# terms

id: PATO:0000189
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of whether the bearer's disposition to perceive differences between two or more stimuli.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discrimination","termid":"PATO:0000189"}


id: FYPO:0007966
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which heterothallic haploid cells failing chromosome segregation and  consequently nuclear division fail to displace the nucleus from the septation site. This is normally mediated by actin cables.","definition_xrefs":["PMID:33506191","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized nucleus during vegetative growth","termid":"FYPO:0002071"},{"relation_name":"output_of","term_name":"abolished mitotic sister chromatid separation","termid":"FYPO:0001946"},{"relation_name":"output_of","term_name":"abnormal actin cables","termid":"FYPO:0002435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000641","FYPO:0001320","FYPO:0000138","FYPO:0000337"],"is_obsolete":false,"name":"abolished nuclear displacement from cell division site after abolished mitotic sister chromatid separation","termid":"FYPO:0007966"}


id: PBO:0050244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 22","termid":"PBO:0050244"}


id: MONDO:0859478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure, X-linked, 6","secondary_identifiers":["DOID:0070597","MEDGEN:1840198","UMLS:C5829562","OMIM:301101"],"termid":"MONDO:0859478","xrefs":{"Monarch":{"xref_id":"0859478"}}}


id: MONDO:1010565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes insipidus that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"diabetes insipidus, non-human animal","termid":"MONDO:1010051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes insipidus, chicken","secondary_identifiers":["OMIA:000278-9031"],"termid":"MONDO:1010565","xrefs":{"Monarch":{"xref_id":"1010565"}}}


id: MONDO:0016671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic hemoglobinopathy usually characterized by mild microcytic hemolysis and, very rarely, vaso-occlusive complications. Severe manifestations have been reported, including hematuria, splenic infarction, acute chest syndrome, acute episodes of pain and reversible bone marrow necrosis. The genotype is characterized by an HbS allele in combination with an HbE variant (beta26glu>lys); symptoms are due to the low allelic expression of HbE leading to HbS predominance (65+/-5%).","definition_xrefs":["Orphanet:251375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"sickle cell-hemoglobin E disease syndrome","secondary_identifiers":["MEDGEN:1669602","UMLS:C1112747","GARD:20700"],"synonyms":[{"name":"HbSE disease","type":"exact"}],"termid":"MONDO:0016671","xrefs":{"Monarch":{"xref_id":"0016671"}}}


id: PBO:0045098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DM1 locus antisense RNA","termid":"PBO:0045098"}


id: FYPO:0006736
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the proportion of cells in the population remains viable after entering stationary phase does not change in the presence of tschimganine. Normally, wild-type cell populations survive longer in the presence of tschimganine than in its absence.","definition_xrefs":["PomBase:mah","PMID:29900664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"stationary phase viability unaffected by tschimganine","synonyms":[{"name":"chronological lifespan unaffected by tschimganine","type":"related"},{"name":"loss of chronological lifespan extension by tschimganine","type":"related"},{"name":"loss of stationary phase viability extension in presence of tschimganine","type":"exact"},{"name":"stationary phase viability unaffected by TMN","type":"exact"}],"termid":"FYPO:0006736"}


id: MONDO:0009207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined deficiency of factor V and factor VIII","termid":"MONDO:0018175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"factor V and factor VIII, combined deficiency of, with normal protein C and protein C inhibitor","secondary_identifiers":["MEDGEN:346462","GARD:18631","OMIM:227310","UMLS:C1856882"],"synonyms":[{"name":"factor 5 and Factor VIII, combined deficiency Of, with normal Protein C and Protein C inhibitor","type":"related"},{"name":"factor V and Factor VIII, combined deficiency of, with normal protein c and Protein C inhibitor","type":"exact"}],"termid":"MONDO:0009207","xrefs":{"Monarch":{"xref_id":"0009207"}}}


id: GO:0060885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the shaping of the semicircular canal by removing cells in the fusion plate, forming the loops of the canals.","definition_xrefs":["GOC:mtg_apoptosis","GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"},{"relation_name":"is_a","term_name":"clearance of cells from fusion plate","termid":"GO:0060884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clearance of cells from fusion plate by apoptotic process","synonyms":[{"name":"clearance of cells from fusion plate by apoptosis","type":"narrow"}],"termid":"GO:0060885"}


id: GO:0034843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxoglutaryl-CoA + OH- = 2-oxoglutarate + CoASH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-oxoglutaryl-CoA thioesterase activity (obsolete GO:0034843)","termid":"GO:0034843"}


id: PBO:0046525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum to nucleus signaling 2","termid":"PBO:0046525"}


id: PBO:0047361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 15","termid":"PBO:0047361"}


id: PBO:0005514
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.19","termid":"PBO:0005514"}


id: PBO:0056723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meprin A subunit beta","termid":"PBO:0056723"}


id: GO:0097523
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA-RNA complex composed of RNA polymerase, template DNA, and an RNA transcript.","definition_xrefs":["GOC:cjm","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA-RNA complex","termid":"GO:0001114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transcription ternary complex","synonyms":[{"name":"transcription protein-DNA-RNA complex","type":"exact"}],"termid":"GO:0097523"}


id: PBO:0049764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 4 pseudogene 1","termid":"PBO:0049764"}


id: PBO:0045038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dispatched RND transporter family member 3","termid":"PBO:0045038"}


id: PBO:0075025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-36","termid":"PBO:0075025"}


id: MONDO:0007330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital pseudoarthrosis of the clavicle is a rare benign condition, characterized by a painless mass or swelling over the clavicle.","definition_xrefs":["Orphanet:66630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital pseudoarthrosis of clavicle","secondary_identifiers":["SCTID:70794004","UMLS:C0265565","icd11.foundation:1844778103","GARD:16673","MEDGEN:75577","MESH:C562548","OMIM:118980"],"synonyms":[{"name":"clavicle, pseudarthrosis of, congenital","type":"related"},{"name":"congenital pseudarthrosis of the clavicle","type":"exact"},{"name":"congenital pseudoarthrosis of the clavicle","type":"related"}],"termid":"MONDO:0007330","xrefs":{"Monarch":{"xref_id":"0007330"}}}


id: GO:0043268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transport","termid":"GO:0043266"},{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transport","termid":"GO:0043270"},{"relation_name":"positively_regulates","term_name":"potassium ion transport","termid":"GO:0006813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of potassium ion transport","synonyms":[{"name":"activation of potassium ion transport","type":"narrow"},{"name":"positive regulation of K+ conductance","type":"narrow"},{"name":"positive regulation of K+ transport","type":"exact"},{"name":"positive regulation of potassium conductance","type":"narrow"},{"name":"positive regulation of potassium ion conductance","type":"narrow"},{"name":"positive regulation of potassium transport","type":"exact"},{"name":"stimulation of potassium ion transport","type":"narrow"},{"name":"up regulation of potassium ion transport","type":"exact"},{"name":"up-regulation of potassium ion transport","type":"exact"},{"name":"upregulation of potassium ion transport","type":"exact"}],"termid":"GO:0043268"}


id: GO:0016165
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: linoleate + O2 = (9Z,11E)-(13S)-13-hydroperoxyoctadeca-9,11-dienoate.","definition_xrefs":["GOC:lb","EC:1.13.11.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"linoleate 13S-lipoxygenase activity","secondary_identifiers":["RHEA:22780","MetaCyc:LIPOXYGENASE-RXN"],"synonyms":[{"name":"carotene oxidase activity","type":"narrow"},{"name":"fat oxidase activity","type":"related"},{"name":"linoleate:oxygen 13-oxidoreductase activity","type":"related"},{"name":"lionoleate:O2 oxidoreductase activity","type":"related"},{"name":"lipoperoxidase activity","type":"related"},{"name":"lipoxidase activity","type":"related"},{"name":"lipoxydase activity","type":"related"},{"name":"lipoxygenase activity","type":"broad"}],"termid":"GO:0016165"}


id: FYECO:0000015
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[121142,121145,121148,121149],"is_not":false,"summary":null,"term":"FYECO:0000015"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in defined medium promoting mating and sporulation.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01355":null},"genotype_count":2,"genotypes_by_uniquename":{"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"name":"sporulation medium","references_by_uniquename":{"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_00601","SJAG_01355"],"single_locus_genotype_uniquenames":["cox6delta","rip1delta"],"synonyms":[{"name":"SPA medium","type":"narrow"},{"name":"malt extract medium","type":"narrow"},{"name":"mating medium","type":"related"}],"termid":"FYECO:0000015","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000015":null}}


id: GO:1990344
data:
  {"annotated_genes":["SJAG_05285"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117823],"is_not":false,"summary":null,"term":"GO:1990344"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a secondary cell septum following nuclear division.","definition_xrefs":["PMID:22891259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component biogenesis","termid":"GO:0044085"},{"relation_name":"is_a","term_name":"mitotic cytokinetic process","termid":"GO:1902410"},{"relation_name":"part_of","term_name":"mitotic division septum assembly","termid":"GO:0140278"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0007049","GO:0000281"],"is_obsolete":false,"name":"secondary cell septum biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990344","terms_by_termid":{"GO:1990344":null}}


id: PBO:0040056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex subunit 3 pseudogene 4","termid":"PBO:0040056"}


id: GO:0042821
data:
  {"annotated_genes":["SJAG_01543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116394],"is_not":false,"summary":null,"term":"GO:0042821"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 3-hydroxy-5-(hydroxymethyl)-2-methyl-4-pyridinecarboxaldehyde, one of the vitamin B6 compounds.","definition_xrefs":["PMID:21767669","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxal metabolic process","termid":"GO:0042817"},{"relation_name":"is_a","term_name":"vitamin B6 biosynthetic process","termid":"GO:0042819"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01543":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyridoxal biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyridoxal anabolism","type":"exact"},{"name":"pyridoxal biosynthesis","type":"exact"},{"name":"pyridoxal formation","type":"exact"},{"name":"pyridoxal synthesis","type":"exact"}],"termid":"GO:0042821","terms_by_termid":{"GO:0042821":null}}


id: GO:0016771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a nitrogenous group, other than amino, amidino or oxime, from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete transferase activity, transferring other nitrogenous groups (obsolete GO:0016771)","synonyms":[{"name":"transferase activity, transferring other nitrogenous groups","type":"exact"}],"termid":"GO:0016771"}


id: MONDO:0018766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"chronic enteropathy associated with SLCO2A1 gene","secondary_identifiers":["MEDGEN:1800261","NANDO:2100261","Orphanet:468641","GARD:21946","UMLS:C5568838","NANDO:2200925"],"synonyms":[{"name":"CEAS","type":"exact"}],"termid":"MONDO:0018766","xrefs":{"Monarch":{"xref_id":"0018766"}}}


id: MONDO:0011192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the USH1C gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 18A","secondary_identifiers":["UMLS:C1865870","MEDGEN:356389","GARD:22592","MESH:C566580","OMIM:602092","DOID:0110473"],"synonyms":[{"name":"DFNB18A","type":"narrow"},{"name":"USH1C autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 18A","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 18A","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in USH1C","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 18A","type":"narrow"},{"name":"deafness, autosomal recessive 18","type":"narrow"},{"name":"deafness, autosomal recessive 18A","type":"narrow"},{"name":"deafness, autosomal recessive 18a","type":"narrow"},{"name":"deafness, autosomal recessive type 18A","type":"narrow"}],"termid":"MONDO:0011192","xrefs":{"Monarch":{"xref_id":"0011192"}}}


id: PBO:0079013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-SeC (anticodon TCA) 1-1","termid":"PBO:0079013"}


id: MONDO:0011526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Sebastian syndrome (obsolete MONDO:0011526)","secondary_identifiers":["NCIT:C131650"],"termid":"MONDO:0011526","xrefs":{"Monarch":{"xref_id":"0011526"}}}


id: PBO:0082097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"73 kDa subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; relocates to the cytosol under hypoxic conditions; deletion mutants are temperature-sensitive; SNF12 has a paralog, RSC6, that arose from the whole genome duplication","termid":"PBO:0082097"}


id: PBO:0039993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 8A","termid":"PBO:0039993"}


id: PBO:0004940
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of PIm","termid":"PBO:0004940"}


id: PBO:0005785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5 protein Cwf26","termid":"PBO:0005785"}


id: PBO:0005876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Methionine, mitochondrial","termid":"PBO:0005876"}


id: PBO:0074428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 28","termid":"PBO:0074428"}


id: MONDO:0009063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial cystic renal disease","termid":"MONDO:0019741"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventriculomegaly-cystic kidney disease","secondary_identifiers":["UMLS:C1857423","DOID:0111625","OMIM:219730","Orphanet:443988","GARD:17757","MEDGEN:346584"],"synonyms":[{"name":"VMCKD","type":"exact"},{"name":"congenital nephrosis-cerebral ventriculomegaly syndrome","type":"exact"},{"name":"ventriculomegaly with cystic kidney disease","type":"related"}],"termid":"MONDO:0009063","xrefs":{"Monarch":{"xref_id":"0009063"}}}


id: PBO:0030055
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_adenylyl_cyclase_activity","termid":"PBO:0030055"}


id: SO:0001234
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a feature that has either intra-genome or intracellular mobility.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mobile","secondary_identifiers":["http://en.wikipedia.org/wiki/Mobile"],"termid":"SO:0001234"}


id: GO:0031844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 4 neuropeptide Y receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide Y receptor binding","termid":"GO:0031841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 4 neuropeptide Y receptor binding","synonyms":[{"name":"pancreatic polypeptide receptor binding","type":"exact"},{"name":"type 4 neuropeptide Y receptor ligand","type":"narrow"}],"termid":"GO:0031844"}


id: MONDO:1010864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alpha-mannosidosis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidosis, non-human animal","termid":"MONDO:1010172"},{"relation_name":"is_a","term_name":"lysosomal storage disease, domestic cat","termid":"MONDO:1010861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-mannosidosis, domestic cat","secondary_identifiers":["OMIA:000625-9685"],"termid":"MONDO:1010864","xrefs":{"Monarch":{"xref_id":"1010864"}}}


id: MONDO:0020590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection due to organisms from the genus Mycobacteria.","definition_xrefs":["NCIT:C26831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mycobacterial infectious disease","secondary_identifiers":["MESH:D009164","SCTID:88415009","MEDGEN:6479","UMLS:C0026918"],"synonyms":[{"name":"mycobacterial infection","type":"exact"},{"name":"mycobacteriosis","type":"exact"},{"name":"mycobacterium infection","type":"exact"}],"termid":"MONDO:0020590","xrefs":{"Monarch":{"xref_id":"0020590"}}}


id: MONDO:0008913
data:
  {"annotated_genes":["SJAG_01519"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86830],"is_not":false,"summary":null,"term":"MONDO:0008913"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"cardiac valvular defect","termid":"MONDO:0031323"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01519":null},"genotype_count":0,"is_obsolete":false,"name":"cardiac valvular defect, developmental","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C565882","MEDGEN:1823949","DOID:0080633","OMIM:212093","UMLS:C5774175"],"synonyms":[{"name":"CARDIAC valvular defect, developmental","type":"related"},{"name":"CVDD","type":"related"},{"name":"cardiac valvular defect, developmental","type":"exact"}],"termid":"MONDO:0008913","terms_by_termid":{"MONDO:0008913":null},"xrefs":{"Monarch":{"xref_id":"0008913"}}}


id: PBO:0061476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRDE-2, necessary for RNA interference, domain containing","termid":"PBO:0061476"}


id: PBO:0068182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 489","termid":"PBO:0068182"}


id: MONDO:0034661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic biliary atresia (obsolete MONDO:0034661)","secondary_identifiers":["Orphanet:498350"],"termid":"MONDO:0034661","xrefs":{"Monarch":{"xref_id":"0034661"}}}


id: MONDO:0013402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the NRL gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 27","secondary_identifiers":["MEDGEN:320323","DOID:0110397","MESH:C563526","GARD:15700","ICD10CM:H35.5","OMIM:613750","UMLS:C1834329"],"synonyms":[{"name":"NRL retinitis pigmentosa","type":"exact"},{"name":"RP27","type":"exact"},{"name":"retinal Degeneration, autosomal recessive, Clumped pigment type","type":"related"},{"name":"retinitis pigmentosa 27","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in NRL","type":"exact"},{"name":"retinitis pigmentosa type 27","type":"exact"}],"termid":"MONDO:0013402","xrefs":{"Monarch":{"xref_id":"0013402"}}}


id: PBO:0063732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase and actin regulator 4","termid":"PBO:0063732"}


id: PR:G2TRR9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB21E7.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRR9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB21E7.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.11","synonyms":[{"name":"Spom972h-SPBPB21E7.11","type":"exact"}],"termid":"PR:G2TRR9"}


id: MONDO:0003480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dysgerminoma (disease) that involves the pineal body.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant pineal area germ cell neoplasm","termid":"MONDO:0002073"},{"relation_name":"is_a","term_name":"dysgerminoma","termid":"MONDO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pineal region dysgerminoma","secondary_identifiers":["DOID:5510","MEDGEN:233328","NCIT:C7169","UMLS:C1335415"],"synonyms":[{"name":"pineal body dysgerminoma (disease)","type":"exact"},{"name":"pineal dysgerminoma","type":"exact"},{"name":"pineal region dysgerminoma","type":"exact"}],"termid":"MONDO:0003480","xrefs":{"Monarch":{"xref_id":"0003480"}}}


id: GO:0008107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-L-fucose + beta-D-galactosyl-R = GDP + alpha-L-fucosyl-(1,2)-beta-D-galactosyl-R.","definition_xrefs":["RHEA:50664","EC:2.4.1.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-(1,2)-fucosyltransferase activity","termid":"GO:0031127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"galactoside 2-alpha-L-fucosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9036987","MetaCyc:GALACTOSIDE-2-L-FUCOSYLTRANSFERASE-RXN","Reactome:R-HSA-9603982","Reactome:R-HSA-9603983"],"synonyms":[{"name":"GDP fucose-lactose fucosyltransferase activity","type":"related"},{"name":"GDP-L-fucose:lactose fucosyltransferase activity","type":"related"},{"name":"GDP-beta-L-fucose:beta-D-galactosyl-R 2-alpha-L-fucosyltransferase activity","type":"related"},{"name":"H-gene-encoded beta-galactoside alpha-1->2 fucosyltransferase activity","type":"narrow"},{"name":"H-gene-encoded beta-galactoside alpha1->2 fucosyltransferase activity","type":"related"},{"name":"alpha(1,2)-L-fucosyltransferase activity","type":"exact"},{"name":"alpha-(1->2)-L-fucosyltransferase activity","type":"related"},{"name":"alpha-2-L-fucosyltransferase activity","type":"related"},{"name":"alpha-2-fucosyltransferase activity","type":"related"},{"name":"beta-galactoside alpha-1->2 fucosyltransferase activity","type":"related"},{"name":"beta-galactoside alpha1->2 fucosyltransferase activity","type":"related"},{"name":"blood group H alpha-2-fucosyltransferase activity","type":"narrow"},{"name":"blood-group substance H-dependent fucosyltransferase activity","type":"narrow"},{"name":"galactoside 2-L-fucosyltransferase activity","type":"related"},{"name":"guanosine diphospho-L-fucose-lactose fucosyltransferase activity","type":"related"},{"name":"guanosine diphosphofucose-beta-D-galactosyl-alpha-2-L-fucosyltransferase activity","type":"related"},{"name":"guanosine diphosphofucose-galactoside 2-L-fucosyltransferase activity","type":"related"},{"name":"guanosine diphosphofucose-galactosylacetylglucosaminylgalactosyl-glucosylceramide alpha-L-fucosyltransferase activity","type":"related"},{"name":"guanosine diphosphofucose-galactosylacetylglucosaminylgalactosylglucosylceramide alpha-L-fucosyltransferase activity","type":"related"},{"name":"guanosine diphosphofucose-glycoprotein 2-alpha-L-fucosyltransferase activity","type":"related"},{"name":"guanosine diphosphofucose-glycoprotein 2-alpha-fucosyltransferase activity","type":"related"},{"name":"guanosine diphosphofucose-lactose fucosyltransferase activity","type":"related"},{"name":"secretor-type beta-galactoside alpha-1->2 fucosyltransferase activity","type":"narrow"},{"name":"secretor-type beta-galactoside alpha1->2 fucosyltransferase activity","type":"related"}],"termid":"GO:0008107"}


id: PBO:0036133
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_dimethylation_during_vegetative_growth","termid":"PBO:0036133"}


id: MONDO:1010149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tricho-dento-osseous-like syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"},{"relation_name":"is_a","term_name":"skeletal dysplasia, non-human animal","termid":"MONDO:1012973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tricho-dento-osseous-like syndrome, non-human animal","secondary_identifiers":["OMIA:002109"],"termid":"MONDO:1010149","xrefs":{"Monarch":{"xref_id":"1010149"}}}


id: GO:1900472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphatidylcholine biosynthetic process by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:8614637","GOC:TermGenie","PMID:8056324","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylcholine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900472)","synonyms":[{"name":"positive regulation of phosphatidylcholine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylcholine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylcholine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylcholine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900472"}


id: PBO:0043662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q7, hydroxylase","termid":"PBO:0043662"}


id: GO:0042092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response which is associated with resistance to extracellular organisms such as helminths and pathological conditions such as allergy, which is orchestrated by the production of particular cytokines, most notably IL-4, IL-5, IL-10, and IL-13, by any of a variety of cell types including T-helper 2 cells, eosinophils, basophils, mast cells, and nuocytes, resulting in enhanced production of certain antibody isotypes and other effects.","definition_xrefs":["GOC:add","PMID:18007680","PMID:20065995","PMID:20200518","PMID:18000958","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type 2 immune response","synonyms":[{"name":"T-helper 2 type immune response","type":"narrow"},{"name":"Th2 immune response","type":"narrow"}],"termid":"GO:0042092"}


id: PR:Q4ZGE1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8C9.19 gene.","definition_xrefs":["UniProtKB:Q4ZGE1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0618 protein C8C9.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.19","synonyms":[{"name":"Spom972h-SPAC8C9.19","type":"exact"}],"termid":"PR:Q4ZGE1"}


id: FYPO:0002419
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all vegetative cells arising from a population of germinated spores are inviable, and do not divide before dying.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population after spore germination, without cell division (obsolete FYPO:0002419)","synonyms":[{"name":"inviable germinated spore population, without cell division","type":"exact"},{"name":"inviable population of undivided germinated spores","type":"exact"}],"termid":"FYPO:0002419"}


id: GO:0102727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: campest-4-en-3beta-ol + NAD = campest-4-en-3-one + NADH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3beta-hydroxysteroid dehydrogenase activity (obsolete GO:0102727)","termid":"GO:0102727"}


id: GO:2000776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any histone H4 acetylation that is involved in a response to DNA damage stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4 acetylation involved in response to DNA damage stimulus (obsolete GO:2000776)","synonyms":[{"name":"histone H4 acetylation of DNA damage response","type":"exact"},{"name":"histone H4 acetylation of cellular DNA damage response","type":"exact"},{"name":"histone H4 acetylation of cellular response to DNA damage stimulus","type":"exact"},{"name":"histone H4 acetylation of response to DNA damage stimulus","type":"exact"},{"name":"histone H4 acetylation of response to genotoxic stress","type":"exact"}],"termid":"GO:2000776"}


id: GO:0002600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of lipid antigen via MHC class Ib.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation via MHC class Ib","termid":"GO:0002594"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0002598"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0048003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation of lipid antigen via MHC class Ib","synonyms":[{"name":"activation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"narrow"},{"name":"positive regulation of lipid antigen processing and presentation via MHC class Ib","type":"exact"},{"name":"stimulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"narrow"},{"name":"up regulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"exact"},{"name":"up-regulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"exact"},{"name":"upregulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"exact"}],"termid":"GO:0002600"}


id: PBO:0086100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for 20S pre-rRNA processing; involved in processing of the 20S pre-rRNA at site D to generate mature 18S rRNA; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0086100"}


id: GO:0102117
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A9 + S-adenosyl-L-methionine = gibberellin A9 methyl ester + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.275","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"gibberellin A9 carboxyl methyltransferase activity","secondary_identifiers":["RHEA:36119","MetaCyc:RXN-11358"],"termid":"GO:0102117"}


id: PBO:0088982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex subunit, membrane tether and lipid transfer protein Mdm34","termid":"PBO:0088982"}


id: PBO:0048654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GJD3 antisense RNA 1","termid":"PBO:0048654"}


id: MONDO:0001017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare adenocarcinoma that arises from the epididymis. It usually presents as a scrotal mass and may be associated with testicular pain.","definition_xrefs":["NCIT:C39957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epididymis cancer","termid":"MONDO:0001016"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"epididymal adenocarcinoma","secondary_identifiers":["UMLS:C1510784","MEDGEN:307180","DOID:10368"],"synonyms":[{"name":"adenocarcinoma of the epididymis","type":"exact"},{"name":"epididymal adenocarcinoma","type":"exact"},{"name":"epididymis adenocarcinoma","type":"exact"}],"termid":"MONDO:0001017","xrefs":{"Monarch":{"xref_id":"0001017"}}}


id: GO:0072122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of extraglomerular glomerular mesangium cells by cell division, resulting in the expansion of their population. Extraglomerular mesangial cells (also known as lacis cells, Goormaghtigh cells) are light-staining cells in the kidney found outside the glomerulus, near the vascular pole and macula densa.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation involved in kidney development","termid":"GO:0072111"},{"relation_name":"part_of","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extraglomerular mesangial cell proliferation","synonyms":[{"name":"Goormaghtigh proliferation","type":"related"},{"name":"lacis cell proliferation","type":"related"}],"termid":"GO:0072122"}


id: GO:0031553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of brain-derived neurotrophic factor-activated receptor activity.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of brain-derived neurotrophic factor-activated receptor activity (obsolete GO:0031553)","synonyms":[{"name":"activation of brain-derived neurotrophic factor receptor activity","type":"narrow"},{"name":"positive regulation of BDNF receptor activity","type":"exact"},{"name":"positive regulation of brain-derived neurotrophic factor receptor activity","type":"exact"},{"name":"stimulation of brain-derived neurotrophic factor receptor activity","type":"narrow"},{"name":"up regulation of brain-derived neurotrophic factor receptor activity","type":"exact"},{"name":"up-regulation of brain-derived neurotrophic factor receptor activity","type":"exact"},{"name":"upregulation of brain-derived neurotrophic factor receptor activity","type":"exact"}],"termid":"GO:0031553"}


id: MONDO:0001220
data:
  {"annotated_genes":["SJAG_04978"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011301"}]},"cv_name":"mondo","definition":"Hypoparathyroidism is an endocrine disorder in which the parathyroid glands in the neck do not produce enough parathyroid hormone (PTH). Common signs and symptoms include abdominal pain, brittle nails, cataracts, dry hair and skin, muscle cramps, tetany, pain in the face, legs, and feet, seizures, tingling sensation, and weakened tooth enamel (in children). It may be caused by injury to the parathyroid glands (e.g., during surgery). Other causes, include low blood magnesium levels, a side effect of radioactive iodine treatment for hyperthyroidism, metabolic alkalosis, DiGeorge syndrome, and type I polyglandular autoimmune syndrome. The goal of treatment is to restore the calcium and mineral balance in the body.","direct_ancestors":[{"relation_name":"is_a","term_name":"parathyroid gland disorder","termid":"MONDO:0001223"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04978":null},"genotype_count":0,"is_obsolete":false,"name":"hypoparathyroidism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:E20","ICD9:252.1","NANDO:1200775","GARD:6733","MESH:D007011","NANDO:2100124","MEDGEN:6985","NCIT:C78350","SCTID:36976004","icd11.foundation:1708733050","NANDO:2200345","EFO:0009451","UMLS:C0020626","DOID:11199"],"synonyms":[{"name":"hypoparathyroidism, idiopathic (subtype)","type":"related"},{"name":"parathyroid, underactivity of","type":"related"}],"termid":"MONDO:0001220","terms_by_termid":{"MONDO:0011301":null},"xrefs":{"Monarch":{"xref_id":"0001220"}}}


id: GO:0006058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a mannoprotein, a protein that contains covalently bound mannose residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannoprotein metabolic process","termid":"GO:0006056"},{"relation_name":"is_a","term_name":"glycoprotein catabolic process","termid":"GO:0006516"},{"relation_name":"is_a","term_name":"proteolysis involved in protein catabolic process","termid":"GO:0051603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"mannoprotein catabolic process","synonyms":[{"name":"mannoprotein breakdown","type":"exact"},{"name":"mannoprotein catabolism","type":"exact"},{"name":"mannoprotein degradation","type":"exact"}],"termid":"GO:0006058"}


id: MONDO:0008048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited neuromuscular disorder defined by numerous centrally placed nuclei on muscle biopsy and clinical features of a congenital myopathy.","definition_xrefs":["Orphanet:169189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"congenital structural myopathy","termid":"MONDO:0002921"},{"relation_name":"is_a","term_name":"centronuclear myopathy","termid":"MONDO:0018947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant centronuclear myopathy","secondary_identifiers":["UMLS:C4551952","NCIT:C126689","DOID:0111217","OMIM:614408","DOID:0111223","GARD:12719","MEDGEN:1645741","OMIM:160150","SCTID:716696006"],"synonyms":[{"name":"AD-CNM","type":"exact"},{"name":"CNM1","type":"exact"},{"name":"CNM3","type":"related"},{"name":"DNM2-related centronuclear myopathy","type":"related"},{"name":"autosomal dominant centronuclear myopathy","type":"exact"},{"name":"autosomal dominant centronuclear myopathy caused by mutation in MYF6","type":"exact"},{"name":"centronuclear myopathy 1","type":"exact"},{"name":"centronuclear myopathy, autosomal dominant","type":"exact"},{"name":"centronuclear myopathy, autosomal, modifier of","type":"exact"},{"name":"myopathy, centronuclear, 1","type":"exact"},{"name":"myopathy, centronuclear, 3","type":"exact"},{"name":"myopathy, centronuclear, autosomal dominant","type":"exact"},{"name":"myopathy, centronuclear, type 1","type":"exact"},{"name":"myopathy, centronuclear, type 3","type":"exact"},{"name":"myotubular myopathy, autosomal dominant","type":"exact"}],"termid":"MONDO:0008048","xrefs":{"Monarch":{"xref_id":"0008048"}}}


id: PBO:0060937
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFE2 like bZIP transcription factor 1","termid":"PBO:0060937"}


id: GO:2000262
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id: GO:0051177
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id: PR:Q9USR4
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec27 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USR4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.05c","synonyms":[{"name":"Spom972h-rec27","type":"exact"},{"name":"meiotically up-regulated gene 41 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USR4"}


id: PBO:0078924
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon ACG) 1-3","termid":"PBO:0078924"}


id: PBO:0046780
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EYA transcriptional coactivator and phosphatase 1","termid":"PBO:0046780"}


id: PBO:0044560
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in azoospermia 1","termid":"PBO:0044560"}


id: PBO:0050832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HYOU1 antisense RNA 1","termid":"PBO:0050832"}


id: MONDO:0011406
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholesteatoma, congenital","secondary_identifiers":["MEDGEN:95999","SCTID:232262007","MESH:C562858","OMIM:604183","UMLS:C0395886"],"synonyms":[{"name":"cholesteatoma, congenital","type":"exact"}],"termid":"MONDO:0011406","xrefs":{"Monarch":{"xref_id":"0011406"}}}


id: GO:1900596
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (+)-kotanin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"(+)-kotanin metabolic process","termid":"GO:1900594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"(+)-kotanin biosynthetic process","synonyms":[{"name":"(+)-kotanin anabolism","type":"exact"},{"name":"(+)-kotanin biosynthesis","type":"exact"},{"name":"(+)-kotanin formation","type":"exact"},{"name":"(+)-kotanin synthesis","type":"exact"}],"termid":"GO:1900596"}


id: PBO:0005427
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF Rgf3","termid":"PBO:0005427"}


id: PATO:0001790
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A density which is lower relative to the normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"dense","termid":"PATO:0001164"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased mass density","synonyms":[{"name":"low density","type":"exact"}],"termid":"PATO:0001790"}


id: FYPO:0004744
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin maintenance is normal (i.e. indistinguishable from wild type) in the context of chromatin silencing at centromere outer repeat regions.","definition_xrefs":["PMID:24240238","GO:0070829","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal heterochromatin maintenance involved in chromatin silencing at centromere outer repeat","synonyms":[{"name":"normal heterochromatin maintenance involved in chromatin silencing at centromere otr","type":"exact"},{"name":"normal heterochromatin maintenance involved in chromatin silencing at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal heterochromatin maintenance involved in chromatin silencing at centromere outer repeat during vegetative growth","type":"exact"},{"name":"normal heterochromatin maintenance involved in chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"normal heterochromatin maintenance involved in chromatin silencing at pericentric region","type":"related"},{"name":"normal heterochromatin maintenance involved in chromatin silencing at pericentromeric region","type":"related"}],"termid":"FYPO:0004744"}


id: SO:0001347
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"1_methylpseudouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one_methylpseudouridine","secondary_identifiers":["RNAMOD:055"],"synonyms":[{"name":"1-methylpseudouridine","type":"exact"},{"name":"m1Y","type":"exact"},{"name":"one methylpseudouridine","type":"exact"}],"termid":"SO:0001347"}


id: RO:0002380
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  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is a branching part of y if and only if x is part of y and x is connected directly or indirectly to the main stem of y","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"},{"relation_name":"is_a","term_name":"in_branching_relationship_with","termid":"RO:0002375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branching_part_of","termid":"RO:0002380"}


id: MOD:00348
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-carbamoyl-L-alanine.","definition_xrefs":["PubMed:12203680","RESID:AA0343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"},{"relation_name":"is_a","term_name":"alpha-aminocarbamoylated residue","termid":"MOD:01679"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-carbamoyl-L-alanine","synonyms":[{"name":"(S)-2-(carbamoylamino)propanoic acid","type":"exact"},{"name":"2-ureidopropanoic acid","type":"exact"},{"name":"MOD_RES N-carbamoylalanine","type":"exact"},{"name":"N-carbamoyl-L-alanine","type":"exact"},{"name":"N-carbamylalanine","type":"exact"},{"name":"N2CbmAla","type":"exact"}],"termid":"MOD:00348"}


id: GO:0098657
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id: MONDO:0001102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chronic endophthalmitis (obsolete MONDO:0001102)","termid":"MONDO:0001102","xrefs":{"Monarch":{"xref_id":"0001102"}}}


id: GO:0009526
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The double lipid bilayer enclosing a plastid and separating its contents from the rest of the cytoplasm; includes the intermembrane space.","definition_xrefs":["GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle envelope","termid":"GO:0031967"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid envelope","termid":"GO:0009526"}


id: FYPO:0009103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the recoil distance of the cytokynetic ring after ring ablation is increased with respect to wild type. Experimentally, a localised cut or ablation is typically achieved using a laser. This distance, in combination with the timing of recoil are used to compute effective stiffness and drag of the ring components. See PMID:36980258.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring","termid":"FYPO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0004803","FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased actomyosin contractile ring recoil distance after ring ablation","secondary_identifiers":["PMID:36980258"],"synonyms":[{"name":"increased cytokinetic ring recoil distance after laser ablation","type":"broad"}],"termid":"FYPO:0009103"}


id: GO:0032113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of carbohydrate phosphatase activity, the catalysis of the hydrolysis of phosphate from a carbohydrate phosphate.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of carbohydrate phosphatase activity (obsolete GO:0032113)","termid":"GO:0032113"}


id: MONDO:0021497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the telencephalon.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of cerebral hemisphere","termid":"MONDO:0021374"},{"relation_name":"is_a","term_name":"benign neoplasm of brain","termid":"MONDO:0021451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of cerebrum","secondary_identifiers":["icd11.foundation:1857115524","NCIT:C8548","MEDGEN:195785","UMLS:C0686378","SCTID:275269004"],"synonyms":[{"name":"benign cerebral hemispheric neoplasm","type":"exact"},{"name":"benign cerebral hemispheric tumor","type":"exact"},{"name":"benign cerebral hemispheric tumour","type":"exact"},{"name":"benign cerebral neoplasm","type":"exact"},{"name":"benign cerebral tumor","type":"exact"},{"name":"benign cerebral tumour","type":"exact"},{"name":"benign neoplasm of cerebral hemispheres","type":"exact"},{"name":"benign neoplasm of the cerebral hemispheres","type":"exact"},{"name":"benign neoplasm of the cerebrum","type":"exact"},{"name":"benign tumor of cerebral hemispheres","type":"exact"},{"name":"benign tumor of cerebrum","type":"exact"},{"name":"benign tumor of the cerebral hemispheres","type":"exact"},{"name":"benign tumor of the cerebrum","type":"exact"},{"name":"benign tumour of cerebral hemispheres","type":"exact"},{"name":"benign tumour of cerebrum","type":"exact"},{"name":"benign tumour of the cerebral hemispheres","type":"exact"},{"name":"benign tumour of the cerebrum","type":"exact"},{"name":"telencephalon benign neoplasm","type":"exact"}],"termid":"MONDO:0021497","xrefs":{"Monarch":{"xref_id":"0021497"}}}


id: GO:0097532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis caused by the chemical structure of the anion portion of a dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form.","definition_xrefs":["PMID:19170886","GOC:aa","GOC:go_curators","GOC:BHF","GOC:rl","Wikipedia:Acid","PMID:10615049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to acid chemical","termid":"GO:0001101"},{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stress response to acid chemical","synonyms":[{"name":"response to acid stress","type":"broad"},{"name":"stress response to acid","type":"broad"}],"termid":"GO:0097532"}


id: PBO:0050975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon related developmental regulator 1","termid":"PBO:0050975"}


id: GO:0120153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a carbohydrate in the presence of calcium.","definition_xrefs":["PMID:25912189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate binding","termid":"GO:0030246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"calcium-dependent carbohydrate binding","termid":"GO:0120153"}


id: MONDO:1012162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital melanoma, non-human animal","termid":"MONDO:1011811"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital melanoma, pig","secondary_identifiers":["OMIA:000634-9823"],"termid":"MONDO:1012162","xrefs":{"Monarch":{"xref_id":"1012162"}}}


id: FYPO:0003318
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype observed in the vegetative growth phase of the life cycle in which galactose-specific flocculation does not occur. Galactose-specific flocculation is the non-sexual aggregation of cells, mediated via the binding of cell wall proteins on one cell to galactose residues on the other.","definition_xrefs":["PomBase:mah","GO:0036349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished galactose-specific flocculation","termid":"FYPO:0005504"},{"relation_name":"is_a","term_name":"abolished flocculation during vegetative growth","termid":"FYPO:0009112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished galactose-specific flocculation during vegetative growth","synonyms":[{"name":"abolished cell-cell adhesion involved in galactose-specific flocculation during vegetative growth","type":"exact"},{"name":"abolished galactose-specific flocculation during mitotic cell cycle","type":"related"},{"name":"galactose-specific flocculation abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003318"}


id: PBO:0048792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha i3","termid":"PBO:0048792"}


id: PBO:0080911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta","termid":"PBO:0080911"}


id: GO:0007639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of the steady-state number of cells within a population of cells in the meristem.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meristem growth","termid":"GO:0010075"},{"relation_name":"is_a","term_name":"homeostasis of number of cells within a tissue","termid":"GO:0048873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"homeostasis of number of meristem cells","termid":"GO:0007639"}


id: PBO:0027472
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cyclosporin_A_binding","termid":"PBO:0027472"}


id: MONDO:0018501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare stomach carcinoma.","gene_count":0,"genotype_count":0,"name":"obsolete rare carcinoma of stomach (obsolete MONDO:0018501)","secondary_identifiers":["Orphanet:423771"],"synonyms":[{"name":"rare gastric carcinoma","type":"exact"},{"name":"rare stomach carcinoma","type":"exact"}],"termid":"MONDO:0018501","xrefs":{"Monarch":{"xref_id":"0018501"}}}


id: PBO:0003286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone promoter control protein Hip4","termid":"PBO:0003286"}


id: CHEBI:16480
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide","termid":"CHEBI:16480"}


id: PBO:0084694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial DNA polymerase gamma; single subunit of mitochondrial DNA polymerase in yeast, in contrast to metazoan complex of catalytic and accessory subunits; polymorphic in yeast, petites occur more frequently in some lab strains; human ortholog POLG complements yeast mip1 mutant; mutations in human POLG associated with Alpers-Huttenlocher syndrome (AHS), progressive external ophthalmoplegia (PEO), parkinsonism, other mitochondrial diseases","termid":"PBO:0084694"}


id: GO:0009038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + undecaprenol = ADP + undecaprenyl phosphate.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"undecaprenol kinase activity","synonyms":[{"name":"ATP:undecaprenol phosphotransferase activity","type":"related"},{"name":"C55-isoprenoid alcohol kinase activity","type":"related"},{"name":"C55-isoprenoid alcohol phosphokinase activity","type":"related"},{"name":"C55-isoprenyl alcohol phosphokinase activity","type":"related"},{"name":"isoprenoid alcohol kinase (phosphorylating)","type":"broad"},{"name":"isoprenoid alcohol kinase activity","type":"broad"},{"name":"isoprenoid alcohol phosphokinase activity","type":"broad"},{"name":"isoprenoid-alcohol kinase activity","type":"broad"},{"name":"polyisoprenol kinase activity","type":"broad"}],"termid":"GO:0009038"}


id: PBO:0072777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAC3 domain containing 1","termid":"PBO:0072777"}


id: MONDO:0011282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressor gene on chromosome 11","secondary_identifiers":["OMIM:603040","MEDGEN:355171","UMLS:C1864232"],"synonyms":[{"name":"Nonsmall cell lung cancer suppressor","type":"related"},{"name":"Tsg11","type":"related"},{"name":"nonsmall cell lung cancer","type":"exact"},{"name":"tumor suppressor Gene on chromosome type 11","type":"exact"},{"name":"tumor suppressor gene on chromosome 11","type":"exact"},{"name":"tumour suppressor Gene on chromosome type 11","type":"exact"}],"termid":"MONDO:0011282","xrefs":{"Monarch":{"xref_id":"0011282"}}}


id: GO:0010720
data:
  {"annotated_genes":["SJAG_02169","SJAG_00514","SJAG_02392","SJAG_03581","SJAG_04853"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97748,91735,96473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[104222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[92600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"positively_regulates","term_name":"cell development","termid":"GO:0048468"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell development","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010720","terms_by_termid":{"GO:0051519":null,"GO:0075296":null,"GO:1903024":null}}


id: MONDO:0003245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hepatocellular carcinoma that develops following exposure to aflatoxin.","definition_xrefs":["NCIT:C27922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatocellular carcinoma","termid":"MONDO:0007256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0002515"],"is_obsolete":false,"name":"aflatoxin-related hepatocellular carcinoma","secondary_identifiers":["MEDGEN:231047","UMLS:C1332222","DOID:5022"],"synonyms":[{"name":"aflatoxins-related hepatocellular cancer","type":"exact"},{"name":"aflatoxins-related hepatocellular carcinoma","type":"exact"}],"termid":"MONDO:0003245","xrefs":{"Monarch":{"xref_id":"0003245"}}}


id: GO:0015723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of bilirubin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"bilirubin transport","termid":"GO:0015723"}


id: PBO:0087639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the exocyst complex; the exocyst mediates polarized targeting and tethering of post-Golgi secretory vesicles to sites of exocytosis prior to SNARE-mediated fusion; PtdIns[4,5]P2-binding protein that localizes to exocytic sites in a Rho1p-dependent, actin-independent manner, targeting and anchoring the exocyst to the plasma membrane with Exo70p; direct GTP Rho1p effector; required for ER inheritance; relocalizes away from bud neck upon DNA replication stress","termid":"PBO:0087639"}


id: GO:0006451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The continuation of translation beyond a stop codon by the use of a special tRNA that recognizes the UAG and UGA codons as modified amino acids, rather than as termination codons.","definition_xrefs":["GOC:jsg","PMID:11179232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational elongation","termid":"GO:0006414"},{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"translational readthrough","synonyms":[{"name":"natural nonsense suppression","type":"related"}],"termid":"GO:0006451"}


id: SO:1000115
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000115 sequence_variant_causing_complex_3D_structural_change (obsolete SO:1000115)","synonyms":[{"name":"mutation causing complex 3D structural change","type":"related"},{"name":"sequence variant causing complex 3D structural change","type":"exact"}],"termid":"SO:1000115"}


id: GO:0099033
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic recycling endosome membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of postsynaptic recycling endosome membrane (obsolete GO:0099033)","termid":"GO:0099033"}


id: PBO:0069805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1091, pseudogene","termid":"PBO:0069805"}


id: FYPO:0004598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is increased during G2 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to chromatin during mitotic G2 phase","synonyms":[{"name":"increased protein localisation to chromatin during mitotic G2 phase","type":"exact"},{"name":"increased protein localization to chromatin during mitotic G2 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0004598"}


id: PBO:0053150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A pseudogene 7","termid":"PBO:0053150"}


id: MONDO:0859572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac valvular defect","termid":"MONDO:0031323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiac valvular dysplasia 2","secondary_identifiers":["MEDGEN:1823999","OMIM:620067","UMLS:C5774226"],"termid":"MONDO:0859572","xrefs":{"Monarch":{"xref_id":"0859572"}}}


id: GO:0047042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NAD(P)+ + androsterone = NAD(P)H + H+ + 5-alpha-androstane-3,17-dione. The reaction is B-specific (i.e. the pro-S hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NAD(P)+.","definition_xrefs":["EC:1.1.1.50"],"gene_count":0,"genotype_count":0,"name":"obsolete androsterone dehydrogenase (B-specific) activity (obsolete GO:0047042)","secondary_identifiers":["Wikipedia:3alpha-hydroxysteroid_dehydrogenase_(B-specific)"],"termid":"GO:0047042"}


id: PBO:0091018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTPase Ryh1","termid":"PBO:0091018"}


id: GO:0048673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which outgrowths develop from the axons of intact undamaged neurons as a result of injury to an axon. The collateral sprouts typically appear from undamaged axons in a tissue which has had part of its nerve supply removed, and they can often innervate successfully any cells that have lost some or all of their original synaptic input.","definition_xrefs":["GOC:jid","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon regeneration","termid":"GO:0031103"},{"relation_name":"is_a","term_name":"collateral sprouting","termid":"GO:0048668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collateral sprouting of intact axon in response to injury","termid":"GO:0048673"}


id: PBO:0078335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 1-7","termid":"PBO:0078335"}


id: PBO:0084601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YLR312C-B was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, SPH1/YLR313C","termid":"PBO:0084601"}


id: PBO:0086196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that activates Rub1p (NEDD8) before neddylation; acts together with Ula1p; may play a role in protein degradation; GFP-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0086196"}


id: MONDO:1012023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"distal axonopathy, non-human animal","termid":"MONDO:1011831"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal axonopathy, domestic cat","secondary_identifiers":["OMIA:000098-9685"],"termid":"MONDO:1012023","xrefs":{"Monarch":{"xref_id":"1012023"}}}


id: MONDO:0013047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition that affects how the body breaks down sugar to use as energy in muscle cells. People withthis conditionexperience fatigue, muscle pain, and cramps during exercise (exercise intolerance). In some people,high-intensity exercise or other strenuous activity leads to the breakdown of muscle tissue (rhabdomyolysis), which can lead to myoglobinuria (rust-colored urine indicating breakdown of muscle tissue) and kidney damage. A skin rash may also develop. The severity of the signs and symptoms varies greatly among affected individuals. Lactate dehydrogenase A deficiency is caused by mutations in the LDHA gene. This condition is inherited in an autosomal recessive pattern.","definition_xrefs":["GARD:0003160"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete muscular glycogenosis (obsolete MONDO:0016118)","termid":"MONDO:0016118"},{"relation_name":"excluded_subClassOf","term_name":"glycogen storage disease due to lactate dehydrogenase deficiency","termid":"MONDO:0016527"},{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"},{"relation_name":"is_a","term_name":"disorder of glycolysis","termid":"MONDO:0017688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0019254"],"is_obsolete":false,"name":"glycogen storage disease due to lactate dehydrogenase M-subunit deficiency","secondary_identifiers":["UMLS:C2931743","HGNC:6535","SCTID:237982007","MESH:C538133","OMIM:612933","GARD:3160","ICD9:271.8","MEDGEN:419152","NANDO:1200833","Orphanet:284426"],"synonyms":[{"name":"GSD 11","type":"related"},{"name":"GSD XI","type":"related"},{"name":"GSD due to lactate dehydrogenase M-subunit deficiency","type":"exact"},{"name":"GSD type 11","type":"related"},{"name":"GSD11","type":"related"},{"name":"LDH-M subunit deficiency","type":"exact"},{"name":"LDHA glycogen storage disease","type":"exact"},{"name":"glycogen storage disease XI","type":"related"},{"name":"glycogen storage disease caused by mutation in LDHA","type":"exact"},{"name":"glycogen storage disease type 11","type":"related"},{"name":"glycogenosis due to lactate dehydrogenase M-subunit deficiency","type":"exact"},{"name":"glycogenosis type 11","type":"related"},{"name":"lactate dehydrogenase A deficiency","type":"exact"},{"name":"lactate dehydrogenase deficiency type A","type":"related"}],"termid":"MONDO:0013047","xrefs":{"Monarch":{"xref_id":"0013047"}}}


id: PBO:0046451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamyl-prolyl-tRNA synthetase 1","termid":"PBO:0046451"}


id: MONDO:0000937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An encephalitis caused by infection with Treponema.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Treponema infectious disease","termid":"MONDO:0007000"},{"relation_name":"is_a","term_name":"infectious encephalitis","termid":"MONDO:0020067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syphilitic encephalitis","secondary_identifiers":["UMLS:C0153168","SCTID:26135000","DOID:10081","ICD9:094.81","MEDGEN:509177"],"synonyms":[{"name":"Treponema caused encephalitis","type":"exact"},{"name":"Treponema encephalitis","type":"exact"}],"termid":"MONDO:0000937","xrefs":{"Monarch":{"xref_id":"0000937"}}}


id: MONDO:0002439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete stress polycythemia (obsolete MONDO:0002439)","termid":"MONDO:0002439","xrefs":{"Monarch":{"xref_id":"0002439"}}}


id: PBO:0003191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine-repressible acid phosphatase Pho4","termid":"PBO:0003191"}


id: PBO:0048845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosamine-phosphate N-acetyltransferase 1","termid":"PBO:0048845"}


id: MONDO:0006059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the nasal cavity mucosa. Signs and symptoms include nasal fullness and obstruction, pain, epistaxis, and the presence of a nasal mass.","definition_xrefs":["NCIT:C8192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nasal cavity carcinoma","termid":"MONDO:0003212"},{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"nasal cavity squamous cell carcinoma","secondary_identifiers":["EFO:1000057","UMLS:C0280333","DOID:5515","MEDGEN:79104"],"synonyms":[{"name":"nasal cavity squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of nasal cavity","type":"exact"},{"name":"squamous cell carcinoma of the nasal cavity","type":"exact"}],"termid":"MONDO:0006059","xrefs":{"Monarch":{"xref_id":"0006059"}}}


id: PBO:0070256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U11 small nuclear","termid":"PBO:0070256"}


id: PBO:0109386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 17A","termid":"PBO:0109386"}


id: PBO:0058683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6811","termid":"PBO:0058683"}


id: PBO:0086588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; exhibits a two-hybrid interaction with Jsn1p in a large-scale analysis; YLR156W has a paralog, YLR159W, that arose from a segmental duplication","termid":"PBO:0086588"}


id: PBO:0040447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 10A (putative)","termid":"PBO:0040447"}


id: PATO:0001578
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A permeability which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"permeable","termid":"PATO:0000982"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased permeability","synonyms":[{"name":"low permeability","type":"exact"}],"termid":"PATO:0001578"}


id: PBO:0076145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUCLG2 pseudogene 4","termid":"PBO:0076145"}


id: PBO:0072546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 76","termid":"PBO:0072546"}


id: PBO:0041100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSCL2 lipid droplet biogenesis associated, seipin","termid":"PBO:0041100"}


id: PBO:0017445
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-produced_by","termid":"PBO:0017445"}


id: GO:0099548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse mediated by nitric oxide.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic signaling by nitric oxide","termid":"GO:0099163"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas","termid":"GO:0099543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling by nitric oxide","termid":"GO:0099548"}


id: PBO:0066175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB transcriptional corepressor like 1","termid":"PBO:0066175"}


id: GO:0061117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate or extent of heart growth. Heart growth is the increase in size or mass of the heart.","definition_xrefs":["GOC:hjd","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organ growth","termid":"GO:0046621"},{"relation_name":"is_a","term_name":"regulation of heart growth","termid":"GO:0060420"},{"relation_name":"negatively_regulates","term_name":"heart growth","termid":"GO:0060419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heart growth","termid":"GO:0061117"}


id: PBO:0038514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily E member 1","termid":"PBO:0038514"}


id: GO:0035731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a dinitrosyl-iron complex. Nitric oxide (NO) is stored as dinitrosyl-iron complexes, which form spontaneously from Glutathione (GSH), S-nitrosoglutathione, and trace amounts of ferrous ions, or by reaction of iron-sulfur centers with NO.","definition_xrefs":["PMID:10534443","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal cluster binding","termid":"GO:0051540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"dinitrosyl-iron complex binding","synonyms":[{"name":"DNDGIC binding","type":"exact"},{"name":"DNIC binding","type":"exact"},{"name":"dinitrosyl-diglutathionyl-iron complex binding","type":"exact"}],"termid":"GO:0035731"}


id: PBO:0069918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1210, pseudogene","termid":"PBO:0069918"}


id: GO:0097489
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the multivesicular body internal vesicle.","definition_xrefs":["GOC:pde","PMID:21183070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle lumen","termid":"GO:0031983"},{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"multivesicular body, internal vesicle","termid":"GO:0097487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005768","GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"multivesicular body, internal vesicle lumen","termid":"GO:0097489"}


id: PBO:0085432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyamine transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; recognizes spermine, putrescine, and spermidine; localizes to the plasma membrane","termid":"PBO:0085432"}


id: FYPO:0004629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic DNA replication is normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA replication","termid":"FYPO:0001133"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic DNA replication","synonyms":[{"name":"normal DNA replication during mitotic cell cycle","type":"exact"},{"name":"normal DNA replication during vegetative growth","type":"exact"}],"termid":"FYPO:0004629"}


id: FYPO:0004672
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, is elongated, and contains a nucleus that is broken into small fragments.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"fragmented nucleus during vegetative growth","termid":"FYPO:0001919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000004","FYPO:0001320","FYPO:0002403","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"inviable elongated vegetative cell with fragmented nucleus","synonyms":[{"name":"elongated inviable cell with fragmented nucleus","type":"exact"},{"name":"inviable elongated cell with fragmented nucleus during vegetative growth","type":"exact"},{"name":"inviable elongated vegetative cell with fragmented DNA","type":"related"},{"name":"inviable elongated vegetative cell with fragmented nucleus during mitotic cell cycle","type":"related"},{"name":"lethal; elongated vegetative cell with fragmented nucleus","type":"exact"}],"termid":"FYPO:0004672"}


id: MONDO:0010810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive form of rickets caused by inactivating mutation(s) in the CYP2R1 gene, encoding vitamin D 25-hydroxylase, the hepatic enzyme that converts vitamin D to 25-hydroxyvitamin D, the precursor of 1,25-dihydroxyvitamin D (calcitriol). The condition is characterized by reduced serum concentrations of 25-hydroxyvitamin D, hypophosphatemia, hypocalcemia with secondary hyperparathyroidism and elevated serum alkaline phosphatase, and by failure to thrive, seizures, muscle weakness, and rickets.","definition_xrefs":["NCIT:C131074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"vitamin D-dependent rickets, type 1","termid":"MONDO:0009924"},{"relation_name":"is_a","term_name":"steroid metabolism disease","termid":"MONDO:0045012"},{"relation_name":"is_a","term_name":"abnormal mineralization disorder","termid":"MONDO:0800096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"vitamin D hydroxylation-deficient rickets, type 1B","secondary_identifiers":["OMIM:600081","GARD:18415","MEDGEN:374020","MESH:C564005","UMLS:C1838657","DOID:0080887"],"synonyms":[{"name":"25-Hydroxyvitamin D3 deficiency, selective","type":"related"},{"name":"CYP2R1 vitamin D-dependent rickets, type 1","type":"exact"},{"name":"Pseudovitamin D3 deficiency rickets due to 25-Hydroxylase deficiency","type":"related"},{"name":"VDDR1B","type":"related"},{"name":"Vitam D hydroxylation-deficient rickets type 1b","type":"exact"},{"name":"rickets due to defect in vitamin D 25-hydroxylation deficiency","type":"exact"},{"name":"vitamin D 25-Hydroxylase deficiency","type":"exact"},{"name":"vitamin D hydroxylation-deficient rickets type 1b","type":"exact"},{"name":"vitamin D hydroxylation-deficient rickets, type 1B","type":"exact"},{"name":"vitamin D-dependent rickets, type 1 caused by mutation in CYP2R1","type":"exact"},{"name":"vitamin D-dependent rickets, type 1B","type":"related"}],"termid":"MONDO:0010810","xrefs":{"Monarch":{"xref_id":"0010810"}}}


id: PR:000050517
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SNF1-like protein kinase ssp2 (Schizosaccharomyces pombe) that has been phosphorylated at the position equivalent to Thr-189 of the amino acid sequence represented by UniProtKB:O74536. Example: UniProtKB:O74536, Thr-189, MOD:00047.","definition_xrefs":["PMID:22375066","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNF1-like protein kinase ssp2 (Schizosaccharomyces pombe)","termid":"PR:000050516"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ssp2/Phos(T189)","pombase_gene_id":"SPCC74.03c","synonyms":[{"name":"PomBase_original_PRO_term_name: SNF1-like protein kinase ssp2 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-ssp2/Phos:1","type":"exact"},{"name":"UniProtKB:O74536, Thr-189, MOD:00047","type":"narrow"},{"name":"ssp2/Phos(T189)","type":"exact"}],"termid":"PR:000050517"}


id: PBO:0064557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-mannose kinase","termid":"PBO:0064557"}


id: GO:0045832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of light-activated channel activity.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of light-activated channel activity (obsolete GO:0045832)","synonyms":[{"name":"activation of light-activated channel activity","type":"narrow"},{"name":"stimulation of light-activated channel activity","type":"narrow"},{"name":"up regulation of light-activated channel activity","type":"exact"},{"name":"up-regulation of light-activated channel activity","type":"exact"},{"name":"upregulation of light-activated channel activity","type":"exact"}],"termid":"GO:0045832"}


id: PBO:0055266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2693","termid":"PBO:0055266"}


id: MONDO:0018405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of rare male infertility due to hypothalamic-pituitary-gonadal axis disorder that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"gene_count":0,"genotype_count":0,"name":"obsolete rare male infertility due to hypothalamic-pituitary-gonadal axis disorder of genetic origin (obsolete MONDO:0018405)","secondary_identifiers":["Orphanet:399983"],"synonyms":[{"name":"genetic rare male infertility due to hypothalamic-pituitary-gonadal axis disorder","type":"exact"},{"name":"rare male infertility due to gonadotropic axis disorder of genetic origin","type":"exact"},{"name":"rare male infertility due to hypothalamic-pituitary-testicular axis disorder of genetic origin","type":"exact"}],"termid":"MONDO:0018405","xrefs":{"Monarch":{"xref_id":"0018405"}}}


id: PBO:0049512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 19","termid":"PBO:0049512"}


id: FYECO:0000061
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which a xenobiotic substrate was added to the medium or assay buffer in excess compared to standard medium or assay buffers. A xenobiotic substrate is a macromolecular substrate which is not synthesised by S. pombe.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ xenobiotic substrate","termid":"FYECO:0000061"}


id: GO:0046117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of queuosines, any of a series of nucleosides found in tRNA and having an additional pentenyl ring added via an NH group to the methyl group of 7-methylguanosine. The pentenyl ring may carry other substituents.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete queuosine catabolic process (obsolete GO:0046117)","synonyms":[{"name":"queuosine breakdown","type":"exact"},{"name":"queuosine catabolism","type":"exact"},{"name":"queuosine degradation","type":"exact"}],"termid":"GO:0046117"}


id: GO:0018850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-chloro-2,5-dihydro-5-oxofuran-2-acetate = 3-chloro-cis,cis-muconate.","definition_xrefs":["EC:5.5.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"chloromuconate cycloisomerase activity","secondary_identifiers":["RHEA:11032"],"synonyms":[{"name":"2-chloro-2,5-dihydro-5-oxofuran-2-acetate lyase (decyclizing)","type":"related"},{"name":"muconate cycloisomerase II activity","type":"related"}],"termid":"GO:0018850"}


id: PBO:0081664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 586","termid":"PBO:0081664"}


id: GO:0035684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a helper T cell from the blood vessels into the surrounding tissue. A helper T-cell is an effector T cell that provides help in the form of secreted cytokines to other immune cells.","definition_xrefs":["GOC:BHF","CL:0000912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell extravasation","termid":"GO:0072683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"helper T cell extravasation","synonyms":[{"name":"T-helper cell extravasation","type":"exact"},{"name":"helper T-cell extravasation","type":"exact"}],"termid":"GO:0035684"}


id: PBO:0064505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II, I and III subunit F","termid":"PBO:0064505"}


id: MONDO:0004286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually slow-growing epithelial neoplasm with ductal differentiation that arises from the exocrine pancreas and grows mostly within the pancreatic ducts. Grossly, it is characterized by the presence of intraductal masses. Morphologically, there is proliferation of mucin-producing cells within the pancreatic ducts, intraductal accumulation of mucin, and a papillary growth pattern. It may be associated with the presence of an invasive carcinoma. It usually occurs in older patients. Signs and symptoms include epigastric pain, weight loss, jaundice, chronic pancreatitis, and diabetes mellitus.","definition_xrefs":["NCIT:C38342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant exocrine pancreas neoplasm","termid":"MONDO:0002116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"pancreatic intraductal papillary-mucinous neoplasm","secondary_identifiers":["DOID:7575","ONCOTREE:IPMN","UMLS:C4511687","MEDGEN:1373306"],"synonyms":[{"name":"IPMN","type":"exact"},{"name":"intraductal papillary mucinous neoplasm","type":"related"},{"name":"pancreatic IPMN","type":"exact"},{"name":"pancreatic intraductal papillary-mucinous neoplasm","type":"exact"},{"name":"pancreatic intraductal papillary-mucinous tumor","type":"exact"},{"name":"pancreatic intraductal papillary-mucinous tumour","type":"exact"}],"termid":"MONDO:0004286","xrefs":{"Monarch":{"xref_id":"0004286"}}}


id: PBO:0074394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 3","termid":"PBO:0074394"}


id: FYPO:0002541
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to nucleoplasm","synonyms":[{"name":"increased protein localisation to nucleoplasm","type":"exact"},{"name":"increased protein localization to nucleoplasm during mitotic cell cycle","type":"related"},{"name":"increased protein localization to nucleoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0002541"}


id: PBO:0044603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 8 like 2","termid":"PBO:0044603"}


id: FYPO:0003795
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of alpha-D-glucan measured in the cell wall is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal alpha-glucan level","termid":"FYPO:0001196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal cell wall alpha-glucan level","synonyms":[{"name":"normal cell wall alpha-D-glucan level","type":"exact"},{"name":"normal cell wall alpha-glucan accumulation","type":"related"},{"name":"normal cell wall alpha-glucan level during mitotic cell cycle","type":"related"},{"name":"normal cell wall alpha-glucan level during vegetative growth","type":"exact"}],"termid":"FYPO:0003795"}


id: MOD:00558
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["Unimod:207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrolein addition +38","synonyms":[{"name":"Acrolein addition +38","type":"related"},{"name":"Delta:H(2)C(3)","type":"related"}],"termid":"MOD:00558"}


id: PBO:0026864
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-unequal_mitotic_sister_chromatid_segregation_following_normal_mitosis","termid":"PBO:0026864"}


id: SO:0002224
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that codes for a 2A self-cleaving polypeptide region, which is a region that can result in a break in the peptide sequence at its terminal G-P junction.","definition_xrefs":["PMID:22301656","PMID:28526819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"2A_self_cleaving_peptide_region","synonyms":[{"name":"2A polypeptide region","type":"related"},{"name":"2A self-cleaving polypeptide region","type":"related"}],"termid":"SO:0002224"}


id: PBO:0064616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 5 homeobox 1 pseudogene 6","termid":"PBO:0064616"}


id: PBO:0045635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 47 (pseudogene)","termid":"PBO:0045635"}


id: PR:Q874R3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anaphase-promoting complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03086","PANTHER:PTHR11932:SF5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.04","secondary_identifiers":["UniProtKB:Q874R3"],"synonyms":[{"name":"20S cyclosome/APC complex protein apc2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ANAPC2","type":"exact"}],"termid":"PR:Q874R3"}


id: PBO:0116307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospho-2-dehydro-3-deoxyheptonate aldolase Aro4","termid":"PBO:0116307"}


id: PBO:0043317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin interactor 1","termid":"PBO:0043317"}


id: GO:0051235
data:
  {"annotated_genes":["SJAG_00368","SJAG_00030","SJAG_00053","SJAG_03850","SJAG_00661","SJAG_01017","SJAG_01738","SJAG_01116","SJAG_04221","SJAG_01001","SJAG_03170"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92281,59710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051685"},{"annotations":[68191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032065"},{"annotations":[106597,102100,112842,95907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097248"},{"annotations":[94014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006621"},{"annotations":[110636],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0061454"},{"annotations":[108983,117204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"}]},"cv_name":"biological_process","definition":"Any process in which a cell, substance or cellular entity, such as a protein complex or organelle, is maintained in a location and prevented from moving elsewhere.","definition_xrefs":["GOC:ai","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization","termid":"GO:0051179"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00053":null,"SJAG_00368":null,"SJAG_00661":null,"SJAG_01001":null,"SJAG_01017":null,"SJAG_01116":null,"SJAG_01738":null,"SJAG_03170":null,"SJAG_03850":null,"SJAG_04221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of location","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"maintenance of localization","type":"exact"},{"name":"retention","type":"narrow"},{"name":"sequestering","type":"narrow"},{"name":"storage","type":"narrow"}],"termid":"GO:0051235","terms_by_termid":{"GO:0006621":null,"GO:0032065":null,"GO:0051685":null,"GO:0061454":null,"GO:0097248":null,"GO:1990854":null}}


id: PBO:0062112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 11","termid":"PBO:0062112"}


id: PBO:0053684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 871","termid":"PBO:0053684"}


id: PBO:0038369
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_regulatory_component_activity","termid":"PBO:0038369"}


id: PBO:0034748
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AlkylTransferase-Like","termid":"PBO:0034748"}


id: MONDO:0014149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fetal akinesia-cerebral and retinal hemorrhage syndrome is a rare, lethal, congenital myopathy syndrome characterized by decreased fetal movements and polyhydraminos in utero and the presence of akinesia, severe hypotonia with respiratory insufficiency, absent reflexes, joint contractures, skeletal abnormalities with thin ribs and bones, intracranial and retinal hemorrhages and decreased birth weight in the neonate.","definition_xrefs":["Orphanet:363409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lethal congenital contracture syndrome","termid":"MONDO:0017436"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"fetal akinesia-cerebral and retinal hemorrhage syndrome","secondary_identifiers":["OMIM:615368","UMLS:C4706410","GARD:17553","MEDGEN:1631944","SCTID:763346009"],"synonyms":[{"name":"LCCS5","type":"related"},{"name":"lethal congenital contracture syndrome 5","type":"related"},{"name":"lethal congenital contracture syndrome type 5","type":"exact"},{"name":"myopathy, centronuclear, lethal, autosomal recessive","type":"related"}],"termid":"MONDO:0014149","xrefs":{"Monarch":{"xref_id":"0014149"}}}


id: GO:0018764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-isopropylammelide + H2O = cyanuric acid + isopropylamine.","definition_xrefs":["EC:3.5.4.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"N-isopropylammelide isopropylaminohydrolase activity","secondary_identifiers":["UM-BBD_enzymeID:r0115","MetaCyc:R123-RXN","RHEA:23608"],"synonyms":[{"name":"AtzC","type":"related"}],"termid":"GO:0018764"}


id: GO:0051554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving flavonols, a member of a class of vascular pigments formed by consecutive oxidative processes from the flavonoid intermediates flavanones and dihydroflavonols. Flavonols are the most widespread of the flavonoids and have a wide array of physiological activities.","definition_xrefs":["PMID:11402179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavone metabolic process","termid":"GO:0051552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavonol metabolic process","synonyms":[{"name":"flavonol metabolism","type":"exact"}],"termid":"GO:0051554"}


id: FYPO:0001521
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glutathione (GSH) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular glutathione level during vegetative growth","synonyms":[{"name":"increased cellular GSH level during vegetative growth","type":"exact"},{"name":"increased cellular L-gamma-glutamyl-L-cysteinylglycine level during vegetative growth","type":"exact"},{"name":"increased cellular glutathione level during mitotic cell cycle","type":"related"},{"name":"increased cellular reduced glutathione level during vegetative growth","type":"exact"},{"name":"increased glutathione accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0001521"}


id: PBO:0067189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 251, pseudogene","termid":"PBO:0067189"}


id: MONDO:0054695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"centronuclear myopathy","termid":"MONDO:0018947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, centronuclear, 6, with fiber-type disproportion","secondary_identifiers":["UMLS:C4540345","DOID:0111221","OMIM:617760","GARD:16250","MEDGEN:1627492"],"synonyms":[{"name":"CNM6","type":"related"},{"name":"centronuclear myopathy 6 with fiber-type disproportion","type":"exact"},{"name":"myopathy, centronuclear, 6, with FIBER-type disproportion","type":"related"},{"name":"myopathy, centronuclear, 6, with fiber-type disproportion","type":"exact"}],"termid":"MONDO:0054695","xrefs":{"Monarch":{"xref_id":"0054695"}}}


id: PBO:0047172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 5","termid":"PBO:0047172"}


id: MONDO:0003666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma that arises from the fallopian tube and resembles the endometrioid adenocarcinoma of the uterus. It usually has a favorable prognosis.","definition_xrefs":["NCIT:C6279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fallopian tube adenocarcinoma","termid":"MONDO:0002746"},{"relation_name":"is_a","term_name":"endometrioid adenocarcinoma","termid":"MONDO:0005026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fallopian tube endometrioid adenocarcinoma","secondary_identifiers":["MEDGEN:232185","NCIT:C40111","DOID:5831","UMLS:C1333592"],"synonyms":[{"name":"endometrioid adenocarcinoma of fallopian tube","type":"exact"},{"name":"endometrioid adenocarcinoma of the fallopian tube","type":"exact"},{"name":"endometrioid carcinoma of fallopian tube","type":"exact"},{"name":"endometrioid carcinoma of the fallopian tube","type":"exact"},{"name":"fallopian tube endometrioid adenocarcinoma","type":"exact"},{"name":"fallopian tube endometrioid cancer","type":"exact"},{"name":"fallopian tube endometrioid carcinoma","type":"exact"},{"name":"fallopian tube endometrioid neoplasm","type":"related"}],"termid":"MONDO:0003666","xrefs":{"Monarch":{"xref_id":"0003666"}}}


id: PBO:0078760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase subunit 11-2 pseudogene 3","termid":"PBO:0078760"}


id: GO:0014710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of somitomeric trunk muscle development. The somitomeric trunk muscle is derived from somitomeric mesoderm. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of somitomeric trunk muscle development","termid":"GO:0014708"},{"relation_name":"is_a","term_name":"negative regulation of muscle organ development","termid":"GO:0048635"},{"relation_name":"negatively_regulates","term_name":"somitomeric trunk muscle development","termid":"GO:0002075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of somitomeric trunk muscle development","termid":"GO:0014710"}


id: FYPO:0001810
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of guanine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal guanine import","termid":"FYPO:0001809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased guanine import","synonyms":[{"name":"decreased guanine import across plasma membrane","type":"exact"},{"name":"decreased guanine import during mitotic cell cycle","type":"related"},{"name":"decreased guanine import during vegetative growth","type":"exact"},{"name":"decreased guanine import into cell","type":"exact"},{"name":"decreased guanine uptake","type":"exact"},{"name":"reduced guanine import","type":"exact"}],"termid":"FYPO:0001810"}


id: PBO:0063214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCCA divergent transcript","termid":"PBO:0063214"}


id: FYPO:0000811
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which peroxisome organization is abnormal. Peroxisome organization results in the assembly, arrangement of constituent parts, or disassembly of a peroxisome.","definition_xrefs":["PomBase:mah","GO:0007031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal peroxisome organization","synonyms":[{"name":"abnormal peroxisome organisation","type":"exact"},{"name":"abnormal peroxisome organization during mitotic cell cycle","type":"related"},{"name":"abnormal peroxisome organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000811"}


id: GO:1902262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that is involved in blood vessel morphogenesis.","definition_xrefs":["GOC:TermGenie","GOC:mtg_apoptosis","PMID:16163358","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"},{"relation_name":"part_of","term_name":"blood vessel morphogenesis","termid":"GO:0048514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in blood vessel morphogenesis","synonyms":[{"name":"apoptosis involved in patterning of blood vessels","type":"narrow"},{"name":"apoptotic cell death involved in patterning of blood vessels","type":"exact"},{"name":"apoptotic program involved in patterning of blood vessels","type":"narrow"},{"name":"apoptotic programmed cell death involved in patterning of blood vessels","type":"exact"},{"name":"programmed cell death by apoptosis involved in patterning of blood vessels","type":"exact"},{"name":"signaling (initiator) caspase activity involved in patterning of blood vessels","type":"related"},{"name":"type I programmed cell death involved in patterning of blood vessels","type":"narrow"}],"termid":"GO:1902262"}


id: PBO:0070997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 21","termid":"PBO:0070997"}


id: MONDO:0014768
data:
  {"annotated_genes":["SJAG_00737","SJAG_03258"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87754,87755],"is_not":false,"summary":null,"term":"MONDO:0014768"},{"annotations":[87894,87893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010829"}]},"cv_name":"mondo","definition":"Any CADASIL in which the cause of the disease is a mutation in the HTRA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral arteriopathy with subcortical infarcts and leukoencephalopathy","termid":"MONDO:0007432"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_03258":null},"genotype_count":0,"is_obsolete":false,"name":"cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy, type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111036","OMIM:616779","UMLS:C4225211","MEDGEN:895965"],"synonyms":[{"name":"CADASIL 2","type":"exact"},{"name":"CADASIL caused by mutation in HTRA1","type":"exact"},{"name":"CADASIL type 2","type":"exact"},{"name":"CADASIL2","type":"exact"},{"name":"HTRA1 CADASIL","type":"exact"},{"name":"autosomal dominant cerebral arteriopathy with subcortical infarcts and leukoencephalopathy type 2","type":"exact"},{"name":"cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy, type 2","type":"exact"}],"termid":"MONDO:0014768","terms_by_termid":{"MONDO:0010829":null,"MONDO:0014768":null},"xrefs":{"Monarch":{"xref_id":"0014768"}}}


id: SO:0000554
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000554 assortment_derived_deficiency_plus_duplication (obsolete SO:0000554)","termid":"SO:0000554"}


id: GO:0043846
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heptamer that includes the tau and gamma products of the dnaX gene and the chi/psi subcomplex. Confers structural asymmetry that allows the polymerase to replicate both leading and lagging strands.","definition_xrefs":["PMID:12940977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"DNA polymerase III complex","termid":"GO:0009360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DNA polymerase III, clamp loader complex","synonyms":[{"name":"DNA polymerase III, DnaX complex","type":"exact"},{"name":"DNA polymerase III, DnaX subcomplex","type":"exact"},{"name":"clamp loader complex","type":"broad"}],"termid":"GO:0043846"}


id: GO:0071898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of estrogen receptor binding, interacting selectively with a an estrogen receptor.","definition_xrefs":["GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of estrogen receptor binding (obsolete GO:0071898)","termid":"GO:0071898"}


id: PBO:0053261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIF antisense RNA 2","termid":"PBO:0053261"}


id: GO:0055068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of cobalt ions within an organism or cell.","definition_xrefs":["GOC:mah","GOC:ai","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete cobalt ion homeostasis (obsolete GO:0055068)","synonyms":[{"name":"cobalt homeostasis","type":"broad"}],"termid":"GO:0055068"}


id: PBO:0047796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXG1 antisense RNA 1","termid":"PBO:0047796"}


id: PBO:0028790
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_methylation_at_centromere_outer_repeat","termid":"PBO:0028790"}


id: GO:0090612
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclic adenosine monophosphate + H2O = cyclic inosine monophosphate + NH3.","definition_xrefs":["PMID:24074367","RHEA:22908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"cAMP deaminase activity","secondary_identifiers":["EC:3.5.4.46"],"synonyms":[{"name":"cyclic adenosine monophosphate deaminase activity","type":"exact"}],"termid":"GO:0090612"}


id: MONDO:0004951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The type species of lentivirus and the etiologic agent of acquired immunodeficiency syndrome (AIDS). It is characterized by its cytopathic effect and affinity for the T4-lymphocyte.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"susceptibility to HIV infection","secondary_identifiers":["MEDGEN:332156","UMLS:C1836230","NCIT:C14220","OMIM:609423"],"synonyms":[{"name":"AIDS, delayed/rapid progression to","type":"exact"},{"name":"AIDS, progression to","type":"related"},{"name":"AIDS, rapid progression to","type":"exact"},{"name":"AIDS, resistance to","type":"exact"},{"name":"AIDS, slow progression to","type":"exact"},{"name":"HIV infection, resistance to","type":"exact"},{"name":"HIV type 1, susceptibility to","type":"exact"},{"name":"HIV-1 disease, delayed progression of","type":"exact"},{"name":"HIV-1 disease, rapid progression of","type":"exact"},{"name":"HIV-1 viremia, susceptibility to","type":"exact"},{"name":"HIV-1, resistance to","type":"related"},{"name":"HIV-1, susceptibility to","type":"related"},{"name":"HIV/AIDS, susceptibility to","type":"exact"},{"name":"HIV1 infection, resistance to","type":"exact"},{"name":"HIV1, resistance to","type":"exact"},{"name":"acquired immunodeficiency syndrome, progression to","type":"related"},{"name":"human immunodeficiency virus type 1, resistance to","type":"related"},{"name":"human immunodeficiency virus type 1, susceptibility to","type":"related"},{"name":"rapid progression to AIDS from HIV1 infection","type":"exact"}],"termid":"MONDO:0004951","xrefs":{"Monarch":{"xref_id":"0004951"}}}


id: PBO:0063445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 7A","termid":"PBO:0063445"}


id: MONDO:0010270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syndromic X-linked intellectual disability 7, also called MRXS7, is characterized by X-linked intellectual deficit, obesity, hypogonadism, and tapering fingers.","definition_xrefs":["Orphanet:85274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"syndromic X-linked intellectual disability 7","secondary_identifiers":["SCTID:719160009","MEDGEN:337403","DOID:0060808","OMIM:300218","MESH:C537449","UMLS:C1846170","GARD:9156"],"synonyms":[{"name":"Ahmad X-linked intellectual disability syndrome","type":"related"},{"name":"Ahmad X-linked mental retardation syndrome","type":"related"},{"name":"MRXS7","type":"exact"},{"name":"X-linked intellectual disability, Ahmad type","type":"exact"},{"name":"intellectual disability X-linked syndromic 7","type":"related"},{"name":"intellectual disability, X-linked syndromic 7","type":"exact"},{"name":"intellectual disability, X-linked, syndromic 7","type":"related"},{"name":"intellectual disability, obesity, hypogonadism, and tapering fingers","type":"related"},{"name":"mental retardation X-linked syndromic 7","type":"related"},{"name":"mental retardation, X-linked syndromic 7","type":"exact"},{"name":"mental retardation, X-linked, syndromic 7","type":"related"},{"name":"mental retardation, obesity, hypogonadism, and tapering fingers","type":"related"},{"name":"syndromic X-linked intellectual disability type 7","type":"exact"}],"termid":"MONDO:0010270","xrefs":{"Monarch":{"xref_id":"0010270"}}}


id: PBO:0012037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA 2'-O-methyltransferase activity (predicted)","termid":"PBO:0012037"}


id: MONDO:0005357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare transmittable degenerative disorder of the brain caused by prions. Morphologically it is characterized by spongiform degeneration of the cerebral and cerebellar cortex. Signs and symptoms include sleep disturbances, personality changes, aphasia, ataxia, muscle atrophy and weakness, visual loss, and myoclonus. It usually leads to death within a year from the onset of the disease.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prion disease","termid":"MONDO:0005429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Creutzfeldt Jacob disease","secondary_identifiers":["NCIT:C26802","ICD9:046.19","NORD:1014","ICD9:046.1","MESH:D007562","UMLS:C0022336","DOID:11949","MEDGEN:7179","EFO:0004226","SCTID:792004"],"synonyms":[{"name":"CJD","type":"exact"},{"name":"CJD (Creutzfeldt Jakob disease)","type":"exact"},{"name":"Creutzfeldt Jacob syndrome","type":"exact"},{"name":"Creutzfeldt Jakob Disease","type":"exact"},{"name":"Creutzfeldt Jakob disease","type":"exact"},{"name":"Creutzfeldt-Jacob disease","type":"exact"},{"name":"Creutzfeldt-Jakob disease","type":"related"},{"name":"Jakob-Creutzfeldt disease","type":"exact"},{"name":"Subacute spongiform encephalopathy","type":"exact"},{"name":"classic Creutzfeldt-Jakob disease","type":"exact"},{"name":"transmissible virus dementia","type":"exact"}],"termid":"MONDO:0005357","xrefs":{"Monarch":{"xref_id":"0005357"}}}


id: MONDO:0003830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromophil adenoma of the kidney","termid":"MONDO:0003829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"type 1 papillary adenoma of the kidney","secondary_identifiers":["NCIT:C39809","DOID:6258","UMLS:C1519706","MEDGEN:276906"],"synonyms":[{"name":"type 1 papillary adenoma of the kidney","type":"exact"},{"name":"type 1 renal papillary adenoma","type":"exact"}],"termid":"MONDO:0003830","xrefs":{"Monarch":{"xref_id":"0003830"}}}


id: PATO:0001330
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A flavor quality inhering in a bearer by virtue of the bearer's lacking flavour.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavor","termid":"PATO:0000043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavourless","termid":"PATO:0001330"}


id: GO:0000804
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The sex chromosome present in females of species in which the female is the heterogametic sex; generally, the sex chromosome that pairs with the Z chromosome in the heterogametic sex. The W chromosome is absent from the cells of males and present in one copy in the somatic cells of females.","definition_xrefs":["GOC:mr","GOC:mah","PMID:20622855","ISBN:0321000382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex chromosome","termid":"GO:0000803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"W chromosome","secondary_identifiers":["Wikipedia:ZW_sex-determination_system"],"termid":"GO:0000804"}


id: PBO:0075864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family pseudogene 4","termid":"PBO:0075864"}


id: GO:1905217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an astaxanthin stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:22309505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to astaxanthin","synonyms":[{"name":"response to (3S,3'S)-3,3'-dihydroxy-beta,beta-carotene-4,4'-dione","type":"exact"}],"termid":"GO:1905217"}


id: GO:0060676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the ureteric bud from the Wolffian duct. This process begins when the bud protrudes from the duct and ends when it is a recognizable bud.","definition_xrefs":["GOC:dph","PMID:16916378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule formation","termid":"GO:0072172"},{"relation_name":"part_of","term_name":"ureteric bud morphogenesis","termid":"GO:0060675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureteric bud formation","secondary_identifiers":["Reactome:R-HSA-9830674"],"termid":"GO:0060676"}


id: MONDO:0010247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A peroxisomal disease characterized by severe inflammatory demyelination in the brain, and often associated with adrenal insufficiency.","definition_xrefs":["Orphanet:139396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenoleukodystrophy","termid":"MONDO:0018544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"X-linked cerebral adrenoleukodystrophy","secondary_identifiers":["NANDO:1200166","NANDO:2201246","UMLS:C2026514","GARD:9412","icd11.foundation:1105019687","MEDGEN:1708324"],"synonyms":[{"name":"ALD","type":"related"},{"name":"ALD childhood cerebral form","type":"related"},{"name":"Addison disease and cerebral sclerosis","type":"related"},{"name":"Siemerling-Creutzfeldt disease","type":"related"},{"name":"X-linked cerebral adrenoleukodystrophy","type":"exact"},{"name":"adrenoleukodystrophy","type":"related"},{"name":"adrenoleukodystrophy X-linked cerebral form","type":"related"},{"name":"adrenoleukodystrophy childhood cerebral form","type":"related"},{"name":"adrenomyeloneuropathy","type":"related"},{"name":"bronze Schilder disease","type":"related"},{"name":"childhood cerebral ALD","type":"related"},{"name":"childhood-onset cerebral X-linked adrenoleukodystrophy","type":"related"},{"name":"melanodermic leukodystrophy","type":"related"}],"termid":"MONDO:0010247","xrefs":{"Monarch":{"xref_id":"0010247"}}}


id: GO:1903774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of viral budding via host ESCRT complex.","definition_xrefs":["GO_REF:0000058","GOC:als","GOC:TermGenie","PMID:24878737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral budding via host ESCRT complex","termid":"GO:1903772"},{"relation_name":"is_a","term_name":"positive regulation of viral life cycle","termid":"GO:1903902"},{"relation_name":"positively_regulates","term_name":"viral budding via host ESCRT complex","termid":"GO:0039702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of viral budding via host ESCRT complex","synonyms":[{"name":"activation of viral budding through the ESCRT machinery","type":"related"},{"name":"activation of viral budding via host ESCRT complex","type":"narrow"},{"name":"positive regulation of viral budding through the ESCRT machinery","type":"related"},{"name":"up regulation of viral budding through the ESCRT machinery","type":"related"},{"name":"up regulation of viral budding via host ESCRT complex","type":"exact"},{"name":"up-regulation of viral budding through the ESCRT machinery","type":"related"},{"name":"up-regulation of viral budding via host ESCRT complex","type":"exact"},{"name":"upregulation of viral budding through the ESCRT machinery","type":"related"},{"name":"upregulation of viral budding via host ESCRT complex","type":"exact"}],"termid":"GO:1903774"}


id: PBO:0066423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retention in endoplasmic reticulum sorting receptor 1","termid":"PBO:0066423"}


id: PBO:0088966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-L ortholog Fta1","termid":"PBO:0088966"}


id: PBO:0084050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein for Gpa1p; regulates desensitization to alpha factor pheromone; also required to prevent receptor-independent signaling of the mating pathway; member of the RGS (regulator of G-protein signaling) family","termid":"PBO:0084050"}


id: PBO:0084547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the PUF protein family; PUF family is defined by the presence of Pumilio homology domains that confer RNA binding activity; preferentially binds mRNAs encoding nucleolar ribosomal RNA-processing factors","termid":"PBO:0084547"}


id: PR:000027596
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.3 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PMID:11242054","PomBase:MAH","PMID:20929775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.3","termid":"PR:000027595"},{"relation_name":"is_a","term_name":"core histone (Schizosaccharomyces pombe)","termid":"PR:000041293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"Spom-hht3","type":"exact"}],"termid":"PR:000027596"}


id: PBO:0042724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENPB DNA-binding domains containing 2, pseudogene","termid":"PBO:0042724"}


id: PBO:0088852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar aminopeptidase Lap2","termid":"PBO:0088852"}


id: FYPO:0004218
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 20 of histone H4 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone methylation during vegetative growth","termid":"FYPO:0002565"},{"relation_name":"is_a","term_name":"abnormal histone H4-K20 methylation during vegetative growth","termid":"FYPO:0004215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"abolished histone H4-K20 trimethylation during vegetative growth","synonyms":[{"name":"abolished histone H4 K20 trimethylation during vegetative growth","type":"exact"},{"name":"abolished histone H4-K20 trimethylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H4K20me3 during vegetative growth","type":"exact"},{"name":"abolished histone lysine H4 K20 trimethylation during vegetative growth","type":"exact"},{"name":"histone H4-K20 trimethylation abolished during vegetative growth","type":"exact"},{"name":"histone H4-K20 trimethylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0004218"}


id: FYPO:0003265
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity increases normally (i.e. as in wild type) as a result of a heat stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal alpha,alpha-trehalase activity","termid":"FYPO:0001480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal alpha,alpha-trehalase activity increase during cellular response to heat stress","synonyms":[{"name":"normal increase in trehalase activity in response to heat stress","type":"exact"},{"name":"normal neutral trehalase activity increase during cellular response to heat stress","type":"exact"},{"name":"normal trehalase activity increase during cellular response to heat stress","type":"broad"}],"termid":"FYPO:0003265"}


id: GO:0035779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of an angioblast cell. Angioblasts are one of the two products formed from hemangioblast cells (the other being pluripotent hemopoietic stem cells).","definition_xrefs":["CL:0000566","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell differentiation","termid":"GO:0048863"},{"relation_name":"part_of","term_name":"blood vessel development","termid":"GO:0001568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angioblast cell differentiation","synonyms":[{"name":"angioblastic mesenchymal cell differentiation","type":"exact"}],"termid":"GO:0035779"}


id: PR:Q09863
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nst1 gene.","definition_xrefs":["UniProtKB:Q09863","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress response protein nst1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.10c","synonyms":[{"name":"Spom972h-nst1","type":"exact"}],"termid":"PR:Q09863"}


id: PBO:0090855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil phosphoribosyltransferase Uck2","termid":"PBO:0090855"}


id: FYPO:0007813
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing stavudine.","definition_xrefs":["PomBase:mah","PMID:34108240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000257","FYPO:0002057","FYPO:0002060","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on stavudine","synonyms":[{"name":"normal cell population growth in presence of stavudine","type":"exact"},{"name":"normal cell population growth on stavudine","type":"exact"},{"name":"normal vegetative cell population growth on stavudine","type":"exact"}],"termid":"FYPO:0007813"}


id: PBO:0050549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparanase","termid":"PBO:0050549"}


id: GO:0044785
data:
  {"annotated_genes":["SJAG_03327","SJAG_01837","SJAG_01330","SJAG_00666","SJAG_01082","SJAG_04853","SJAG_01515","SJAG_00145","SJAG_04126","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108271,116496],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905318"},{"annotations":[77147,118675],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0033316"},{"annotations":[102062,100605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990949"},{"annotations":[102063,104221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990950"},{"annotations":[100606],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902103"},{"annotations":[115782],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[97062],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905191"},{"annotations":[103269],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"The cell cycle process in which a cell progresses from metaphase to anaphase as part of meiosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle phase transition","termid":"GO:0044771"},{"relation_name":"is_a","term_name":"metaphase/anaphase transition of cell cycle","termid":"GO:0044784"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00666":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01837":null,"SJAG_03327":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"metaphase/anaphase transition of meiotic cell cycle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"meiotic metaphase/anaphase transition","type":"exact"}],"termid":"GO:0044785","terms_by_termid":{"GO:0033316":null,"GO:1902103":null,"GO:1905191":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1990949":null,"GO:1990950":null}}


id: PATO:0001886
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue the bearer's disposition to having an affinity for water; it is readily absorbing or dissolving in water.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrophilicity","termid":"PATO:0001886"}


id: MONDO:0006201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoid cystic carcinoma that affects the ethmoid sinus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethmoid sinus cancer","termid":"MONDO:0001763"},{"relation_name":"is_a","term_name":"paranasal sinus adenoid cystic carcinoma","termid":"MONDO:0006352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ethmoid sinus adenoid cystic carcinoma","secondary_identifiers":["MEDGEN:232471","UMLS:C1333473","EFO:1000246","NCIT:C6238","DOID:2764"],"synonyms":[{"name":"adenoid cystic carcinoma of ethmoid sinus","type":"related"},{"name":"adenoid cystic carcinoma of the ethmoid sinus","type":"exact"}],"termid":"MONDO:0006201","xrefs":{"Monarch":{"xref_id":"0006201"}}}


id: MONDO:0017359
data:
  {"annotated_genes":["SJAG_03258","SJAG_02641","SJAG_00737","SJAG_03560","SJAG_01597"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009787"},{"annotations":[87173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012435"},{"annotations":[88855,88854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044723"},{"annotations":[87112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044724"}]},"cv_name":"mondo","definition":"A group of five inherited disorders caused by mutations in the AUH, DNAJC19, OPA3, and TAZ genes. The disorders are characterized by impairment in the function of mitochondria, resulting in the accumulation and excretion of 3-methylglutaconic acid, and the presence of 3-methylglutaric acid in the urine.","definition_xrefs":["NCIT:C98678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_01597":null,"SJAG_02641":null,"SJAG_03258":null,"SJAG_03560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"3-methylglutaconic aciduria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1008261602","MEDGEN:777186","MESH:C579867","DOID:0060336","NANDO:1200989","NANDO:2200496","GARD:12966","Orphanet:289902","OMIMPS:250950","SCTID:237950009","ICD10CM:E71.111","UMLS:C3696376"],"termid":"MONDO:0017359","terms_by_termid":{"MONDO:0009787":null,"MONDO:0012435":null,"MONDO:0044723":null,"MONDO:0044724":null},"xrefs":{"Monarch":{"xref_id":"0017359"}}}


id: FYPO:0005943
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which chromosomal translocation that would result in the loss of one of two different alleles of a gene occurs to a lower extent than normal.","definition_xrefs":["PMID:19798055","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased break-induced loss of heterozygosity","termid":"FYPO:0005451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased break-induced loss of heterozygosity via chromosomal translocation","synonyms":[{"name":"decreased break-induced loss of heterozygosity via chromosomal translocation during mitotic cell cycle","type":"related"},{"name":"decreased break-induced loss of heterozygosity via chromosomal translocation during vegetative growth","type":"exact"},{"name":"reduced break-induced loss of heterozygosity via chromosomal translocation","type":"exact"}],"termid":"FYPO:0005943"}


id: PBO:0055596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3032","termid":"PBO:0055596"}


id: PBO:0039633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amine oxidase copper containing 1","termid":"PBO:0039633"}


id: MONDO:0016198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative protein defects in neuromuscular diseases","termid":"MONDO:0016139"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of plectin","secondary_identifiers":["UMLS:C5680835","MEDGEN:1842345","Orphanet:209196","GARD:20437"],"termid":"MONDO:0016198","xrefs":{"Monarch":{"xref_id":"0016198"}}}


id: PBO:0062406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 31 pseudogene","termid":"PBO:0062406"}


id: GO:0047798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + cyclomaltodextrin = linear maltodextrin.","definition_xrefs":["EC:3.2.1.54","MetaCyc:CYCLOMALTODEXTRINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"cyclomaltodextrinase activity","secondary_identifiers":["RHEA:23980"],"synonyms":[{"name":"cyclodextrinase activity","type":"related"},{"name":"cycloheptaglucanase activity","type":"related"},{"name":"cyclohexaglucanase activity","type":"related"},{"name":"cyclomaltodextrin dextrin-hydrolase (decyclizing)","type":"related"}],"termid":"GO:0047798"}


id: MONDO:0006465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thyroid gland oncocytic follicular carcinoma (obsolete MONDO:0006465)","secondary_identifiers":["EFO:1000592"],"termid":"MONDO:0006465","xrefs":{"Monarch":{"xref_id":"0006465"}}}


id: PBO:0045929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand domain containing 2","termid":"PBO:0045929"}


id: PBO:0078116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 5","termid":"PBO:0078116"}


id: PBO:0065457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit ubiquitin receptor, non-ATPase 4","termid":"PBO:0065457"}


id: GO:0031102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of neuronal processes such as axons or dendrites in response to their loss or damage.","definition_xrefs":["GOC:tb","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regeneration","termid":"GO:0031099"},{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection regeneration","synonyms":[{"name":"neurite regeneration","type":"narrow"}],"termid":"GO:0031102"}


id: PBO:0068275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNASE11 and RNASE12 antisense RNA 1","termid":"PBO:0068275"}


id: GO:0047370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-citramalate + succinyl-CoA = citramalyl-CoA + succinate.","definition_xrefs":["RHEA:38287","PMID:16547052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"succinate-citramalate CoA-transferase activity","secondary_identifiers":["MetaCyc:2.8.3.7-RXN"],"synonyms":[{"name":"citramalate coenzyme A-transferase activity","type":"exact"},{"name":"itaconate CoA-transferase activity","type":"exact"},{"name":"succinyl coenzyme A-citramalyl coenzyme A transferase activity","type":"exact"},{"name":"succinyl-CoA:citramalate CoA-transferase activity","type":"exact"}],"termid":"GO:0047370"}


id: PBO:0040443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 8B4 (putative)","termid":"PBO:0040443"}


id: MONDO:0012572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sakoda complex","secondary_identifiers":["UMLS:C1970485","MESH:C567055","OMIM:610871","MEDGEN:370271"],"synonyms":[{"name":"Sakoda complex","type":"exact"},{"name":"Sakoda spectrum","type":"related"},{"name":"sphenoethmoidal encephalomeningocele agenesis of the corpus callosum and cleft lip/palate","type":"related"},{"name":"sphenoethmoidal encephalomeningocele, agenesis of the corpus callosum, and cleft Lip/palate","type":"related"}],"termid":"MONDO:0012572","xrefs":{"Monarch":{"xref_id":"0012572"}}}


id: FYPO:0000886
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"abnormal histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abnormal histone H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 dimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 dimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3-K9 dimethylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 dimethylation at pericentric region during vegetative growth","type":"related"},{"name":"abnormal histone H3-K9 dimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"abnormal histone H3K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9me2 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000886"}


id: PBO:0051350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-40","termid":"PBO:0051350"}


id: PBO:0090527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex subunit, RNA-binding Cwf5","termid":"PBO:0090527"}


id: PBO:0050914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein with tetratricopeptide repeats 6, pseudogene","termid":"PBO:0050914"}


id: GO:0141110
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of a transporter.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function inhibitor activity","termid":"GO:0140678"},{"relation_name":"is_a","term_name":"transporter regulator activity","termid":"GO:0141108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140678","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"transporter inhibitor activity","termid":"GO:0141110"}


id: PATO:0001639
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A necessity quality inhering in a process by virtue of the bearer's being non-essential or dispensable.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"necessity of occurrent","termid":"PATO:0001637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unnecessary (occurrent)","termid":"PATO:0001639"}


id: PBO:0038757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3B pseudogene 2","termid":"PBO:0038757"}


id: GO:0045627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T-helper 1 cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T-helper cell differentiation","termid":"GO:0045624"},{"relation_name":"is_a","term_name":"regulation of T-helper 1 cell differentiation","termid":"GO:0045625"},{"relation_name":"positively_regulates","term_name":"T-helper 1 cell differentiation","termid":"GO:0045063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of T-helper 1 cell differentiation","synonyms":[{"name":"activation of T-helper 1 cell differentiation","type":"narrow"},{"name":"positive regulation of T-helper 1 cell development","type":"related"},{"name":"stimulation of T-helper 1 cell differentiation","type":"narrow"},{"name":"up regulation of T-helper 1 cell differentiation","type":"exact"},{"name":"up-regulation of T-helper 1 cell differentiation","type":"exact"},{"name":"upregulation of T-helper 1 cell differentiation","type":"exact"}],"termid":"GO:0045627"}


id: GO:1905717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cornification.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:26014679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"},{"relation_name":"is_a","term_name":"regulation of cornification","termid":"GO:1905715"},{"relation_name":"positively_regulates","term_name":"cornification","termid":"GO:0070268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cornification","synonyms":[{"name":"activation of cornification","type":"narrow"},{"name":"up regulation of cornification","type":"exact"},{"name":"up-regulation of cornification","type":"exact"},{"name":"upregulation of cornification","type":"exact"}],"termid":"GO:1905717"}


id: FYPO:0001679
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"}],"single_locus_phenotype":[{"annotations":[121203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004718"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome","termid":"FYPO:0004996"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03892":null},"genotype_count":2,"genotypes_by_uniquename":{"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01050","SJAG_03892"],"name":"abnormal protein localization to chromatin","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03892"],"single_locus_genotype_uniquenames":["vps4delta"],"synonyms":[{"name":"abnormal protein localisation to chromatin","type":"exact"}],"termid":"FYPO:0001679","terms_by_termid":{"FYPO:0001132":null,"FYPO:0004718":null,"FYPO_EXT:0000001":null}}


id: PBO:0109654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3117","termid":"PBO:0109654"}


id: MONDO:0008377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the RP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 1","secondary_identifiers":["ICD10CM:H35.5","OMIM:180100","MESH:C538365","MEDGEN:67395","GARD:9149","UMLS:C0220701","DOID:0110390"],"synonyms":[{"name":"RP","type":"related"},{"name":"RP1","type":"exact"},{"name":"RP1 retinitis pigmentosa","type":"exact"},{"name":"retinitis pigmentosa","type":"related"},{"name":"retinitis pigmentosa 1","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in RP1","type":"exact"},{"name":"retinitis pigmentosa type 1","type":"exact"}],"termid":"MONDO:0008377","xrefs":{"Monarch":{"xref_id":"0008377"}}}


id: GO:0044191
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround the host cell mitochondrion and form the host cell mitochondrial envelope.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"part_of","term_name":"host cell mitochondrial envelope","termid":"GO:0044190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell mitochondrial membrane","termid":"GO:0044191"}


id: GO:0034279
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9-alpha-copalyl diphosphate = 9-beta-pimara-7,15-diene + diphosphate.","definition_xrefs":["RHEA:25560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"syn-pimara-7,15-diene synthase activity","secondary_identifiers":["KEGG_REACTION:R09117","MetaCyc:RXN-4883","EC:4.2.3.35"],"synonyms":[{"name":"9alpha-copalyl-diphosphate diphosphate-lyase (9beta-pimara-7,15-diene-forming) activity","type":"exact"}],"termid":"GO:0034279"}


id: GO:0030553
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cGMP, the nucleotide cyclic GMP (guanosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic nucleotide binding","termid":"GO:0030551"},{"relation_name":"is_a","term_name":"guanyl ribonucleotide binding","termid":"GO:0032561"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cGMP binding","synonyms":[{"name":"3',5' cGMP binding","type":"exact"},{"name":"3',5'-cGMP binding","type":"exact"},{"name":"cyclic GMP binding","type":"exact"}],"termid":"GO:0030553"}


id: PBO:0045933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor like GTPase 1","termid":"PBO:0045933"}


id: PBO:0081897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 848, pseudogene","termid":"PBO:0081897"}


id: PBO:0059280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L38","termid":"PBO:0059280"}


id: MONDO:0030326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial dna depletion syndrome 16B (neuroophthalmic type)","secondary_identifiers":["UMLS:C5543632","MEDGEN:1780329","OMIM:619425","DOID:0070447"],"synonyms":[{"name":"MTDPS16B","type":"exact"},{"name":"mitochondrial dna depletion syndrome 16B (neuroophthalmic type)","type":"exact"}],"termid":"MONDO:0030326","xrefs":{"Monarch":{"xref_id":"0030326"}}}


id: PBO:0065712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parvalbumin like EF-hand containing","termid":"PBO:0065712"}


id: PBO:0075036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-47","termid":"PBO:0075036"}


id: PBO:0082404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of the oligosaccharyl transferase glycoprotein complex; required for N-linked glycosylation of proteins in the endoplasmic reticulum; human homolog DDOST can complement yeast growth defect during down-regulation of yeast gene","termid":"PBO:0082404"}


id: PBO:0079457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal uridylyl transferase 4","termid":"PBO:0079457"}


id: PBO:0076808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin bundle interacting protein 1","termid":"PBO:0076808"}


id: MONDO:0020799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic proliferation of basal cells in the epidermis (part of the skin) or other anatomic sites (most frequently the salivary glands). The basal cell neoplastic proliferation in the epidermis results in basal cell carcinomas. The basal cell neoplastic proliferation in the salivary glands can be benign, resulting in basal cell adenomas or malignant, resulting in basal cell adenocarcinomas.","definition_xrefs":["NCIT:C3784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal cell neoplasm","secondary_identifiers":["MEDGEN:104921","SCTID:127570002","UMLS:C0206710","ICDO:8090/1","EFO:1001763","MESH:D018295"],"synonyms":[{"name":"basal cell tumor","type":"exact"},{"name":"basal cell tumour","type":"exact"},{"name":"neoplasm, basal cell","type":"related"}],"termid":"MONDO:0020799","xrefs":{"Monarch":{"xref_id":"0020799"}}}


id: PBO:0031773
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_G0_to_G1_transition","termid":"PBO:0031773"}


id: MONDO:0008777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gelatinous drop-like corneal dystrophy (GDCD) is a form of superficial corneal dystrophy characterized by multiple prominent milky-white gelatinous nodules beneath the corneal epithelium, and marked visual impairment.","definition_xrefs":["Orphanet:98957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial and subepithelial corneal dystrophy","termid":"MONDO:0000763"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"lattice corneal dystrophy","termid":"MONDO:0004686"},{"relation_name":"is_a","term_name":"superficial corneal dystrophy","termid":"MONDO:0020212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"gelatinous drop-like corneal dystrophy","secondary_identifiers":["UMLS:C0339273","NANDO:1201006","MESH:C535480","NCIT:C142805","GARD:9647","icd11.foundation:1062815669","MEDGEN:90939","OMIM:204870","DOID:0060449"],"synonyms":[{"name":"CDGDL","type":"related"},{"name":"Cdgdl","type":"related"},{"name":"GDCD","type":"exact"},{"name":"GDLD","type":"related"},{"name":"amyloid corneal dystrophy, Japanese type","type":"related"},{"name":"amyloidosis corneal","type":"related"},{"name":"amyloidosis, corneal","type":"related"},{"name":"corneal amyloidosis","type":"exact"},{"name":"corneal dystrophy, gelatinous drop-like","type":"related"},{"name":"corneal dystrophy, lattice type 3","type":"related"},{"name":"gelatinous drop-like corneal dystrophy","type":"exact"},{"name":"lattice corneal dystrophy type 3","type":"related"},{"name":"lattice corneal dystrophy, type 3","type":"related"},{"name":"primary familial amyloidosis of the cornea","type":"exact"},{"name":"subepithelial amyloidosis of the cornea","type":"exact"}],"termid":"MONDO:0008777","xrefs":{"Monarch":{"xref_id":"0008777"}}}


id: PBO:0113455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of hexameric RecA-like ATPase Elp456 Elongator subcomplex; which is required for modification of wobble nucleosides in tRNA; iki1 mutations confer resistance to the K. lactis toxin zymocin; localizes to cytosol, nucleus and peroxisomes","termid":"PBO:0113455"}


id: GO:0098746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The fast, initial phase of calcium ion-induced neurotransmitter release, via exocytosis, into the synaptic cleft. This depends on low affinity calcium sensors and typically begins a fraction of a millisecond after Ca2+ influx, and decays rapidly (1-10ms) with a decay constant of around 5-10ms. The underlying molecular mechanisms of this process are distinct from those of the later, slow phase of release.","definition_xrefs":["GOC:PARL","PMID:7954835","GOC:dos","GOC:pad","PMID:4405553","PMID:7809151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion-regulated exocytosis of neurotransmitter","termid":"GO:0048791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0023052","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"fast, calcium ion-dependent exocytosis of neurotransmitter","synonyms":[{"name":"synchronous, calcium ion-dependent exocytosis of neurotransmitter","type":"exact"}],"termid":"GO:0098746"}


id: PBO:0045212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C5 gamma","termid":"PBO:0045212"}


id: PBO:0056779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mex-3 RNA binding family member A","termid":"PBO:0056779"}


id: PBO:0083226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps with verified gene UBP16/YPL072W; may interact with ribosome based on co-purification experiments","termid":"PBO:0083226"}


id: GO:0004601
data:
  {"annotated_genes":["SJAG_05181","SJAG_01292","SJAG_04632","SJAG_03623","SJAG_00489","SJAG_00141","SJAG_02515","SJAG_01199","SJAG_01216","SJAG_03166","SJAG_04823","SJAG_02630"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81318,108754],"is_not":false,"summary":null,"term":"GO:0004601"},{"annotations":[72761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004096"},{"annotations":[69055,99865,91275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004602"},{"annotations":[64722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051920"},{"annotations":[110808,72000,77615,97101,81208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008379"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a donor + a peroxide = an oxidized donor + 2 H2O.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antioxidant activity","termid":"GO:0016209"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on peroxide as acceptor","termid":"GO:0016684"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00489":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01292":null,"SJAG_02515":null,"SJAG_02630":null,"SJAG_03166":null,"SJAG_03623":null,"SJAG_04632":null,"SJAG_04823":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"peroxidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-8933635","GO:0016687","Reactome:R-HSA-6789126","Reactome:R-HSA-209973","Reactome:R-HSA-2309773","Reactome:R-HSA-3341296","Wikipedia:Peroxidase","Reactome:R-HSA-209815","Reactome:R-HSA-209925","Reactome:R-HSA-5631885","GO:0016693","GO:0016686","EC:1.11.1.-","Reactome:R-HSA-1222346","Reactome:R-HSA-8855490","Reactome:R-HSA-140359","Reactome:R-HSA-209840","KEGG_REACTION:R03532","GO:0016685","Reactome:R-HSA-350901","Reactome:R-HSA-6789031","Reactome:R-HSA-2559639"],"synonyms":[{"name":"MPO","type":"related"},{"name":"bacterial catalase-peroxidase activity","type":"narrow"},{"name":"donor:hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"eosinophil peroxidase activity","type":"narrow"},{"name":"extensin peroxidase","type":"narrow"},{"name":"guaiacol peroxidase","type":"narrow"},{"name":"heme peroxidase","type":"narrow"},{"name":"horseradish peroxidase (HRP)","type":"narrow"},{"name":"japanese radish peroxidase","type":"narrow"},{"name":"lactoperoxidase activity","type":"narrow"},{"name":"myeloperoxidase activity","type":"narrow"},{"name":"oxyperoxidase activity","type":"related"},{"name":"peroxidase reaction","type":"exact"},{"name":"protoheme peroxidase","type":"narrow"},{"name":"pyrocatechol peroxidase","type":"narrow"},{"name":"scopoletin peroxidase","type":"narrow"},{"name":"secretory plant peroxidase activity","type":"narrow"},{"name":"thiocyanate peroxidase","type":"narrow"},{"name":"verdoperoxidase","type":"narrow"}],"termid":"GO:0004601","terms_by_termid":{"GO:0004096":null,"GO:0004601":null,"GO:0004602":null,"GO:0008379":null,"GO:0051920":null}}


id: MONDO:0018023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"},{"relation_name":"is_a","term_name":"hereditary methemoglobinemia","termid":"MONDO:0018963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"hemoglobin M disease","secondary_identifiers":["MESH:C581942","Orphanet:330041","UMLS:C3665425","OMIM:617971","SCTID:74912001","GARD:13007","MEDGEN:777099"],"synonyms":[{"name":"M hemoglobinopathy","type":"exact"},{"name":"autosomal dominant methemoglobinemia","type":"related"},{"name":"blue baby syndrome","type":"related"},{"name":"hereditary methemoglobinemia due to haemoglobin mutation","type":"related"},{"name":"hereditary methemoglobinemia due to hemoglobin mutation","type":"related"},{"name":"methemoglobinemia, beta type","type":"exact"},{"name":"methemoglobinemia, beta-globin type","type":"related"}],"termid":"MONDO:0018023","xrefs":{"Monarch":{"xref_id":"0018023"}}}


id: PBO:0074370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smith-Magenis syndrome chromosome region, candidate 5","termid":"PBO:0074370"}


id: PBO:0061373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 33","termid":"PBO:0061373"}


id: GO:0150060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular amylin, or another ligand, combining with an amylin receptor 2 (AMY2), a G protein-coupled receptor complex, on the surface of the target cell. The AMY2 signaling pathway can also be initiated by adrenomedullin (AM/ADM).","definition_xrefs":["GOC:bc","PMID:22500019","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylin receptor signaling pathway","termid":"GO:0097647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"amylin receptor 2 signaling pathway","synonyms":[{"name":"AMY2 signaling pathway","type":"exact"}],"termid":"GO:0150060"}


id: MONDO:0017450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"split foot","secondary_identifiers":["MEDGEN:140919","icd11.foundation:1406855248","HP:0001839","Orphanet:294994","SCTID:205358006","UMLS:C0432028"],"synonyms":[{"name":"split foot","type":"exact"},{"name":"split foot (disease)","type":"exact"}],"termid":"MONDO:0017450","xrefs":{"Monarch":{"xref_id":"0017450"}}}


id: PBO:0087409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Substrate-specific adaptor protein involved in apo-Rli1p maturation; subunit of the Yae1-Lto1 complex, recruiting apo-Rli1p to the CIA targeting complex, facilitating the insertion of an Fe/S cluster by the Fe-S biosynthetic machinery; deca-GX3 motif crucial for complex formation; essential for aerobic but not anaerobic growth; homolog of human YAE1D1, which is overexpressed in oral cancers; co-expression of YAE1D1 and LTO1 homolog ORAOV1 restores growth and Rli1p maturation after YAE1 depletion","termid":"PBO:0087409"}


id: PBO:0059755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 29","termid":"PBO:0059755"}


id: PBO:0000142
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.3.11","termid":"PBO:0000142"}


id: PBO:0071129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 131","termid":"PBO:0071129"}


id: FYPO:0000715
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to K-252a. Cells stop growing (and may die) at a concentration of K-252a that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to K-252a","synonyms":[{"name":"hypersensitive to K-252a","type":"exact"},{"name":"sensitive to K-252a during mitotic cell cycle","type":"related"},{"name":"sensitive to K-252a during vegetative growth","type":"exact"}],"termid":"FYPO:0000715"}


id: PBO:0043587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL18A1 antisense RNA 1","termid":"PBO:0043587"}


id: MONDO:0011000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase 2E","secondary_identifiers":["OMIM:601138"],"synonyms":[{"name":"GC-E","type":"related"},{"name":"GUCY2E","type":"related"},{"name":"GUCY2EP","type":"related"},{"name":"Gucy2D, mouse, homolog of","type":"related"},{"name":"guanylate cyclase 2E","type":"exact"},{"name":"guanylate cyclase 2E, pseudogene","type":"related"},{"name":"guanylate cyclase type 2E","type":"exact"},{"name":"guanylyl cyclase, Membrane, type E","type":"related"}],"termid":"MONDO:0011000","xrefs":{"Monarch":{"xref_id":"0011000"}}}


id: PBO:0082385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta 5 subunit of the 20S proteasome; responsible for the chymotryptic activity of the proteasome","termid":"PBO:0082385"}


id: GO:0000008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A small disulfide-containing redox protein that serves as a general protein disulfide oxidoreductase. Interacts with a broad range of proteins by a redox mechanism, based on the reversible oxidation of 2 cysteine thiol groups to a disulfide, accompanied by the transfer of 2 electrons and 2 protons. The net result is the covalent interconversion of a disulfide and a dithiol.","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete thioredoxin (obsolete GO:0000008)","synonyms":[{"name":"thioredoxin","type":"exact"}],"termid":"GO:0000008"}


id: MONDO:1011950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondroma causing progressive posterior paresis, non-human animal","secondary_identifiers":["OMIA:000749"],"termid":"MONDO:1011950","xrefs":{"Monarch":{"xref_id":"1011950"}}}


id: PBO:0075901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2","termid":"PBO:0075901"}


id: GO:0060969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency, or extent of gene silencing, the transcriptional or post-transcriptional process carried out at the cellular level that results in long-term gene inactivation.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of gene silencing (obsolete GO:0060969)","termid":"GO:0060969"}


id: FYPO:0007515
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which RNA stability is decreased during a cellular response to oxidative stress. RNA molecules are more likely to degrade over a given time period than in wild type. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah","PMID:14633985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA stability","termid":"FYPO:0003038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA stability during cellular response to oxidative stress","synonyms":[{"name":"decreased RNA stability during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"decreased RNA stability during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"decreased RNA stability in response to oxidative stress","type":"exact"},{"name":"reduced RNA stability during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0007515"}


id: PBO:0070934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 42","termid":"PBO:0070934"}


id: GO:0070461
data:
  {"annotated_genes":["SJAG_03776","SJAG_03752","SJAG_02927","SJAG_00087","SJAG_00584","SJAG_00641","SJAG_02541","SJAG_02458","SJAG_01711","SJAG_04205","SJAG_03668","SJAG_01475","SJAG_02066","SJAG_03599","SJAG_01658","SJAG_00184","SJAG_02773","SJAG_04613","SJAG_04274"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[118286,113733,75556,63955,78941,58070,73326,67704,80660,75270,119574,105296,72696,93287,90353,75726,77342,62677,78484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000124"},{"annotations":[63957,58497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046695"}]},"cv_name":"cellular_component","definition":"A histone acetyltransferase complex that acetylates nucleosomal histones H2B, H3, or H4 and is required for the expression of a subset of Pol II-transcribed genes. This complex includes the acetyltransferases GCN5/KAT2A or PCAF/KAT2B, several proteins of the ADA, SGF and SPT families, and several TBP-associate proteins (TAFs).","definition_xrefs":["GOC:mah","PMID:10637607","PMID:17337012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone acetyltransferase complex","termid":"GO:0000123"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00184":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_01475":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_02066":null,"SJAG_02458":null,"SJAG_02541":null,"SJAG_02773":null,"SJAG_02927":null,"SJAG_03599":null,"SJAG_03668":null,"SJAG_03752":null,"SJAG_03776":null,"SJAG_04205":null,"SJAG_04274":null,"SJAG_04613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"SAGA-type complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"SAGA family complex","type":"exact"}],"termid":"GO:0070461","terms_by_termid":{"GO:0000124":null,"GO:0046695":null}}


id: GO:0035919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a low voltage-gated calcium channel in another organism. A low voltage-gated channel is a channel whose open state is dependent on low voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:fj","PMID:20920515","GOC:bf","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of low voltage-gated calcium channel activity in another organism (obsolete GO:0035919)","synonyms":[{"name":"down-regulation of low voltage-gated calcium channel activity in other organism","type":"exact"},{"name":"downregulation of low voltage-gated calcium channel activity in other organism","type":"exact"},{"name":"inhibition of low voltage-gated calcium channel activity in other organism","type":"narrow"},{"name":"negative regulation of low voltage gated calcium channel activity in other organism","type":"exact"},{"name":"negative regulation of low voltage-dependent calcium channel activity in other organism","type":"exact"},{"name":"negative regulation of low voltage-gated calcium channel activity in other organism","type":"exact"}],"termid":"GO:0035919"}


id: MONDO:0010364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked intellectual disability-retinitis pigmentosa syndrome is characterized by moderate intellectual deficit and severe, early-onset retinitis pigmentosa. It has been described in five males spanning three generations of one family. Some patients also had microcephaly. It is transmitted as an X-linked recessive trait.","definition_xrefs":["Orphanet:85332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial monosomy of the short arm of chromosome X","termid":"MONDO:0017004"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability-retinitis pigmentosa syndrome","secondary_identifiers":["MEDGEN:336862","UMLS:C1845136","GARD:8360","OMIM:300578","ICD10CM:H35.5","SCTID:719808002"],"synonyms":[{"name":"Aldred syndrome","type":"exact"},{"name":"X-linked mental handicap-retinitis pigmentosa syndrome","type":"related"},{"name":"chromosome Xp11.3 deletion syndrome","type":"related"},{"name":"chromosome xp11.3 deletion syndrome, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked, with retinitis pigmentosa","type":"related"},{"name":"mental retardation, X-linked, with retinitis pigmentosa","type":"related"},{"name":"nonspecific intellectual disability associated with retinitis pigmentosa","type":"related"},{"name":"nonspecific mental retardation associated with retinitis pigmentosa","type":"related"},{"name":"retinitis pigmentosa and intellectual disability due to Xp11.3 microdeletion","type":"exact"},{"name":"retinitis pigmentosa and intellectual disability due to del(X)(p11.3)","type":"exact"},{"name":"retinitis pigmentosa and intellectual disability due to monosomy Xp11.3","type":"exact"}],"termid":"MONDO:0010364","xrefs":{"Monarch":{"xref_id":"0010364"}}}


id: GO:0160211
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the lipid bilayers that surround an apicoplast and form the apicoplast envelope.","definition_xrefs":["PMID:20124342","PMID:38865262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"part_of","term_name":"apicoplast","termid":"GO:0020011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"apicoplast membrane","termid":"GO:0160211"}


id: PBO:0061122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 11","termid":"PBO:0061122"}


id: PATO:0002324
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The temporal relation between the end of the process with respect to a reference process.","definition_xrefs":["PATOC:LC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporal distribution quality","termid":"PATO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"offset quality","termid":"PATO:0002324"}


id: PBO:0056877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MHC class I polypeptide-related sequence G (pseudogene)","termid":"PBO:0056877"}


id: PBO:0067284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 366, pseudogene","termid":"PBO:0067284"}


id: PBO:0084881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial RNA polymerase; single subunit enzyme similar to those of T3 and T7 bacteriophages; requires a specificity subunit encoded by MTF1 for promoter recognition; Mtf1p interacts with and stabilizes the Rpo41p-promoter complex, enhancing DNA bending and melting to facilitate pre-initiation open complex formation; Rpo41p also synthesizes RNA primers for mitochondrial DNA replication","termid":"PBO:0084881"}


id: PBO:0082857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of transport protein particle (TRAPP) complexes I-III; TRAPP complexes are related multimeric guanine nucleotide-exchange factors for the GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII); human homology TRAPPC1 complements yeast null mutant","termid":"PBO:0082857"}


id: GO:0034299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a spore following the marked enlargement of part of a cell before separation by a septum. Blastospores are a type of asexual spore found in some fungi, most notably the class Glomeromycota.","definition_xrefs":["GOC:mah","PMID:30910084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conidium formation","termid":"GO:0048315"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reproductive blastospore formation","synonyms":[{"name":"blastoconidium formation","type":"exact"}],"termid":"GO:0034299"}


id: MONDO:0007936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal dystrophy","termid":"MONDO:0018102"},{"relation_name":"is_a","term_name":"hereditary macular dystrophy","termid":"MONDO:0020242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"macular dystrophy, fenestrated sheen type","secondary_identifiers":["MEDGEN:331921","UMLS:C1835173","OMIM:153890","MESH:C563607"],"synonyms":[{"name":"macular dystrophy, fenestrated sheen type","type":"exact"}],"termid":"MONDO:0007936","xrefs":{"Monarch":{"xref_id":"0007936"}}}


id: GO:1904781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to centrosome.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:17115027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"regulation of protein localization to centrosome","termid":"GO:1904779"},{"relation_name":"positively_regulates","term_name":"protein localization to centrosome","termid":"GO:0071539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to centrosome","synonyms":[{"name":"activation of protein localisation to centrosome","type":"narrow"},{"name":"activation of protein localization to centrosome","type":"narrow"},{"name":"positive regulation of protein localisation to centrosome","type":"exact"},{"name":"up regulation of protein localisation to centrosome","type":"exact"},{"name":"up regulation of protein localization to centrosome","type":"exact"},{"name":"up-regulation of protein localisation to centrosome","type":"exact"},{"name":"up-regulation of protein localization to centrosome","type":"exact"},{"name":"upregulation of protein localisation to centrosome","type":"exact"},{"name":"upregulation of protein localization to centrosome","type":"exact"}],"termid":"GO:1904781"}


id: MONDO:0022899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crawfurd syndrome","termid":"MONDO:0022899","xrefs":{"Monarch":{"xref_id":"0022899"}}}


id: MONDO:0006941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious disease that is caused transmitted by the bite of a rat. Two species of bacteria can cause the infection: Streptobacillus moniliformis and Spirillum minus.","definition_xrefs":["NCIT:C34971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rat-bite fever","secondary_identifiers":["MedDRA:10037904","UMLS:C0034686","GARD:9557","icd11.foundation:1026551291","ICD9:026.9","MESH:D011906","EFO:1001144","MEDGEN:11123","Orphanet:31205","SCTID:1685005"],"synonyms":[{"name":"Streptobacillosis","type":"exact"},{"name":"rat bite fever","type":"related"},{"name":"spirillosis","type":"exact"}],"termid":"MONDO:0006941","xrefs":{"Monarch":{"xref_id":"0006941"}}}


id: PBO:0060829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NECTIN3 antisense RNA 1","termid":"PBO:0060829"}


id: PBO:0088279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPPDE peptidase family deubiquitinase/desumoylase Sdu1","termid":"PBO:0088279"}


id: PBO:0068958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 202, pseudogene","termid":"PBO:0068958"}


id: GO:0097204
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The older part of the phagocytic cup where the actin cytoskeleton disassembles, allowing early incoming and outgoing vesicular trafficking.","definition_xrefs":["PMID:20200225","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"phagocytic cup","termid":"GO:0001891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"phagocytic cup base","termid":"GO:0097204"}


id: GO:1905505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of motile cilium assembly.","definition_xrefs":["GOC:cilia","GOC:TermGenie","GO_REF:0000058","PMID:25294941","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cilium assembly","termid":"GO:0045724"},{"relation_name":"is_a","term_name":"regulation of motile cilium assembly","termid":"GO:1905503"},{"relation_name":"positively_regulates","term_name":"motile cilium assembly","termid":"GO:0044458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of motile cilium assembly","synonyms":[{"name":"activation of motile primary cilia assembly","type":"narrow"},{"name":"activation of motile primary cilia formation","type":"narrow"},{"name":"activation of motile primary cilium assembly","type":"narrow"},{"name":"activation of motile primary cilium formation","type":"narrow"},{"name":"activation of nodal cilium assembly","type":"related"},{"name":"activation of nodal cilium formation","type":"related"},{"name":"positive regulation of motile primary cilia assembly","type":"related"},{"name":"positive regulation of motile primary cilia formation","type":"related"},{"name":"positive regulation of motile primary cilium assembly","type":"related"},{"name":"positive regulation of motile primary cilium formation","type":"related"},{"name":"positive regulation of nodal cilium assembly","type":"related"},{"name":"positive regulation of nodal cilium formation","type":"related"},{"name":"up regulation of motile primary cilia assembly","type":"related"},{"name":"up regulation of motile primary cilia formation","type":"related"},{"name":"up regulation of motile primary cilium assembly","type":"related"},{"name":"up regulation of motile primary cilium formation","type":"related"},{"name":"up regulation of nodal cilium assembly","type":"related"},{"name":"up regulation of nodal cilium formation","type":"related"},{"name":"up-regulation of motile primary cilia assembly","type":"related"},{"name":"up-regulation of motile primary cilia formation","type":"related"},{"name":"up-regulation of motile primary cilium assembly","type":"related"},{"name":"up-regulation of motile primary cilium formation","type":"related"},{"name":"up-regulation of nodal cilium assembly","type":"related"},{"name":"up-regulation of nodal cilium formation","type":"related"},{"name":"upregulation of motile primary cilia assembly","type":"related"},{"name":"upregulation of motile primary cilia formation","type":"related"},{"name":"upregulation of motile primary cilium assembly","type":"related"},{"name":"upregulation of motile primary cilium formation","type":"related"},{"name":"upregulation of nodal cilium assembly","type":"related"},{"name":"upregulation of nodal cilium formation","type":"related"}],"termid":"GO:1905505"}


id: PBO:0084582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YCL060C was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YCL061C","termid":"PBO:0084582"}


id: MONDO:0006807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rupture in the wall of the small or large intestine due to traumatic or pathologic processes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal perforation","secondary_identifiers":["NCIT:C39611","EFO:1000987","ICD9:569.83","MEDGEN:9525","SCTID:56905009","DOID:2074","MESH:D007416","ICD9:777.6","UMLS:C0021845","MedDRA:10022694"],"synonyms":[{"name":"bowel perforation","type":"exact"},{"name":"perforation of intestine","type":"exact"}],"termid":"MONDO:0006807","xrefs":{"Monarch":{"xref_id":"0006807"}}}


id: GO:0001990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which hormones modulate the force with which blood passes through the circulatory system. A hormone is one of a group of substances formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells, in the same organism, upon which they have a specific regulatory action.","definition_xrefs":["ISBN:0721643949","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure mediated by a chemical signal","termid":"GO:0003044"},{"relation_name":"is_a","term_name":"endocrine process","termid":"GO:0050886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by hormone","synonyms":[{"name":"blood pressure regulation by hormone","type":"exact"},{"name":"hormonal control of blood pressure","type":"related"},{"name":"hormonal regulation of blood pressure","type":"exact"}],"termid":"GO:0001990"}


id: GO:0097316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an N-acetyl-D-glucosamine stimulus.","definition_xrefs":["PMID:21700702","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to N-acetyl-D-glucosamine","termid":"GO:0097315"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to N-acetyl-D-glucosamine","termid":"GO:0097316"}


id: GO:0140934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A deubiquitinase that cleaves ubiquitin from a histone protein to which it is conjugated.","definition_xrefs":["PMID:18206972","PMID:18226187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deubiquitinase activity","termid":"GO:0101005"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0008233","GO:0016787","GO:0003674","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"histone deubiquitinase activity","synonyms":[{"name":"histone deubiquitination","type":"related"}],"termid":"GO:0140934"}


id: MONDO:0011611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature, intellectual disability, callosal agenesis, Heminasal hypoplasia, microphthalmia, and atypical clefting","secondary_identifiers":["MEDGEN:370814","MESH:C566989","UMLS:C1970039","OMIM:605856"],"synonyms":[{"name":"short stature, intellectual disability, callosal agenesis, Heminasal hypoplasia, microphthalmia, and atypical clefting","type":"exact"},{"name":"short stature, mental retardation, callosal agenesis, Heminasal hypoplasia, microphthalmia, and atypical clefting","type":"exact"}],"termid":"MONDO:0011611","xrefs":{"Monarch":{"xref_id":"0011611"}}}


id: GO:0031526
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding the brush border.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"part_of","term_name":"brush border","termid":"GO:0005903"},{"relation_name":"part_of","term_name":"apical plasma membrane","termid":"GO:0016324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"brush border membrane","termid":"GO:0031526"}


id: FYPO:0007184
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is increased during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein kinase activity","termid":"FYPO:0002700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"increased protein kinase activity during mitosis","synonyms":[{"name":"increased protein kinase activity during mitotic M phase","type":"related"},{"name":"increased protein kinase activity during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0007184"}


id: PBO:0050965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon nu 1, pseudogene","termid":"PBO:0050965"}


id: PBO:0113322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase; minor role relative to Kin4p in regulating peroxisomal transport and vacuolar inheritance; protects the peroxisomal Myo2p receptor Inp2p from degradation in mother cells along with Kin4p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; interacts with rRNA transcription and ribosome biogenesis factors and the long chain fatty acyl-CoA synthetase Faa3p; FRK1 has a paralog, KIN4, that arose from the whole genome duplication","termid":"PBO:0113322"}


id: GO:0009073
data:
  {"annotated_genes":["SJAG_02400","SJAG_02505","SJAG_03167","SJAG_00337","SJAG_03775","SJAG_00518","SJAG_00224","SJAG_01137","SJAG_03580","SJAG_03124","SJAG_05007","SJAG_01455","SJAG_02408","SJAG_00592","SJAG_04747","SJAG_00248","SJAG_03312","SJAG_01346","SJAG_03485","SJAG_04652","SJAG_03055"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60344,74483,76735,78696,80001],"is_not":false,"summary":null,"term":"GO:0009073"},{"annotations":[74765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008153"},{"annotations":[65351,77458,72897,82090,58061,60403,80205,78379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000105"},{"annotations":[79714,100257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009094"},{"annotations":[75214,75942,79008,70062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"},{"annotations":[80527,78443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006571"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00224":null,"SJAG_00248":null,"SJAG_00337":null,"SJAG_00518":null,"SJAG_00592":null,"SJAG_01137":null,"SJAG_01346":null,"SJAG_01455":null,"SJAG_02400":null,"SJAG_02408":null,"SJAG_02505":null,"SJAG_03055":null,"SJAG_03124":null,"SJAG_03167":null,"SJAG_03312":null,"SJAG_03485":null,"SJAG_03580":null,"SJAG_03775":null,"SJAG_04652":null,"SJAG_04747":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"aromatic amino acid family biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:COMPLETE-ARO-PWY","GO:0016089"],"synonyms":[{"name":"aromatic amino acid family anabolism","type":"exact"},{"name":"aromatic amino acid family biosynthesis","type":"exact"},{"name":"aromatic amino acid family biosynthetic process, shikimate pathway","type":"related"},{"name":"aromatic amino acid family formation","type":"exact"},{"name":"aromatic amino acid family synthesis","type":"exact"}],"termid":"GO:0009073","terms_by_termid":{"GO:0000105":null,"GO:0000162":null,"GO:0006571":null,"GO:0008153":null,"GO:0009073":null,"GO:0009094":null}}


id: PBO:0057818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3138","termid":"PBO:0057818"}


id: PBO:0031456
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_staurosporine","termid":"PBO:0031456"}


id: PBO:0110414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSBP3 pseudogene 4","termid":"PBO:0110414"}


id: GO:0034887
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,4-dihydroisonicotinate + O2 = gamma-N-formylaminovinylacetaldehyde + CO2.","definition_xrefs":["UM-BBD_reactionID:r1348"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,4-dihydroisonicotinate 2,3-dioxygenase activity (obsolete GO:0034887)","synonyms":[{"name":"1,4-dihydroisonicotinate 2,3-dioxygenase activity","type":"exact"}],"termid":"GO:0034887"}


id: RO:0003301
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between a research artifact and an entity it is used to study, in virtue of its replicating or approximating features of the studied entity.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_model_of","termid":"RO:0003301"}


id: PBO:0109311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA oncogene in liver cancer 1","termid":"PBO:0109311"}


id: PBO:0040688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast carcinoma amplified sequence 4","termid":"PBO:0040688"}


id: GO:1904243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pancreatic trypsinogen secretion.","definition_xrefs":["PMID:12771515","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"regulation of pancreatic trypsinogen secretion","termid":"GO:1904242"},{"relation_name":"negatively_regulates","term_name":"pancreatic trypsinogen secretion","termid":"GO:1990747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of pancreatic trypsinogen secretion","synonyms":[{"name":"down regulation of pancreatic trypsinogen release","type":"exact"},{"name":"down regulation of pancreatic trypsinogen secretion","type":"exact"},{"name":"down-regulation of pancreatic trypsinogen release","type":"exact"},{"name":"down-regulation of pancreatic trypsinogen secretion","type":"exact"},{"name":"downregulation of pancreatic trypsinogen release","type":"exact"},{"name":"downregulation of pancreatic trypsinogen secretion","type":"exact"},{"name":"inhibition of pancreatic trypsinogen release","type":"narrow"},{"name":"inhibition of pancreatic trypsinogen secretion","type":"narrow"},{"name":"negative regulation of pancreatic trypsinogen release","type":"exact"}],"termid":"GO:1904243"}


id: PBO:0000104
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predominantly uniformly single copy (one to one)","termid":"PBO:0000104"}


id: MONDO:0975751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intellectual disability, autosomal dominant 20","termid":"MONDO:0013266"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain abnormalities-severe developmental delay-facial dysmorphism-intellectual disability syndrome due to MEF2C mutation","secondary_identifiers":["Orphanet:664416","MEDGEN:1863635","UMLS:C5925059"],"termid":"MONDO:0975751","xrefs":{"Monarch":{"xref_id":"0975751"}}}


id: GO:0008117
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sphinganine 1-phosphate = phosphoethanolamine + palmitaldehyde.","definition_xrefs":["EC:4.1.2.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"sphinganine-1-phosphate aldolase activity","secondary_identifiers":["MetaCyc:SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN","Reactome:R-HSA-428681","RHEA:18593","GO:0016001"],"synonyms":[{"name":"dihydrosphingosine 1-phosphate aldolase activity","type":"related"},{"name":"sphinganine-1-phosphate alkanal-lyase activity","type":"related"},{"name":"sphinganine-1-phosphate lyase activity","type":"related"},{"name":"sphinganine-1-phosphate palmitaldehyde-lyase (phosphoethanolamine-forming)","type":"related"},{"name":"sphinganine-1-phosphate palmitaldehyde-lyase activity","type":"related"},{"name":"sphingosine-1-phosphate aldolase activity","type":"related"},{"name":"sphingosine-1-phosphate lyase activity","type":"related"}],"termid":"GO:0008117"}


id: GO:0019958
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C-X-C chemokine; C-X-C chemokines have a single amino acid between the first two cysteines of the characteristic four cysteine motif.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine binding","termid":"GO:0019956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"C-X-C chemokine binding","termid":"GO:0019958"}


id: PBO:0031853
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_hydrogen_sulfide_biosynthesis","termid":"PBO:0031853"}


id: GO:1903643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of recombination hotspot binding.","definition_xrefs":["GOC:TermGenie","PMID:19436749","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of recombination hotspot binding (obsolete GO:1903643)","synonyms":[{"name":"activation of DNA binding, recombination hotspot","type":"narrow"},{"name":"activation of recombination hotspot binding","type":"narrow"},{"name":"positive regulation of DNA binding, recombination hotspot","type":"exact"},{"name":"up regulation of DNA binding, recombination hotspot","type":"exact"},{"name":"up regulation of recombination hotspot binding","type":"exact"},{"name":"up-regulation of DNA binding, recombination hotspot","type":"exact"},{"name":"up-regulation of recombination hotspot binding","type":"exact"},{"name":"upregulation of DNA binding, recombination hotspot","type":"exact"},{"name":"upregulation of recombination hotspot binding","type":"exact"}],"termid":"GO:1903643"}


id: PBO:0050679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 6","termid":"PBO:0050679"}


id: PBO:0090545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S21","termid":"PBO:0090545"}


id: PBO:0061955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 9 pseudogene","termid":"PBO:0061955"}


id: MONDO:0018144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital myasthenic syndromes with glycosylation defect (obsolete MONDO:0018144)","secondary_identifiers":["Orphanet:353327"],"termid":"MONDO:0018144","xrefs":{"Monarch":{"xref_id":"0018144"}}}


id: GO:0034151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 6 signaling pathway.","definition_xrefs":["PMID:16551253","GOC:add","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor 6 signaling pathway","termid":"GO:0034150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of toll-like receptor 6 signaling pathway","synonyms":[{"name":"regulation of TLR6 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 6 signalling pathway","type":"exact"}],"termid":"GO:0034151"}


id: PBO:0026849
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_snRNA_gene","termid":"PBO:0026849"}


id: PBO:0030488
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_malonic_acid_import","termid":"PBO:0030488"}


id: GO:0001949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epidermal cell acquires the specialized features of a sebaceous gland cell.","definition_xrefs":["PMID:15737203","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal cell differentiation","termid":"GO:0009913"},{"relation_name":"part_of","term_name":"sebaceous gland development","termid":"GO:0048733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sebaceous gland cell differentiation","synonyms":[{"name":"sebocytes differentiation","type":"narrow"}],"termid":"GO:0001949"}


id: SO:0000511
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including at least one J-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_gene_cluster","termid":"SO:0000482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"J_C_cluster","synonyms":[{"name":"J C cluster","type":"exact"},{"name":"J-C-CLUSTER","type":"exact"}],"termid":"SO:0000511"}


id: PBO:0082400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of the CAAX farnesyltransferase (FTase); this complex prenylates the a-factor mating pheromone and Ras proteins; required for the membrane localization of Ras proteins and a-factor; homolog of the mammalian FTase beta subunit","termid":"PBO:0082400"}


id: GO:0010288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lead ion stimulus.","definition_xrefs":["GOC:tair_curators","PMID:16461380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to lead ion","termid":"GO:0010288"}


id: PBO:0029217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_heat","termid":"PBO:0029217"}


id: GO:0035811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the amount of urine excreted from the body over a unit of time.","definition_xrefs":["GOC:yaf","GOC:mtg_25march11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of urine volume","termid":"GO:0035809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of urine volume","synonyms":[{"name":"antidiuresis","type":"broad"},{"name":"decrease in urine flow","type":"exact"},{"name":"reduction of urinary volume","type":"exact"}],"termid":"GO:0035811"}


id: MONDO:0013978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the PNPT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 70","secondary_identifiers":["MEDGEN:760477","DOID:0110521","GARD:22646","UMLS:C1824925","OMIM:614934"],"synonyms":[{"name":"DFNB70","type":"narrow"},{"name":"PNPT1 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 70","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 70","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in PNPT1","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 70","type":"narrow"},{"name":"deafness, autosomal recessive 70","type":"narrow"},{"name":"deafness, autosomal recessive type 70","type":"narrow"}],"termid":"MONDO:0013978","xrefs":{"Monarch":{"xref_id":"0013978"}}}


id: GO:0098038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Process by which a transposable element is excised from the donor site and integrated at the target site without replication of the element. Also referred to as cut-and-paste transposition.","definition_xrefs":["GOC:bm","PMID:2553270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA transposition","termid":"GO:0006313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"non-replicative DNA transposition","synonyms":[{"name":"cut-and-paste transposition","type":"exact"},{"name":"non-replicative transposition, DNA-mediated","type":"exact"}],"termid":"GO:0098038"}


id: PBO:0028095
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_replication_origin_binding","termid":"PBO:0028095"}


id: PBO:0040197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 10","termid":"PBO:0040197"}


id: PBO:0039330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate lipoxygenase 3","termid":"PBO:0039330"}


id: MONDO:0016505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoma of the adrenal cortex that produces aldosterone. It may be associated with Conn syndrome. Clinical presentation includes hypertension, hypokalemia, and muscle weakness.","definition_xrefs":["NCIT:C48451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary aldosteronism","termid":"MONDO:0001422"},{"relation_name":"is_a","term_name":"adrenal cortex adenoma","termid":"MONDO:0003924"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldosterone-producing adrenal cortex adenoma","secondary_identifiers":["GARD:20621","MedDRA:10056950","UMLS:C1706762","Orphanet:231625","EFO:1000015","MEDGEN:353374","MESH:D018246"],"synonyms":[{"name":"APAC","type":"exact"},{"name":"Pure APAC","type":"exact"},{"name":"Pure aldosterone-producing adrenocortical carcinoma","type":"exact"},{"name":"Pure aldosterone-secreting adrenocortical carcinoma","type":"exact"},{"name":"adrenocortical carcinoma with pure aldosterone hypersecretion","type":"related"},{"name":"aldosterone producing adrenal cortex adenoma","type":"exact"},{"name":"aldosterone producing adrenal cortical adenoma","type":"exact"},{"name":"aldosterone-producing adrenal cortex adenoma","type":"exact"}],"termid":"MONDO:0016505","xrefs":{"Monarch":{"xref_id":"0016505"}}}


id: PBO:0043440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2","termid":"PBO:0043440"}


id: PR:Q09731
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bun107 gene.","definition_xrefs":["UniProtKB:Q09731","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBP9-binding protein bun107 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.14","synonyms":[{"name":"Spom972h-bun107","type":"exact"},{"name":"binding ubp9 protein of 107 kDa (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09731"}


id: MONDO:0023041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ectodermal dysplasia Berlin type (obsolete MONDO:0023041)","termid":"MONDO:0023041","xrefs":{"Monarch":{"xref_id":"0023041"}}}


id: GO:0099065
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the spine apparatus membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of spine apparatus membrane (obsolete GO:0099065)","termid":"GO:0099065"}


id: PBO:0109120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase Hhy1","termid":"PBO:0109120"}


id: GO:0070782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipid scrambling process that results in the appearance of phosphatidylserine on the outer leaflet of the plasma membrane of an apoptotic cell, which acts as an 'eat-me' signal for engulfing cells. Phosphatidylserine is exposed on the apoptotic cell surface by a phospholipid scramblase activity.","definition_xrefs":["GOC:mah","GOC:rk","GOC:mtg_apoptosis","PMID:11536005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane phospholipid scrambling","termid":"GO:0017121"},{"relation_name":"part_of","term_name":"execution phase of apoptosis","termid":"GO:0097194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0061024"],"is_obsolete":false,"name":"phosphatidylserine exposure on apoptotic cell surface","synonyms":[{"name":"externalization of phosphatidylserine","type":"exact"}],"termid":"GO:0070782"}


id: GO:1900159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bone mineralization involved in bone maturation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of bone mineralization","termid":"GO:0030501"},{"relation_name":"is_a","term_name":"regulation of bone mineralization involved in bone maturation","termid":"GO:1900157"},{"relation_name":"positively_regulates","term_name":"bone mineralization involved in bone maturation","termid":"GO:0035630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bone mineralization involved in bone maturation","synonyms":[{"name":"activation of bone mineralization involved in bone maturation","type":"narrow"},{"name":"up regulation of bone mineralization involved in bone maturation","type":"exact"},{"name":"up-regulation of bone mineralization involved in bone maturation","type":"exact"},{"name":"upregulation of bone mineralization involved in bone maturation","type":"exact"}],"termid":"GO:1900159"}


id: PBO:0080279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 42 pseudogene","termid":"PBO:0080279"}


id: PBO:0001872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein Pep5/Vps11-like (predicted)","termid":"PBO:0001872"}


id: PBO:0069031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 276, pseudogene","termid":"PBO:0069031"}


id: MONDO:0014458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Fanconi syndrome in which the cause of the disease is a mutation in the HNF4A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity-onset diabetes of the young","termid":"MONDO:0018911"},{"relation_name":"is_a","term_name":"inherited Fanconi renotubular syndrome","termid":"MONDO:0100238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0005015","MONDO:0037792","MONDO:0005066","MONDO:0004335","MONDO:0019254"],"is_obsolete":false,"name":"Fanconi renotubular syndrome 4 with maturity-onset diabetes of the young","secondary_identifiers":["DOID:0080760","OMIM:616026","MEDGEN:863399","GARD:16048","UMLS:C4014962"],"synonyms":[{"name":"FRTS4","type":"related"},{"name":"FRTS4 with MODY","type":"related"},{"name":"Fanconi renotubular syndrome 4 with maturity-onset diabetes of the young","type":"exact"},{"name":"Fanconi syndrome caused by mutation in HNF4A","type":"exact"},{"name":"HNF4A Fanconi syndrome","type":"exact"},{"name":"fanconi renotubular syndrome 4, with maturity-onset diabetes of the young","type":"exact"}],"termid":"MONDO:0014458","xrefs":{"Monarch":{"xref_id":"0014458"}}}


id: GO:0006190
data:
  {"annotated_genes":["SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71666],"is_not":false,"summary":null,"term":"GO:0006190"}]},"cv_name":"biological_process","definition":"Any process that generates inosine, hypoxanthine riboside, from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside salvage","termid":"GO:0006166"},{"relation_name":"is_a","term_name":"inosine biosynthetic process","termid":"GO:0046103"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"inosine salvage","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"adenine, hypoxanthine and their nucleoside salvage","type":"related"},{"name":"guanine, xanthine and their nucleoside salvage","type":"related"}],"termid":"GO:0006190","terms_by_termid":{"GO:0006190":null}}


id: FYPO:0003599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of an snRNA molecule is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0034472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA processing","termid":"FYPO:0001980"},{"relation_name":"is_a","term_name":"normal RNA metabolic process","termid":"FYPO:0004850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal snRNA 3'-end processing","synonyms":[{"name":"normal snRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"normal snRNA 3'-end processing during vegetative growth","type":"exact"}],"termid":"FYPO:0003599"}


id: PBO:0046374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosome associated trafficking regulator 1","termid":"PBO:0046374"}


id: PBO:0029118
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_elongated_tapered_cell","termid":"PBO:0029118"}


id: GO:0044192
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner, i.e. lumen-facing, lipid bilayer of the host cell mitochondrial envelope. It is highly folded to form cristae.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell mitochondrial membrane","termid":"GO:0044191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell mitochondrial inner membrane","termid":"GO:0044192"}


id: GO:0060594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the mammary line is specified. The mammary line is a ridge of epidermal cells that will form the mammary placodes.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of animal organ identity","termid":"GO:0010092"},{"relation_name":"is_a","term_name":"mammary gland formation","termid":"GO:0060592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland specification","synonyms":[{"name":"mammary line specification","type":"related"}],"termid":"GO:0060594"}


id: PBO:0030275
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_targeting_to_vacuole","termid":"PBO:0030275"}


id: PBO:0076834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TERF1 pseudogene 1","termid":"PBO:0076834"}


id: GO:0090339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of formin-nucleated actin cable assembly. Formin-nucleated actin cable assembly is the aggregation, arrangement and bonding together of a set of components to form a formin-nucleated actin cable. A formin-nucleated actin cable is an actin filament bundle that consists of short filaments organized into bundles of uniform polarity, and is nucleated by formins.","definition_xrefs":["PMID:12810699","PMID:15923184","GOC:tb","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of actin filament bundle assembly","termid":"GO:0032232"},{"relation_name":"is_a","term_name":"regulation of formin-nucleated actin cable assembly","termid":"GO:0090337"},{"relation_name":"negatively_regulates","term_name":"formin-nucleated actin cable assembly","termid":"GO:0070649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010","GO:0044085"],"is_obsolete":false,"name":"negative regulation of formin-nucleated actin cable assembly","termid":"GO:0090339"}


id: FYPO:0000068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of K-252a than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002682"],"is_obsolete":false,"name":"resistance to K-252a","synonyms":[{"name":"resistance to K-252a during mitotic cell cycle","type":"related"},{"name":"resistance to K-252a during vegetative growth","type":"exact"},{"name":"resistant to K-252a","type":"exact"}],"termid":"FYPO:0000068"}


id: SO:0001110
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of three residues within a beta-sheet consisting of two H-bonds in which: the main-chain NH of residue(i) is H-bonded to the main-chain CO of residue(i+5), the main-chain CO of residue i is H-bonded to the main-chain NH of residue(i+4), these loops have an RL nest at residues i+3 and i+4.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_bulge_loop","termid":"SO:0001108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_bulge_loop_six","secondary_identifiers":["BS:00211"],"synonyms":[{"name":"beta bulge loop six","type":"exact"}],"termid":"SO:0001110"}


id: PBO:0065138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKX pseudogene 1","termid":"PBO:0065138"}


id: GO:0006508
data:
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id: PBO:0078785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 9-2","termid":"PBO:0078785"}


id: PBO:0031497
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_N-methyl-N'-nitro-N-nitrosoguanidine","termid":"PBO:0031497"}


id: GO:0019727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-mevalonate + NAD+ = H+ + mevaldate + NADH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mevaldate reductase (NADH) activity (obsolete GO:0019727)","termid":"GO:0019727"}


id: MONDO:0018726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immunodeficiency due to a complement cascade component deficiency (obsolete MONDO:0018726)","termid":"MONDO:0018726","xrefs":{"Monarch":{"xref_id":"0018726"}}}


id: PBO:0055755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA osteogenesis associated","termid":"PBO:0055755"}


id: PBO:0075827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal sequence receptor subunit 2","termid":"PBO:0075827"}


id: PBO:0074316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD5 antisense RNA 1","termid":"PBO:0074316"}


id: MONDO:1011560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephroma that occurs in ducks.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"nephroma, non-human animal","termid":"MONDO:1011438"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephroma, ducks","secondary_identifiers":["OMIA:001113-8835"],"termid":"MONDO:1011560","xrefs":{"Monarch":{"xref_id":"1011560"}}}


id: PBO:0088767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA ligase Trl1","termid":"PBO:0088767"}


id: GO:0070914
data:
  {"annotated_genes":["SJAG_04150","SJAG_05197","SJAG_01262","SJAG_00272","SJAG_02334","SJAG_02818","SJAG_02199","SJAG_04190","SJAG_04877","SJAG_02200","SJAG_02828","SJAG_01648","SJAG_00208","SJAG_02182","SJAG_01010","SJAG_03898","SJAG_00814","SJAG_00729","SJAG_00863"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60750,66022,66914,67868,69013,70512,71793,77439,89869,95543,97920,99034,106164,107896,114822],"is_not":false,"summary":null,"term":"GO:0070914"},{"annotations":[111079,97139,78653,104761],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904161"}]},"cv_name":"biological_process","definition":"A DNA repair process that is initiated by an endonuclease that introduces a single-strand incision immediately 5' of a UV-induced damage site. UV-damage excision repair acts on both cyclobutane pyrimidine dimers (CPDs) and pyrimidine-pyrimidone 6-4 photoproducts (6-4PPs).","definition_xrefs":["GOC:mah","PMID:9619100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"},{"relation_name":"is_a","term_name":"cellular response to UV","termid":"GO:0034644"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02200":null,"SJAG_02334":null,"SJAG_02818":null,"SJAG_02828":null,"SJAG_03898":null,"SJAG_04150":null,"SJAG_04190":null,"SJAG_04877":null,"SJAG_05197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"UV-damage excision repair","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"AER","type":"related"},{"name":"UV-damaged DNA endonuclease-dependent excision repair","type":"exact"},{"name":"UVDE-dependent excision repair","type":"exact"},{"name":"UVER","type":"exact"},{"name":"alternative excision repair","type":"related"}],"termid":"GO:0070914","terms_by_termid":{"GO:0070914":null,"GO:1904161":null}}


id: PBO:0043922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CROCC pseudogene 1","termid":"PBO:0043922"}


id: GO:0043830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: fumarate + coenzyme M + coenzyme B = succinate + coenzyme M + coenzyme B + heterodisulfide.","definition_xrefs":["PMID:2509466"],"gene_count":0,"genotype_count":0,"name":"obsolete thiol-driven fumarate reductase activity (obsolete GO:0043830)","termid":"GO:0043830"}


id: GO:0008097
data:
  {"annotated_genes":["SJAG_00067","SJAG_01568","SJAG_00323","SJAG_04066"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72868,73887,74166,90785],"is_not":false,"summary":null,"term":"GO:0008097"}]},"cv_name":"molecular_function","definition":"Binding to a 5S ribosomal RNA, the smallest RNA constituent of a ribosome.","definition_xrefs":["GOC:jl","ISBN:0321000382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA binding","termid":"GO:0019843"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00067":null,"SJAG_00323":null,"SJAG_01568":null,"SJAG_04066":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"5S rRNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0008097","terms_by_termid":{"GO:0008097":null}}


id: GO:0071695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for an anatomical structure to attain its fully functional state.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental maturation","termid":"GO:0021700"},{"relation_name":"part_of","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anatomical structure maturation","termid":"GO:0071695"}


id: FYPO:0001304
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of myristoyl-CoA ligase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal myristoyl-CoA ligase activity","termid":"FYPO:0001303"},{"relation_name":"is_a","term_name":"decreased long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0005447","FYPO:0000002","FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased myristoyl-CoA ligase activity","synonyms":[{"name":"decreased myristoyl-CoA synthetase activity","type":"related"},{"name":"reduced myristoyl-CoA ligase activity","type":"exact"}],"termid":"FYPO:0001304"}


id: PBO:0055201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2626","termid":"PBO:0055201"}


id: PBO:0031099
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_M_phase","termid":"PBO:0031099"}


id: MONDO:0001922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abscess that is located in the ureter.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ureteral disorder","termid":"MONDO:0001926"},{"relation_name":"is_a","term_name":"abscess","termid":"MONDO:0005227"},{"relation_name":"is_a","term_name":"urinary tract infection","termid":"MONDO:0100338"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyoureter","secondary_identifiers":["DOID:1425","NCIT:C35666","SCTID:85884009","icd11.foundation:692694709","UMLS:C0034223","ICD9:593.89","MEDGEN:19600"],"synonyms":[{"name":"ureter abscess","type":"exact"}],"termid":"MONDO:0001922","xrefs":{"Monarch":{"xref_id":"0001922"}}}


id: MONDO:1011280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microphthalmia, isolated, with coloboma that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, isolated, with coloboma, non-human animal","termid":"MONDO:1010352"},{"relation_name":"is_a","term_name":"coloboma, dog","termid":"MONDO:1011214"},{"relation_name":"is_a","term_name":"microphthalmia, dog","termid":"MONDO:1011238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microphthalmia, isolated, with coloboma, dog","secondary_identifiers":["OMIA:002151-9615"],"termid":"MONDO:1011280","xrefs":{"Monarch":{"xref_id":"1011280"}}}


id: GO:0035933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of any glucocorticoid hormone into the circulatory system. Glucocorticoids are a class of steroid hormones that regulate a variety of physiological processes, in particular control of the concentration of glucose in blood.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corticosteroid hormone secretion","termid":"GO:0035930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"glucocorticoid secretion","termid":"GO:0035933"}


id: GO:0098633
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a collagen fibril.","definition_xrefs":["PMID:21421911","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix binding","termid":"GO:0050840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"collagen fibril binding","termid":"GO:0098633"}


id: SO:1000029
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An incomplete chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"deletion","termid":"SO:0000159"},{"relation_name":"is_a","term_name":"intrachromosomal_mutation","termid":"SO:1000028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal_deletion","secondary_identifiers":["http://en.wikipedia.org/wiki/Chromosomal_deletion"],"synonyms":[{"name":"(Drosophila)Df","type":"related"},{"name":"(bacteria)&ampDgr;","type":"related"},{"name":"(fungi)D","type":"related"},{"name":"chromosomal deletion","type":"exact"},{"name":"deficiency","type":"exact"}],"termid":"SO:1000029"}


id: PBO:0054241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1623","termid":"PBO:0054241"}


id: MONDO:0020362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inverse Marcus-Gunn phenomenon is a rare congenital synkinesis where jaw opening by the pterygoid muscle (during eating or yawning) causes eyelid drooping from inhibition of the oculomotor nerve to the levator palpebrae superioris. Familial occurrence has been reported.","definition_xrefs":["Orphanet:98951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"jaw-winking syndrome","termid":"MONDO:0007946"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverse Marcus-Gunn phenomenon","secondary_identifiers":["GARD:19608","MEDGEN:1784220","UMLS:C5548210","icd11.foundation:348052110"],"termid":"MONDO:0020362","xrefs":{"Monarch":{"xref_id":"0020362"}}}


id: GO:0051865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The ubiquitination by a protein of one or more of its own amino acid residues, or residues on an identical protein. Ubiquitination occurs on the lysine residue by formation of an isopeptide crosslink.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein ubiquitination","termid":"GO:0016567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein autoubiquitination","synonyms":[{"name":"protein auto-ubiquitination","type":"exact"},{"name":"protein auto-ubiquitinylation","type":"exact"},{"name":"protein autoubiquitinylation","type":"exact"},{"name":"protein self-ubiquitination","type":"exact"},{"name":"protein self-ubiquitinylation","type":"exact"}],"termid":"GO:0051865"}


id: MONDO:0018813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive B-cell non-Hodgkin lymphoma","termid":"MONDO:0017595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"high grade B-cell lymphoma with MYC and/ or BCL2 and/or BCL6 rearrangement","secondary_identifiers":["Orphanet:480541","GARD:21980","UMLS:C4524190","MEDGEN:1617477"],"termid":"MONDO:0018813","xrefs":{"Monarch":{"xref_id":"0018813"}}}


id: PBO:0056330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 11","termid":"PBO:0056330"}


id: PBO:0029084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_terbinafine","termid":"PBO:0029084"}


id: GO:0045923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving fatty acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid metabolic process","termid":"GO:0019217"},{"relation_name":"is_a","term_name":"positive regulation of lipid metabolic process","termid":"GO:0045834"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"fatty acid metabolic process","termid":"GO:0006631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of fatty acid metabolic process","synonyms":[{"name":"activation of fatty acid metabolic process","type":"narrow"},{"name":"positive regulation of fatty acid metabolism","type":"exact"},{"name":"stimulation of fatty acid metabolic process","type":"narrow"},{"name":"up regulation of fatty acid metabolic process","type":"exact"},{"name":"up-regulation of fatty acid metabolic process","type":"exact"},{"name":"upregulation of fatty acid metabolic process","type":"exact"}],"termid":"GO:0045923"}


id: GO:1903824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomere single strand break repair.","definition_xrefs":["GOC:TermGenie","PMID:24374808","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of single strand break repair","termid":"GO:1903517"},{"relation_name":"negatively_regulates","term_name":"telomere single strand break repair","termid":"GO:1903823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of telomere single strand break repair","synonyms":[{"name":"down regulation of single strand break repair in telomere","type":"exact"},{"name":"down regulation of telomere SSBR","type":"related"},{"name":"down regulation of telomere single strand break repair","type":"exact"},{"name":"down regulation of telomere single-strand break repair","type":"exact"},{"name":"down regulation of telomeric single strand break repair","type":"exact"},{"name":"down-regulation of single strand break repair in telomere","type":"exact"},{"name":"down-regulation of telomere SSBR","type":"related"},{"name":"down-regulation of telomere single strand break repair","type":"exact"},{"name":"down-regulation of telomere single-strand break repair","type":"exact"},{"name":"down-regulation of telomeric single strand break repair","type":"exact"},{"name":"downregulation of single strand break repair in telomere","type":"exact"},{"name":"downregulation of telomere SSBR","type":"related"},{"name":"downregulation of telomere single strand break repair","type":"exact"},{"name":"downregulation of telomere single-strand break repair","type":"exact"},{"name":"downregulation of telomeric single strand break repair","type":"exact"},{"name":"inhibition of single strand break repair in telomere","type":"narrow"},{"name":"inhibition of telomere SSBR","type":"related"},{"name":"inhibition of telomere single strand break repair","type":"narrow"},{"name":"inhibition of telomere single-strand break repair","type":"narrow"},{"name":"inhibition of telomeric single strand break repair","type":"narrow"},{"name":"negative regulation of single strand break repair in telomere","type":"exact"},{"name":"negative regulation of telomere SSBR","type":"related"},{"name":"negative regulation of telomere single-strand break repair","type":"exact"},{"name":"negative regulation of telomeric single strand break repair","type":"exact"}],"termid":"GO:1903824"}


id: MONDO:0009993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poorly circumscribed morphologic variant of rhabdomyosarcoma. It is characterized by the presence of primitive skeletal muscle differentiation in any stage of myogenesis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"embryonal rhabdomyosarcoma","secondary_identifiers":["ONCOTREE:ERMS","Orphanet:99757","EFO:0000437","SCTID:404051002","MedDRA:10065868","UMLS:C0206656","HP:0006743","GARD:4702","OMIM:268210","DOID:3246","ICD9:171.9","NCIT:C8971","MEDGEN:104910","ICDO:8910/3"],"synonyms":[{"name":"ERMS","type":"exact"},{"name":"RMSE1","type":"related"},{"name":"botryoid rhabdomyosarcoma (type of ERMS)","type":"related"},{"name":"embryonal rhabdomyosarcoma","type":"exact"},{"name":"embryonal rhabdomyosarcoma (disease)","type":"exact"},{"name":"rhabdomyosarcoma 1","type":"related"},{"name":"rhabdomyosarcoma chromosomal region","type":"related"},{"name":"rhabdomyosarcoma embryonal","type":"related"},{"name":"rhabdomyosarcoma, embryonal, 1","type":"related"},{"name":"rhabdomyosarcoma, embryonal, type 1","type":"exact"},{"name":"rhabdomyosarcoma, somatic","type":"exact"},{"name":"spindle cell rhabdomyosarcomas (type of ERMS)","type":"related"}],"termid":"MONDO:0009993","xrefs":{"Monarch":{"xref_id":"0009993"}}}


id: PBO:0059730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 4","termid":"PBO:0059730"}


id: MONDO:0012756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chromosomal anomaly characterized by developmental and language delays, mild intellectual disability, social impairments (autism spectrum disorders), mild variable dysmorphism and predisposition to obesity.","definition_xrefs":["Orphanet:261197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 16","termid":"MONDO:0016894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proximal 16p11.2 microdeletion syndrome","secondary_identifiers":["MEDGEN:461504","OMIM:611913","UMLS:C3150154","ICD9:758.39","SCTID:699307007","GARD:10740","DOID:0070515","MESH:C579850","SCTID:718227006","NCIT:C120408"],"synonyms":[{"name":"16p11.2 deletion syndrome","type":"related"},{"name":"Del(16)(p11.2)","type":"related"},{"name":"autism susceptibility 14A","type":"exact"},{"name":"autism, susceptibility to, 14A","type":"related"},{"name":"chromosome 16p11.2 deletion syndrome","type":"related"},{"name":"chromosome 16p11.2 deletion syndrome, 593-KB","type":"related"},{"name":"chromosome 16p11.2 deletion syndrome, 593kb","type":"exact"},{"name":"microdeletion 16p11.2","type":"related"},{"name":"monosomy 16p11.2","type":"related"},{"name":"proximal del(16)(p11.2)","type":"exact"},{"name":"proximal monosomy 16p11.2","type":"exact"}],"termid":"MONDO:0012756","xrefs":{"Monarch":{"xref_id":"0012756"}}}


id: GO:1990156
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing homohexameric DnaB helicase, and DnaG (a primase). Facilitates the unwinding of double-stranded DNA and the synthesis of RNA primer sequences during DNA replication and repair in Prokaryotes.","definition_xrefs":["GOC:bhm","PMID:14557266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase complex","termid":"GO:0033202"},{"relation_name":"part_of","term_name":"core primosome complex","termid":"GO:1990098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DnaB-DnaG complex","synonyms":[{"name":"DnaB-DnaG primosome complex","type":"related"}],"termid":"GO:1990156"}


id: GO:0016546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process during courtship where the male fly licks the genitalia of a stationary female fly with his proboscis. An example of this is found in Drosophila melanogaster.","definition_xrefs":["PMID:11092827","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male courtship behavior","termid":"GO:0008049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male courtship behavior, proboscis-mediated licking","synonyms":[{"name":"male courtship behavior, licking","type":"related"},{"name":"male courtship behaviour, licking","type":"related"},{"name":"male courtship behaviour, proboscis-mediated licking","type":"exact"}],"termid":"GO:0016546"}


id: PBO:0018275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVE domain (PUA-related) protein","termid":"PBO:0018275"}


id: MOD:01940
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks an asparagine and the following glutamic acid residue with the formation of (2-aminosuccinimidyl)pentanedioic acid and the release of ammonia.","definition_xrefs":["RESID:AA0593#ASN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-(2-aminosuccinimidyl)pentanedioic acid","termid":"MOD:01946"},{"relation_name":"is_a","term_name":"crosslinked L-asparagine residue","termid":"MOD:02042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-(2-aminosuccinimidyl)pentanedioic acid (Asn)","synonyms":[{"name":"(4S)-4-[(3S)-3-amino-2,5-dioxopyrrolidin-1-yl]-5-oxopentanoic acid","type":"exact"},{"name":"2-(2-aminosuccinimidyl)pentanedioic acid","type":"exact"},{"name":"aspartimide glutamic acid","type":"exact"}],"termid":"MOD:01940"}


id: PATO:0001678
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An efficiency quality inhering in a bearer by virtue of the bearer's having efficiency.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"efficiency","termid":"PATO:0001029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"efficient","termid":"PATO:0001678"}


id: PBO:0052127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily E regulatory subunit 5","termid":"PBO:0052127"}


id: GO:0072250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a metanephric glomerular visceral epithelial cell. A metanephric glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"podocyte cell fate commitment","termid":"GO:0072149"},{"relation_name":"is_a","term_name":"metanephric glomerular epithelial cell fate commitment","termid":"GO:0072315"},{"relation_name":"part_of","term_name":"metanephric podocyte differentiation","termid":"GO:0072248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric podocyte cell fate commitment","synonyms":[{"name":"metanephric glomerular visceral epithelial cell fate commitment","type":"exact"}],"termid":"GO:0072250"}


id: GO:0005925
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-substrate junction that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments. In insects focal adhesion has also been referred to as hemi-adherens junction (HAJ).","definition_xrefs":["PMID:26923917","PMID:15246682","PMID:19197329","PMID:23033047","PMID:16805308","ISBN:0815316208","ISBN:0124325653","GOC:aruk","GOC:bc","PMID:28796323","PMID:10419689","PMID:1643657","PMID:12191915","PMID:8314002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate junction","termid":"GO:0030055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"focal adhesion","secondary_identifiers":["GO:0008357","Wikipedia:Focal_adhesion","GO:0005926"],"synonyms":[{"name":"connecting hemi-adherens junction","type":"exact"},{"name":"focal contact","type":"exact"},{"name":"hemi-adherens junction","type":"exact"},{"name":"HAJ","type":"exact"},{"name":"adhesion plaque","type":"related"}],"termid":"GO:0005925"}


id: PBO:0065249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20B","termid":"PBO:0065249"}


id: GO:1904896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of an ESCRT complex into its constituent components.","definition_xrefs":["GO_REF:0000079","GOC:PARL","GOC:pad","GOC:TermGenie","PMID:21118109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ESCRT complex disassembly","synonyms":[{"name":"endosomal sorting complex required for transport disassembly","type":"exact"}],"termid":"GO:1904896"}


id: PBO:0002538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAP family protein (predicted)","termid":"PBO:0002538"}


id: GO:0007497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the posterior midgut over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"midgut development","termid":"GO:0007494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior midgut development","termid":"GO:0007497"}


id: GO:0015709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of thiosulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"thiosulfate transport","synonyms":[{"name":"thiosulphate transport","type":"exact"}],"termid":"GO:0015709"}


id: MONDO:0859163
data:
  {"annotated_genes":["SJAG_02812","SJAG_02189"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88391,88392],"is_not":false,"summary":null,"term":"MONDO:0859163"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02189":null,"SJAG_02812":null},"genotype_count":0,"is_obsolete":false,"name":"Faundes-Banka syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5543554","OMIM:619376","MEDGEN:1782083"],"termid":"MONDO:0859163","terms_by_termid":{"MONDO:0859163":null},"xrefs":{"Monarch":{"xref_id":"0859163"}}}


id: PBO:0063266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 12","termid":"PBO:0063266"}


id: FYPO:0000831
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of actinomycin D than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002682","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"resistance to actinomycin D","synonyms":[{"name":"resistance to actinomycin D during mitotic cell cycle","type":"related"},{"name":"resistance to actinomycin D during vegetative growth","type":"exact"},{"name":"resistant to actinomycin D","type":"exact"}],"termid":"FYPO:0000831"}


id: PBO:0011125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein]reductase (predicted)","termid":"PBO:0011125"}


id: GO:0034701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a tripeptide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0008233","GO:0016787","GO:0140096"],"is_obsolete":false,"name":"tripeptidase activity","termid":"GO:0034701"}


id: MONDO:0002502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete giant cell glioblastoma (obsolete MONDO:0002502)","termid":"MONDO:0002502","xrefs":{"Monarch":{"xref_id":"0002502"}}}


id: PBO:0044539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAN domain BMP antagonist family member 5","termid":"PBO:0044539"}


id: GO:0030388
data:
  {"annotated_genes":["SJAG_00605"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79615],"is_not":false,"summary":null,"term":"GO:0030388"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving fructose 1,6-bisphosphate, also known as FBP. The D enantiomer is a metabolic intermediate in glycolysis and gluconeogenesis.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00605":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fructose 1,6-bisphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"fructose 1,6-bisphosphate metabolism","type":"exact"}],"termid":"GO:0030388","terms_by_termid":{"GO:0030388":null}}


id: GO:0061432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a methionine stimulus.","definition_xrefs":["PMID:7891681","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to methionine (obsolete GO:0061432)","termid":"GO:0061432"}


id: GO:0046695
data:
  {"annotated_genes":["SJAG_04274","SJAG_02927"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58497,63957],"is_not":false,"summary":null,"term":"GO:0046695"}]},"cv_name":"cellular_component","definition":"A SAGA-type histone acetyltransferase complex that contains a smaller form of Spt7 (lacking the SPT8 binding region) than the fungal SAGA complex, and consequently lacks Spt8. The complex is involved in the yeast retrograde response pathway, which is important for gene expression changes during mitochondrial dysfunction.","definition_xrefs":["PMID:33864814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SAGA-type complex","termid":"GO:0070461"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02927":null,"SJAG_04274":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SLIK (SAGA-like) complex","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"SAGA (alt) complex","type":"exact"},{"name":"SALSA complex","type":"exact"},{"name":"SLIK/SALSA complex","type":"exact"}],"termid":"GO:0046695","terms_by_termid":{"GO:0046695":null}}


id: PBO:0069618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 895, pseudogene","termid":"PBO:0069618"}


id: PBO:0086457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative metallo-dependent hydrolase superfamily protein; similar to AMP deaminases but lacks key catalytic residues and does not rescue purine nucleotide metabolic defect of quadruple aah1 ade8 amd1 his1 mutant; may regulate purine nucleotide homeostasis as overexpression in an AMD1 strain grown in adenine results in greatly reduced GDP and GTP intracellular levels; not an essential gene; YJL070C has a paralog, YBR284W, that arose from the whole genome duplication","termid":"PBO:0086457"}


id: MONDO:0008435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Somatomedin, embryonic","secondary_identifiers":["MEDGEN:401103","OMIM:182400","UMLS:C1866879"],"synonyms":[{"name":"Somatomedin, embryonic","type":"exact"}],"termid":"MONDO:0008435","xrefs":{"Monarch":{"xref_id":"0008435"}}}


id: PBO:0067447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 569, pseudogene","termid":"PBO:0067447"}


id: MONDO:0025708
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88377,88378],"is_not":false,"summary":null,"term":"MONDO:0025708"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megacystis-microcolon-intestinal hypoperistalsis syndrome","termid":"MONDO:0025986"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"megacystis-microcolon-intestinal hypoperistalsis syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619351","GARD:16447","UMLS:C5543476","MEDGEN:1788773"],"synonyms":[{"name":"MMIHS2","type":"exact"}],"termid":"MONDO:0025708","terms_by_termid":{"MONDO:0025708":null},"xrefs":{"Monarch":{"xref_id":"0025708"}}}


id: MOD:02047
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains a glycine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked glycine residue","synonyms":[{"name":"XlnkGly","type":"exact"}],"termid":"MOD:02047"}


id: GO:0047950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 glutathione + O2 = glutathione disulfide + H2O2.","definition_xrefs":["RHEA:24112","EC:1.8.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glutathione oxidase activity","secondary_identifiers":["MetaCyc:GLUTATHIONE-OXIDASE-RXN","KEGG_REACTION:R00120"],"synonyms":[{"name":"glutathione:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047950"}


id: PBO:0087159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA pol III transcription initiation factor complex (TFIIIC) subunit; part of the TauA globular domain of TFIIIC that binds DNA at the BoxA promoter sites of tRNA and similar genes; TFC7 has a paralog, YNL108C, that arose from the whole genome duplication","termid":"PBO:0087159"}


id: PBO:0027764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_prospore_membrane_during_meiosis_II","termid":"PBO:0027764"}


id: PBO:0003625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Mrd1 (predicted)","termid":"PBO:0003625"}


id: GO:0016509
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain (3S)-3-hydroxy fatty acyl-CoA + NAD+ = a long-chain 3-oxo-fatty acyl-CoA + H+ + NADH. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["RHEA:52656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-hydroxyacyl-CoA dehydrogenase (NAD+) activity","termid":"GO:0003857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"long-chain-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity","secondary_identifiers":["EC:1.1.1.211","MetaCyc:1.1.1.211-RXN"],"synonyms":[{"name":"LCHAD","type":"related"},{"name":"beta-hydroxyacyl-CoA dehydrogenase activity","type":"related"},{"name":"long-chain 3-hydroxyacyl coenzyme A dehydrogenase activity","type":"related"},{"name":"long-chain-(S)-3-hydroxyacyl-CoA:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0016509"}


id: PBO:0050669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSPA5 divergent transcript","termid":"PBO:0050669"}


id: PBO:0073456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant associated 2","termid":"PBO:0073456"}


id: GO:0046025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 S-adenosyl-L-methionine + precorrin-6Y = 2 S-adenosyl-L-homocysteine + precorrin-8X + CO2.","definition_xrefs":["EC:2.1.1.132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"precorrin-6Y C5,15-methyltransferase (decarboxylating) activity","secondary_identifiers":["MetaCyc:2.1.1.132-RXN","RHEA:17477"],"synonyms":[{"name":"S-adenosyl-L-methionine:1-precorrin-6Y C5,15-methyltransferase (C-12-decarboxylating)","type":"related"},{"name":"precorrin-6 methyltransferase activity","type":"broad"},{"name":"precorrin-6Y methylase activity","type":"broad"}],"termid":"GO:0046025"}


id: PBO:0088570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO activating enzyme E1-type Uba2","termid":"PBO:0088570"}


id: PBO:0080227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitrin","termid":"PBO:0080227"}


id: GO:0019786
data:
  {"annotated_genes":["SJAG_01283"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78791],"is_not":false,"summary":null,"term":"GO:0019786"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: [protein]-C-terminal L-amino acid-glycyl-phosphatidylethanolamide + H2O = [protein]-C-terminal L-amino acid-glycine + a 1,2-diacyl-sn-glycero-3-phosphoethanolamine. An example of this reaction is the removal of ATG8 from membranes to which it is covalently linked to a phosphatidylethanolamid via its terminal glycine residue.","definition_xrefs":["PMID:22240591","PMID:22652539","PMID:28330855","PMID:28901328","PMID:2882172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"protein-phosphatidylethanolamide deconjugating activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"APG8-PE hydrolase","type":"related"},{"name":"APG8-specific protease activity","type":"narrow"},{"name":"ATG8-PE deconjugation activity","type":"narrow"},{"name":"ATG8-PE hydrolase activity","type":"narrow"},{"name":"Atg8-specific peptidase activity","type":"narrow"},{"name":"Atg8-specific protease activity","type":"exact"}],"termid":"GO:0019786","terms_by_termid":{"GO:0019786":null}}


id: PATO:0000205
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000205 relative locomotor_activity (obsolete PATO:0000205)","termid":"PATO:0000205"}


id: MONDO:0000965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign adipose tissue neoplasm of the liver.","definition_xrefs":["NCIT:C5750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"},{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"},{"relation_name":"is_a","term_name":"hepatobiliary benign neoplasm","termid":"MONDO:0859689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"liver lipoma","secondary_identifiers":["UMLS:C1333970","DOID:10190","MEDGEN:232277"],"synonyms":[{"name":"hepatic lipoma","type":"exact"},{"name":"lipoma of liver","type":"exact"},{"name":"lipoma of the liver","type":"exact"},{"name":"liver lipoma","type":"exact"}],"termid":"MONDO:0000965","xrefs":{"Monarch":{"xref_id":"0000965"}}}


id: PBO:0048008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRMD6 antisense RNA 2","termid":"PBO:0048008"}


id: MONDO:0033310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 31","secondary_identifiers":["OMIM:617761","UMLS:C4540355","GARD:16251","DOID:0080277","MEDGEN:1618082"],"synonyms":[{"name":"JBTS31","type":"related"},{"name":"Joubert syndrome 31","type":"exact"}],"termid":"MONDO:0033310","xrefs":{"Monarch":{"xref_id":"0033310"}}}


id: PBO:0042776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 85 like","termid":"PBO:0042776"}


id: PBO:0026867
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_at_centromere","termid":"PBO:0026867"}


id: MONDO:0013202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of Waardenburg syndrome type 4 (Waardenburg-Shah syndrome) caused by mutations in SOX10.","direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg-Shah syndrome","termid":"MONDO:0019518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0000426"],"is_obsolete":false,"name":"Waardenburg syndrome type 4C","secondary_identifiers":["GARD:15642","DOID:0110955","MEDGEN:413310","MESH:C567679","UMLS:C2750452","OMIM:613266"],"synonyms":[{"name":"WS4C","type":"exact"},{"name":"Waardenburg syndrome type 4C","type":"exact"},{"name":"Waardenburg syndrome type IVC","type":"exact"},{"name":"Waardenburg syndrome with Hirschsprung disease type 4C","type":"exact"},{"name":"Waardenburg syndrome with Hirschsprung disease, type 4C","type":"related"},{"name":"Waardenburg syndrome, type 4C","type":"related"}],"termid":"MONDO:0013202","xrefs":{"Monarch":{"xref_id":"0013202"}}}


id: GO:0038009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction by the movement of a signaling receptor from the plasma membrane to the inside of the cell. Receptor internalization can have a positive or negative effect on a signaling pathway.","definition_xrefs":["GOC:bf","PMID:17011816","GOC:signaling","PMID:19696798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"receptor internalization","termid":"GO:0031623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"regulation of signal transduction by receptor internalization","synonyms":[{"name":"regulation of signaling pathway by receptor endocytosis","type":"exact"}],"termid":"GO:0038009"}


id: MONDO:0850283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asthma that is characterized by severe and sudden onset of increasing wheezing, airways closing, smooth muscle contraction, mucus plugging and lower airway edema that may be reversible upon treatment.","definition_xrefs":["DOID:0080810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asthma","termid":"MONDO:0004979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute asthma","secondary_identifiers":["MEDGEN:578946","UMLS:C0349790"],"termid":"MONDO:0850283","xrefs":{"Monarch":{"xref_id":"0850283"}}}


id: GO:0046538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (2R)-2-phosphoglycerate = (2R)-3-phosphoglycerate; this reaction mechanism uses 2,3-bisphosphoglycerate as a phosphate donor.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity (obsolete GO:0046538)","termid":"GO:0046538"}


id: PR:O94426
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC660.06 gene.","definition_xrefs":["UniProtKB:O94426","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain-containing protein C660.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC660.06","synonyms":[{"name":"Spom972h-SPBC660.06","type":"exact"}],"termid":"PR:O94426"}


id: GO:0052476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of symbiont MAP kinase-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of defense-related symbiont MAP kinase-mediated signal transduction pathway (obsolete GO:0052476)","synonyms":[{"name":"negative regulation by organism of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"exact"},{"name":"negative regulation by organism of defense-related symbiont MAPK-mediated signal transduction pathway","type":"exact"},{"name":"negative regulation by organism of defense-related symbiont mitogen-activated protein kinase-mediated signal transduction pathway","type":"exact"},{"name":"suppression by organism of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"exact"}],"termid":"GO:0052476"}


id: MONDO:0015828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete uterovaginal malformation (obsolete MONDO:0015828)","secondary_identifiers":["Orphanet:180062"],"termid":"MONDO:0015828","xrefs":{"Monarch":{"xref_id":"0015828"}}}


id: GO:0071398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fatty acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to fatty acid","termid":"GO:0071398"}


id: GO:0043331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a double-stranded RNA stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to dsRNA","synonyms":[{"name":"response to double-stranded RNA","type":"exact"}],"termid":"GO:0043331"}


id: MONDO:0006382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma arising from the thyroid gland showing only limited evidence of follicular cell differentiation. Microscopically, the adenocarcinoma cells are arranged in insular, solid, and trabecular patterns. There is associated necrosis, and vascular invasion. The prognosis depends on the tumor stage, complete or partial surgical removal of the tumor, and the degree of response to radioactive iodine therapy (adapted from WHO Tumors of Endocrine Organs, IARC Press, Lyon 2004)","definition_xrefs":["NCIT:C6040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"poorly differentiated thyroid gland carcinoma","secondary_identifiers":["ICDO:8337/3","EFO:1000489","MEDGEN:266094","UMLS:C1266050","ONCOTREE:THPD"],"synonyms":[{"name":"insular carcinoma","type":"exact"},{"name":"poorly differentiated carcinoma of the thyroid gland","type":"exact"},{"name":"poorly differentiated carcinoma of thyroid gland","type":"exact"},{"name":"poorly differentiated thyroid cancer","type":"related"},{"name":"poorly differentiated thyroid carcinoma","type":"exact"},{"name":"poorly differentiated thyroid gland cancer","type":"exact"},{"name":"poorly differentiated thyroid gland carcinoma","type":"exact"},{"name":"thyroid gland poorly differentiated carcinoma","type":"exact"}],"termid":"MONDO:0006382","xrefs":{"Monarch":{"xref_id":"0006382"}}}


id: GO:0033189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin A stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vitamin A","synonyms":[{"name":"response to retinol","type":"narrow"}],"termid":"GO:0033189"}


id: MONDO:0019917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maternal uniparental disomy of chromosome 20 (UPD 20) is a very rare chromosomal anomaly in which both copies of chromosome 20 are inherited from the mother. The main feature described is prenatal and postnatal growth retardation. Microcephaly, minor dysmorphic features and psychomotor developmental delay have been occasionally reported. Maternal UPD20 is most often ascertained by a mosaic trisomy 20 pregnancy.","definition_xrefs":["Orphanet:96186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 20 disorder","termid":"MONDO:0700025"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal uniparental disomy of chromosome 20","secondary_identifiers":["icd11.foundation:700797720","OMIM:617352","SCTID:715735007","UMLS:C4275029","DOID:0111714","GARD:16849","MEDGEN:909388"],"synonyms":[{"name":"MBCS","type":"related"},{"name":"MULCHANDANI-BHOJ-CONLIN syndrome","type":"related"},{"name":"UPD(20)mat","type":"exact"},{"name":"maternal UPD(20)","type":"exact"},{"name":"maternal uniparental disomy of chromosome type 20","type":"exact"},{"name":"uniparental disomy, maternal, chromosome 20","type":"related"}],"termid":"MONDO:0019917","xrefs":{"Monarch":{"xref_id":"0019917"}}}


id: PBO:0060044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 32","termid":"PBO:0060044"}


id: PBO:0064939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyglutamine binding protein 1","termid":"PBO:0064939"}


id: PBO:0045628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 40 (pseudogene)","termid":"PBO:0045628"}


id: GO:1903551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of extracellular vesicular exosome assembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24105262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"extracellular exosome assembly","termid":"GO:0071971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of extracellular exosome assembly","synonyms":[{"name":"regulation of extracellular vesicular exosome assembly","type":"exact"}],"termid":"GO:1903551"}


id: CHEBI:30812
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron dichloride","termid":"CHEBI:30812"}


id: GO:0141157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of  host exocytosis. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:17185412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host vesicle-mediated transport","termid":"GO:1990215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host exocytosis","termid":"GO:0141157"}


id: MONDO:0000559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0000559 (obsolete MONDO:0000559)","termid":"MONDO:0000559","xrefs":{"Monarch":{"xref_id":"0000559"}}}


id: PBO:0085766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase of unknown cellular role; putative serine/threonine kinase; expression is induced during mild heat stress; deletion mutants are hypersensitive to copper sulphate and resistant to sorbate; interacts with an N-terminal fragment of Sst2p","termid":"PBO:0085766"}


id: GO:1903267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ornithine catabolic process.","definition_xrefs":["GOC:TermGenie","PMID:12679340","GOC:bhm","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of ornithine catabolic process","termid":"GO:1903266"},{"relation_name":"negatively_regulates","term_name":"L-ornithine catabolic process","termid":"GO:0006593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"negative regulation of ornithine catabolic process","synonyms":[{"name":"down regulation of ornithine breakdown","type":"exact"},{"name":"down regulation of ornithine catabolic process","type":"exact"},{"name":"down regulation of ornithine catabolism","type":"exact"},{"name":"down regulation of ornithine degradation","type":"exact"},{"name":"down-regulation of ornithine breakdown","type":"exact"},{"name":"down-regulation of ornithine catabolic process","type":"exact"},{"name":"down-regulation of ornithine catabolism","type":"exact"},{"name":"down-regulation of ornithine degradation","type":"exact"},{"name":"downregulation of ornithine breakdown","type":"exact"},{"name":"downregulation of ornithine catabolic process","type":"exact"},{"name":"downregulation of ornithine catabolism","type":"exact"},{"name":"downregulation of ornithine degradation","type":"exact"},{"name":"inhibition of ornithine breakdown","type":"narrow"},{"name":"inhibition of ornithine catabolic process","type":"narrow"},{"name":"inhibition of ornithine catabolism","type":"narrow"},{"name":"inhibition of ornithine degradation","type":"narrow"},{"name":"negative regulation of ornithine breakdown","type":"exact"},{"name":"negative regulation of ornithine catabolism","type":"exact"},{"name":"negative regulation of ornithine degradation","type":"exact"}],"termid":"GO:1903267"}


id: PBO:0064408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 3","termid":"PBO:0064408"}


id: PBO:0063647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 4","termid":"PBO:0063647"}


id: PBO:0029621
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_hydroxyurea","termid":"PBO:0029621"}


id: GO:1901816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-zeacarotene.","definition_xrefs":["GOC:yaf","UniPathway:UPA00805","GOC:TermGenie","PMID:3710717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid metabolic process","termid":"GO:0016116"},{"relation_name":"is_a","term_name":"carotene metabolic process","termid":"GO:0016119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"beta-zeacarotene metabolic process","synonyms":[{"name":"beta-zeacarotene metabolism","type":"exact"}],"termid":"GO:1901816"}


id: PBO:0028320
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0028320"}


id: FYPO:0006485
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4-bisphosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular phosphoinositide level","termid":"FYPO:0005588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular phosphatidylinositol-3,4-bisphosphate level","synonyms":[{"name":"decreased cellular 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate level","type":"exact"},{"name":"decreased cellular PI(3,4)P2 level","type":"exact"},{"name":"decreased cellular phosphatidylinositol-3,4-bisphosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphatidylinositol-3,4-bisphosphate level during vegetative growth","type":"exact"},{"name":"reduced cellular phosphatidylinositol-3,4-bisphosphate level","type":"exact"}],"termid":"FYPO:0006485"}


id: GO:0031002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular structure consisting of parallel, hexagonally arranged actin tubules, comprising filamentous actin and associated proteins. Actin rod structures are found in diverse organisms, having been observed in spores of Dictyostelium discoideum, Drosophila melanogaster oocytes, as well as in numerous animal cells under stress conditions.","definition_xrefs":["PMID:19459188","GOC:krc","PMID:22623727","PMID:27535426","PMID:11858703","PMID:7820870","PMID:24813767","GOC:kp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle","termid":"GO:0032432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"actin rod","termid":"GO:0031002"}


id: PBO:0003498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermine family transporter (predicted)","termid":"PBO:0003498"}


id: FYPO:0000828
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which entry into the G1 phase of the mitotic cell cycle (exit from mitosis) begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G1 phase progression","termid":"FYPO:0000602"},{"relation_name":"is_a","term_name":"premature cell cycle phase transition","termid":"FYPO:0000827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"premature mitotic G1 phase entry","synonyms":[{"name":"accelerated entry into G1","type":"related"},{"name":"advanced mitotic G1 phase entry","type":"exact"},{"name":"advanced mitotic G1 progression","type":"related"},{"name":"mitotic cell cycle advance in G1","type":"related"},{"name":"premature G1 phase entry during mitotic cell cycle","type":"exact"},{"name":"premature exit from mitosis","type":"exact"},{"name":"premature mitotic G1 phase entry during vegetative growth","type":"exact"}],"termid":"FYPO:0000828"}


id: GO:0018533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of peptidyl-cysteine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetylation","termid":"GO:0006473"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-cysteine acetylation","termid":"GO:0018533"}


id: PBO:0000895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Rst2","termid":"PBO:0000895"}


id: GO:0002367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus contributing to an immune response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["ISBN:0781735149","GO_REF:0000022","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"},{"relation_name":"is_a","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"},{"relation_name":"part_of","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"cytokine production involved in immune response","secondary_identifiers":["GO:0002374","GO:0002375"],"synonyms":[{"name":"cytokine biosynthetic process involved in immune response","type":"narrow"},{"name":"cytokine production during immune response","type":"related"},{"name":"cytokine secretion during immune response","type":"related"},{"name":"cytokine secretion involved in immune response","type":"related"}],"termid":"GO:0002367"}


id: FYPO:0000949
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell does not contain a septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"},{"relation_name":"output_of","term_name":"abolished septum assembly","termid":"FYPO:0000272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000032","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"aseptate","synonyms":[{"name":"absent septum","type":"exact"},{"name":"aseptate during mitotic cell cycle","type":"related"},{"name":"aseptate during vegetative growth","type":"exact"}],"termid":"FYPO:0000949"}


id: FYPO:0007659
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which cells in a population do not divide at a uniform size, although each cell divides to form equal-size daughter cells, which then subsequently divide at a normal size. Within one population, some cells may be larger and others smaller than normal (i.e. compared to wild-type cells under the same conditions) upon the first division. Daughter cells that are larger than normal upon formation divide earlier, and smaller-formed daughter cells divide later, than cells formed at a normal size.","definition_xrefs":["PomBase:mah","PomBase:vw","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variable cell size at division","termid":"FYPO:0007474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003"],"is_obsolete":false,"name":"variable cell size at division with subsequent division at normal size","synonyms":[{"name":"increased variability of cell size in a vegetative population, with subsequent division at normal size","type":"exact"},{"name":"variable cell length at entry into mitosis followed by equal cell division","type":"exact"},{"name":"variable cell size at division with normal cell size homeostasis","type":"exact"},{"name":"variable cell size at division with subsequent division at normal size during mitotic cell cycle","type":"related"},{"name":"variable cell size at division with subsequent division at normal size during vegetative growth","type":"exact"},{"name":"variable vegetative cell size at division with subsequent division at normal size","type":"exact"}],"termid":"FYPO:0007659"}


id: PBO:0027767
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cytosolic_calcium_level","termid":"PBO:0027767"}


id: MONDO:0017572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tick-borne encephalitis is caused by an arbovirus of the Flaviviridae family (tick-borne encephalitis virus, TBEV), transmitted principally by the bite of the Ixodes ricinus tick. The symptomology is biphasic, with the initial phase being associated with a flu-like illness and the second phase (occurring in less than 10% of patients) with symptoms of meningitis or, more rarely, meningoencephalitis.","definition_xrefs":["Orphanet:297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral encephalitis","termid":"MONDO:0006009"},{"relation_name":"is_a","term_name":"tick-borne infectious disease","termid":"MONDO:0025294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tick-borne encephalitis","secondary_identifiers":["MESH:D004675","NCIT:C34579","ICD9:063.2","EFO:1001309","GARD:5216","MedDRA:10043848","UMLS:C0014061","DOID:0050175","icd11.foundation:835129952","MEDGEN:4034"],"synonyms":[{"name":"Far Eastern TBE","type":"exact"},{"name":"Russian spring-summer encephalitis","type":"exact"},{"name":"Siberian tick-borne encephalitis","type":"exact"},{"name":"TBE","type":"exact"},{"name":"Tick-borne viral encephalitis","type":"exact"},{"name":"Western European tick-borne encephalitis","type":"exact"},{"name":"central European encephalitis","type":"exact"},{"name":"taiga encephalitis","type":"exact"},{"name":"west-Siberian encephalitis","type":"exact"}],"termid":"MONDO:0017572","xrefs":{"Monarch":{"xref_id":"0017572"}}}


id: GO:0047236
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methylazoxymethanol + UDP-D-glucose = H+ + cycasin + UDP.","definition_xrefs":["MetaCyc:2.4.1.171-RXN","EC:2.4.1.171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methyl-ONN-azoxymethanol beta-D-glucosyltransferase activity","secondary_identifiers":["RHEA:20205"],"synonyms":[{"name":"UDP-glucose:methyl-ONN-azoxymethanol beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose-methylazoxymethanol glucosyltransferase activity","type":"related"},{"name":"cycasin synthase activity","type":"related"},{"name":"methyl-ONN-azoxymethanol glucosyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucose-methylazoxymethanol glucosyltransferase activity","type":"related"}],"termid":"GO:0047236"}


id: PBO:0038915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor F5","termid":"PBO:0038915"}


id: PBO:0085901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may be involved in positive regulation of 1,3-beta-glucan synthesis and the Pkc1p-MAPK pathway; multicopy suppressor of temperature-sensitive mutations in CDC24 and CDC42, and of mutations in BEM4; potential Cdc28p substrate; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0085901"}


id: PBO:0068335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 43","termid":"PBO:0068335"}


id: GO:2001065
data:
  {"annotated_genes":["SJAG_03535"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[120552],"is_not":false,"summary":null,"term":"GO:2001065"}]},"cv_name":"molecular_function","definition":"Binding to mannan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03535":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mannan binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mannoglycan binding","type":"related"}],"termid":"GO:2001065","terms_by_termid":{"GO:2001065":null}}


id: GO:0140131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lymphocyte chemotaxis.","definition_xrefs":["PMID:19255442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte chemotaxis","termid":"GO:0002690"},{"relation_name":"is_a","term_name":"regulation of lymphocyte chemotaxis","termid":"GO:1901623"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte migration","termid":"GO:2000403"},{"relation_name":"positively_regulates","term_name":"lymphocyte chemotaxis","termid":"GO:0048247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphocyte chemotaxis","termid":"GO:0140131"}


id: MONDO:1011838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital copper deficiency, non-human animal","secondary_identifiers":["OMIA:000226"],"termid":"MONDO:1011838","xrefs":{"Monarch":{"xref_id":"1011838"}}}


id: PBO:0042265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 6B","termid":"PBO:0042265"}


id: MONDO:0957584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 85","secondary_identifiers":["DOID:0070584","UMLS:C5882685","MEDGEN:1849976","OMIM:620490"],"termid":"MONDO:0957584","xrefs":{"Monarch":{"xref_id":"0957584"}}}


id: GO:0033396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-alanine via the intermediate 3-ureidopropionate.","definition_xrefs":["GOC:mah","MetaCyc:PWY-3982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-alanine biosynthetic process","termid":"GO:0019483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"beta-alanine biosynthetic process via 3-ureidopropionate","synonyms":[{"name":"beta-alanine anabolism via 3-ureidopropionate","type":"exact"},{"name":"beta-alanine formation via 3-ureidopropionate","type":"exact"},{"name":"beta-alanine synthesis via 3-ureidopropionate","type":"exact"}],"termid":"GO:0033396"}


id: MOD:00972
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to a monobrominated L-phenylalanine, such as L-2'-bromophenylalanine.","definition_xrefs":["Unimod:340#F"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated phenylalanine","termid":"MOD:01066"},{"relation_name":"is_a","term_name":"monobrominated residue","termid":"MOD:01912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monobrominated L-phenylalanine","synonyms":[{"name":"Br1Phe","type":"exact"},{"name":"Bromo","type":"related"},{"name":"bromination","type":"related"}],"termid":"MOD:00972"}


id: PBO:0070554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 20","termid":"PBO:0070554"}


id: GO:0048027
data:
  {"annotated_genes":["SJAG_01249"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102385],"is_not":false,"summary":null,"term":"GO:0048027"}]},"cv_name":"molecular_function","definition":"Binding to an mRNA molecule at its 5' untranslated region.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA binding","termid":"GO:0003729"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"mRNA 5'-UTR binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mRNA 5' UTR binding","type":"exact"}],"termid":"GO:0048027","terms_by_termid":{"GO:0048027":null}}


id: FYPO:0002684
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which germinating spores show increased sensitivity to phlorizin. Cells stop growing (and may die) at a concentration of phlorizin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical","termid":"FYPO:0002683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to phlorizin during spore germination","synonyms":[{"name":"hypersensitive to phlorizin","type":"exact"},{"name":"sensitive to phloridzin during spore germination","type":"exact"}],"termid":"FYPO:0002684"}


id: PBO:0060174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTUS2 antisense RNA 1","termid":"PBO:0060174"}


id: PBO:0113185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid-binding ER tricalbin involved in ER-plasma membrane tethering; one of at least 7 proteins (Ice2p, Ist2p, Scs2/Scs22p, Tcb1-Tcb3p) that affect cER tethering and contact with the plasma membrane; regulates PI4P levels by controlling access of Sac1p to its substrate PI4P in the PM; regulates PM phospholipid homeostasis; involved in intermembrane phospholipid transfer; also localizes to the mitochondria in a phosphorylated state and is enriched in bud membranes; mRNA is targeted to the bud tip","termid":"PBO:0113185"}


id: GO:0040015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of growth of an organism to reach its usual body size.","definition_xrefs":["GOC:ems","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organism growth","termid":"GO:0040014"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"multicellular organism growth","termid":"GO:0035264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of multicellular organism growth","synonyms":[{"name":"negative regulation of body growth","type":"exact"},{"name":"negative regulation of body size","type":"exact"}],"termid":"GO:0040015"}


id: GO:0010689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the synthesis of RNA from ribosomal protein genes by RNA polymerase II, originating at an RNA polymerase II promoter, as a result of a chemical stimulus.","definition_xrefs":["GOC:tb","GOC:dph","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ribosomal protein gene transcription by RNA polymerase II","termid":"GO:0010688"},{"relation_name":"part_of","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006355","GO:0006351"],"is_obsolete":false,"name":"negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to chemical stimulus","termid":"GO:0010689"}


id: GO:0102487
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dUTP + 2 H2O = dUMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dUTP phosphohydrolase activity (obsolete GO:0102487)","termid":"GO:0102487"}


