{"Monarch":{"xref_id":"0001957"}}}


id: FYECO:0000408
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which canavanin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ canavanin","synonyms":[{"name":"canavanin added","type":"exact"}],"termid":"FYECO:0000408"}


id: MONDO:0005141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the genus pseudomonas.","definition_xrefs":["MESH:D011552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudomonas infection","secondary_identifiers":["UMLS:C0033817","SCTID:63398001","EFO:0001076","MEDGEN:10993","ICD9:041.7"],"synonyms":[{"name":"Pseudomonas caused disease or disorder","type":"exact"},{"name":"Pseudomonas disease or disorder","type":"exact"},{"name":"Pseudomonas infectious disease","type":"exact"}],"termid":"MONDO:0005141","xrefs":{"Monarch":{"xref_id":"0005141"}}}


id: PBO:0028424
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_actomyosin_contractile_ring,_with_protein_mislocalized_to_cytoplasm","termid":"PBO:0028424"}


id: PBO:0086624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; YCR090C is not an essential gene","termid":"PBO:0086624"}


id: GO:0021557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the oculomotor nerve over time, from its formation to the mature structure. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle.","definition_xrefs":["GOC:dgh","GOC:cls","ISBN:0838580343","GO_REF:0000021","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"},{"relation_name":"part_of","term_name":"preganglionic parasympathetic fiber development","termid":"GO:0021783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oculomotor nerve development","synonyms":[{"name":"CN III development","type":"related"},{"name":"cranial nerve 3 development","type":"exact"},{"name":"cranial nerve III development","type":"exact"}],"termid":"GO:0021557"}


id: GO:0052879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (8R,9Z,12Z)-8-hydroperoxyoctadeca-9,12-dienoate = (7S,8S,9Z,12Z)-7,8-dihydroxyoctadeca-9,12-dienoate.","definition_xrefs":["RHEA:25399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular hydroxytransferase activity","termid":"GO:0050486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"9,12-octadecadienoate 8-hydroperoxide 8S-isomerase activity","secondary_identifiers":["EC:5.4.4.6","KEGG_REACTION:R07062","MetaCyc:RXN-12758"],"synonyms":[{"name":"(8R,9Z,12Z)-8-hydroperoxy-9,12-octadecadienoate mutase ((7S,8S,9Z,12Z)-5,8-dihydroxy-9,12-octadecadienoate-forming) activity","type":"related"},{"name":"8-hydroperoxide isomerase activity","type":"broad"},{"name":"linoleate diol synthase activity","type":"related"}],"termid":"GO:0052879"}


id: GO:0032141
data:
  {"annotated_genes":["SJAG_00634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100094],"is_not":false,"summary":null,"term":"GO:0032141"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a single cytosine insertion or a deletion that results in an unpaired cytosine.","definition_xrefs":["GOC:mah","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single base insertion or deletion binding","termid":"GO:0032138"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"single cytosine insertion binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032141","terms_by_termid":{"GO:0032141":null}}


id: PBO:0057518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 636","termid":"PBO:0057518"}


id: PBO:0050861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inducible T cell costimulator ligand","termid":"PBO:0050861"}


id: PBO:0085329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol synthase; required for biosynthesis of phosphatidylinositol, which is a precursor for polyphosphoinositides, sphingolipids, and glycolipid anchors for some of the plasma membrane proteins","termid":"PBO:0085329"}


id: PBO:0052366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 14","termid":"PBO:0052366"}


id: PBO:0064817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 10","termid":"PBO:0064817"}


id: GO:0090491
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalyzes the reaction: N-Hydroxy-L-tryptophan + Oxygen + NADPH + H+ = N,N-Dihydroxy-L-tryptophan + NADP+ + H2O.","definition_xrefs":["KEGG_REACTION:R09584"],"gene_count":0,"genotype_count":0,"name":"obsolete N-hydroxy-L-tryptophan,NADPH:oxygen oxidoreductase (N-hydroxylating) (obsolete GO:0090491)","termid":"GO:0090491"}


id: MONDO:1012179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myoclonus epilepsy of Lafora, non-human animal","termid":"MONDO:1011627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonus epilepsy of Lafora, domestic cat","secondary_identifiers":["OMIA:000690-9685"],"termid":"MONDO:1012179","xrefs":{"Monarch":{"xref_id":"1012179"}}}


id: MONDO:1011010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Horner syndrome that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Horner syndrome, non-human animal","termid":"MONDO:1010240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Horner syndrome, domestic cat","secondary_identifiers":["OMIA:001197-9685"],"termid":"MONDO:1011010","xrefs":{"Monarch":{"xref_id":"1011010"}}}


id: PBO:0000282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sad1 interacting factor 3 (predicted)","termid":"PBO:0000282"}


id: GO:0070454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of heme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heme biosynthetic process","termid":"GO:0070453"},{"relation_name":"is_a","term_name":"negative regulation of tetrapyrrole biosynthetic process","termid":"GO:1901464"},{"relation_name":"negatively_regulates","term_name":"heme biosynthetic process","termid":"GO:0006783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0033013"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"negative regulation of heme biosynthetic process","synonyms":[{"name":"down regulation of heme biosynthetic process","type":"exact"},{"name":"down-regulation of heme biosynthetic process","type":"exact"},{"name":"downregulation of heme biosynthetic process","type":"exact"},{"name":"inhibition of heme biosynthetic process","type":"narrow"},{"name":"negative regulation of haem biosynthetic process","type":"exact"},{"name":"negative regulation of heme anabolism","type":"exact"},{"name":"negative regulation of heme biosynthesis","type":"exact"},{"name":"negative regulation of heme formation","type":"exact"},{"name":"negative regulation of heme synthesis","type":"exact"}],"termid":"GO:0070454"}


id: PR:O94723
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl20 gene.","definition_xrefs":["UniProtKB:O94723","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L20, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.11","synonyms":[{"name":"Spom972h-mrpl20","type":"exact"}],"termid":"PR:O94723"}


id: GO:0044829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism activates or increases the frequency, rate or extent of viral genome replication.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation by host of viral process","termid":"GO:0044794"},{"relation_name":"is_a","term_name":"modulation by host of viral genome replication","termid":"GO:0044827"},{"relation_name":"positively_regulates","term_name":"viral genome replication","termid":"GO:0019079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation by host of viral genome replication","termid":"GO:0044829"}


id: MONDO:0007061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acylase, cobalt-activated (obsolete MONDO:0007061)","secondary_identifiers":["OMIM:102590"],"synonyms":[{"name":"acylase, cobalt-activated","type":"exact"}],"termid":"MONDO:0007061","xrefs":{"Monarch":{"xref_id":"0007061"}}}


id: PBO:0091064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-3-methyladenine glycosylase Mag2","termid":"PBO:0091064"}


id: GO:1902180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of verruculogen.","definition_xrefs":["GOC:di","PMID:23649274","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete verruculogen catabolic process (obsolete GO:1902180)","synonyms":[{"name":"verruculogen breakdown","type":"exact"},{"name":"verruculogen catabolism","type":"exact"},{"name":"verruculogen degradation","type":"exact"}],"termid":"GO:1902180"}


id: PBO:0071908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 47","termid":"PBO:0071908"}


id: MONDO:0013984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the OTOGL gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 84B","secondary_identifiers":["UMLS:C3554159","DOID:0110530","MEDGEN:767073","GARD:22647","OMIM:614944"],"synonyms":[{"name":"DFNB84B","type":"narrow"},{"name":"OTOGL autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 84B","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 84B","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in OTOGL","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 84B","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 84B","type":"exact"},{"name":"deafness, autosomal recessive 84B","type":"narrow"},{"name":"deafness, autosomal recessive 84b","type":"narrow"},{"name":"deafness, autosomal recessive type 84B","type":"narrow"}],"termid":"MONDO:0013984","xrefs":{"Monarch":{"xref_id":"0013984"}}}


id: PBO:0080932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAZ pseudogene 10","termid":"PBO:0080932"}


id: PBO:0074208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 41 member 1","termid":"PBO:0074208"}


id: PBO:0058219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4509-3","termid":"PBO:0058219"}


id: PBO:0078575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif-containing 51J, pseudogene","termid":"PBO:0078575"}


id: GO:0061801
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha3B, beta3 and gamma2 polypeptide chains.","definition_xrefs":["GOC:dph","PMID:15979864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"laminin-5B complex","synonyms":[{"name":"laminin 3B32 complex","type":"exact"}],"termid":"GO:0061801"}


id: FYPO:0000351
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the fungal-type cell wall is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall during vegetative growth","termid":"FYPO:0000027"},{"relation_name":"is_a","term_name":"abnormal cell wall morphology","termid":"FYPO:0002947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002946","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell wall morphology during vegetative growth","synonyms":[{"name":"abnormal cell wall morphology during mitotic cell cycle","type":"related"},{"name":"cell wall morphology: abnormal during vegetative growth","type":"related"}],"termid":"FYPO:0000351"}


id: GO:0061099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of protein tyrosine kinase activity.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"},{"relation_name":"is_a","term_name":"negative regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050732"},{"relation_name":"is_a","term_name":"regulation of protein tyrosine kinase activity","termid":"GO:0061097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein tyrosine kinase activity","termid":"GO:0061099"}


id: GO:0045443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of juvenile hormones, the three sesquiterpenoid derivatives that function to maintain the larval state of insects at molting and that may be required for other processes, e.g. oogenesis.","definition_xrefs":["GOC:go_curators","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid transport","termid":"GO:0046865"},{"relation_name":"is_a","term_name":"endocrine hormone secretion","termid":"GO:0060986"},{"relation_name":"is_a","term_name":"lipid export from cell","termid":"GO:0140353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0023052"],"is_obsolete":false,"name":"juvenile hormone secretion","termid":"GO:0045443"}


id: PBO:0068387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 187","termid":"PBO:0068387"}


id: PBO:0052484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch domain containing 9","termid":"PBO:0052484"}


id: FYPO:0004823
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the number of ribosomal DNA (rDNA) repeats present in the rDNA arrays on chromosome III is abnormal (significantly greater or less than the range in wild type cells).","definition_xrefs":["PomBase:mah","PMID:25417108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal rDNA copy number","synonyms":[{"name":"abnormal ribosomal DNA copy number","type":"exact"}],"termid":"FYPO:0004823"}


id: PR:Q9UUG5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin regulatory light chain MRLC3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01613","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin regulatory light chain 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC926.03","secondary_identifiers":["UniProtKB:Q9UUG5"],"synonyms":[{"name":"Spom972h-MYL12A","type":"exact"}],"termid":"PR:Q9UUG5"}


id: GO:1990273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sequence of enzymatic reactions by which a 2,2,7-trimethylguanosine cap structure is added to the 5' end of an snRNA. The snRNA capping process includes the formation of 7-methyl-G caps found on all RNA polymerase II transcripts, followed by hypermethylation at the 2' position of the guanosine residue to convert a mono-methylated cap to a 2,2,7-trimethylguanosine cap structure. Note that the pol III transcribed U6 snRNA is also TMG capped.","definition_xrefs":["PMID:15590684","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA processing","termid":"GO:0016180"},{"relation_name":"is_a","term_name":"RNA capping","termid":"GO:0036260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016073"],"is_obsolete":false,"name":"snRNA 2,2,7-trimethylguanosine (TMG) capping","synonyms":[{"name":"snRNA 2,2,7-trimethylguanosine (TMG) cap formation","type":"exact"},{"name":"snRNA 5'-end processing","type":"broad"},{"name":"snRNA capping","type":"exact"}],"termid":"GO:1990273"}


id: GO:0080016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (-)-E-beta-caryophyllene + diphosphate.","definition_xrefs":["PMID:12566586","PMID:9442047","MetaCyc:RXN-8414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0009975","GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"(-)-E-beta-caryophyllene synthase activity","secondary_identifiers":["RHEA:28294","EC:4.2.3.57"],"termid":"GO:0080016"}


id: GO:0010242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H2O = O2 + 4 H+ + 4 e-. The evolution of oxygen from oxidizing water is carried out by the oxygen evolving complex in photosystem II of plants. P680+, the photochemically oxidized reaction-center chlorophyll of PSII, is a strong biological oxidant. The reduction potential of P680+ is more positive than that of water, and thus it can oxidize water to give O2 and H+ ions. The oxygen escapes as a gas while the H+ ions remain in solution inside the thylakoid vesicle.","definition_xrefs":["GOC:syr","PMID:17091926","PMID:7948862","GOC:kd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxygen evolving activity","secondary_identifiers":["EC:1.10.3.9","MetaCyc:PSII-RXN","RHEA:36359"],"synonyms":[{"name":"photosynthetic water oxidation","type":"exact"}],"termid":"GO:0010242"}


id: MONDO:0007454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus in which the cause of the disease is a mutation in the INS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 2","secondary_identifiers":["UMLS:C1852092","MEDGEN:377588","MESH:C565100","OMIM:125852","DOID:0110741"],"synonyms":[{"name":"IDDM2","type":"exact"},{"name":"INS type 1 diabetes mellitus","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 2","type":"related"},{"name":"diabetes mellitus, insulin-dependent, type 2","type":"exact"},{"name":"insulin-dependent diabetes mellitus 2","type":"exact"},{"name":"type 1 diabetes mellitus caused by mutation in INS","type":"exact"}],"termid":"MONDO:0007454","xrefs":{"Monarch":{"xref_id":"0007454"}}}


id: GO:0003918
data:
  {"annotated_genes":["SJAG_05295","SJAG_03567"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70082,73508],"is_not":false,"summary":null,"term":"GO:0003918"}]},"cv_name":"molecular_function","definition":"Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined, driven by ATP hydrolysis. The enzyme changes the linking number in multiples of 2.","definition_xrefs":["PMID:8811192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA topoisomerase activity","termid":"GO:0003916"},{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03567":null,"SJAG_05295":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["Wikipedia:Type_II_topoisomerase","GO:0061505","EC:5.6.2.2","MetaCyc:5.99.1.3-RXN"],"synonyms":[{"name":"DNA topoisomerase (ATP-hydrolysing)","type":"related"},{"name":"DNA topoisomerase II","type":"narrow"},{"name":"DNA topoisomerase II activity","type":"narrow"},{"name":"DNA topoisomerase IV activity","type":"narrow"},{"name":"DNA topoisomerase type II activity","type":"exact"},{"name":"deoxyribonucleate topoisomerase","type":"broad"},{"name":"deoxyribonucleic topoisomerase activity","type":"broad"},{"name":"topoisomerase","type":"broad"},{"name":"topoisomerase II","type":"narrow"},{"name":"type II DNA topoisomerase activity","type":"related"}],"termid":"GO:0003918","terms_by_termid":{"GO:0003918":null}}


id: PBO:0074255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier organic anion transporter family member 1C1","termid":"PBO:0074255"}


id: MONDO:0019946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ligneous conjunctivitis (obsolete MONDO:0019946)","termid":"MONDO:0019946","xrefs":{"Monarch":{"xref_id":"0019946"}}}


id: MONDO:0007013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inability to achieve and maintain an erection (erectile dysfunction) due to defects in the arterial blood flow to the penis, defect in venous occlusive function allowing blood drainage (leakage) from the erectile tissue (corpus cavernosum penis), or both.","definition_xrefs":["MESH:D018783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erectile dysfunction","termid":"MONDO:0005362"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasculogenic impotence","secondary_identifiers":["DOID:4762","MEDGEN:69309","UMLS:C0243000"],"termid":"MONDO:0007013","xrefs":{"Monarch":{"xref_id":"0007013"}}}


id: MONDO:0000451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multiple sclerosis that is characterized by steady worsening of neurologic functioning, without any distinct relapses or periods of remission. The rate of progression may vary over time, with occasional plateaus or temporary improvements, but the progression is continuous.","definition_xrefs":["DOID:0050784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic progressive multiple sclerosis","termid":"MONDO:0005284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005559"],"is_obsolete":false,"name":"primary progressive multiple sclerosis","secondary_identifiers":["NANDO:2201320","icd11.foundation:1020720762","UMLS:C0751964","EFO:0008520","MEDGEN:155968","SCTID:428700003","NANDO:1200025"],"synonyms":[{"name":"PPMS","type":"exact"},{"name":"primary-progressive MS","type":"exact"}],"termid":"MONDO:0000451","xrefs":{"Monarch":{"xref_id":"0000451"}}}


id: PBO:0057500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 618","termid":"PBO:0057500"}


id: PBO:0071469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 10","termid":"PBO:0071469"}


id: MONDO:0957813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 91, autosomal dominant, with or without cerebellar ataxia","secondary_identifiers":["MEDGEN:1846222","UMLS:C5882701","OMIM:620538"],"termid":"MONDO:0957813","xrefs":{"Monarch":{"xref_id":"0957813"}}}


id: GO:0006385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The extension of an RNA molecule after transcription initiation and promoter clearance at an RNA polymerase III promoter by the addition of ribonucleotides catalyzed by RNA polymerase III.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"transcription elongation by RNA polymerase III","secondary_identifiers":["Reactome:R-HSA-73780"],"synonyms":[{"name":"RNA elongation from Pol III promoter","type":"exact"},{"name":"RNA polymerase III transcription elongation factor activity","type":"related"},{"name":"transcription elongation by RNA polymerase III promoter","type":"exact"},{"name":"transcription elongation from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0006385"}


id: PBO:0081684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 606","termid":"PBO:0081684"}


id: GO:0006807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete nitrogen compound metabolic process (obsolete GO:0006807)","termid":"GO:0006807"}


id: PBO:0068273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 10 (inactive)","termid":"PBO:0068273"}


id: MONDO:0007891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial generalized lentiginosis is a rare, inherited, skin hyperpigmentation disorder characterized by widespread lentigines without associated noncutaneous abnormalities. Patients present multiple brown to dark brown, non-elevated macula of 0.2 to 1 cm in diameter, spread over the entire body, sometimes including palms or soles, but never oral mucosa.","definition_xrefs":["Orphanet:231040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial generalized lentiginosis","secondary_identifiers":["OMIM:151001","SCTID:765195000","UMLS:C3492944","GARD:17158","MEDGEN:486897","MESH:C573023"],"synonyms":[{"name":"familial lentigines profusa","type":"exact"},{"name":"familial multiple lentigines syndrome without systemic involvement","type":"exact"},{"name":"lentiginosis profusa","type":"related"},{"name":"lentiginosis, diffuse","type":"related"},{"name":"lentiginosis, generalised","type":"related"},{"name":"lentiginosis, generalized","type":"related"},{"name":"lentiginosis, inherited patterned","type":"related"}],"termid":"MONDO:0007891","xrefs":{"Monarch":{"xref_id":"0007891"}}}


id: PBO:0045587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 1","termid":"PBO:0045587"}


id: MONDO:0013351
data:
  {"annotated_genes":["SJAG_00904"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88909],"is_not":false,"summary":null,"term":"MONDO:0013351"}]},"cv_name":"mondo","definition":"Infantile cerebral and cerebellar atrophy with postnatal progressive microcephaly is a rare, central nervous system malformation syndrome characterized by progressive microcephaly with profound motor delay and intellectual disability, associated with hypertonia, spasticity, clonus, and seizures, with brain imaging revealing severe cerebral and cerebellar atrophy, and poor myelination.","definition_xrefs":["Orphanet:402364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system disorder","termid":"MONDO:0002602"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00904":null},"genotype_count":0,"is_obsolete":false,"name":"infantile cerebral and cerebellar atrophy with postnatal progressive microcephaly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111262","MEDGEN:462271","GARD:10995","OMIM:613668","UMLS:C3150921"],"synonyms":[{"name":"microcephaly, postnatal progressive, with seizures and brain atrophy","type":"related"},{"name":"postnatal progressive microcephaly, seizures, and brain atrophy","type":"related"}],"termid":"MONDO:0013351","terms_by_termid":{"MONDO:0013351":null},"xrefs":{"Monarch":{"xref_id":"0013351"}}}


id: SO:0000825
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome originating in a micronucleus.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"micronuclear_sequence","termid":"SO:0000084"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"micronuclear_chromosome","synonyms":[{"name":"micronuclear chromosome","type":"exact"}],"termid":"SO:0000825"}


id: PBO:0031031
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_plasma_membrane_organization","termid":"PBO:0031031"}


id: GO:0010389
data:
  {"annotated_genes":["SJAG_01429","SJAG_02592","SJAG_01901","SJAG_00318","SJAG_03942","SJAG_03026","SJAG_03160","SJAG_01680","SJAG_02332","SJAG_02858","SJAG_00216","SJAG_04486","SJAG_04280","SJAG_04597","SJAG_01837","SJAG_00117","SJAG_03592","SJAG_01805","SJAG_04287","SJAG_03073","SJAG_01873","SJAG_02563","SJAG_03602","SJAG_02723","SJAG_02392","SJAG_00082","SJAG_00526","SJAG_01044","SJAG_00364","SJAG_01076","SJAG_01605","SJAG_02074","SJAG_03927","SJAG_01855","SJAG_00883","SJAG_03486","SJAG_01205","SJAG_05373","SJAG_00214","SJAG_04671","SJAG_02266","SJAG_02098","SJAG_02771","SJAG_02576","SJAG_01084","SJAG_03854","SJAG_01000","SJAG_06592","SJAG_03309","SJAG_04332","SJAG_00256","SJAG_02342","SJAG_01010","SJAG_00640","SJAG_01146","SJAG_01456","SJAG_03067","SJAG_01118","SJAG_03126","SJAG_00600","SJAG_04140","SJAG_03695","SJAG_04394"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113952],"is_not":false,"summary":null,"term":"GO:0010389"},{"annotations":[103370,91866,118006,96295,102462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044878"},{"annotations":[118810,108574,101106,72875,93310,95847,114021,80715,81307,102463,76666,101273,119115,118062,74091,119287,111290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[97751,96435,100341,118008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"},{"annotations":[93311,81180,101275,108575,113715,60765,119028,111291,102977,67814,90989,62305,61476,74093,77022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[58732,108606,113421,114469,116468,102922,96254,95445,106440,60662,80372,113803,108969,95099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010972"},{"annotations":[118680,94019,95686,103689,105422,96258,72491,89905,110540,112320,109190,118491,93618,113186,100915,89914,75237,100342,96297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010971"},{"annotations":[89708,103320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905287"}]},"cv_name":"biological_process","definition":"Any signaling pathway that modulates the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to M phase of the mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","PMID:17329565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle phase transition","termid":"GO:1901990"},{"relation_name":"is_a","term_name":"regulation of cell cycle G2/M phase transition","termid":"GO:1902749"},{"relation_name":"regulates","term_name":"G2/M transition of mitotic cell cycle","termid":"GO:0000086"}],"gene_count":63,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00117":null,"SJAG_00214":null,"SJAG_00216":null,"SJAG_00256":null,"SJAG_00318":null,"SJAG_00364":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00640":null,"SJAG_00883":null,"SJAG_01000":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01084":null,"SJAG_01118":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01456":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_01901":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02332":null,"SJAG_02342":null,"SJAG_02392":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02771":null,"SJAG_02858":null,"SJAG_03026":null,"SJAG_03067":null,"SJAG_03073":null,"SJAG_03126":null,"SJAG_03160":null,"SJAG_03309":null,"SJAG_03486":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_03695":null,"SJAG_03854":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04394":null,"SJAG_04486":null,"SJAG_04597":null,"SJAG_04671":null,"SJAG_05373":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044772","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of G2/M transition of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-8854518"],"synonyms":[{"name":"regulation of mitotic entry","type":"exact"}],"termid":"GO:0010389","terms_by_termid":{"GO:0007095":null,"GO:0010389":null,"GO:0010971":null,"GO:0010972":null,"GO:0031569":null,"GO:0033314":null,"GO:0044878":null,"GO:1905287":null}}


id: PBO:0111351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated protein Utp21","termid":"PBO:0111351"}


id: MONDO:0000601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A hypersensitivity reaction type II disease that involves the genitourinary system.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete autoimmune disorder of urogenital tract (obsolete MONDO:0000601)","secondary_identifiers":["DOID:0060049"],"synonyms":[{"name":"autoimmune disease of genitourinary system","type":"exact"},{"name":"genitourinary system autoimmune disease","type":"exact"},{"name":"genitourinary system hypersensitivity reaction type II disease","type":"exact"}],"termid":"MONDO:0000601","xrefs":{"Monarch":{"xref_id":"0000601"}}}


id: GO:0032880
data:
  {"annotated_genes":["SJAG_03602","SJAG_01805","SJAG_01084","SJAG_04343","SJAG_04597","SJAG_01311","SJAG_02392","SJAG_01245","SJAG_03970","SJAG_04464","SJAG_04312","SJAG_02592","SJAG_02645","SJAG_03048","SJAG_01373","SJAG_04509","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[107762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[92836,97755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903067"},{"annotations":[96296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[116470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900181"},{"annotations":[97756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"},{"annotations":[103783,95691,102363,112998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[104318,92722,96259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"},{"annotations":[100343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"},{"annotations":[93903,89758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033157"},{"annotations":[109917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905391"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of any process in which a protein is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"regulates","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":17,"genes_by_uniquename":{"SJAG_01084":null,"SJAG_01245":null,"SJAG_01311":null,"SJAG_01373":null,"SJAG_01805":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_02645":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03602":null,"SJAG_03970":null,"SJAG_04312":null,"SJAG_04343":null,"SJAG_04464":null,"SJAG_04509":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1903827"],"synonyms":[{"name":"regulation of cellular protein localisation","type":"exact"},{"name":"regulation of cellular protein localization","type":"exact"},{"name":"regulation of protein localisation","type":"exact"}],"termid":"GO:0032880","terms_by_termid":{"GO:0033157":null,"GO:0042307":null,"GO:0042308":null,"GO:0042997":null,"GO:0046827":null,"GO:0120047":null,"GO:0140325":null,"GO:1900181":null,"GO:1903067":null,"GO:1903077":null,"GO:1905391":null}}


id: GO:0052472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of its symbiont's transcription.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont transcription (obsolete GO:0052472)","termid":"GO:0052472"}


id: PBO:0003571
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADhesioN defective","termid":"PBO:0003571"}


id: GO:1990760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a monoatomic cation by a channel that opens when a change in the osmolarity occurs in the extracellular space of the cell in which the cation channel resides.","definition_xrefs":["PMID:18279313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osmosensor activity","termid":"GO:0005034"},{"relation_name":"is_a","term_name":"monoatomic cation channel activity","termid":"GO:0005261"},{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transporter activity","termid":"GO:0022890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140299","GO:0022857","GO:0005215","GO:0038023","GO:0098772"],"is_obsolete":false,"name":"osmolarity-sensing monoatomic cation channel activity","synonyms":[{"name":"osmolarity-sensing cation channel activity","type":"broad"}],"termid":"GO:1990760"}


id: PBO:0054436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1832","termid":"PBO:0054436"}


id: GO:0030530
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Particulate complex of heterogeneous nuclear RNA (hnRNA; a heterogeneous mixture of RNA molecules of high Mr with a rapid turnover rate that occurs in cell nuclei during protein synthesis; it is the form of RNA synthesized in eukaryotes by RNA polymerase II, that which is translated into protein) with protein, which is cell-specific and heterogeneous. The protein component may play a role in the processing of the hnRNA to mRNA.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete heterogeneous nuclear ribonucleoprotein complex (obsolete GO:0030530)","secondary_identifiers":["Wikipedia:Heterogeneous_ribonucleoprotein_particle"],"synonyms":[{"name":"heterogeneous nuclear ribonucleoprotein","type":"exact"},{"name":"heterogeneous nuclear ribonucleoprotein complex","type":"exact"},{"name":"hnRNP","type":"exact"}],"termid":"GO:0030530"}


id: PBO:0048884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 3, pseudogene","termid":"PBO:0048884"}


id: GO:1900504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellulosome assembly.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellulosome assembly","termid":"GO:1900503"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"negatively_regulates","term_name":"cellulosome assembly","termid":"GO:0044575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellulosome assembly","synonyms":[{"name":"down regulation of cellulosome assembly","type":"exact"},{"name":"down-regulation of cellulosome assembly","type":"exact"},{"name":"downregulation of cellulosome assembly","type":"exact"},{"name":"inhibition of cellulosome assembly","type":"narrow"}],"termid":"GO:1900504"}


id: PBO:0052832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 1-1","termid":"PBO:0052832"}


id: PBO:0089817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane peptidase complex catalytic subunit 2","termid":"PBO:0089817"}


id: GO:0030435
data:
  {"annotated_genes":["SJAG_03536","SJAG_04238","SJAG_04868","SJAG_03057","SJAG_04922","SJAG_04184","SJAG_03250","SJAG_00971","SJAG_00114","SJAG_03587","SJAG_01662","SJAG_02320","SJAG_04271","SJAG_00405","SJAG_02248","SJAG_02712","SJAG_04859","SJAG_01321","SJAG_04853","SJAG_00486","SJAG_00993","SJAG_04483","SJAG_01769","SJAG_01483","SJAG_03090","SJAG_03557","SJAG_04236","SJAG_00821","SJAG_01017","SJAG_04615","SJAG_00974","SJAG_03688","SJAG_00826","SJAG_05309","SJAG_03915","SJAG_02241","SJAG_04470","SJAG_00663","SJAG_02718","SJAG_03013","SJAG_01531","SJAG_04140","SJAG_03746","SJAG_04901","SJAG_02169","SJAG_02529","SJAG_04010","SJAG_04781","SJAG_04080","SJAG_03483","SJAG_04275"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114702,98432,98848,107072,102651,113496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030437"},{"annotations":[95902,113301],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071998"},{"annotations":[96352],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[93654,90072,90566,92118],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[74759],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[116079,119801,111043,106104,119793],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[106925,74761,93381],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031321"},{"annotations":[99466,93170,97274,100743,103641,99503,107237,115926,120565,109344,120866,121049,112091,101825],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[109675,94172,99467,101755,104853,106062,101754,115927,98782,108789],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[113184],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[104222],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[92600],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[94068],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[117973,102043,96400,101757,107967,101756],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a cellular spore, a cell form that can be used for dissemination, for survival of adverse conditions because of its heat and desiccation resistance, and/or for reproduction.","definition_xrefs":["GOC:mah","GOC:pamgo_curators","ISBN:0072992913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporulation","termid":"GO:0043934"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_00993":null,"SJAG_01017":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01531":null,"SJAG_01662":null,"SJAG_01769":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02529":null,"SJAG_02712":null,"SJAG_02718":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03090":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03557":null,"SJAG_03587":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04140":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04853":null,"SJAG_04859":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sporulation resulting in formation of a cellular spore","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Sporogenesis"],"synonyms":[{"name":"cellular spore formation by sporulation","type":"exact"},{"name":"spore biosynthesis","type":"exact"},{"name":"spore differentiation","type":"exact"},{"name":"spore formation","type":"exact"}],"termid":"GO:0030435","terms_by_termid":{"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0070583":null,"GO:0070591":null,"GO:0071998":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: PBO:0084414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Magnesium-dependent acid phosphatase; member of the haloacid dehalogenase superfamily; non-essential gene","termid":"PBO:0084414"}


id: PR:Q09840
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aah2 gene.","definition_xrefs":["UniProtKB:Q09840","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.14c","synonyms":[{"name":"1,4-alpha-D-glucan glucanohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-aah2","type":"exact"}],"termid":"PR:Q09840"}


id: MONDO:1010002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myoclonus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"},{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonus, non-human animal","secondary_identifiers":["OMIA:000689"],"termid":"MONDO:1010002","xrefs":{"Monarch":{"xref_id":"1010002"}}}


id: GO:0051821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of an organism from a second organism to another place in the environment, where the two organisms are in a symbiotic interaction. The first organism may also move to a different organism.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete dissemination or transmission of organism from other organism involved in symbiotic interaction (obsolete GO:0051821)","synonyms":[{"name":"dissemination or transmission of organism from other organism during symbiotic interaction","type":"related"}],"termid":"GO:0051821"}


id: GO:0003243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic growth in which the left ventricle grows expanding its external boundary.","definition_xrefs":["PMID:14709543","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth involved in heart morphogenesis","termid":"GO:0003241"},{"relation_name":"part_of","term_name":"cardiac left ventricle morphogenesis","termid":"GO:0003214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circumferential growth involved in left ventricle morphogenesis","termid":"GO:0003243"}


id: PBO:0067642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 815, pseudogene","termid":"PBO:0067642"}


id: GO:0034196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an acylglycerol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. An acylglycerol is any mono-, di- or triester of glycerol with (one or more) fatty acids.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"acylglycerol transport","synonyms":[{"name":"glyceride transport","type":"exact"}],"termid":"GO:0034196"}


id: GO:0051287
data:
  {"annotated_genes":["SJAG_00281","SJAG_04652","SJAG_02176","SJAG_03562","SJAG_00234","SJAG_01012","SJAG_04039","SJAG_00027","SJAG_04362","SJAG_03903","SJAG_01432","SJAG_02313","SJAG_06621","SJAG_01137","SJAG_02945","SJAG_02135","SJAG_03828","SJAG_00235","SJAG_00409","SJAG_00636","SJAG_03152","SJAG_04186","SJAG_01075","SJAG_00502","SJAG_06622"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58252,59187,60586,61566,62401,63535,63714,63825,64225,64411,65474,65959,70830,71363,71475,111381,111382,111383,111385,120812],"is_not":false,"summary":null,"term":"GO:0051287"},{"annotations":[80525,113959,60472,67254,58517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070403"}]},"cv_name":"molecular_function","definition":"Binding to nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl nucleotide binding","termid":"GO:0030554"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00234":null,"SJAG_00235":null,"SJAG_00281":null,"SJAG_00409":null,"SJAG_00502":null,"SJAG_00636":null,"SJAG_01012":null,"SJAG_01075":null,"SJAG_01137":null,"SJAG_01432":null,"SJAG_02135":null,"SJAG_02176":null,"SJAG_02313":null,"SJAG_02945":null,"SJAG_03152":null,"SJAG_03562":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04039":null,"SJAG_04186":null,"SJAG_04362":null,"SJAG_04652":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"NAD binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0051288"],"synonyms":[{"name":"NAD or NADH binding","type":"related"},{"name":"NAD+ or NADH binding","type":"related"},{"name":"nicotinamide adenine dinucleotide binding","type":"exact"}],"termid":"GO:0051287","terms_by_termid":{"GO:0051287":null,"GO:0070403":null}}


id: PBO:0027562
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_meiotic_recombination_at_silent_mating-type_cassette","termid":"PBO:0027562"}


id: MONDO:0005913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Influenza-like febrile viral disease caused by several members of the bunyaviridae family and transmitted mostly by the bloodsucking sandfly Phlebotomus papatasii.","definition_xrefs":["MESH:D010217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"},{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phlebotomus fever","secondary_identifiers":["MEDGEN:14597","ICD10CM:A93.1","SCTID:407476002","UMLS:C0030372","EFO:0007437","DOID:11360","ICD9:066.0"],"synonyms":[{"name":"Sandfly fever","type":"exact"},{"name":"Sandfly-borne Bunyavirus fever","type":"exact"},{"name":"Sandfly-borne arboviral fever","type":"exact"},{"name":"Sandfly-borne phleboviral disease","type":"exact"},{"name":"pappataci fever","type":"exact"}],"termid":"MONDO:0005913","xrefs":{"Monarch":{"xref_id":"0005913"}}}


id: MONDO:0011065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hunter-McAlpine craniosynostosis is characterized by craniosynostosis, intellectual deficit, short stature, facial dysmorphism (oval face with almond-shaped palpebral fissures, droopy eyelids and a small nose) and minor distal anomalies. It has been described in 10 patients. Transmission is autosomal dominant and the syndrome is associated with partial duplication of the long arm of chromosome 5 (5q35-5qter).","definition_xrefs":["Orphanet:97340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Hunter-McAlpine craniosynostosis","secondary_identifiers":["GARD:2754","UMLS:C1832408","MEDGEN:321949","icd11.foundation:1445975694","MESH:C536072","SCTID:721227001","OMIM:601379"],"synonyms":[{"name":"Hunter-McAlpine craniosynostosis syndrome","type":"related"},{"name":"Hunter-McAlpine syndrome","type":"related"},{"name":"craniosynostosis, mental deficiency, almond-shaped palpebral fissures, downturned mouth, mild acral-skeletal anomalies, and short stature","type":"related"}],"termid":"MONDO:0011065","xrefs":{"Monarch":{"xref_id":"0011065"}}}


id: MONDO:0004537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cervical mucinous adenocarcinoma that resembles the large intestinal adenocarcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical mucinous adenocarcinoma","termid":"MONDO:0002742"},{"relation_name":"is_a","term_name":"intestinal type adenocarcinoma","termid":"MONDO:0006254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"intestinal variant cervical mucinous adenocarcinoma","secondary_identifiers":["DOID:8339","MEDGEN:273124","UMLS:C1516422","NCIT:C40203","ONCOTREE:ICEMU"],"synonyms":[{"name":"cervical mucinous adenocarcinoma, intestinal variant","type":"exact"},{"name":"cervical mucinous adenocarcinoma, intestinal-type","type":"exact"},{"name":"intestinal type mucinous carcinoma","type":"related"}],"termid":"MONDO:0004537","xrefs":{"Monarch":{"xref_id":"0004537"}}}


id: PBO:0031147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_galactomannan_level","termid":"PBO:0031147"}


id: PBO:0068955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 199, pseudogene","termid":"PBO:0068955"}


id: PBO:0048316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 27","termid":"PBO:0048316"}


id: PBO:0038758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3B pseudogene 3","termid":"PBO:0038758"}


id: MOD:01045
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 3',5'-dichloro-L-tyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dichlorinated tyrosine","termid":"MOD:01037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3',5'-dichloro-L-tyrosine","synonyms":[{"name":"3',5'-Cl2Tyr","type":"exact"}],"termid":"MOD:01045"}


id: MONDO:1011203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteopetrosis with gingival hamartomas that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteopetrosis with gingival hamartomas, non-human animal","termid":"MONDO:1010312"},{"relation_name":"is_a","term_name":"osteopetrosis, cattle","termid":"MONDO:1011181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteopetrosis with gingival hamartomas, cattle","secondary_identifiers":["OMIA:001887-9913"],"termid":"MONDO:1011203","xrefs":{"Monarch":{"xref_id":"1011203"}}}


id: GO:0010583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cyclopentenone stimulus. Cyclopentenones are oxylipins derived from polyunsaturated fatty acids. They are structurally similar to jasmonic acid, but contain a reactive unsaturated carbonyl structure in the cyclo-ring. Cyclopentenones include phytoprostanes and 12-oxo-phytodienoic acid.","definition_xrefs":["PMID:18334669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cyclopentenone","termid":"GO:0010583"}


id: MONDO:0009897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adult polyglucosan body disease (APBD) is a glycogen storage disease of adults characterized by progressive upper and lower motor neuron dysfunction, progressive neurogenic bladder and cognitive difficulties that can lead to dementia.","definition_xrefs":["Orphanet:206583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease due to glycogen branching enzyme deficiency","termid":"MONDO:0009292"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0005244"],"is_obsolete":false,"name":"adult polyglucosan body disease","secondary_identifiers":["OMIM:263570","NANDO:2201163","GARD:108","NORD:1591","UMLS:C1849722","MESH:C564878","MEDGEN:342338","SCTID:721099001"],"synonyms":[{"name":"APBD","type":"exact"},{"name":"APBN","type":"related"},{"name":"polyglucosan body disease, adult","type":"related"},{"name":"polyglucosan body disease, adult form","type":"related"},{"name":"polyglucosan body neuropathy, adult form","type":"related"}],"termid":"MONDO:0009897","xrefs":{"Monarch":{"xref_id":"0009897"}}}


id: GO:0018317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of a carbon atom of a peptidyl-tryptophan residue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein C-linked glycosylation","termid":"GO:0018103"},{"relation_name":"is_a","term_name":"peptidyl-tryptophan modification","termid":"GO:0018211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein C-linked glycosylation via tryptophan","synonyms":[{"name":"protein amino acid C-linked glycosylation via tryptophan","type":"exact"}],"termid":"GO:0018317"}


id: PBO:0080225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VIRMA divergent transcript","termid":"PBO:0080225"}


id: PBO:0003116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domains","termid":"PBO:0003116"}


id: MONDO:0017310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Marfan and Marfan-related disorder","secondary_identifiers":["UMLS:C5681015","GARD:21129","MEDGEN:1842966","Orphanet:284993"],"termid":"MONDO:0017310","xrefs":{"Monarch":{"xref_id":"0017310"}}}


id: GO:0010607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the aggregation, arrangement and bonding together of proteins and RNA molecules to form a cytoplasmic mRNA processing body.","definition_xrefs":["GOC:krc","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic mRNA processing body assembly","termid":"GO:0010603"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"negatively_regulates","term_name":"P-body assembly","termid":"GO:0033962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytoplasmic mRNA processing body assembly","termid":"GO:0010607"}


id: GO:0102650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: acetoacetyl-ACP + L-tryptophan + ATP = cyclo-acetoacetyl-L-tryptophan + AMP + diphosphoric acid + 2 H+ + a holo-[acyl-carrier protein].","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclo-acetoacetyl-L-tryptophan synthetase activity (obsolete GO:0102650)","termid":"GO:0102650"}


id: PATO:0001007
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001007 relative latency (obsolete PATO:0001007)","termid":"PATO:0001007"}


id: MONDO:0700116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A brain disorder caused by biallelic variants in NDE1 that is characterized by extreme microcephaly (typically head circumference of more than 10 standard deviations (SD) below the mean), profound motor and intellectual disability, spasticity, and incomplete cerebral formation. Radiologic studies demonstrate overt microcephaly with cortical dysgenesis ranging from simplification to pachygyria/lissencephaly to hydranencephaly. Agenesis of the corpus callosum as well as hypoplasia of the brainstem and cerebellum are typically present.","definition_xrefs":["PMID:21529751","PMID:22526350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcephaly","termid":"MONDO:0001149"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"microcephaly with lissencephaly and/or hydranencephaly","termid":"MONDO:0700116","xrefs":{"Monarch":{"xref_id":"0700116"}}}


id: GO:0048548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pinocytosis. Pinocytosis is the process in which cells take in liquid material from their external environment; literally 'cell drinking'. Liquid is enclosed in vesicles, formed by invagination of the plasma membrane. These vesicles then move into the cell and pass their contents to endosomes.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocytosis","termid":"GO:0030100"},{"relation_name":"regulates","term_name":"pinocytosis","termid":"GO:0006907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"regulation of pinocytosis","termid":"GO:0048548"}


id: FYPO:0005135
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to linear elements is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"},{"relation_name":"is_a","term_name":"normal protein localization to chromosome","termid":"FYPO:0004997"},{"relation_name":"is_a","term_name":"normal protein localization to nucleus","termid":"FYPO:0006553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to linear element","synonyms":[{"name":"normal protein localisation to linear element","type":"exact"}],"termid":"FYPO:0005135"}


id: GO:0046774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that results in the inhibition of interferon activity within the host cell.","definition_xrefs":["PMID:10859382"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host intracellular interferon activity (obsolete GO:0046774)","synonyms":[{"name":"negative regulation by virus of intracellular interferon activity","type":"exact"},{"name":"suppression by virus of intracellular interferon activity in host","type":"exact"}],"termid":"GO:0046774"}


id: PBO:0054389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1785","termid":"PBO:0054389"}


id: GO:0018934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nitrilotriacetate, an aminotricarboxylic acid that binds bivalent metal ions in a ratio of 1:1. As an important industrial chelating agent, NTA has been widely used for various radionuclide processing and decontamination procedures, such as textile, paper and pulp processing and water treatment.","definition_xrefs":["UM-BBD_pathwayID:nta"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nitrilotriacetate metabolic process","synonyms":[{"name":"nitrilotriacetate metabolism","type":"exact"}],"termid":"GO:0018934"}


id: MONDO:0030819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Meckel syndrome","termid":"MONDO:0018921"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meckel syndrome 14","secondary_identifiers":["MEDGEN:1809650","UMLS:C5676989","OMIM:619879"],"synonyms":[{"name":"MKS14","type":"exact"},{"name":"meckel syndrome 14","type":"exact"}],"termid":"MONDO:0030819","xrefs":{"Monarch":{"xref_id":"0030819"}}}


id: MONDO:0019540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diffuse alveolar hemorrhage","secondary_identifiers":["HP:0025420","GARD:19110","UMLS:C4476767","Orphanet:90060","MEDGEN:1381751"],"synonyms":[{"name":"diffuse alveolar haemorrhage (disease)","type":"exact"},{"name":"diffuse alveolar hemorrhage","type":"exact"},{"name":"diffuse alveolar hemorrhage (disease)","type":"exact"}],"termid":"MONDO:0019540","xrefs":{"Monarch":{"xref_id":"0019540"}}}


id: GO:0060097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly, arrangement, or disassembly of cytoskeletal structures that is involved in the internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton organization","termid":"GO:0007010"},{"relation_name":"part_of","term_name":"phagocytosis, engulfment","termid":"GO:0006911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0007010","GO:0061024","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"cytoskeletal rearrangement involved in phagocytosis, engulfment","termid":"GO:0060097"}


id: PBO:0041118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 1","termid":"PBO:0041118"}


id: GO:0050917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required to receive an umami taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. Umami taste is the savory taste of meats and other foods that are rich in glutamates. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of taste","termid":"GO:0050909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of umami taste","synonyms":[{"name":"umami taste perception","type":"exact"}],"termid":"GO:0050917"}


id: PBO:0074727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 84","termid":"PBO:0074727"}


id: PBO:0075248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18","termid":"PBO:0075248"}


id: MONDO:0011274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Muenke syndrome is a syndromic craniosynostosis with significant phenotypic variability, usually characterized by coronal synostosis, midfacial retrusion, strabismus, hearing loss and developmental delay.","definition_xrefs":["Orphanet:53271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Muenke syndrome","secondary_identifiers":["icd11.foundation:1860572017","NCIT:C84904","MEDGEN:355217","UMLS:C1864436","SCTID:440350001","DOID:0060703","GARD:7097","MESH:C537369","OMIM:602849"],"synonyms":[{"name":"FGFR3-related craniosynostosis","type":"exact"},{"name":"MNKES","type":"related"},{"name":"Muenke nonsyndromic coronal craniosynostosis","type":"related"},{"name":"Muenke syndrome","type":"exact"},{"name":"syndrome of coronal craniosynostosis","type":"related"}],"termid":"MONDO:0011274","xrefs":{"Monarch":{"xref_id":"0011274"}}}


id: GO:0042973
data:
  {"annotated_genes":["SJAG_02192","SJAG_00667","SJAG_01017"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75854,79685,81854],"is_not":false,"summary":null,"term":"GO:0042973"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->3)-beta-D-glucosidic linkages in (1->3)-beta-D-glucans.","definition_xrefs":["EC:3.2.1.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01017":null,"SJAG_02192":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"glucan endo-1,3-beta-D-glucosidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:3.2.1.39-RXN"],"synonyms":[{"name":"(1->3)-beta-glucan 3-glucanohydrolase activity","type":"related"},{"name":"(1->3)-beta-glucan endohydrolase activity","type":"related"},{"name":"1,3-beta-D-glucan 3-glucanohydrolase activity","type":"related"},{"name":"1,3-beta-D-glucan glucanohydrolase activity","type":"related"},{"name":"beta-1,3-glucanase","type":"broad"},{"name":"callase activity","type":"related"},{"name":"endo-(1,3)-beta-D-glucanase activity","type":"broad"},{"name":"endo-(1->3)-beta-D-glucanase activity","type":"broad"},{"name":"endo-1,3-beta-D-glucanase","type":"broad"},{"name":"endo-1,3-beta-glucanase activity","type":"broad"},{"name":"endo-1,3-beta-glucosidase activity","type":"broad"},{"name":"kitalase activity","type":"related"},{"name":"laminaranase activity","type":"broad"},{"name":"laminarinase activity","type":"broad"},{"name":"oligo-1,3-glucosidase activity","type":"related"}],"termid":"GO:0042973","terms_by_termid":{"GO:0042973":null}}


id: PBO:0066677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RLF pseudogene 1","termid":"PBO:0066677"}


id: PBO:0056969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 25","termid":"PBO:0056969"}


id: GO:0052192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of an organism or motile cell on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete movement in environment of other organism involved in symbiotic interaction (obsolete GO:0052192)","synonyms":[{"name":"locomotion in environment of other organism during symbiotic interaction","type":"related"},{"name":"movement in environment of other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052192"}


id: MONDO:1011953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal dysplasia, non-human animal","secondary_identifiers":["OMIA:000937"],"termid":"MONDO:1011953","xrefs":{"Monarch":{"xref_id":"1011953"}}}


id: GO:0046884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of follicle-stimulating hormone, a gonadotropic glycoprotein hormone secreted by the anterior pituitary.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonadotropin secretion","termid":"GO:0032274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0023052"],"is_obsolete":false,"name":"follicle-stimulating hormone secretion","synonyms":[{"name":"FSH secretion","type":"exact"},{"name":"follicle stimulating hormone secretion","type":"exact"},{"name":"follitropin secretion","type":"exact"}],"termid":"GO:0046884"}


id: FYPO:0001864
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation takes place in cells that are not subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"mating without glucose starvation","synonyms":[{"name":"conjugation without glucose starvation","type":"exact"},{"name":"mating in the absence of glucose starvation","type":"exact"},{"name":"mating without glucose depletion","type":"exact"},{"name":"mating without glucose deprivation","type":"exact"}],"termid":"FYPO:0001864"}


id: MONDO:0013919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"idiopathic generalized epilepsy","termid":"MONDO:0005579"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, idiopathic generalized, susceptibility to, 12","secondary_identifiers":["MEDGEN:766773","UMLS:C3553859","DOID:0111313","OMIM:614847"],"synonyms":[{"name":"EIG12","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, 12","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, type 12","type":"exact"},{"name":"susceptibility to idiopathic generalised epilepsy 12","type":"related"},{"name":"susceptibility to idiopathic generalized epilepsy 12","type":"related"}],"termid":"MONDO:0013919","xrefs":{"Monarch":{"xref_id":"0013919"}}}


id: PBO:0076454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgelin 2","termid":"PBO:0076454"}


id: PBO:0039508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 28","termid":"PBO:0039508"}


id: GO:0097251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of leukotriene B4, a leukotriene composed of (6Z,8E,10E,14Z)-eicosatetraenoic acid having (5S)- and (12R)-hydroxy substituents.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene biosynthetic process","termid":"GO:0019370"},{"relation_name":"is_a","term_name":"leukotriene B4 metabolic process","termid":"GO:0036102"},{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"leukotriene B4 biosynthetic process","synonyms":[{"name":"LTB4 anabolism","type":"exact"},{"name":"LTB4 biosynthesis","type":"exact"},{"name":"LTB4 formation","type":"exact"},{"name":"LTB4 synthesis","type":"exact"},{"name":"leukotriene B4 anabolism","type":"exact"},{"name":"leukotriene B4 biosynthesis","type":"exact"},{"name":"leukotriene B4 formation","type":"exact"},{"name":"leukotriene B4 synthesis","type":"exact"}],"termid":"GO:0097251"}


id: MONDO:0000198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete linear skin defects with multiple congenital anomalies (obsolete MONDO:0000198)","termid":"MONDO:0000198","xrefs":{"Monarch":{"xref_id":"0000198"}}}


id: PBO:0074635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 29","termid":"PBO:0074635"}


id: GO:0038021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the fat-cell specific hormone leptin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["PMID:9102398","Wikipedia:Leptin_receptor","GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"leptin receptor activity","termid":"GO:0038021"}


id: PBO:0040896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein receptor type 2","termid":"PBO:0040896"}


id: PBO:0029956
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_lag_phase","termid":"PBO:0029956"}


id: MONDO:0022916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cystic hygroma lethal cleft palate (obsolete MONDO:0022916)","synonyms":[{"name":"Cowchock Wapner Kurtz syndrome","type":"related"}],"termid":"MONDO:0022916","xrefs":{"Monarch":{"xref_id":"0022916"}}}


id: MONDO:0013572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary lipodystrophy","termid":"MONDO:0020087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"Keppen-Lubinsky syndrome","secondary_identifiers":["UMLS:C3279800","Orphanet:435628","GARD:17716","MEDGEN:481430","OMIM:614098"],"synonyms":[{"name":"KEPPEN-Lubinsky syndrome","type":"related"},{"name":"KPLBS","type":"related"},{"name":"Keppen-Lubinsky syndrome","type":"exact"},{"name":"generalised lipodystrophy-progeroid features-severe intellectual disability syndrome","type":"exact"},{"name":"generalized lipodystrophy-progeroid features-severe intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0013572","xrefs":{"Monarch":{"xref_id":"0013572"}}}


id: MONDO:0007164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant spastic ataxia in which the cause of the disease is a mutation in the VAMP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant spastic ataxia","termid":"MONDO:0017846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"spastic ataxia 1","secondary_identifiers":["UMLS:C1970107","GARD:17206","ICD10CM:G11.4","OMIM:108600","MEDGEN:409988","Orphanet:251282","DOID:0050772","MESH:C566993"],"synonyms":[{"name":"SPAX1","type":"exact"},{"name":"VAMP1 autosomal dominant spastic ataxia","type":"exact"},{"name":"autosomal dominant spastic ataxia caused by mutation in VAMP1","type":"exact"},{"name":"autosomal dominant spastic ataxia type 1","type":"related"},{"name":"spastic ataxia 1, autosomal dominant","type":"related"},{"name":"spastic ataxia type 1","type":"exact"}],"termid":"MONDO:0007164","xrefs":{"Monarch":{"xref_id":"0007164"}}}


id: PATO:0001058
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001058 absolute acceleration (obsolete PATO:0001058)","termid":"PATO:0001058"}


id: PBO:0080154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VCAN antisense RNA 1","termid":"PBO:0080154"}


id: MONDO:0022400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete retinal ciliopathy due to mutation in the RPGRIP gene (obsolete MONDO:0022400)","secondary_identifiers":["Orphanet:156174"],"termid":"MONDO:0022400","xrefs":{"Monarch":{"xref_id":"0022400"}}}


id: MOD:01386
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-valine residue to 3-hydroxy-L-valine.","definition_xrefs":["RESID:AA0463","PubMed:7328054","ChEBI:141793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"},{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-L-valine","synonyms":[{"name":"(2S)-2-amino-3-hydroxy-3-methylbutanoic acid","type":"exact"},{"name":"3-hydroxy-L-valine","type":"exact"},{"name":"3-hydroxyvaline","type":"exact"},{"name":"3HyVal","type":"exact"},{"name":"MOD_RES 3-hydroxyvaline","type":"exact"}],"termid":"MOD:01386"}


id: PBO:0031702
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclear_export","termid":"PBO:0031702"}


id: MONDO:0005061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the lung and is characterized by the presence of malignant glandular epithelial cells. There is a male predilection with a male to female ratio of 2:1. Usually lung adenocarcinoma is asymptomatic and is identified through screening studies or as an incidental radiologic finding. If clinical symptoms are present they include shortness of breath, cough, hemoptysis, chest pain, and fever. Tobacco smoke is a known risk factor.","definition_xrefs":["NCIT:C3512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"non-small cell lung carcinoma","termid":"MONDO:0005233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung adenocarcinoma","secondary_identifiers":["MEDGEN:57744","UMLS:C0152013","ONCOTREE:LUAD","Orphanet:415268","DOID:3910","MESH:C538231","SCTID:254626006","EFO:0000571"],"synonyms":[{"name":"adenocarcinoma of lung","type":"exact"},{"name":"adenocarcinoma of the lung","type":"exact"},{"name":"bronchogenic lung adenocarcinoma","type":"exact"},{"name":"lung adenocarcinoma","type":"exact"},{"name":"non-small cell lung adenocarcinoma","type":"exact"},{"name":"nonsmall cell adenocarcinoma","type":"exact"}],"termid":"MONDO:0005061","xrefs":{"Monarch":{"xref_id":"0005061"}}}


id: PBO:0058486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5681a","termid":"PBO:0058486"}


id: FYPO:0004589
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which localization of the gamma-tubulin complex to the spindle pole body is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex localization","termid":"FYPO:0001440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body","synonyms":[{"name":"abnormal gamma-tubulin complex localisation to mitotic spindle pole body","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic SPB","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body during vegetative growth","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to spindle pole body during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004589"}


id: GO:0031415
data:
  {"annotated_genes":["SJAG_02726","SJAG_04631","SJAG_04179","SJAG_02920"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71783,72673,77735,79134],"is_not":false,"summary":null,"term":"GO:0031415"}]},"cv_name":"cellular_component","definition":"A conserved complex that catalyzes the transfer of an acetyl group to an N-terminal Ser, Ala, Gly, or Thr residue of a protein acceptor molecule. In Saccharomyces the complex includes Nat1p and Ard1p, and may contain additional proteins.","definition_xrefs":["PMID:12890471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein acetyltransferase complex","termid":"GO:0031414"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02726":null,"SJAG_02920":null,"SJAG_04179":null,"SJAG_04631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"NatA complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"N-terminal acetyltransferase A complex","type":"exact"}],"termid":"GO:0031415","terms_by_termid":{"GO:0031415":null}}


id: GO:0021711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature unipolar brush cell in the cerebellum. Differentiation includes the processes involved in commitment of a neuroblast to a unipolar brush cell fate. A unipolar brush cell is a glutamatergic interneuron found in the cerebellar cortex.","definition_xrefs":["GOC:jid","GOC:cls","PMID:15157725","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"cerebellar granular layer formation","termid":"GO:0021684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar unipolar brush cell differentiation","termid":"GO:0021711"}


id: PBO:0043206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CKMT2 antisense RNA 1","termid":"PBO:0043206"}


id: PBO:0073869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B1 pseudogene 5","termid":"PBO:0073869"}


id: PBO:0072208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 7","termid":"PBO:0072208"}


id: PBO:0085238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis/trans-isomerase; also activates the phosphotyrosyl phosphatase activity of protein phosphatase 2A (PP2A); regulates G1 phase progression, the osmoresponse, microtubule dynamics; subunit of the Tap42p-Pph21p-Rrd2p complex; protein abundance increases in response to DNA replication stress","termid":"PBO:0085238"}


id: GO:1901416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to ethanol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to alcohol","termid":"GO:1901419"},{"relation_name":"regulates","term_name":"response to ethanol","termid":"GO:0045471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to ethanol","termid":"GO:1901416"}


id: GO:0000702
data:
  {"annotated_genes":["SJAG_02261","SJAG_03724","SJAG_01119"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034042"},{"annotations":[98051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034043"},{"annotations":[98052,75322,76057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034039"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of oxidized bases by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site.","definition_xrefs":["GOC:elh","PMID:11554296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA N-glycosylase activity","termid":"GO:0019104"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01119":null,"SJAG_02261":null,"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0140097","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"oxidized base lesion DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000702","terms_by_termid":{"GO:0034039":null,"GO:0034042":null,"GO:0034043":null}}


id: GO:0038178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by a C5a component of the complement pathway binding to a complement receptor, and ending with regulation of a downstream cellular process. C5a is a peptide derived from the C5 complement factor.","definition_xrefs":["GOC:jc","PMID:15313431","Wikipedia:Complement_component_5a"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement receptor mediated signaling pathway","termid":"GO:0002430"},{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"complement component C5a signaling pathway","synonyms":[{"name":"complement component C5a-induced signaling pathway","type":"exact"}],"termid":"GO:0038178"}


id: GO:0001947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The tube morphogenesis process in which the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceding their future integration. Heart looping begins with dextral-looping and ends when the main regional divisions of the mature heart and primordium of the great arterial trunks become established preceding septation.","definition_xrefs":["PMID:12094232","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic heart tube morphogenesis","termid":"GO:0003143"},{"relation_name":"part_of","term_name":"determination of heart left/right asymmetry","termid":"GO:0061371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart looping","synonyms":[{"name":"cardiac looping","type":"exact"}],"termid":"GO:0001947"}


id: GO:0000247
data:
  {"annotated_genes":["SJAG_03598"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94484],"is_not":false,"summary":null,"term":"GO:0000247"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: fecosterol = episterol.","definition_xrefs":["RHEA:33435","PMID:8988026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03598":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"C-8 sterol isomerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN3O-203"],"synonyms":[{"name":"delta-8-delta-7 sterol isomerase activity","type":"exact"}],"termid":"GO:0000247","terms_by_termid":{"GO:0000247":null}}


id: PBO:0067919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 221","termid":"PBO:0067919"}


id: GO:0042948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of salicin (saligenin-beta-D-glucopyranoside), a glucoside of o-hydroxybenzylalcohol, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucoside transport","termid":"GO:0015759"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"salicin transport","termid":"GO:0042948"}


id: PBO:0041574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 21 open reading frame 58","termid":"PBO:0041574"}


id: MONDO:0014969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of pentose phosphate metabolism","termid":"MONDO:0019231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"isolated sedoheptulokinase deficiency","secondary_identifiers":["UMLS:C1291373","Orphanet:440713","MEDGEN:713680","ICD9:277.6","GARD:18652","OMIM:617213","SCTID:124309005"],"synonyms":[{"name":"SHPKD","type":"exact"},{"name":"isolated SHPK deficiency","type":"exact"},{"name":"sedoheptulokinase deficiency","type":"exact"}],"termid":"MONDO:0014969","xrefs":{"Monarch":{"xref_id":"0014969"}}}


id: PBO:0085426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polo-like kinase essential for mitotic cell cycle; controls targeting, activation of Rho1p at cell division site via Rho1p guanine nucleotide exchange factors; regulates shape of nucleus, expansion of nuclear envelope during mitosis; implicated in cell divisions in telomerase-negative strains through adaptation to DNA damage, which allows bypass of cell cycle arrest and contributes senescence-specific genome instability; human homologs PLK1, PLK3 can each complement cdc5 thermosensitive mutants","termid":"PBO:0085426"}


id: PBO:0071937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 14","termid":"PBO:0071937"}


id: MONDO:0004532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the auditory system","direct_ancestors":[{"relation_name":"is_a","term_name":"sensory system cancer","termid":"MONDO:0000649"},{"relation_name":"is_a","term_name":"auditory system disorder","termid":"MONDO:0002409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"auditory system cancer","secondary_identifiers":["NCIT:C3000","DOID:833","MESH:D004428"],"synonyms":[{"name":"auditory system cancer","type":"exact"},{"name":"cancer of auditory system","type":"exact"},{"name":"malignant auditory system neoplasm","type":"exact"},{"name":"malignant neoplasm of auditory system","type":"exact"}],"termid":"MONDO:0004532","xrefs":{"Monarch":{"xref_id":"0004532"}}}


id: PBO:0061375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 35","termid":"PBO:0061375"}


id: MONDO:1010407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epilepsy that occurs in golden hamster.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy, non-human animal","termid":"MONDO:1010001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, golden hamster","secondary_identifiers":["OMIA:000344-10036"],"termid":"MONDO:1010407","xrefs":{"Monarch":{"xref_id":"1010407"}}}


id: PBO:0045838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 28","termid":"PBO:0045838"}


id: GO:0047961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + glycine = CoA + N-acylglycine.","definition_xrefs":["MetaCyc:GLYCINE-N-ACYLTRANSFERASE-RXN","EC:2.3.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"glycine N-acyltransferase activity","secondary_identifiers":["Reactome:R-HSA-2534040","RHEA:19869"],"synonyms":[{"name":"acyl-CoA:glycine N-acyltransferase activity","type":"related"},{"name":"glycine acyltransferase activity","type":"related"},{"name":"glycine-N-acylase activity","type":"related"}],"termid":"GO:0047961"}


id: MONDO:0004983
data:
  {"annotated_genes":["SJAG_01941","SJAG_01837","SJAG_05196","SJAG_02223","SJAG_04324","SJAG_03418","SJAG_04176","SJAG_02006","SJAG_03051","SJAG_04758","SJAG_01465","SJAG_02690","SJAG_02463","SJAG_03867","SJAG_00377","SJAG_02035","SJAG_03635","SJAG_00786","SJAG_04663","SJAG_00663","SJAG_02339","SJAG_03286","SJAG_02500","SJAG_02294","SJAG_02439","SJAG_03698"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013901"},{"annotations":[89044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014961"},{"annotations":[87210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054725"},{"annotations":[87038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054726"},{"annotations":[88237,88236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054732"},{"annotations":[88648,88647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011720"},{"annotations":[86989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009461"},{"annotations":[87537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030869"},{"annotations":[87906,87907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030507"},{"annotations":[87924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030515"},{"annotations":[88943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030733"},{"annotations":[88795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030787"},{"annotations":[87792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024773"},{"annotations":[87845,87843,87844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0976123"},{"annotations":[87808,87812,87807,87809,87811,87813,87810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010767"}]},"cv_name":"mondo","definition":"A male infertility characterized by dirsuption of the process of sperm development from diploid cells into mature haploid spermatozoa.","definition_xrefs":["DOID:0111910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"male infertility","termid":"MONDO:0005372"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00377":null,"SJAG_00663":null,"SJAG_00786":null,"SJAG_01465":null,"SJAG_01837":null,"SJAG_01941":null,"SJAG_02006":null,"SJAG_02035":null,"SJAG_02223":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02439":null,"SJAG_02463":null,"SJAG_02500":null,"SJAG_02690":null,"SJAG_03051":null,"SJAG_03286":null,"SJAG_03418":null,"SJAG_03635":null,"SJAG_03698":null,"SJAG_03867":null,"SJAG_04176":null,"SJAG_04324":null,"SJAG_04663":null,"SJAG_04758":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0000279","OMIMPS:258150","UMLS:C3553794","MEDGEN:766708"],"synonyms":[{"name":"spermatogenic failure","type":"exact"}],"termid":"MONDO:0004983","terms_by_termid":{"MONDO:0009461":null,"MONDO:0010767":null,"MONDO:0011720":null,"MONDO:0013901":null,"MONDO:0014961":null,"MONDO:0024773":null,"MONDO:0030507":null,"MONDO:0030515":null,"MONDO:0030733":null,"MONDO:0030787":null,"MONDO:0030869":null,"MONDO:0054725":null,"MONDO:0054726":null,"MONDO:0054732":null,"MONDO:0976123":null},"xrefs":{"Monarch":{"xref_id":"0004983"}}}


id: PBO:0078784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 9-1","termid":"PBO:0078784"}


id: PR:O74955
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translin-associated protein X that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10741:SF1","OMA:SCHPO04270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translin-associated protein X homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.09c","secondary_identifiers":["UniProtKB:O74955"],"synonyms":[{"name":"Spom972h-TSNAX","type":"exact"}],"termid":"PR:O74955"}


id: GO:0099628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which diffusing neurotransmitter receptor becomes trapped in region of the plasma membrane.","definition_xrefs":["PMID:18832033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor diffusion trapping","termid":"GO:0098953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"neurotransmitter receptor diffusion trapping","termid":"GO:0099628"}


id: PBO:0052548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor C1","termid":"PBO:0052548"}


id: GO:0102678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (5alpha,22S,24R)-22-hydroxyergostan-3-one + NADP = H+ + (22S)-22-hydroxycampest-4-en-3-one + NADPH.","definition_xrefs":["EC:1.3.1.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 22-alpha-hydroxy-campest-4-en-3-one,NADPH:steroid 5alpha-reductase activity (obsolete GO:0102678)","termid":"GO:0102678"}


id: PBO:0085706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in septin-ER tethering; interacts with ER membrane protein, Scs2p, and Shs1p, a septin ring component, at bud neck to create ER diffusion barrier; GFP-fusion protein localizes to the cell periphery, cytoplasm, bud, and bud neck; interacts with Crm1p in two-hybrid assay; YMR124W has a paralog, YLR031W, that arose from the whole genome duplication","termid":"PBO:0085706"}


id: GO:0018439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a C-terminal peptidyl-leucine to form peptidyl-L-leucine methyl ester.","definition_xrefs":["RESID:AA0299"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-leucine methyl ester biosynthetic process from peptidyl-leucine (obsolete GO:0018439)","synonyms":[{"name":"peptidyl-leucine esterification","type":"exact"}],"termid":"GO:0018439"}


id: GO:0050079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxopropanoate = propynoate + H2O.","definition_xrefs":["RHEA:17957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acetylenecarboxylate hydratase activity","secondary_identifiers":["EC:4.2.1.27","MetaCyc:MALONATE-SEMIALDEHYDE-DEHYDRATASE-RXN","GO:0047607"],"synonyms":[{"name":"3-oxopropanoate hydro-lyase (propynoate-forming)","type":"related"},{"name":"3-oxopropanoate hydro-lyase activity","type":"related"},{"name":"acetylenecarboxylate hydratase activity, producing malonate-semialdehyde","type":"narrow"},{"name":"acetylenemonocarboxylate hydrase activity","type":"related"},{"name":"acetylenemonocarboxylate hydratase activity","type":"broad"},{"name":"acetylmonocarboxylic acid hydrase activity","type":"related"},{"name":"alkynoate hydratase activity","type":"broad"},{"name":"malonate-semialdehyde dehydratase activity","type":"related"}],"termid":"GO:0050079"}


id: PBO:0001466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gluconokinase","termid":"PBO:0001466"}


id: GO:1901477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of benomyl across a membrane.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete benomyl transmembrane transport (obsolete GO:1901477)","synonyms":[{"name":"benomyl membrane transport","type":"exact"}],"termid":"GO:1901477"}


id: SO:0001387
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified alanine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_alanine","secondary_identifiers":["MOD:00901"],"synonyms":[{"name":"ModAla","type":"exact"},{"name":"modified L alanine","type":"exact"},{"name":"modified L-alanine","type":"exact"}],"termid":"SO:0001387"}


id: PBO:0109104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF217 antisense RNA 1","termid":"PBO:0109104"}


id: PBO:0045816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 6","termid":"PBO:0045816"}


id: PBO:0075262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 15","termid":"PBO:0075262"}


id: MONDO:0008911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"histiocytoid cardiomyopathy","termid":"MONDO:0010771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0005267"],"is_obsolete":false,"name":"cardiac lipidosis, familial","secondary_identifiers":["UMLS:C1859332","GARD:15148","OMIM:212080","MEDGEN:395234","MESH:C565884"],"synonyms":[{"name":"cardiac lipidosis, familial","type":"exact"}],"termid":"MONDO:0008911","xrefs":{"Monarch":{"xref_id":"0008911"}}}


id: GO:0045576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors.","definition_xrefs":["ISBN:0781735149","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte activation","termid":"GO:0002274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mast cell activation","termid":"GO:0045576"}


id: PATO:0000544
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000544 light_quality sensitivity value (obsolete PATO:0000544)","termid":"PATO:0000544"}


id: PBO:0082488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalase A; breaks down hydrogen peroxide in the peroxisomal matrix formed by acyl-CoA oxidase (Pox1p) during fatty acid beta-oxidation","termid":"PBO:0082488"}


id: MONDO:0000457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A molecular subtype of glioblastoma characterized by lack of p53 mutations, chromosome 7 amplifications or deletions, and high levels of EGFR amplification.","definition_xrefs":["NCIT:C111694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glioblastoma","termid":"MONDO:0018177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"classical glioblastoma","secondary_identifiers":["DOID:0050803","UMLS:C3827253","MEDGEN:820001"],"synonyms":[{"name":"classical glioblastoma","type":"exact"},{"name":"glioblastoma classical subtype","type":"related"}],"termid":"MONDO:0000457","xrefs":{"Monarch":{"xref_id":"0000457"}}}


id: GO:0003851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acylsphing-4-enine + UDP-alpha-D-galactose = a beta-D-galactosyl-(1<->1')-N-acylsphing-4-enine + H+ + UDP.","definition_xrefs":["EC:2.4.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"N-acylsphingosine galactosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-6785933","MetaCyc:2.4.1.47-RXN","RHEA:13093"],"synonyms":[{"name":"2-hydroxyacylsphingosine 1-beta-galactosyltransferase activity","type":"exact"}],"termid":"GO:0003851"}


id: PBO:0089457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA queuosine modification protein Qtr3-like","termid":"PBO:0089457"}


id: PBO:0075771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF2 pseudogene 1","termid":"PBO:0075771"}


id: PBO:0047123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 167 member B","termid":"PBO:0047123"}


id: GO:0051002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the joining of a metal ion to a molecule via a nitrogen-metal bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["EC:6.6.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity","termid":"GO:0016874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ligase activity, forming nitrogen-metal bonds","termid":"GO:0051002"}


id: PBO:0004234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh1","termid":"PBO:0004234"}


id: GO:0098880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which maintains the organization and the arrangement of proteins in the presynaptic specialization.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic density organization","termid":"GO:0097106"},{"relation_name":"is_a","term_name":"maintenance of synapse structure","termid":"GO:0099558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of postsynaptic specialization structure","termid":"GO:0098880"}


id: MONDO:0100368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinopathy, which may include conditions described as retinitis pigmentosa and Leber congenital amaurosis, caused by biallelic variants in the RPE65 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025"],"is_obsolete":false,"name":"RPE65-related recessive retinopathy","synonyms":[{"name":"LCA2","type":"narrow"},{"name":"Leber congenital amaurosis 2","type":"narrow"},{"name":"Leber congenital amaurosis caused by mutation in RPE65","type":"narrow"},{"name":"Leber congenital amaurosis type 2","type":"narrow"},{"name":"RP20","type":"narrow"},{"name":"RPE65 Leber congenital amaurosis","type":"narrow"},{"name":"RPE65 retinitis pigmentosa","type":"narrow"},{"name":"RPE65-related recessive retinopathy","type":"exact"},{"name":"amaurosis congenita of Leber 2","type":"narrow"},{"name":"amaurosis congenita of Leber II","type":"narrow"},{"name":"amaurosis congenita of Leber, type 2","type":"narrow"},{"name":"recessive RPE65 retinopathy","type":"exact"},{"name":"retinitis pigmentosa 20","type":"narrow"},{"name":"retinitis pigmentosa caused by mutation in RPE65","type":"narrow"}],"termid":"MONDO:0100368","xrefs":{"Monarch":{"xref_id":"0100368"}}}


id: PBO:0002835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,6-mannosyltransferase Och1","termid":"PBO:0002835"}


id: PBO:0073676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal regulatory protein gamma","termid":"PBO:0073676"}


id: PBO:0031679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_cell_cycle_arrest_in_response_to_pheromone","termid":"PBO:0031679"}


id: PBO:0029797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cable_distribution","termid":"PBO:0029797"}


id: PBO:0081380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 221","termid":"PBO:0081380"}


id: PBO:0073005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel beta subunit 4","termid":"PBO:0073005"}


id: GO:0007341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The infiltration by sperm of the zona pellucida to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm.","definition_xrefs":["GOC:jl","PMID:21755679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-multicellular organism process","termid":"GO:0044706"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"penetration of zona pellucida","termid":"GO:0007341"}


id: PBO:0090097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-UTP complex subunit Utp8","termid":"PBO:0090097"}


id: PBO:0029191
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-excess_intracellular_endomembrane_system_present","termid":"PBO:0029191"}


id: PBO:0054576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1978","termid":"PBO:0054576"}


id: GO:0034875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: caffeine + O2 + 2 H+ + 2 e- = 1,3,7-trimethyluric acid + H2O.","definition_xrefs":["RHEA:47148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor","termid":"GO:0033695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"caffeine oxidase activity","secondary_identifiers":["EC:1.17.5.2","UM-BBD_reactionID:r1321"],"termid":"GO:0034875"}


id: PBO:0090420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 Cyb502","termid":"PBO:0090420"}


id: MONDO:0009248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose and galactose intolerance","secondary_identifiers":["UMLS:C1856686","MEDGEN:341598","MESH:C565558","OMIM:229500"],"synonyms":[{"name":"fructose and galactose intolerance","type":"exact"}],"termid":"MONDO:0009248","xrefs":{"Monarch":{"xref_id":"0009248"}}}


id: MONDO:0000188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epileptic encephalopathy resulting from impaired glucose transport into the brain.","definition_xrefs":["PMID:17718830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn carbohydrate metabolic disorder","termid":"MONDO:0019214"},{"relation_name":"is_a","term_name":"carbohydrate transport disease","termid":"MONDO:0045015"},{"relation_name":"is_a","term_name":"metabolic epilepsy","termid":"MONDO:0100033"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0005027"],"is_obsolete":false,"name":"GLUT1 deficiency syndrome","secondary_identifiers":["UMLS:C1847501","NANDO:1200799","MEDGEN:337833","DOID:0070560","OMIMPS:606777"],"synonyms":[{"name":"GLUT1 deficiency syndrome","type":"exact"},{"name":"GLUT1DS","type":"exact"}],"termid":"MONDO:0000188","xrefs":{"Monarch":{"xref_id":"0000188"}}}


id: MONDO:0007686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gray platelet syndrome (GPS) is a rare inherited bleeding disorder characterized by macrothrombocytopenia, myelofibrosis, splenomegaly and typical gray appearance of platelets on Wright stained peripheral blood smear.","definition_xrefs":["Orphanet:721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"alpha granule disease","termid":"MONDO:0020117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"gray platelet syndrome","secondary_identifiers":["UMLS:C0272302","icd11.foundation:1818085572","GARD:2562","MESH:D055652","OMIM:139090","NCIT:C84741","DOID:0111044","SCTID:51720005","MEDGEN:82900"],"synonyms":[{"name":"Alpha storage pool deficiency","type":"exact"},{"name":"BDPLT4","type":"exact"},{"name":"GPS","type":"exact"},{"name":"bleeding disorder, Platelet-type, 4","type":"related"},{"name":"gray platelet syndrome","type":"exact"},{"name":"marked decrease or absence of alpha-granules and of platelet-specific alpha-granule proteins","type":"related"},{"name":"platelet alpha-granule deficiency","type":"exact"},{"name":"platelet-type bleeding disorder 4","type":"exact"}],"termid":"MONDO:0007686","xrefs":{"Monarch":{"xref_id":"0007686"}}}


id: GO:0003397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, self-propelled movement of a neuron that contributes to the process of retrograde extension of a dendrite of a neuron in the amphid sensory organ.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration involved in dendrite retrograde extension","termid":"GO:0003395"},{"relation_name":"part_of","term_name":"amphid sensory organ dendrite retrograde extension","termid":"GO:0003391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron migration involved in amphid sensory organ dendrite retrograde extension","termid":"GO:0003397"}


id: GO:0097684
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The anterior most point of a dinoflagellate hypocone.","definition_xrefs":["Wikipedia:Dinoflagellate#Morphology","GOC:at"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"dinoflagellate hypocone","termid":"GO:0097614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dinoflagellate antapex","synonyms":[{"name":"antapex","type":"broad"}],"termid":"GO:0097684"}


id: MONDO:0014080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteopetrosis","termid":"MONDO:0017198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteosclerotic metaphyseal dysplasia","secondary_identifiers":["UMLS:C3554665","DOID:0081111","MEDGEN:767579","GARD:17931","OMIM:615198","Orphanet:500548"],"synonyms":[{"name":"OSMD","type":"exact"},{"name":"osteosclerotic metaphyseal dysplasia","type":"exact"}],"termid":"MONDO:0014080","xrefs":{"Monarch":{"xref_id":"0014080"}}}


id: PBO:0031552
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_peptidase_activity","termid":"PBO:0031552"}


id: PBO:0006379
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"confirmed intron","termid":"PBO:0006379"}


id: MONDO:1011880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal encephalopathy with seizures, non-human animal","secondary_identifiers":["OMIA:001471"],"termid":"MONDO:1011880","xrefs":{"Monarch":{"xref_id":"1011880"}}}


id: FYPO:0001922
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein dephosphorylation is normal (i.e. indistinguishable from wild type). Protein dephosphorylation is the removal of a phosphate group from a protein amino acid.","definition_xrefs":["GO:0006470","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification during vegetative growth","termid":"FYPO:0000549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein dephosphorylation during vegetative growth","synonyms":[{"name":"normal protein dephosphorylation during mitotic cell cycle","type":"related"},{"name":"normal protein/peptide dephosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001922"}


id: GO:0009626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The rapid, localized death of plant cells in response to invasion by a pathogen.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"symbiont-induced defense-related programmed cell death","termid":"GO:0034050"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant-type hypersensitive response","synonyms":[{"name":"HR","type":"broad"},{"name":"HR-PCD","type":"exact"},{"name":"plant hypersensitive response","type":"exact"}],"termid":"GO:0009626"}


id: PBO:0031780
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_endocytosis_during_vegetative_growth","termid":"PBO:0031780"}


id: PBO:0030509
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_protein_kinase_inhibitor","termid":"PBO:0030509"}


id: MONDO:0006245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma with apocrine and less often eccrine differentiation, arising from the sweat glands. It usually presents as a solitary slow growing nodule in the dermis or subcutaneous tissues. It is characterized by a nodular growth pattern and it is often associated with necrotic changes.","definition_xrefs":["NCIT:C54664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clear cell adenocarcinoma","termid":"MONDO:0005004"},{"relation_name":"is_a","term_name":"sweat gland carcinoma","termid":"MONDO:0005524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"hidradenocarcinoma","secondary_identifiers":["ICDO:8402/3","EFO:1000295","MEDGEN:137746","UMLS:C0334344"],"synonyms":[{"name":"clear cell eccrine carcinoma","type":"exact"},{"name":"hidradenocarcinoma","type":"exact"}],"termid":"MONDO:0006245","xrefs":{"Monarch":{"xref_id":"0006245"}}}


id: GO:0032252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a secretory granule is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle localization","termid":"GO:0051648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"secretory granule localization","synonyms":[{"name":"secretory granule clustering","type":"related"},{"name":"secretory granule localisation","type":"exact"}],"termid":"GO:0032252"}


id: PBO:0081975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 2","termid":"PBO:0081975"}


id: PBO:0030534
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_GDP_binding","termid":"PBO:0030534"}


id: PBO:0054280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1671","termid":"PBO:0054280"}


id: MONDO:0004260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Penetration of a peptic ulcer through the wall of duodenum or stomach allowing the leakage of luminal contents into the peritoneal cavity.","definition_xrefs":["MESH:D010439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptic ulcer disease","termid":"MONDO:0004247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"peptic ulcer perforation","secondary_identifiers":["EFO:1001389","MEDGEN:45385","SCTID:79118000","UMLS:C0030925","DOID:752"],"synonyms":[{"name":"acute peptic ulcer with perforation","type":"exact"},{"name":"peptic ulcer with perforation","type":"exact"},{"name":"perforated peptic ulcer","type":"exact"}],"termid":"MONDO:0004260","xrefs":{"Monarch":{"xref_id":"0004260"}}}


id: FYPO:0004728
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubules are formed by the extension of existing nuclear microtubules through a puncture in the nuclear envelope. Normally, cytoplasmic microtubules are nucleated from microtubule organizing centers in the cytoplasm.","definition_xrefs":["PMID:15772152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic microtubule formation from nuclear microtubules","termid":"FYPO:0004727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000054","FYPO:0001320"],"is_obsolete":false,"name":"cytoplasmic microtubule formation from nuclear microtubules following nuclear envelope breakthrough","synonyms":[{"name":"cytoplasmic microtubule formation from nuclear microtubules following nuclear envelope breakthrough during mitotic cell cycle","type":"related"},{"name":"cytoplasmic microtubule formation from nuclear microtubules following nuclear envelope breakthrough during vegetative growth","type":"exact"}],"termid":"FYPO:0004728"}


id: PBO:0045185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB5 divergent transcript","termid":"PBO:0045185"}


id: PBO:0073057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDA1 domain containing 1","termid":"PBO:0073057"}


id: MONDO:0003299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well-circumscribed benign smooth muscle neoplasm arising from the colorectal area. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:C5677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"colorectal neoplasm","termid":"MONDO:0005335"},{"relation_name":"is_a","term_name":"benign neoplasm of large intestine","termid":"MONDO:0021444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colorectal leiomyoma","secondary_identifiers":["DOID:5143","UMLS:C1333113","MEDGEN:272497"],"synonyms":[{"name":"colorectal leiomyoma","type":"exact"},{"name":"colorectum leiomyoma","type":"exact"},{"name":"large bowel leiomyoma","type":"exact"},{"name":"large intestine leiomyoma","type":"exact"},{"name":"leiomyoma of large bowel","type":"exact"},{"name":"leiomyoma of large intestine","type":"exact"},{"name":"leiomyoma of the large bowel","type":"exact"},{"name":"leiomyoma of the large intestine","type":"exact"}],"termid":"MONDO:0003299","xrefs":{"Monarch":{"xref_id":"0003299"}}}


id: PBO:0003292
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally repressed by Srb8","termid":"PBO:0003292"}


id: PBO:0085909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may interact with ribosomes, based on co-purification experiments; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YLL032C is not an essential gene","termid":"PBO:0085909"}


id: PBO:0064087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol transfer protein beta","termid":"PBO:0064087"}


id: PBO:0055483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2916","termid":"PBO:0055483"}


id: PR:Q9UUG0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fas1 gene.","definition_xrefs":["UniProtKB:Q9UUG0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid synthase subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC926.09c","synonyms":[{"name":"Spom972h-fas1","type":"exact"}],"termid":"PR:Q9UUG0"}


id: PBO:0113525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar aminopeptidase yscI; zinc metalloproteinase that belongs to peptidase family M18; often used as marker in studies of autophagy and cytosol to vacuole targeting (CVT) pathway; protein increases in abundance and relative distribution to cytoplasmic foci increases upon DNA replication stress; targeted to vacuole via Vps10p-dependent endosomal vacuolar protein sorting pathway and via CVT pathway","termid":"PBO:0113525"}


id: MOD:00790
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod - isotopic label ICPL method - The paper describes an H/D labeling strategy whereas the commercial product follows a C/13C labeling strategy. The digest is typically applied AFTER ICPL_light/heavy labeling, only Protein N-term labeling and Lys-specific labeling is applied.","definition_xrefs":["Unimod:365","URL:http://www.serva.de/products/sheets/39230-E.pdf","PubMed:15602776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, light form","synonyms":[{"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, light form","type":"related"},{"name":"ICPL","type":"related"}],"termid":"MOD:00790"}


id: GO:0000077
data:
  {"annotated_genes":["SJAG_01677","SJAG_02771","SJAG_03898","SJAG_04287","SJAG_05373","SJAG_01146","SJAG_01605","SJAG_00640","SJAG_01205","SJAG_03048","SJAG_01708","SJAG_01044","SJAG_04280","SJAG_02576","SJAG_00327","SJAG_03529","SJAG_00486","SJAG_01429","SJAG_04140","SJAG_02266","SJAG_02098","SJAG_00364","SJAG_01680","SJAG_00623","SJAG_02026","SJAG_03942","SJAG_03720","SJAG_03160","SJAG_01084","SJAG_03026","SJAG_01855","SJAG_02563","SJAG_04332","SJAG_01873","SJAG_00169","SJAG_04671","SJAG_00429"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118235,118007,95444,81925,79868,113183,116467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044773"},{"annotations":[93187,111646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[60765,81180,77022,74093,111291,119028,90989,102977,113715,61476,93311,62305,108575,101275,67814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[101276,102783,104293,91036,113716,80717,97914,81092,92318,114022,75669,93312,96436,118064,109624,81179,76103,108576,90990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a DNA damage checkpoint.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA integrity checkpoint signaling","termid":"GO:0031570"},{"relation_name":"is_a","term_name":"signal transduction in response to DNA damage","termid":"GO:0042770"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00429":null,"SJAG_00486":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_01044":null,"SJAG_01084":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01708":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02026":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03529":null,"SJAG_03720":null,"SJAG_03898":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Wikipedia:DNA_damage_checkpoint","Wikipedia:Postreplication_checkpoint","GO:0072422"],"synonyms":[{"name":"DNA damage checkpoint","type":"exact"},{"name":"DNA damage response, signal transduction resulting in cell cycle arrest","type":"narrow"},{"name":"signal transduction involved in DNA damage checkpoint","type":"exact"}],"termid":"GO:0000077","terms_by_termid":{"GO:0007095":null,"GO:0031571":null,"GO:0031573":null,"GO:0044773":null}}


id: PBO:0062857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otopetrin 2","termid":"PBO:0062857"}


id: GO:0045510
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-24.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"interleukin-24 binding","synonyms":[{"name":"IL-24 binding","type":"exact"}],"termid":"GO:0045510"}


id: MONDO:0019979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Unilateral renal hypoplasia is a form of renal hypoplasia, a renal developmental anomaly in which one kidney is small and has a deficit in the number of nephrons present.","definition_xrefs":["Orphanet:97361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal hypoplasia","termid":"MONDO:0019637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal hypoplasia, unilateral","secondary_identifiers":["UMLS:C0431691","ICD10CM:Q60.3","MEDGEN:609098","GARD:19373"],"termid":"MONDO:0019979","xrefs":{"Monarch":{"xref_id":"0019979"}}}


id: GO:1902521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an etoposide stimulus.","definition_xrefs":["PMID:23648065","GOC:dw","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucoside","termid":"GO:1904631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to etoposide","termid":"GO:1902521"}


id: PBO:0000956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex subunit Not1 (predicted)","termid":"PBO:0000956"}


id: PBO:0069962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1256, pseudogene","termid":"PBO:0069962"}


id: GO:0042750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism enters and maintains a period of dormancy in which to pass the winter. It is characterized by narcosis and by sharp reduction in body temperature and metabolic activity and by a depression of vital signs.","definition_xrefs":["GOC:jl","PMID:1945046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hibernation","secondary_identifiers":["Wikipedia:Hibernation"],"termid":"GO:0042750"}


id: PBO:0043616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMMD5 pseudogene 1","termid":"PBO:0043616"}


id: PBO:0083430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YER076C","termid":"PBO:0083430"}


id: PBO:0028219
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_cell_during_cellular_response_to_salt_stress","termid":"PBO:0028219"}


id: GO:0090253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the wing epithelium narrows along one axis and lengthens in a perpendicular axis that contributes to imaginal disc-derived wing morphogenesis.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"is_a","term_name":"convergent extension involved in organogenesis","termid":"GO:0060029"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"convergent extension involved in imaginal disc-derived wing morphogenesis","termid":"GO:0090253"}


id: PBO:0079710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 4","termid":"PBO:0079710"}


id: PBO:0067187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 248, pseudogene","termid":"PBO:0067187"}


id: FYPO:0007703
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex does not occur when the cell is subject to glucose starvation.","definition_xrefs":["PMID:26443240","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abnormal protein localization to lateral cell cortex","termid":"FYPO:0007869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to lateral cell cortex during glucose starvation","synonyms":[{"name":"abolished protein localisation to lateral cell cortex during glucose starvation","type":"exact"},{"name":"abolished protein localization to cell side during glucose starvation","type":"related"},{"name":"abolished protein localization to lateral cell cortex during cellular response to glucose starvation","type":"exact"},{"name":"abolished protein localization to lateral cell cortex during glucose depletion","type":"exact"},{"name":"abolished protein localization to lateral cell cortex during glucose deprivation","type":"exact"},{"name":"abolished protein localization to lateral cortex during glucose starvation","type":"exact"},{"name":"protein localization to lateral cell cortex during glucose starvation abolished","type":"exact"}],"termid":"FYPO:0007703"}


id: PBO:0085157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleotide binding alpha subunit of the heterotrimeric G protein; interacts with the receptor Gpr1p, has signaling role in response to nutrients; required for the recruitment of Ras-GTP at the plasma membrane and in the nucleus","termid":"PBO:0085157"}


id: GO:1904802
data:
  {"annotated_genes":["SJAG_00087"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75727],"is_not":false,"summary":null,"term":"GO:1904802"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a RITS complex.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079","PMID:26443059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00087":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"RITS complex assembly","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"RITS complex formation","type":"exact"}],"termid":"GO:1904802","terms_by_termid":{"GO:1904802":null}}


id: GO:0003231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cardiac ventricle over time, from its formation to the mature structure. A cardiac ventricle receives blood from a cardiac atrium and pumps it out of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber development","termid":"GO:0003205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac ventricle development","termid":"GO:0003231"}


id: GO:0102945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose(2-) + soyasapogenol B = UDP(3-) + a soyasapogenol B monoglucoside.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete soyasapogenol B UDP-glucosyl transferase activity (obsolete GO:0102945)","termid":"GO:0102945"}


id: PBO:0048163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 8","termid":"PBO:0048163"}


id: GO:0044423
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any constituent part of a virion, a complete fully infectious extracellular virus particle.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular_component","termid":"GO:0005575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virion component","secondary_identifiers":["Wikipedia:Virus","GO:0019012"],"synonyms":[{"name":"complete virus particle","type":"related"},{"name":"virion","type":"related"},{"name":"virion part","type":"exact"}],"termid":"GO:0044423"}


id: FYPO:0007902
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic cytokinesis begins at the same time as normal.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cytokinesis","termid":"FYPO:0001367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal onset of cytokinesis","termid":"FYPO:0007902"}


id: PBO:0074091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 6","termid":"PBO:0074091"}


id: PBO:0053297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM zinc finger domain containing 3","termid":"PBO:0053297"}


id: PBO:0073953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 2","termid":"PBO:0073953"}


id: MONDO:0002414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the stomach.","definition_xrefs":["NCIT:C5481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intra-abdominal hemangioma","termid":"MONDO:0002337"},{"relation_name":"is_a","term_name":"benign neoplasm of stomach","termid":"MONDO:0021449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric hemangioma","secondary_identifiers":["DOID:275","UMLS:C1333770","MEDGEN:234297"],"synonyms":[{"name":"angioma of stomach","type":"exact"},{"name":"angioma of the stomach","type":"exact"},{"name":"gastric angioma","type":"exact"},{"name":"gastric hemangioma","type":"exact"},{"name":"hemangioma of stomach","type":"exact"},{"name":"hemangioma of the stomach","type":"exact"},{"name":"stomach hemangioma","type":"exact"}],"termid":"MONDO:0002414","xrefs":{"Monarch":{"xref_id":"0002414"}}}


id: PBO:0084358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leucine-zipper transcriptional activator; responsible for regulation of sulfur amino acid pathway; requires different combinations of auxiliary factors Cbf1p, Met28p, Met31p and Met32p; feedforward loop exists in the regulation of genes controlled by Met4p and Met32p; can be ubiquitinated by ubiquitin ligase SCF-Met30p, is either degraded or maintained in an inactive state; regulates degradation of its own DNA-binding cofactors by targeting them to SCF-Met30p","termid":"PBO:0084358"}


id: GO:0016828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid sulfur-sulfur bond.","definition_xrefs":["EC:3.12.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydrolase activity, acting on acid sulfur-sulfur bonds","synonyms":[{"name":"hydrolase activity, acting on acid sulphur-sulphur bonds","type":"exact"}],"termid":"GO:0016828"}


id: PBO:0029259
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_G1/S_phase_transition_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029259"}


id: PBO:0049124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor class C group 5 member A","termid":"PBO:0049124"}


id: GO:0110084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein localization to cell division site involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["PMID:29343550","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell division site involved in mitotic actomyosin contractile ring assembly","termid":"GO:0110082"},{"relation_name":"is_a","term_name":"negative regulation of mitotic actomyosin contractile ring assembly","termid":"GO:1903500"},{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"negatively_regulates","term_name":"protein localization to cell division site involved in mitotic actomyosin contractile ring assembly","termid":"GO:1903476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0000281","GO:0007049","GO:0044085","GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to cell division site involved in mitotic actomyosin contractile ring assembly","termid":"GO:0110084"}


id: PBO:0089228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit","termid":"PBO:0089228"}


id: GO:0072596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in a chloroplast.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"},{"relation_name":"is_a","term_name":"protein localization to chloroplast","termid":"GO:0072598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to chloroplast","synonyms":[{"name":"establishment of protein localisation to chloroplast","type":"exact"}],"termid":"GO:0072596"}


id: MONDO:0017464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pseudoarthrosis of the limbs","termid":"MONDO:0015525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital pseudoarthrosis of the fibula","secondary_identifiers":["UMLS:C5679935","MEDGEN:1842656","Orphanet:295022","GARD:21205"],"synonyms":[{"name":"congenital pseudarthrosis of the fibula","type":"exact"}],"termid":"MONDO:0017464","xrefs":{"Monarch":{"xref_id":"0017464"}}}


id: PBO:0029453
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_elongated_cell","termid":"PBO:0029453"}


id: PBO:0029518
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vegetative_cell_shape","termid":"PBO:0029518"}


id: GO:0019612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 4-toluenecarboxylate, 4-methylbenzenecarboxylate, the anion of carboxylic acid attached to a methylbenzene molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-toluenecarboxylate metabolic process","termid":"GO:0019611"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"4-toluenecarboxylate catabolic process","secondary_identifiers":["MetaCyc:4TOLCARBDEG-PWY"],"synonyms":[{"name":"4-toluenecarboxylate breakdown","type":"exact"},{"name":"4-toluenecarboxylate catabolism","type":"exact"},{"name":"4-toluenecarboxylate degradation","type":"exact"},{"name":"p-toluate catabolic process","type":"exact"},{"name":"p-toluate catabolism","type":"exact"}],"termid":"GO:0019612"}


id: PBO:0045523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrobrevin binding protein 1","termid":"PBO:0045523"}


id: PBO:0060292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL6B pseudogene 1","termid":"PBO:0060292"}


id: GO:0042480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of eye photoreceptor development.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of eye photoreceptor cell development","termid":"GO:0042478"},{"relation_name":"negatively_regulates","term_name":"eye photoreceptor cell development","termid":"GO:0042462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eye photoreceptor cell development","synonyms":[{"name":"down regulation of eye photoreceptor cell development","type":"exact"},{"name":"down-regulation of eye photoreceptor cell development","type":"exact"},{"name":"downregulation of eye photoreceptor cell development","type":"exact"},{"name":"inhibition of eye photoreceptor cell development","type":"narrow"},{"name":"negative regulation of eye photoreceptor development","type":"exact"}],"termid":"GO:0042480"}


id: MONDO:0008900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Camptodactyly - fibrous tissue hyperplasia - skeletal dysplasia syndrome is an extremely rare chondrodysplastic malformation syndrome that is characterized by the combination of arachnodactyly, becoming evident at around the age of 10, camptodactyly (hammertoes) and scoliosis. A mild facial dysmorphism including a broad nose and flaring nostrils, and a mild intellectual disability were also noted. Camptodactyly - fibrous tissue hyperplasia - skeletal dysplasia syndrome has been described once in 3 siblings and is suspected to follow autosomal recessive transmission. There have been no further descriptions in the literature since 1972.","definition_xrefs":["Orphanet:1321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0006025"],"is_obsolete":false,"name":"camptodactyly with fibrous tissue hyperplasia and skeletal dysplasia","secondary_identifiers":["GARD:1064","MEDGEN:1848853","MESH:C537974","OMIM:211930","UMLS:C5848327"],"synonyms":[{"name":"camptodactyly with fibrous tissue hyperplasia and skeletal dysplasia","type":"exact"},{"name":"camptodactyly, fibrous tissue hyperplasia, and skeletal dysplasia","type":"related"}],"termid":"MONDO:0008900","xrefs":{"Monarch":{"xref_id":"0008900"}}}


id: GO:0004780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP + H+ + sulfate = 5'-adenylyl sulfate + phosphate.","definition_xrefs":["RHEA:16529","EC:2.7.7.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfate adenylyltransferase activity","termid":"GO:0004779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016779","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sulfate adenylyltransferase (ADP) activity","secondary_identifiers":["KEGG_REACTION:R00530","MetaCyc:SULFATE-ADENYLYLTRANSFERASE-ADP-RXN"],"synonyms":[{"name":"ADP-sulfurylase activity","type":"related"},{"name":"ADP:sulfate adenylyltransferase activity","type":"exact"},{"name":"adenosine diphosphate sulfurylase activity","type":"related"},{"name":"sulfate (adenosine diphosphate) adenylyltransferase activity","type":"related"},{"name":"sulphate adenylyltransferase (ADP) activity","type":"exact"}],"termid":"GO:0004780"}


id: PBO:0002311
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.41","termid":"PBO:0002311"}


id: GO:0005302
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80913],"is_not":false,"summary":null,"term":"GO:0005302"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-tyrosine from one side of a membrane to the other. L-tyrosine is 2-amino-3-(4-hydroxyphenyl)propanoic acid.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"aromatic amino acid transmembrane transporter activity","termid":"GO:0015173"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"L-tyrosine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0015508"],"synonyms":[{"name":"L-tyrosine permease activity","type":"exact"},{"name":"L-tyrosine transporter activity","type":"broad"},{"name":"valine/tyrosine/tryptophan permease activity","type":"related"}],"termid":"GO:0005302","terms_by_termid":{"GO:0005302":null}}


id: GO:1990779
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane signaling receptor complex found exclusively on platelets. Involved in haemostasis and thrombosis where it aids blood coagulation.","definition_xrefs":["PMID:1730602","PMID:23336709","PMID:25297919","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein complex","termid":"GO:0090665"},{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"glycoprotein Ib-IX-V complex","synonyms":[{"name":"CD42","type":"exact"},{"name":"GPIb-IX-V complex","type":"exact"},{"name":"GPIb-V-IX complex","type":"exact"}],"termid":"GO:1990779"}


id: PBO:0047142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 177 member A1 pseudogene 1","termid":"PBO:0047142"}


id: PBO:0068710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 91, pseudogene","termid":"PBO:0068710"}


id: GO:0051293
data:
  {"annotated_genes":["SJAG_02695","SJAG_02737","SJAG_00594","SJAG_02651","SJAG_00140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98888,106485,118955,78104,106817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000132"}]},"cv_name":"biological_process","definition":"The directed movement of the spindle to a specific location in the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"spindle localization","termid":"GO:0051653"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00140":null,"SJAG_00594":null,"SJAG_02651":null,"SJAG_02695":null,"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0007049","GO:0000226","GO:0008150","GO:0051179","GO:0007010"],"is_obsolete":false,"name":"establishment of spindle localization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"establishment of spindle localisation","type":"exact"},{"name":"spindle positioning","type":"exact"}],"termid":"GO:0051293","terms_by_termid":{"GO:0000132":null}}


id: PBO:0038308
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation","termid":"PBO:0038308"}


id: GO:0019455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown, via the compound cystine, of L-cysteine, catalyzed by the enzyme cystine reductase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process via cystine","termid":"GO:0019453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"L-cysteine catabolic process via cystine, using cystine reductase","synonyms":[{"name":"L-cysteine breakdown via cystine, using cystine reductase","type":"exact"},{"name":"L-cysteine degradation via cystine, using cystine reductase","type":"exact"}],"termid":"GO:0019455"}


id: PBO:0081067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type containing 1","termid":"PBO:0081067"}


id: PBO:0086719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; non-essential gene identified in a screen for mutants affected in mannosylphophorylation of cell wall components","termid":"PBO:0086719"}


id: PBO:0075184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide F pseudogene 1","termid":"PBO:0075184"}


id: PBO:0057983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3910-1","termid":"PBO:0057983"}


id: PBO:0069350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 610, pseudogene","termid":"PBO:0069350"}


id: GO:0051312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration of chromosome structure from the condensed form to a relaxed disperse form.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete chromosome decondensation (obsolete GO:0051312)","termid":"GO:0051312"}


id: PBO:0052257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratinocyte differentiation factor 1","termid":"PBO:0052257"}


id: PBO:0005158
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient overexpression of cif1 induces a stable state of viability in the absence of calnexin","termid":"PBO:0005158"}


id: PBO:0084930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-binding protein of the PUF family; binds to specific mRNAs, often in the 3' UTR; has broad specificity and binds to more than 1000 mRNAs (16% of the transcriptome); recruits the CCR4-NOT deadenylase complex to mRNAs along with Dhh1p and Dcp1p to promote deadenylation, decapping, and decay; also interacts with the Caf20p translational initiation repressor, affecting its mRNA target specificity","termid":"PBO:0084930"}


id: GO:0015612
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + L-arabinose(out) = ADP + phosphate + L-arabinose(in).","definition_xrefs":["RHEA:30007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-arabinose transmembrane transporter activity","termid":"GO:0015147"},{"relation_name":"is_a","term_name":"ABC-type monosaccharide transporter activity","termid":"GO:0015407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ABC-type L-arabinose transporter activity","secondary_identifiers":["MetaCyc:ABC-2-RXN","EC:7.5.2.12"],"synonyms":[{"name":"L-arabinose porter activity","type":"exact"},{"name":"L-arabinose-importing ATPase activity","type":"narrow"}],"termid":"GO:0015612"}


id: MONDO:0011774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the MYO3A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 30","secondary_identifiers":["OMIM:607101","DOID:0110489","GARD:22603","MEDGEN:335521","MESH:C564624","UMLS:C1846784"],"synonyms":[{"name":"DFNB30","type":"narrow"},{"name":"MYO3A autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 30","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 30","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in MYO3A","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 30","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 30","type":"exact"},{"name":"deafness, autosomal recessive 30","type":"narrow"},{"name":"deafness, autosomal recessive type 30","type":"narrow"}],"termid":"MONDO:0011774","xrefs":{"Monarch":{"xref_id":"0011774"}}}


id: GO:0010199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which boundaries between lateral organs and the meristem is established and maintained.","definition_xrefs":["PMID:12068116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of plant organ boundary","termid":"GO:0090691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organ boundary specification between lateral organs and the meristem","termid":"GO:0010199"}


id: PBO:0017798
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEp Transporter","termid":"PBO:0017798"}


id: GO:0042278
data:
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id: PBO:0052201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily Q member 1","termid":"PBO:0052201"}


id: MONDO:0017197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteopathia striata-pigmentary dermopathy-white forelock syndrome is characterized by the association of osteopathia striata (longitudinal striations through most of the long bones) with a macular, hyperpigmented dermopathy and a white forelock.","definition_xrefs":["Orphanet:2779"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"osteopathia striata-pigmentary dermopathy-white forelock syndrome","secondary_identifiers":["MEDGEN:419711","UMLS:C2931096","MESH:C536054","GARD:5562"],"synonyms":[{"name":"Whyte Murphy syndrome","type":"related"},{"name":"Whyte-Murphy syndrome","type":"exact"},{"name":"osteopathia striata associated with familial dermopathy and white forelock","type":"related"},{"name":"osteopathia striata with pigmentary dermopathy including white forelock","type":"related"}],"termid":"MONDO:0017197","xrefs":{"Monarch":{"xref_id":"0017197"}}}


