# terms

id: PBO:0111858
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ypt subfamily","termid":"PBO:0111858"}


id: PBO:0085302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pho85p cyclin; recruits, activates, and targets Pho85p cyclin-dependent protein kinase to its substrate; PCL10 has a paralog, PCL8, that arose from the whole genome duplication","termid":"PBO:0085302"}


id: PBO:0002690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PvGal biosynthesis protein Pvg5","termid":"PBO:0002690"}


id: GO:0071302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B2 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin B2","termid":"GO:0033274"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin B2","synonyms":[{"name":"cellular response to riboflavin","type":"exact"}],"termid":"GO:0071302"}


id: PBO:0027576
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_endoplasmic_reticulum","termid":"PBO:0027576"}


id: PBO:0065012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 16","termid":"PBO:0065012"}


id: PBO:0085375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PINc domain endonuclease; required for early cleavage of 35S pre-rRNA and maturation of 18S rRNA; component of the SSU (small subunit) processome involved in 40S ribosomal subunit biogenesis; copurifies with Faf1p","termid":"PBO:0085375"}


id: FYPO:0002245
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of monosaccharide binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal monosaccharide binding","termid":"FYPO:0002245"}


id: PBO:0002200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retromer complex subunit Vps29","termid":"PBO:0002200"}


id: MONDO:0015779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"45,X/46,XY mixed gonadal dysgenesis (45,X/46,XY MGD) is a disorder of sex development (DSD) associated with a numerical sex chromosome abnormality resulting from Y-chromosome mosaicism and leading to abnormal gonadal development.","definition_xrefs":["Orphanet:1772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonadal dysgenesis","termid":"MONDO:0001967"},{"relation_name":"is_a","term_name":"sex chromosome disorder of sex development","termid":"MONDO:0017975"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"45,X/46,XY mixed gonadal dysgenesis","secondary_identifiers":["NANDO:2200388","NCIT:C120199","GARD:18747","DOID:0080656"],"synonyms":[{"name":"45,X/46,XY MGD","type":"exact"},{"name":"45,X/46,XY disorder of Sex development","type":"exact"},{"name":"45,X/46,XY gonadal dysgenesis","type":"exact"},{"name":"45,X0/46,XY MGD","type":"exact"},{"name":"45,X0/46,XY mixed gonadal dysgenesis","type":"exact"},{"name":"Mixed gonadal dysgenesis","type":"exact"},{"name":"XY/X0","type":"exact"}],"termid":"MONDO:0015779","xrefs":{"Monarch":{"xref_id":"0015779"}}}


id: PBO:0076605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 24","termid":"PBO:0076605"}


id: PBO:0042787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 152","termid":"PBO:0042787"}


id: PBO:0057385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548b","termid":"PBO:0057385"}


id: PBO:0088160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"v-SNARE binding protein; facilitates specific protein retrieval from a late endosome to the Golgi; modulates arginine uptake, possible role in mediating pH homeostasis between the vacuole and plasma membrane H(+)-ATPase; contributes to prion curing; preferentially expressed after severe ethanol stress","termid":"PBO:0088160"}


id: PBO:0042936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ChaC glutathione specific gamma-glutamylcyclotransferase 2","termid":"PBO:0042936"}


id: MONDO:0021013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of trichothiodystrophy caused by mutation(s) in the MPLKIP gene, encoding M-phase-specific PLK1-interacting protein.","definition_xrefs":["NCIT:C146899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichothiodystrophy","termid":"MONDO:0018053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichothiodystrophy 4, nonphotosensitive","secondary_identifiers":["UMLS:C1313961","OMIM:234050","GARD:5271","ICD9:704.8","ICD9:783.43","Orphanet:75790","DOID:0050528","MEDGEN:272036","SCTID:403796005"],"synonyms":[{"name":"Amish brittle hair brain syndrome","type":"related"},{"name":"BIDS syndrome","type":"related"},{"name":"MPLKIP nonphotosensitive trichothiodystrophy","type":"exact"},{"name":"Pollitt syndrome","type":"exact"},{"name":"TTD4","type":"exact"},{"name":"hair-brain syndrome","type":"related"},{"name":"nonphotosensitive trichothiodystrophy","type":"related"},{"name":"nonphotosensitive trichothiodystrophy caused by mutation in MPLKIP","type":"exact"},{"name":"trichothiodystrophy 4, nonphotosensitive","type":"exact"},{"name":"trichothiodystrophy, nonphotosensitive 1","type":"related"},{"name":"trichothiodystrophy-neurocutaneous syndrome","type":"related"}],"termid":"MONDO:0021013","xrefs":{"Monarch":{"xref_id":"0021013"}}}


id: GO:0050189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + phosphoenolpyruvate = phosphate + pyruvate.","definition_xrefs":["EC:3.1.3.60","RHEA:19997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"phosphoenolpyruvate phosphatase activity","secondary_identifiers":["KEGG_REACTION:R00208","MetaCyc:PHOSPHOENOLPYRUVATE-PHOSPHATASE-RXN"],"synonyms":[{"name":"PEP phosphatase activity","type":"related"},{"name":"phosphoenolpyruvate phosphohydrolase activity","type":"related"}],"termid":"GO:0050189"}


id: GO:0002754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a ligand to an intracellular vesicle pattern recognition receptor (PRR). PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species.","definition_xrefs":["GOC:ar","GOC:add","PMID:15199967","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0002753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"endosomal pattern recognition receptor signaling pathway","synonyms":[{"name":"intracellular endosomal pattern recognition receptor signaling pathway","type":"exact"},{"name":"intracellular vesicle PAMP receptor signaling pathway","type":"related"},{"name":"intracellular vesicle PRR signaling pathway","type":"related"},{"name":"intracellular vesicle pathogen receptor signaling pathway","type":"related"},{"name":"intracellular vesicle pattern recognition receptor signaling pathway","type":"related"},{"name":"intracellular vesicle pattern recognition receptor signalling pathway","type":"related"}],"termid":"GO:0002754"}


id: GO:0048080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of establishment of a pattern of pigment in the cuticle of an organism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cuticle pigmentation","termid":"GO:0048079"},{"relation_name":"is_a","term_name":"negative regulation of developmental pigmentation","termid":"GO:0048086"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"cuticle pigmentation","termid":"GO:0048067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cuticle pigmentation","synonyms":[{"name":"down regulation of cuticle pigmentation","type":"exact"},{"name":"down-regulation of cuticle pigmentation","type":"exact"},{"name":"downregulation of cuticle pigmentation","type":"exact"},{"name":"inhibition of cuticle pigmentation","type":"narrow"}],"termid":"GO:0048080"}


id: MONDO:0009700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Carey-Fineman-Ziter syndrome (obsolete MONDO:0009700)","termid":"MONDO:0009700","xrefs":{"Monarch":{"xref_id":"0009700"}}}


id: PBO:0051823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 2","termid":"PBO:0051823"}


id: GO:0045763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving amino acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"negatively_regulates","term_name":"amino acid metabolic process","termid":"GO:0006520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520"],"is_obsolete":false,"name":"negative regulation of amino acid metabolic process","synonyms":[{"name":"down regulation of amino acid metabolic process","type":"exact"},{"name":"down-regulation of amino acid metabolic process","type":"exact"},{"name":"downregulation of amino acid metabolic process","type":"exact"},{"name":"inhibition of amino acid metabolic process","type":"narrow"},{"name":"negative regulation of amino acid metabolism","type":"exact"}],"termid":"GO:0045763"}


id: PBO:0073403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 6","termid":"PBO:0073403"}


id: GO:0046246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of terpenes, any of a large group of hydrocarbons made up of isoprene units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid biosynthetic process","termid":"GO:0008299"},{"relation_name":"is_a","term_name":"terpene metabolic process","termid":"GO:0042214"},{"relation_name":"is_a","term_name":"hydrocarbon biosynthetic process","termid":"GO:0120251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"terpene biosynthetic process","synonyms":[{"name":"terpene anabolism","type":"exact"},{"name":"terpene biosynthesis","type":"exact"},{"name":"terpene formation","type":"exact"},{"name":"terpene synthesis","type":"exact"}],"termid":"GO:0046246"}


id: PBO:0065333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 57","termid":"PBO:0065333"}


id: FYPO:0003154
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004105"}],"single_locus_phenotype":[{"annotations":[121528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004105"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell growth is abnormal in the vegetative growth phase of the life cycle. Cell growth is the irreversible increase in size over time by accretion and biosynthetic production of matter similar to that already present.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal cell growth","termid":"FYPO:0002862"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00514":null,"SJAG_04522":null},"genotype_count":2,"genotypes_by_uniquename":{"rga4delta__rga6delta":{"display_name":"rga4delta rga6delta","display_uniquename":"rga4delta__rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04522","SJAG_00028"],"name":"abnormal vegetative cell growth","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_00514"],"single_locus_genotype_uniquenames":["scd1delta"],"termid":"FYPO:0003154","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0004105":null,"FYPO_EXT:0000001":null}}


id: PBO:0049777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 9 pseudogene 5","termid":"PBO:0049777"}


id: GO:0051630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of acetylcholine into a cell, typically presynaptic neurons or glial cells. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylcholine transport","termid":"GO:0015870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"acetylcholine uptake","synonyms":[{"name":"acetylcholine import","type":"exact"}],"termid":"GO:0051630"}


id: GO:0032289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the wraps of cell membrane that constitute myelin are laid down around an axon by an oligodendrocyte in the central nervous system.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelin assembly","termid":"GO:0032288"},{"relation_name":"part_of","term_name":"central nervous system myelination","termid":"GO:0022010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"central nervous system myelin formation","synonyms":[{"name":"central nervous system myelin sheath formation","type":"exact"},{"name":"myelin formation in central nervous system","type":"exact"}],"termid":"GO:0032289"}


id: _global:hyperparasitized_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of hyperparasite of","direct_ancestors":[{"relation_name":"is_a","term_name":"host_of","termid":"_global:host_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperparasitized_by","secondary_identifiers":["RO:0002554"],"synonyms":[{"name":"has epiparasite","type":"related"},{"name":"has hyperparasite","type":"related"},{"name":"hyperparasitoidized by","type":"related"}],"termid":"_global:hyperparasitized_by"}


id: PBO:0059530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded termination associated sequence","termid":"PBO:0059530"}


id: PBO:0029123
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_elongated_cell_with_enlarged_nucleus_upon_entry_into_stationary_phase","termid":"PBO:0029123"}


id: GO:0090062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trehalose metabolism, the chemical reactions and pathways involving trehalose, a disaccharide that consists of two molecules of glucose and is isomeric with sucrose.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"regulates","term_name":"trehalose metabolic process","termid":"GO:0005991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of trehalose metabolic process","termid":"GO:0090062"}


id: PBO:0077771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of outer mitochondrial membrane 34","termid":"PBO:0077771"}


id: PBO:0065591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 7","termid":"PBO:0065591"}


id: GO:0097208
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized secretory organelle found in type II pneumocytes and involved in the synthesis, secretion, and reutilization of pulmonary surfactant.","definition_xrefs":["Wikipedia:Lamellar_granule","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellar body","termid":"GO:0042599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"alveolar lamellar body","termid":"GO:0097208"}


id: GO:0021669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to rhombomere 6. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GO_REF:0000021","GOC:curators","GOC:jid","GOC:cls","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere formation","termid":"GO:0021594"},{"relation_name":"part_of","term_name":"rhombomere 6 morphogenesis","termid":"GO:0021667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 6 formation","termid":"GO:0021669"}


id: PBO:0045428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatopontin","termid":"PBO:0045428"}


id: MONDO:1011275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any glaucoma that occurs in cats due to a mutation in the LTBP2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"glaucoma, domestic cat","termid":"MONDO:1011511"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glaucoma, LTBP2-related, domestic cat","secondary_identifiers":["OMIA:002017-9685"],"synonyms":[{"name":"glaucoma 3, primary congenital, domestic cat","type":"related"}],"termid":"MONDO:1011275","xrefs":{"Monarch":{"xref_id":"1011275"}}}


id: GO:0070231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a T cell, a type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex.","definition_xrefs":["GOC:mtg_apoptosis","CL:0000084","GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte apoptotic process","termid":"GO:0070227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell apoptotic process","synonyms":[{"name":"T cell apoptosis","type":"narrow"},{"name":"T lymphocyte apoptosis","type":"exact"},{"name":"T-cell apoptosis","type":"exact"},{"name":"T-lymphocyte apoptosis","type":"exact"},{"name":"programmed cell death of T cells by apoptosis","type":"exact"}],"termid":"GO:0070231"}


id: PBO:0084447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannitol dehydrogenase; MAN2 has a paralog, DSF1, that arose from a segmental duplication","termid":"PBO:0084447"}


id: PBO:0066274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 1 member H, pseudogene","termid":"PBO:0066274"}


id: MONDO:0000305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fusariosis (obsolete MONDO:0000305)","termid":"MONDO:0000305","xrefs":{"Monarch":{"xref_id":"0000305"}}}


id: MONDO:0019971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"soft tissue neoplasm","termid":"MONDO:0006424"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma of soft tissue","secondary_identifiers":["GARD:19367","Orphanet:97338"],"synonyms":[{"name":"clear cell sarcoma of the tendons and aponeuroses","type":"exact"}],"termid":"MONDO:0019971","xrefs":{"Monarch":{"xref_id":"0019971"}}}


id: FYPO:0008252
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any RNA transcribed from long terminal repeat elements (LTRs) measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:25356590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal LTR-derived RNA level","termid":"FYPO:0008252"}


id: PR:Q9UTB4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mss51 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTB4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mss51 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.04c","synonyms":[{"name":"Spom972h-mss51","type":"exact"}],"termid":"PR:Q9UTB4"}


id: PBO:0027329
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_translation_of_ribosomal_proteins","termid":"PBO:0027329"}


id: PBO:0074525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA C1","termid":"PBO:0074525"}


id: GO:0031663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a lipopolysaccharide (LPS) to a receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Lipopolysaccharides are major components of the outer membrane of Gram-negative bacteria, making them prime targets for recognition by the immune system.","definition_xrefs":["GOC:mah","GOC:signaling","PMID:15379975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"part_of","term_name":"cellular response to lipopolysaccharide","termid":"GO:0071222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"lipopolysaccharide-mediated signaling pathway","synonyms":[{"name":"LPS-mediated signaling pathway","type":"exact"},{"name":"lipopolysaccharide-mediated signalling pathway","type":"exact"}],"termid":"GO:0031663"}


id: PBO:0001599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Sqt1 (predicted)","termid":"PBO:0001599"}


id: MONDO:0006555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory reaction of the skin to various organic and inorganic antigens. It is characterized by tumor-like masses or nodules of granulomatous tissue comprised of activated histiocytes, epitheliod cells, and multinucleated giant cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"granulomatous dermatitis","secondary_identifiers":["NCIT:C3505","DOID:4397","UMLS:C0743086","EFO:1000705","MEDGEN:196647"],"termid":"MONDO:0006555","xrefs":{"Monarch":{"xref_id":"0006555"}}}


id: PBO:0001247
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progeroid disorders","termid":"PBO:0001247"}


id: MONDO:0044956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare carcinoma that arises from the paranasal sinus. It is characterized by the presence of epidermoid cells, mucus producing cells, and cells of intermediate type.","definition_xrefs":["NCIT:C6018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus carcinoma","termid":"MONDO:0000380"},{"relation_name":"is_a","term_name":"mucoepidermoid carcinoma","termid":"MONDO:0003036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"paranasal sinus mucoepidermoid carcinoma","secondary_identifiers":["UMLS:C1335340","MEDGEN:235461"],"synonyms":[{"name":"accessory sinus mucoepidermoid carcinoma","type":"exact"},{"name":"mucoepidermoid carcinoma of accessory sinus","type":"exact"},{"name":"mucoepidermoid carcinoma of paranasal sinus","type":"exact"},{"name":"mucoepidermoid carcinoma of the accessory sinus","type":"exact"},{"name":"mucoepidermoid carcinoma of the paranasal sinus","type":"exact"},{"name":"paranasal sinus mucoepidermoid carcinoma","type":"exact"}],"termid":"MONDO:0044956","xrefs":{"Monarch":{"xref_id":"0044956"}}}


id: PBO:0053569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 587","termid":"PBO:0053569"}


id: MONDO:0005754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A generalized tonic-clonic seizure.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"adolescence-adult electroclinical syndrome","termid":"MONDO:0000415"},{"relation_name":"excluded_subClassOf","term_name":"obsolete adolescent/adult-onset epilepsy syndrome (obsolete MONDO:0100030)","termid":"MONDO:0100030"},{"relation_name":"is_a","term_name":"variable-age onset idiopathic generalized epilepsy syndrome","termid":"MONDO:0800487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy with generalized tonic-clonic seizures","secondary_identifiers":["MESH:D004830","EFO:0007262","MEDGEN:4987","UMLS:C0014549","DOID:7725","NCIT:C3022","SCTID:352818000","ICD9:345.10"],"synonyms":[{"name":"EGTCA","type":"exact"},{"name":"epilepsy with generalized tonic-clonic seizures alone","type":"exact"},{"name":"epileptic seizures, tonic-clonic","type":"exact"},{"name":"grand Mal epilepsy","type":"exact"},{"name":"tonic-clonic epilepsy","type":"exact"}],"termid":"MONDO:0005754","xrefs":{"Monarch":{"xref_id":"0005754"}}}


id: PBO:0046538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group E member 1","termid":"PBO:0046538"}


id: MONDO:0010613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acquired metabolic disease that has its basis in the disruption of glycerol kinase activity.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn glycerol kinase deficiency","secondary_identifiers":["GARD:21311","UMLS:C0268418","OMIM:307030","DOID:0060363","MEDGEN:82803","Orphanet:308993","SCTID:124322002","NANDO:2200505"],"synonyms":[{"name":"GK deficiency","type":"related"},{"name":"GK1 deficiency","type":"related"},{"name":"GKD","type":"related"},{"name":"glycerol kinase deficiency","type":"exact"},{"name":"glycerol kinase deficiency, X-linked recessive","type":"exact"},{"name":"hyperglycerolemia","type":"related"},{"name":"inborn error of glycerol kinase activity","type":"exact"},{"name":"inborn glycerol kinase activity disorder","type":"exact"},{"name":"rare inborn error of glycerol kinase activity","type":"exact"}],"termid":"MONDO:0010613","xrefs":{"Monarch":{"xref_id":"0010613"}}}


id: GO:0052593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tryptamine + H2O + O2 = NH3 + indole acetaldehyde + hydrogen peroxide + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tryptamine:oxygen oxidoreductase (deaminating) activity (obsolete GO:0052593)","termid":"GO:0052593"}


id: GO:0070574
data:
  {"annotated_genes":["SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036249"}]},"cv_name":"biological_process","definition":"A process in which a cadmium ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cadmium ion transport","termid":"GO:0015691"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"cadmium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cadmium ion membrane transport","type":"exact"},{"name":"transmembrane cadmium transport","type":"exact"}],"termid":"GO:0070574","terms_by_termid":{"GO:0036249":null}}


id: PBO:0066007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ral GEF with PH domain and SH3 binding motif 2","termid":"PBO:0066007"}


id: GO:0018179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The desulfurization of peptidyl-L-cysteine to yield L-alanine and elemental sulfur; peptidyl-L-cysteine persulfide is an intermediate.","definition_xrefs":["RESID:AA0269"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-cysteine desulfurization (obsolete GO:0018179)","synonyms":[{"name":"peptidyl-cysteine desulfurization","type":"exact"},{"name":"peptidyl-cysteine desulphurization","type":"exact"}],"termid":"GO:0018179"}


id: PBO:0066253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX2 pseudogene 1","termid":"PBO:0066253"}


id: MONDO:1012067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital dyserythropoietic anemia with dyskeratosis and progressive alopecia, non-human animal","termid":"MONDO:1011688"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital dyserythropoietic anemia with dyskeratosis and progressive alopecia, cattle","secondary_identifiers":["OMIA:000313-9913"],"termid":"MONDO:1012067","xrefs":{"Monarch":{"xref_id":"1012067"}}}


id: PBO:0087740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Ssh1 translocon complex; Sec61p homolog involved in co-translational pathway of protein translocation; not essential","termid":"PBO:0087740"}


id: MONDO:0012023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant nonsyndromic deafness that is characterized by moderate loss for low and mid frequencies and mild loss for high frequencies and has material basis in variation in the chromosome region 1q21-q23.","definition_xrefs":["PMID:14627674","DOID:0110572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 49","secondary_identifiers":["MEDGEN:331222","GARD:18122","MESH:C564250","OMIM:608372","UMLS:C1842136"],"synonyms":[{"name":"DFNA49","type":"narrow"},{"name":"autosomal dominant deafness 49","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 49","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 49","type":"narrow"},{"name":"deafness, autosomal dominant 49","type":"narrow"}],"termid":"MONDO:0012023","xrefs":{"Monarch":{"xref_id":"0012023"}}}


id: PBO:0000861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate dehydrogenase (lipoamide) phosphatase (predicted)","termid":"PBO:0000861"}


id: PATO:0001075
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001075 absolute momentum (obsolete PATO:0001075)","termid":"PATO:0001075"}


id: PBO:0042038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC90B antisense RNA 1","termid":"PBO:0042038"}


id: MOD:01912
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one hydrogen atom of a residue with one bromine atom.","definition_xrefs":["Unimod:340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brominated residue","termid":"MOD:00754"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monobrominated residue","synonyms":[{"name":"Br1Res","type":"exact"}],"termid":"MOD:01912"}


id: PBO:0091527
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces MicroProtein","termid":"PBO:0091527"}


id: GO:1901583
data:
  {"annotated_genes":["SJAG_00922"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109949],"is_not":false,"summary":null,"term":"GO:1901583"}]},"cv_name":"biological_process","definition":"The directed movement of a tetrapeptide from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:TermGenie","PMID:22226946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide import across plasma membrane","termid":"GO:0140205"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00922":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"tetrapeptide import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tetrapeptide membrane transport","type":"exact"},{"name":"tetrapeptide transmembrane transport","type":"broad"}],"termid":"GO:1901583","terms_by_termid":{"GO:1901583":null}}


id: PBO:0079076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-4","termid":"PBO:0079076"}


id: PBO:0057320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 519a-1","termid":"PBO:0057320"}


id: MONDO:0015803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Botulism that is caused by toxin that is produced in a wound contaminated with Clostridium botulinum.","direct_ancestors":[{"relation_name":"is_a","term_name":"toxin-mediated infectious botulism","termid":"MONDO:0016468"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wound botulism","secondary_identifiers":["ICD10CM:A48.52","GARD:20149","SCTID:398530003","Orphanet:178475","ICD9:040.42","icd11.foundation:1674998448","NCIT:C128342","UMLS:C1306794","MEDGEN:224933","DOID:0050353"],"synonyms":[{"name":"cutaneous infectious botulism","type":"exact"},{"name":"cutaneous toxin-mediated botulism","type":"exact"},{"name":"inoculation botulism","type":"exact"},{"name":"skin infectious botulism","type":"exact"},{"name":"skin toxin-mediated botulism","type":"exact"}],"termid":"MONDO:0015803","xrefs":{"Monarch":{"xref_id":"0015803"}}}


id: PBO:0027897
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_snRNA_level","termid":"PBO:0027897"}


id: FYPO:0006122
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein methylation during vegetative growth","synonyms":[{"name":"abnormal protein methylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006122"}


id: PBO:0084475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mating pheromone a-factor; made by a cells; interacts with alpha cells to induce cell cycle arrest and other responses leading to mating; biogenesis involves C-terminal modification, N-terminal proteolysis, and export; also encoded by MFA2","termid":"PBO:0084475"}


id: PBO:0049032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 19","termid":"PBO:0049032"}


id: GO:0033476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an indole-3-acetic acid amide conjugate, a form of indoleacetic acid covalently bound to an a sugar or polyol through an ester bond.","definition_xrefs":["GOC:mah","MetaCyc:PWY-1741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indoleacetic acid conjugate biosynthetic process","termid":"GO:0033474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"indoleacetic acid ester conjugate biosynthetic process","synonyms":[{"name":"IAA ester conjugate biosynthetic process","type":"exact"},{"name":"indole acetic acid ester conjugate biosynthesis","type":"exact"},{"name":"indole acetic acid ester conjugate biosynthetic process","type":"exact"},{"name":"indoleacetic acid ester conjugate anabolism","type":"exact"},{"name":"indoleacetic acid ester conjugate biosynthesis","type":"exact"},{"name":"indoleacetic acid ester conjugate formation","type":"exact"},{"name":"indoleacetic acid ester conjugate synthesis","type":"exact"}],"termid":"GO:0033476"}


id: MONDO:0016538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypotonia-cystinuria syndrome type 1 (obsolete MONDO:0016538)","termid":"MONDO:0016538","xrefs":{"Monarch":{"xref_id":"0016538"}}}


id: GO:0030466
data:
  {"annotated_genes":["SJAG_02621","SJAG_00142","SJAG_03916","SJAG_02311","SJAG_02401","SJAG_01540","SJAG_03356","SJAG_02725","SJAG_04186","SJAG_03193","SJAG_03680","SJAG_00160","SJAG_03128","SJAG_03689","SJAG_00756","SJAG_01579","SJAG_00934","SJAG_04574","SJAG_00341","SJAG_03844","SJAG_02592","SJAG_01601","SJAG_03042","SJAG_03982","SJAG_02409","SJAG_00266","SJAG_02778","SJAG_02342","SJAG_02119","SJAG_04141","SJAG_03997"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61246,73419,93152,94636,95967,96236,97423,98643,101043,101482,106027,106126,109938,110125,112464,113194,113258,114096,114198,115288,115665,115987,117426,117987,119709,119998,120115,120848],"is_not":false,"summary":null,"term":"GO:0030466"},{"annotations":[93063,112321,96260],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090055"}]},"cv_name":"biological_process","definition":"Repression of transcription at silent mating-type loci by alteration of the structure of chromatin.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constitutive heterochromatin formation","termid":"GO:0140719"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_00160":null,"SJAG_00266":null,"SJAG_00341":null,"SJAG_00756":null,"SJAG_00934":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01601":null,"SJAG_02119":null,"SJAG_02311":null,"SJAG_02342":null,"SJAG_02401":null,"SJAG_02409":null,"SJAG_02592":null,"SJAG_02621":null,"SJAG_02725":null,"SJAG_02778":null,"SJAG_03042":null,"SJAG_03128":null,"SJAG_03193":null,"SJAG_03356":null,"SJAG_03680":null,"SJAG_03689":null,"SJAG_03844":null,"SJAG_03916":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04141":null,"SJAG_04186":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006325","GO:0008150"],"is_obsolete":false,"name":"silent mating-type cassette heterochromatin formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0035389","GO:0006347"],"synonyms":[{"name":"aging-dependent sterility","type":"narrow"},{"name":"chromatin silencing at HML and HMR","type":"narrow"},{"name":"chromatin silencing at silent mating-type cassette","type":"exact"},{"name":"establishment of chromatin silencing at silent mating-type cassette","type":"related"},{"name":"heterochromatic silencing at silent mating-type cassette","type":"exact"},{"name":"silent mating-type cassette chromatin silencing","type":"exact"},{"name":"silent mating-type cassette heterochromatin assembly","type":"exact"}],"termid":"GO:0030466","terms_by_termid":{"GO:0030466":null,"GO:0090055":null}}


id: GO:0002820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an adaptive immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adaptive immune response","termid":"GO:0002819"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"adaptive immune response","termid":"GO:0002250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of adaptive immune response","synonyms":[{"name":"down regulation of adaptive immune response","type":"exact"},{"name":"down-regulation of adaptive immune response","type":"exact"},{"name":"downregulation of adaptive immune response","type":"exact"},{"name":"inhibition of adaptive immune response","type":"narrow"}],"termid":"GO:0002820"}


id: PBO:0028281
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_mating-type_region_heterochromatin","termid":"PBO:0028281"}


id: PBO:0063424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 4C","termid":"PBO:0063424"}


id: PBO:0081482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 362","termid":"PBO:0081482"}


id: GO:0030180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Exchange diffusion of two solutes between the inside and outside of a cell or subcellular compartment, in which movement of one solute down a concentration gradient drives movement of the other solute in the opposite direction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete solute:solute exchange (obsolete GO:0030180)","synonyms":[{"name":"solute:solute exchange","type":"exact"}],"termid":"GO:0030180"}


id: PBO:0031800
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_cycle_arrest_at_mitotic_G2/M_phase_transition","termid":"PBO:0031800"}


id: RO:0003305
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the entity influences the severity with which a condition manifests in an individual.","direct_ancestors":[{"relation_name":"is_a","term_name":"contributes_to_condition","termid":"RO:0003304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contributes_to_severity_of_condition","termid":"RO:0003305"}


id: MONDO:0008176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bone Paget disease","termid":"MONDO:0005382"},{"relation_name":"is_a","term_name":"SQSTM1-related multisystem proteinopathy","termid":"MONDO:0800464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"Paget disease of bone 3","secondary_identifiers":["DOID:0081366","MEDGEN:895927","OMIM:167250","UMLS:C4085252"],"synonyms":[{"name":"PDB3","type":"related"},{"name":"Paget disease of bone 3","type":"exact"},{"name":"Paget disease of bone type 3","type":"exact"},{"name":"Paget disease of bone, familial","type":"related"},{"name":"familial Paget disease of bone","type":"related"}],"termid":"MONDO:0008176","xrefs":{"Monarch":{"xref_id":"0008176"}}}


id: PBO:0070858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 11","termid":"PBO:0070858"}


id: PBO:0085290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pex3p interacting protein, required for pexophagy; interacts with Atg8p and Atg11p; mRNA is weakly cell cycle regulated, peaking in G2 phase; YJL185C is a non-essential gene","termid":"PBO:0085290"}


id: PBO:0059466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutS homolog 5","termid":"PBO:0059466"}


id: GO:0060046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the acrosome reaction.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"acrosome reaction","termid":"GO:0007340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of acrosome reaction","termid":"GO:0060046"}


id: PBO:0086325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to mammalian monocarboxylate permeases; monocarboxylate permeases are involved in transport of monocarboxylic acids across the plasma membrane but mutant is not deficient in monocarboxylate transport","termid":"PBO:0086325"}


id: PBO:0088506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger, RING-type, Rad16-like","termid":"PBO:0088506"}


id: GO:0032831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of differentiation of CD4-positive, CD25-positive, alpha-beta regulatory T cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","termid":"GO:0032829"},{"relation_name":"is_a","term_name":"positive regulation of CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043372"},{"relation_name":"is_a","term_name":"positive regulation of regulatory T cell differentiation","termid":"GO:0045591"},{"relation_name":"positively_regulates","term_name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","termid":"GO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","synonyms":[{"name":"activation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","type":"narrow"},{"name":"positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell development","type":"related"},{"name":"positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T-cell differentiation","type":"exact"},{"name":"positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T-lymphocyte differentiation","type":"exact"},{"name":"stimulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","type":"narrow"},{"name":"up regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","type":"exact"},{"name":"up-regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","type":"exact"},{"name":"upregulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","type":"exact"}],"termid":"GO:0032831"}


id: PATO:0002176
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A deviation quality inhering in a bearer by virtue of the bearer's changed direction of position towards the side.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deviation","termid":"PATO:0002175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deviation towards the lateral side","termid":"PATO:0002176"}


id: SO:0000377
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An enterobacterial RNA that binds the CsrA protein. The CsrB RNAs contain a conserved motif CAGGXXG that is found in up to 18 copies and has been suggested to bind CsrA. The Csr regulatory system has a strong negative regulatory effect on glycogen biosynthesis, glyconeogenesis and glycogen catabolism and a positive regulatory effect on glycolysis. In other bacteria such as Erwinia caratovara the RsmA protein has been shown to regulate the production of virulence determinants, such extracellular enzymes. RsmA binds to RsmB regulatory RNA which is also a member of this family.","direct_ancestors":[{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CsrB_RsmB_RNA","synonyms":[{"name":"CsrB RsmB RNA","type":"exact"},{"name":"CsrB-RsmB RNA","type":"exact"}],"termid":"SO:0000377"}


id: PBO:0072265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S21 pseudogene 3","termid":"PBO:0072265"}


id: GO:0023020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of gene expression as a consequence of a process in which a T cell signal is released and/or conveyed from one location to another.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of gene expression as a consequence of T cell signal transmission (obsolete GO:0023020)","synonyms":[{"name":"regulation of gene expression as a consequence of T cell signal transmission","type":"exact"}],"termid":"GO:0023020"}


id: MONDO:0021378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the endocardium.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardium disorder","termid":"MONDO:0000470"},{"relation_name":"is_a","term_name":"heart neoplasm","termid":"MONDO:0021209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"neoplasm of endocardium","secondary_identifiers":["UMLS:C1290401","SCTID:126731002","ICD9:239.89","NCIT:C5346","MEDGEN:220938"],"synonyms":[{"name":"endocardial neoplasm","type":"exact"},{"name":"endocardial tumor","type":"exact"},{"name":"endocardial tumour","type":"exact"},{"name":"endocardium neoplasm","type":"exact"},{"name":"endocardium neoplasm (disease)","type":"exact"},{"name":"endocardium tumor","type":"exact"},{"name":"endocardium tumour","type":"exact"},{"name":"neoplasm of endocardium","type":"exact"},{"name":"neoplasm of the endocardium","type":"exact"},{"name":"tumor of endocardium","type":"exact"},{"name":"tumor of the endocardium","type":"exact"},{"name":"tumour of endocardium","type":"exact"},{"name":"tumour of the endocardium","type":"exact"}],"termid":"MONDO:0021378","xrefs":{"Monarch":{"xref_id":"0021378"}}}


id: PBO:0043263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 22","termid":"PBO:0043263"}


id: PR:Q50HP3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spc19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q50HP3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit spc19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.15c","synonyms":[{"name":"Spom972h-spc19","type":"exact"},{"name":"outer kinetochore protein spc19 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q50HP3"}


id: PBO:0079448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCL1 upstream neural differentiation-associated RNA","termid":"PBO:0079448"}


id: GO:0070881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of proline transport.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"regulates","term_name":"proline transport","termid":"GO:0015824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of proline transport","termid":"GO:0070881"}


id: MONDO:1011670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spina bifida with raduschisis, non-human animal","secondary_identifiers":["OMIA:000936"],"termid":"MONDO:1011670","xrefs":{"Monarch":{"xref_id":"1011670"}}}


id: GO:0031177
data:
  {"annotated_genes":["SJAG_04031","SJAG_00869"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59553,65966],"is_not":false,"summary":null,"term":"GO:0031177"}]},"cv_name":"molecular_function","definition":"Binding to phosphopantetheine, the vitamin pantetheine 4'-(dihydrogen phosphate).","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"modified amino acid binding","termid":"GO:0072341"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00869":null,"SJAG_04031":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"phosphopantetheine binding","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0031177","terms_by_termid":{"GO:0031177":null}}


id: MONDO:1012783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any spinocerebellar ataxia that occurs in dogs due to a mutation in the KCNJ10 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, dog","termid":"MONDO:1012957"},{"relation_name":"is_a","term_name":"hereditary cerebellar ataxia, non-human animal","termid":"MONDO:1012960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinocerebellar ataxia, KCNJ10-related, dog","secondary_identifiers":["OMIA:002089-9615"],"synonyms":[{"name":"SAMS","type":"exact"},{"name":"SDCA1","type":"exact"},{"name":"ataxia, cerebellar, KCNJ10-related, dog","type":"exact"},{"name":"spinocerebellar ataxia with myokymia, seizures or both","type":"related"},{"name":"spongy degeneration with cerebellar ataxia 1","type":"related"}],"termid":"MONDO:1012783","xrefs":{"Monarch":{"xref_id":"1012783"}}}


id: GO:0050374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + UDP-alpha-D-galacturonate = CO2 + UDP-L-arabinose.","definition_xrefs":["RHEA:19725","EC:4.1.1.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"UDP-galacturonate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R02636","MetaCyc:UDP-GALACTURONATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"UDP-D-galacturonate carboxy-lyase (UDP-L-arabinose-forming)","type":"related"},{"name":"UDP-D-galacturonate carboxy-lyase activity","type":"related"},{"name":"UDP-galacturonic acid decarboxylase activity","type":"related"},{"name":"UDPGalUA carboxy lyase activity","type":"related"},{"name":"UDPgalacturonate decarboxylase activity","type":"related"}],"termid":"GO:0050374"}


id: PBO:0111057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase superfamily, implicated in transcription , RNA processing, or RNA export","termid":"PBO:0111057"}


id: PBO:0066353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulocalbin 1 pseudogene 1","termid":"PBO:0066353"}


id: MONDO:0009831
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015278"}]},"cv_name":"mondo","definition":"A malignant neoplasm involving the pancreas.","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system cancer","termid":"MONDO:0002516"},{"relation_name":"is_a","term_name":"pancreatic neoplasm","termid":"MONDO:0021040"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"malignant pancreatic neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:1793","NCIT:C9005","ICD9:157.8","EFO:1000359","ICD9:157.0","ICD9:157.1","ICD9:157.2"],"synonyms":[{"name":"Ca body of pancreas","type":"exact"},{"name":"Ca head of pancreas","type":"exact"},{"name":"Ca tail of pancreas","type":"exact"},{"name":"cancer of pancreas","type":"exact"},{"name":"malignant neoplasm of body of pancreas","type":"exact"},{"name":"malignant neoplasm of head of pancreas","type":"exact"},{"name":"malignant neoplasm of pancreas","type":"exact"},{"name":"malignant neoplasm of tail of pancreas","type":"exact"},{"name":"malignant neoplasm of the pancreas","type":"exact"},{"name":"malignant pancreas neoplasm","type":"exact"},{"name":"malignant pancreatic neoplasm","type":"exact"},{"name":"pancreas cancer","type":"exact"},{"name":"pancreas neoplasm","type":"broad"},{"name":"pancreatic cancer","type":"exact"},{"name":"pancreatic tumour","type":"related"}],"termid":"MONDO:0009831","terms_by_termid":{"MONDO:0015278":null},"xrefs":{"Monarch":{"xref_id":"0009831"}}}


id: PBO:0047926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(11)(p14.2)","termid":"PBO:0047926"}


id: FYPO:0002450
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is septated and has abnormal morphology (i.e. size, shape, or structure), and that undergoes two or more rounds of cell division and then dies.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, abnormal morphology","termid":"FYPO:0002148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000005","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, septated cell with abnormal morphology","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, septated cell with abnormal morphology","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, septated cell with abnormal morphology","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, septated cell with abnormal morphology","type":"exact"}],"termid":"FYPO:0002450"}


id: PBO:0065498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone 4","termid":"PBO:0065498"}


id: GO:1905164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phagosome maturation.","definition_xrefs":["GOC:PARL","GOC:bf","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of phagosome maturation","termid":"GO:1905162"},{"relation_name":"positively_regulates","term_name":"phagosome maturation","termid":"GO:0090382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phagosome maturation","synonyms":[{"name":"activation of phagosome maturation","type":"narrow"},{"name":"up regulation of phagosome maturation","type":"exact"},{"name":"up-regulation of phagosome maturation","type":"exact"},{"name":"upregulation of phagosome maturation","type":"exact"}],"termid":"GO:1905164"}


id: PBO:0046932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM47E-STBD1 readthrough","termid":"PBO:0046932"}


id: GO:1905192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chloroplast fission.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26862170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"chloroplast fission","termid":"GO:0010020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chloroplast fission","synonyms":[{"name":"regulation of chloroplast division","type":"exact"}],"termid":"GO:1905192"}


id: PBO:0057327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 520b","termid":"PBO:0057327"}


id: PBO:0068854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 92, pseudogene","termid":"PBO:0068854"}


id: MONDO:0006640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Excess production of adrenal cortex hormones.","definition_xrefs":["MESH:D000308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal cortex disorder","termid":"MONDO:0002816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenal gland hyperfunction","secondary_identifiers":["ICD9:255.3","MEDGEN:7899","SCTID:275437005","UMLS:C0001622","DOID:3947","HP:0003118","EFO:1000797"],"synonyms":[{"name":"adrenal gland hyperfunction","type":"exact"},{"name":"adrenocortical hyperfunction","type":"exact"},{"name":"disorder of corticoadrenal overactivity","type":"related"},{"name":"hyperadrenalism","type":"exact"},{"name":"hyperadrenocorticism","type":"related"},{"name":"hypercorticism","type":"related"},{"name":"hypercortisolemia","type":"exact"},{"name":"hypercortisolism","type":"exact"},{"name":"hyperfunction, adrenal gland","type":"related"},{"name":"hyperfunction, adrenocortical","type":"related"}],"termid":"MONDO:0006640","xrefs":{"Monarch":{"xref_id":"0006640"}}}


id: MONDO:0013779
data:
  {"annotated_genes":["SJAG_03119"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88513],"is_not":false,"summary":null,"term":"MONDO:0013779"}]},"cv_name":"mondo","definition":"Any Wiskott-Aldrich syndrome in which the cause of the disease is a mutation in the WIPF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03119":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Wiskott-Aldrich syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3281001","OMIM:277970","MEDGEN:482631","NCIT:C176820","OMIM:614493","GARD:15809"],"synonyms":[{"name":"WAS2","type":"related"},{"name":"WIPF1 Wiskott-Aldrich syndrome","type":"exact"},{"name":"Wipf1 deficiency","type":"related"},{"name":"Wiskott-Aldrich syndrome 2","type":"exact"},{"name":"Wiskott-Aldrich syndrome caused by mutation in WIPF1","type":"exact"},{"name":"Wiskott-Aldrich syndrome type 2","type":"exact"}],"termid":"MONDO:0013779","terms_by_termid":{"MONDO:0013779":null},"xrefs":{"Monarch":{"xref_id":"0013779"}}}


id: PR:O74383
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3H7.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3H7.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.08c","synonyms":[{"name":"Spom972h-SPBC3H7.08c","type":"exact"}],"termid":"PR:O74383"}


id: GO:0099093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a calcium ion (Ca2+) is transported out of the mitochondrial matrix, and into the cytosol.","definition_xrefs":["GOC:dos","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial calcium ion transmembrane transport","termid":"GO:0006851"},{"relation_name":"is_a","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"calcium export from the mitochondrion","synonyms":[{"name":"calcium ion transmembrane export from mitochondrion","type":"exact"},{"name":"mitochondrial calcium ion export","type":"broad"},{"name":"mitochondrial calcium release","type":"exact"}],"termid":"GO:0099093"}


id: GO:0051987
data:
  {"annotated_genes":["SJAG_01837","SJAG_01805","SJAG_03048","SJAG_03126","SJAG_04140","SJAG_00082","SJAG_05290","SJAG_04280"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118011,113947,107129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[91871,95690,104315,113187,118685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the attachment of spindle microtubules to the kinetochore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chromosome segregation","termid":"GO:0051984"},{"relation_name":"is_a","term_name":"regulation of attachment of spindle microtubules to kinetochore","termid":"GO:0051988"},{"relation_name":"positively_regulates","term_name":"attachment of spindle microtubules to kinetochore","termid":"GO:0008608"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of attachment of spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of attachment of spindle microtubules to kinetochore","type":"narrow"},{"name":"stimulation of attachment of spindle microtubules to kinetochore","type":"narrow"},{"name":"up regulation of attachment of spindle microtubules to kinetochore","type":"exact"},{"name":"up-regulation of attachment of spindle microtubules to kinetochore","type":"exact"},{"name":"upregulation of attachment of spindle microtubules to kinetochore","type":"exact"}],"termid":"GO:0051987","terms_by_termid":{"GO:0140429":null,"GO:1902425":null}}


id: MONDO:0006779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A localized bulging or dilatation in the muscle wall of a heart (myocardium), usually in the left ventricle. Blood-filled aneurysms are dangerous because they may burst. Fibrous aneurysms interfere with the heart function through the loss of contractility. True aneurysm is bound by the vessel wall or cardiac wall. False aneurysms are hematoma caused by myocardial rupture.","definition_xrefs":["MESH:D006322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"heart aneurysm","secondary_identifiers":["EFO:1000959","NANDO:2200234","ICD10CM:I25.3","ICD9:414.19","MEDGEN:42360","MedDRA:10002350","DOID:9768","ICD9:414.10","SCTID:65340007","UMLS:C0018789"],"synonyms":[{"name":"cardiac aneurysm","type":"exact"}],"termid":"MONDO:0006779","xrefs":{"Monarch":{"xref_id":"0006779"}}}


id: MONDO:0015491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immune complex mediated vasculitis","secondary_identifiers":["GARD:19984","Orphanet:156149","MEDGEN:1842565","UMLS:C5680655"],"termid":"MONDO:0015491","xrefs":{"Monarch":{"xref_id":"0015491"}}}


id: FYPO:0002625
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to parts of the chromosome containing ribosomal DNA is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000138","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to rDNA","synonyms":[{"name":"normal protein localisation to rDNA","type":"exact"},{"name":"normal protein localization to rDNA during mitotic cell cycle","type":"related"},{"name":"normal protein localization to rDNA during vegetative growth","type":"exact"},{"name":"normal protein localization to ribosomal DNA","type":"exact"}],"termid":"FYPO:0002625"}


id: GO:0003711
data:
  {"annotated_genes":["SJAG_02238","SJAG_00483","SJAG_02691","SJAG_04353","SJAG_02097","SJAG_01707","SJAG_03481","SJAG_00540","SJAG_03211","SJAG_02393"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74095,93861,94529,95834,101857,107457,108782,109852,115178,119950],"is_not":false,"summary":null,"term":"GO:0003711"}]},"cv_name":"molecular_function","definition":"A molecular function that stimulates the elongation properties of the RNA polymerase during the elongation phase of transcription. A subclass of transcription elongation factors enable the transition from transcription initiation to elongation, while another class rescue stalled RNA polymerases.","definition_xrefs":["PMID:23878398","GOC:txnOH-2018","PMID:28892040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator activity","termid":"GO:0140110"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00483":null,"SJAG_00540":null,"SJAG_01707":null,"SJAG_02097":null,"SJAG_02238":null,"SJAG_02393":null,"SJAG_02691":null,"SJAG_03211":null,"SJAG_03481":null,"SJAG_04353":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140110"],"is_obsolete":false,"name":"transcription elongation factor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"transcription elongation regulator activity","type":"related"},{"name":"transcriptional elongation regulator activity","type":"related"}],"termid":"GO:0003711","terms_by_termid":{"GO:0003711":null}}


id: PBO:0062988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PACRG antisense RNA 3","termid":"PBO:0062988"}


id: GO:1903256
data:
  {"annotated_genes":["SJAG_03856","SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105559,72688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving selenoneine.","definition_xrefs":["PMID:24828577","GOC:TermGenie","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine metabolic process","termid":"GO:0006577"},{"relation_name":"is_a","term_name":"modified histidine metabolic process","termid":"GO:0052701"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00832":null,"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"selenoneine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"L-selenoneine metabolic process","type":"narrow"},{"name":"selenoneine metabolism","type":"exact"}],"termid":"GO:1903256","terms_by_termid":{"GO:1903257":null}}


id: GO:0001108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a component of the basal transcription machinery which is composed of a bacterial-type RNA polymerase core enzyme and a sigma factor, the minimal set of factors required for formation of the preinitiation complex (PIC) by a bacterial-type RNA polymerase.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basal transcription machinery binding","termid":"GO:0001098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"bacterial-type RNA polymerase holo enzyme binding","synonyms":[{"name":"basal bacterial-type RNA polymerase transcription machinery binding","type":"exact"}],"termid":"GO:0001108"}


id: PATO:0000207
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000207 circulatory function (obsolete PATO:0000207)","termid":"PATO:0000207"}


id: PR:O59734
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A small nuclear ribonucleoprotein F that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11021:SF0","OMA:SCHPO03376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein F (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.14","secondary_identifiers":["UniProtKB:O59734"],"synonyms":[{"name":"Sm protein F (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Sm-F (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SmF (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SNRPF","type":"exact"},{"name":"snRNP-F (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59734"}


id: PBO:0075835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatostatin receptor 3","termid":"PBO:0075835"}


id: PBO:0053051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP7 pseudogene 2","termid":"PBO:0053051"}


id: MONDO:0007774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abnormal response to a stimulus applied to the sensory components of the nervous system. This may take the form of increased, decreased, or absent reflexes.","definition_xrefs":["MESH:D012021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperreflexia","secondary_identifiers":["OMIM:145290","UMLS:C0151889","icd11.foundation:514864448","HP:0001347","MEDGEN:57738"],"synonyms":[{"name":"HRX","type":"related"},{"name":"hyperreflexia","type":"exact"},{"name":"hyperreflexia (disease)","type":"exact"}],"termid":"MONDO:0007774","xrefs":{"Monarch":{"xref_id":"0007774"}}}


id: GO:0097109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the neuroligin protein family, neuronal cell surface proteins that mediate synapse formation.","definition_xrefs":["GOC:pr","PMID:21424692","GOC:BHF","GOC:sjp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"neuroligin family protein binding","termid":"GO:0097109"}


id: PBO:0053998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1322","termid":"PBO:0053998"}


id: PBO:0047944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(16)(p13.11)","termid":"PBO:0047944"}


id: FYPO:0002385
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to heterochromatin during vegetative growth","termid":"FYPO:0001131"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to heterochromatin during vegetative growth","synonyms":[{"name":"decreased protein localisation to heterochromatin during vegetative growth","type":"exact"},{"name":"decreased protein localization to heterochromatin during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0002385"}


id: PBO:0017978
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PhosphoFructoKinase","termid":"PBO:0017978"}


id: PBO:0043146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 14","termid":"PBO:0043146"}


id: SO:0001237
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence feature that corresponds to a single amino acid residue in a polypeptide.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"part_of","term_name":"polypeptide","termid":"SO:0000104"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino_acid","secondary_identifiers":["http://en.wikipedia.org/wiki/Amino_acid"],"synonyms":[{"name":"amino acid","type":"exact"}],"termid":"SO:0001237"}


id: GO:0004496
data:
  {"annotated_genes":["SJAG_04865"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81954],"is_not":false,"summary":null,"term":"GO:0004496"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-mevalonate + ATP = (R)-5-phosphomevalonate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.36","RHEA:17065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"mevalonate kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R02245","Reactome:R-HSA-191380","MetaCyc:MEVALONATE-KINASE-RXN"],"synonyms":[{"name":"ATP:(R)-mevalonate 5-phosphotransferase activity","type":"related"},{"name":"ATP:mevalonate 5-phosphotransferase activity","type":"related"},{"name":"MVA kinase activity","type":"related"},{"name":"mevalonate 5-phosphotransferase activity","type":"related"},{"name":"mevalonate kinase (phosphorylating)","type":"related"},{"name":"mevalonate phosphokinase activity","type":"related"},{"name":"mevalonic acid kinase activity","type":"related"},{"name":"mevalonic kinase activity","type":"related"}],"termid":"GO:0004496","terms_by_termid":{"GO:0004496":null}}


id: PBO:0087537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of protein N-terminal acetyltransferase NatA; NatA comprises Nat1p, Ard1p, Nat5p; acetylates many proteins to influence telomeric silencing, cell cycle, heat-shock resistance, mating, sporulation, early stages of mitophagy; protein abundance increases under DNA replication stress; mutations in human homolog X-linked NAA10 lead to Ogden syndrome (S37P) and intellectual disability (R116W); expression of human NAA10 and NAA15 can complement ard1 nat1 double mutant","termid":"PBO:0087537"}


id: GO:0120180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a cell-substrate junction into its constituent components.","definition_xrefs":["GOC:bc","PMID:25490267","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate junction organization","termid":"GO:0150115"},{"relation_name":"is_a","term_name":"cell junction disassembly","termid":"GO:0150146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-substrate junction disassembly","termid":"GO:0120180"}


id: GO:0002949
data:
  {"annotated_genes":["SJAG_04182","SJAG_02863","SJAG_00378","SJAG_06560","SJAG_04201","SJAG_00865","SJAG_04700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59076,80521,100194,101374,103064],"is_not":false,"summary":null,"term":"GO:0002949"},{"annotations":[77245,120649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072670"}]},"cv_name":"biological_process","definition":"The attachment of a carbonyl group and a threonine to the amino group of the adenine residue immediately 3' of the anticodon, in tRNAs that decode ANN codons (where N is any base).","definition_xrefs":["GOC:mah","PMID:23258706","PMID:21183954","PMID:19287007","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"},{"relation_name":"is_a","term_name":"tRNA threonylcarbamoyladenosine metabolic process","termid":"GO:0070525"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00378":null,"SJAG_00865":null,"SJAG_02863":null,"SJAG_04182":null,"SJAG_04201":null,"SJAG_04700":null,"SJAG_06560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine modification","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0070526"],"synonyms":[{"name":"t6A biosynthesis","type":"exact"},{"name":"t6A biosynthetic process","type":"exact"},{"name":"t6A tRNA modification","type":"exact"},{"name":"threonylcarbamoyladenosine anabolism","type":"exact"},{"name":"threonylcarbamoyladenosine biosynthesis","type":"exact"},{"name":"threonylcarbamoyladenosine biosynthetic process","type":"exact"},{"name":"threonylcarbamoyladenosine formation","type":"exact"},{"name":"threonylcarbamoyladenosine synthesis","type":"exact"}],"termid":"GO:0002949","terms_by_termid":{"GO:0002949":null,"GO:0072670":null}}


id: PR:Q09933
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dis1 gene.","definition_xrefs":["UniProtKB:Q09933","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoprotein p93 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.14","synonyms":[{"name":"Spom972h-dis1","type":"exact"}],"termid":"PR:Q09933"}


id: PBO:0011510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon Dpb3 (predicted)","termid":"PBO:0011510"}


id: MONDO:0019011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Charcot-Marie-Tooth disease type 1 (CMT1) is a group of autosomal dominant demyelinating peripheral neuropathies characterized by distal weakness and atrophy, sensory loss, foot deformities, and slow nerve conduction velocity.","definition_xrefs":["Orphanet:65753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 1","secondary_identifiers":["GARD:12433","MEDGEN:155486","DOID:0050538","NANDO:1200017","UMLS:C0751036","SCTID:398040009"],"synonyms":[{"name":"CMT1","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 1","type":"exact"},{"name":"Charcot-Marie-Tooth type 1","type":"related"},{"name":"autosomal dominant demyelinating Charcot-Marie-Tooth disease","type":"exact"},{"name":"hereditary motor and sensory neuropathy type 1","type":"exact"}],"termid":"MONDO:0019011","xrefs":{"Monarch":{"xref_id":"0019011"}}}


id: GO:0009990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell recognition involving the deposition of specific pathways in the extracellular matrix that guide migrating cells.","definition_xrefs":["ISBN:0824072820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-matrix recognition","termid":"GO:0009989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"contact guidance","termid":"GO:0009990"}


id: PBO:0028023
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_14-3-3_protein_binding","termid":"PBO:0028023"}


id: MONDO:0019751
data:
  {"annotated_genes":["SJAG_04118","SJAG_04969","SJAG_04290","SJAG_04380","SJAG_01474","SJAG_01884","SJAG_02763","SJAG_04865","SJAG_03151","SJAG_03596","SJAG_00400","SJAG_04569","SJAG_05239","SJAG_04077","SJAG_03805","SJAG_00853","SJAG_04541","SJAG_02039","SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012429"},{"annotations":[86998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012471"},{"annotations":[87001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012472"},{"annotations":[87089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014007"},{"annotations":[89133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014629"},{"annotations":[89088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013944"},{"annotations":[87856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007483"},{"annotations":[88483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013766"},{"annotations":[88586,88587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009849"},{"annotations":[87716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012316"},{"annotations":[86884,86883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012481"},{"annotations":[88582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054698"},{"annotations":[88389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054700"},{"annotations":[87252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054699"},{"annotations":[89028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0968983"},{"annotations":[86951,86950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011462"},{"annotations":[88260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024541"},{"annotations":[88111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013818"},{"annotations":[87722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026777"},{"annotations":[87470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010523"}]},"cv_name":"mondo","definition":"A group of disorders of the innate immune system characterized by attacks of seemingly unprovoked inflammation without significant levels of either autoantibodies or autoreactive T cells more characteristic of autoimmune disease.","definition_xrefs":["PMID:23827249","NCIT:C119050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00321":null,"SJAG_00400":null,"SJAG_00853":null,"SJAG_01474":null,"SJAG_01884":null,"SJAG_02039":null,"SJAG_02763":null,"SJAG_03151":null,"SJAG_03596":null,"SJAG_03805":null,"SJAG_04077":null,"SJAG_04118":null,"SJAG_04290":null,"SJAG_04380":null,"SJAG_04541":null,"SJAG_04569":null,"SJAG_04865":null,"SJAG_04969":null,"SJAG_05239":null},"genotype_count":0,"is_obsolete":false,"name":"autoinflammatory syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2100156","MEDGEN:855741","Orphanet:93665","MedDRA:10072220","GARD:19234","ICD10CM:M04-M04","UMLS:C3890737"],"termid":"MONDO:0019751","terms_by_termid":{"MONDO:0007483":null,"MONDO:0009849":null,"MONDO:0010523":null,"MONDO:0011462":null,"MONDO:0012316":null,"MONDO:0012429":null,"MONDO:0012471":null,"MONDO:0012472":null,"MONDO:0012481":null,"MONDO:0013766":null,"MONDO:0013818":null,"MONDO:0013944":null,"MONDO:0014007":null,"MONDO:0014629":null,"MONDO:0024541":null,"MONDO:0026777":null,"MONDO:0054698":null,"MONDO:0054699":null,"MONDO:0054700":null,"MONDO:0968983":null},"xrefs":{"Monarch":{"xref_id":"0019751"}}}


id: PBO:0088465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage and polyadenylation HECT-type ubiquitin-protein ligase E3 Ipa1","termid":"PBO:0088465"}


id: MONDO:0011384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"essential hypertension","termid":"MONDO:0001134"},{"relation_name":"excluded_subClassOf","term_name":"essential hypertension, genetic","termid":"MONDO:0007781"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertension, essential, susceptibility to, 1","secondary_identifiers":["OMIM:603918","MEDGEN:395143","UMLS:C1858967"],"synonyms":[{"name":"Hyt1","type":"related"},{"name":"hypertension, essential, susceptibility to, 1","type":"exact"},{"name":"hypertension, essential, susceptibility to, type 1","type":"exact"}],"termid":"MONDO:0011384","xrefs":{"Monarch":{"xref_id":"0011384"}}}


id: PBO:0043224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride channel accessory 3, pseudogene","termid":"PBO:0043224"}


id: PBO:0085813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; exhibits genetic interaction with ERG11 and protein-protein interaction with Hsp82p","termid":"PBO:0085813"}


id: GO:0004206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-10 activity (obsolete GO:0004206)","synonyms":[{"name":"caspase-10 activity","type":"exact"}],"termid":"GO:0004206"}


id: PBO:0059352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S16","termid":"PBO:0059352"}


id: PBO:0083596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; deletion adversely affects sporulation; deletion mutant exhibits synthetic phenotype under expression of mutant huntingtin fragment, but gene does not have human ortholog","termid":"PBO:0083596"}


id: PBO:0062184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily N member 4","termid":"PBO:0062184"}


id: GO:0032548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a pyrimidine deoxyribonucleoside, a compound consisting of a pyrimidine base linked to deoxyribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside binding","termid":"GO:0001884"},{"relation_name":"is_a","term_name":"deoxyribonucleoside binding","termid":"GO:0032546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside binding","termid":"GO:0032548"}


id: PBO:0083830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ethanol acetyltransferase; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion","termid":"PBO:0083830"}


id: PBO:0041327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 80","termid":"PBO:0041327"}


id: GO:0004047
data:
  {"annotated_genes":["SJAG_02901"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57897],"is_not":false,"summary":null,"term":"GO:0004047"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-[(R)-S(8)-aminomethyldihydrolipoyl]-L-lysyl-[protein] + (6S)-5,6,7,8-tetrahydrofolate = N(6)-[(R)-dihydrolipoyl]-L-lysyl-[protein] + (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + NH4+.","definition_xrefs":["RHEA:16945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aminomethyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["Reactome:R-HSA-5693977","EC:2.1.2.10","MetaCyc:GCVT-RXN"],"synonyms":[{"name":"S-aminomethyldihydrolipoylprotein:(6S)-tetrahydrofolate aminomethyltransferase (ammonia-forming) activity","type":"related"},{"name":"T-protein","type":"related"},{"name":"glycine synthase activity","type":"related"},{"name":"glycine-cleavage system T-protein activity","type":"related"},{"name":"protein-8-S-aminomethyldihydrolipoyllysine:tetrahydrofolate aminomethyltransferase (ammonia-forming) activity","type":"related"},{"name":"protein-S8-aminomethyldihydrolipoyllysine:tetrahydrofolate aminomethyltransferase (ammonia-forming) activity","type":"related"},{"name":"tetrahydrofolate aminomethyltransferase activity","type":"related"}],"termid":"GO:0004047","terms_by_termid":{"GO:0004047":null}}


id: GO:0071346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon gamma is the only member of the type II interferon found so far.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to type II interferon","termid":"GO:0034341"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to type II interferon","synonyms":[{"name":"cellular response to gamma-interferon","type":"related"},{"name":"cellular response to immune interferon","type":"exact"},{"name":"cellular response to interferon-gamma","type":"broad"},{"name":"cellular response to type II IFN","type":"broad"}],"termid":"GO:0071346"}


id: PBO:0029156
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomere_length","termid":"PBO:0029156"}


id: FYPO:0001603
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal level of substance in vacuole","synonyms":[{"name":"normal level of substance in vacuole during mitotic cell cycle","type":"related"},{"name":"normal level of substance in vacuole during vegetative growth","type":"exact"},{"name":"normal vacuolar level of substance","type":"exact"}],"termid":"FYPO:0001603"}


id: MONDO:0017634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anterior uveitis","termid":"MONDO:0006651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"non-infectious anterior uveitis","secondary_identifiers":["MEDGEN:573080","Orphanet:306648","UMLS:C0339317","GARD:21260","SCTID:267619000"],"synonyms":[{"name":"non-infectious iridocyclitis","type":"exact"}],"termid":"MONDO:0017634","xrefs":{"Monarch":{"xref_id":"0017634"}}}


id: MONDO:0003029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant vascular neoplasm arising from the skin.","definition_xrefs":["NCIT:C4489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin sarcoma","termid":"MONDO:0006414"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"skin angiosarcoma","secondary_identifiers":["DOID:4517","MEDGEN:87535","SCTID:254794007","UMLS:C0346081"],"synonyms":[{"name":"angiosarcoma (disease) of zone of skin","type":"exact"},{"name":"angiosarcoma of skin","type":"exact"},{"name":"angiosarcoma of the skin","type":"exact"},{"name":"hemangiosarcoma of skin","type":"exact"},{"name":"hemangiosarcoma of the skin","type":"exact"},{"name":"skin angiosarcoma","type":"exact"},{"name":"skin hemangiosarcoma","type":"exact"},{"name":"zone of skin angiosarcoma (disease)","type":"exact"}],"termid":"MONDO:0003029","xrefs":{"Monarch":{"xref_id":"0003029"}}}


id: PBO:0083619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E1-like protein that activates Urm1p before urmylation; also acts in thiolation of the wobble base of cytoplasmic tRNAs by adenylating and then thiolating Urm1p; receives sulfur from Tum1p","termid":"PBO:0083619"}


id: MOD:00409
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino group with a formamido group.","definition_xrefs":["OMSSA:82","OMSSA:44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formylated residue","termid":"MOD:00493"},{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-formylated residue","synonyms":[{"name":"Formyl","type":"related"},{"name":"NFoRes","type":"exact"},{"name":"ntermformyl","type":"exact"},{"name":"ntermpepformyl","type":"exact"}],"termid":"MOD:00409"}


id: FYPO:0000588
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121333],"is_not":false,"summary":null,"term":"FYPO:0000588"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of ascospore formation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":1,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased sporulation frequency","references_by_uniquename":{"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"increased frequency of ascospore formation","type":"exact"},{"name":"increased sporulation","type":"exact"},{"name":"sporulation: increased","type":"related"}],"termid":"FYPO:0000588","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000588":null}}


id: PBO:0061322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family, member A9","termid":"PBO:0061322"}


id: PBO:0078070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 60 (pseudogene)","termid":"PBO:0078070"}


id: MONDO:0025417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poxvirus infection of poultry and other birds characterized by the formation of wart-like nodules on the skin and diphtheritic necrotic masses (cankers) in the upper digestive and respiratory tracts.","definition_xrefs":["MESH:D005586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fowlpox","synonyms":[{"name":"Bird pox","type":"related"},{"name":"Birdpox","type":"related"},{"name":"Diphtherias, fowl","type":"related"},{"name":"Variola avium","type":"related"},{"name":"diphtheria, fowl","type":"related"},{"name":"epithelioma contagiosum","type":"related"},{"name":"fowl Diphtherias","type":"related"},{"name":"fowl diphtheria","type":"related"},{"name":"fowl pox","type":"related"},{"name":"pox, Bird","type":"related"},{"name":"pox, fowl","type":"related"}],"termid":"MONDO:0025417","xrefs":{"Monarch":{"xref_id":"0025417"}}}


id: PBO:0039986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 6 interacting protein 1","termid":"PBO:0039986"}


id: GO:0050355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + inorganic triphosphate = diphosphate + phosphate.","definition_xrefs":["RHEA:14157","EC:3.6.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"inorganic triphosphate phosphatase activity","secondary_identifiers":["KEGG_REACTION:R00138","MetaCyc:TRIPHOSPHATASE-RXN"],"synonyms":[{"name":"inorganic triphosphatase activity","type":"related"},{"name":"triphosphatase activity","type":"broad"},{"name":"triphosphate phosphohydrolase activity","type":"related"},{"name":"tripolyphosphatase activity","type":"exact"}],"termid":"GO:0050355"}


id: GO:1901982
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to maltose.","definition_xrefs":["GOC:TermGenie","PMID:21566157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide binding","termid":"GO:0048030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"maltose binding","termid":"GO:1901982"}


id: MONDO:0015954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic headache disorder (obsolete MONDO:0015954)","secondary_identifiers":["Orphanet:183509"],"synonyms":[{"name":"rare genetic headache","type":"exact"}],"termid":"MONDO:0015954","xrefs":{"Monarch":{"xref_id":"0015954"}}}


id: GO:0035447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol-2-(L-cysteinylamido)-2-deoxy-alpha-D-glucopyranoside + acetyl-CoA = mycothiol + coA + H+. Mycothiol is also known as AcCys-GlcN-Ins and 1-D-myo-inosityl-2-L-cysteinylamido-2-deoxy-alpha-D-glucopyranoside as Cys-GlcN-Ins or desacetylmycothiol.","definition_xrefs":["PMID:12033919","EC:2.3.1.189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"mycothiol synthase activity","secondary_identifiers":["RHEA:26172","MetaCyc:RXN1G-4"],"synonyms":[{"name":"acetyl-CoA:Cys-GlcN-Ins acetyltransferase","type":"exact"}],"termid":"GO:0035447"}


id: PBO:0042479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 5","termid":"PBO:0042479"}


id: PBO:0091550
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SBA1","termid":"PBO:0091550"}


id: PBO:0082670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Dsl1p tethering complex; this complex interacts with ER SNAREs Sec20p and Use1p; mediates Sey1p-independent homotypic ER fusion; proposed to be involved in protein secretion; localizes to the ER and nuclear envelope","termid":"PBO:0082670"}


id: PBO:0011405
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-chemical,_gene_product,_complex,_cellular_component,_biological_process,_molecular_function,_modification_or_sequence_feature","termid":"PBO:0011405"}


id: GO:2000456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 17 cell extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of CD8-positive, alpha-beta T cell extravasation","termid":"GO:2000450"},{"relation_name":"is_a","term_name":"regulation of T-helper 17 cell extravasation","termid":"GO:2000455"},{"relation_name":"negatively_regulates","term_name":"T-helper 17 cell extravasation","termid":"GO:0035699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T-helper 17 cell extravasation","termid":"GO:2000456"}


id: GO:0050005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-3-(4-methylpent-3-en-1-yl)glutaryl-CoA = 3-(4-methylpent-3-en-1-yl)pent-2-enedioyl-CoA + H2O.","definition_xrefs":["RHEA:24144","EC:4.2.1.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"isohexenylglutaconyl-CoA hydratase activity","secondary_identifiers":["UM-BBD_reactionID:r1167","KEGG_REACTION:R03493","MetaCyc:ISOHEXENYLGLUTACONYL-COA-HYDRATASE-RXN"],"synonyms":[{"name":"3-hydroxy-3-(4-methylpent-3-en-1-yl)glutaryl-CoA hydro-lyase [3-(4-methylpent-3-en-1-yl)pent-2-enedioyl-CoA-forming]","type":"related"},{"name":"3-hydroxy-3-(4-methylpent-3-en-1-yl)glutaryl-CoA hydro-lyase activity","type":"related"},{"name":"3-hydroxy-3-isohexenylglutaryl-CoA-hydrolase activity","type":"related"},{"name":"beta-isohexenylglutaconyl-CoA-hydratase activity","type":"related"},{"name":"isohexenylglutaconyl coenzyme A hydratase activity","type":"related"}],"termid":"GO:0050005"}


id: PBO:0076171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family, cytosolic, 1C, member 2 pseudogene 2","termid":"PBO:0076171"}


id: PBO:0081166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFX antisense RNA 1","termid":"PBO:0081166"}


id: MONDO:0034663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic inflammatory or rheumatoid-like osteoarthropathy (obsolete MONDO:0034663)","termid":"MONDO:0034663","xrefs":{"Monarch":{"xref_id":"0034663"}}}


id: GO:1904015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a serotonin stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:1505525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to monoamine stimulus","termid":"GO:0071868"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to serotonin","termid":"GO:1904014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to serotonin","termid":"GO:1904015"}


id: PBO:0076059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STON1-GTF2A1L readthrough","termid":"PBO:0076059"}


id: PBO:0068831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 69, pseudogene","termid":"PBO:0068831"}


id: GO:0052425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which an organism effects a change in the structure or function of its symbiont organism, mediated by a substance secreted by a type II secretion system in the organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by organism of symbiont morphology or physiology via protein secreted by type II secretion system (obsolete GO:0052425)","synonyms":[{"name":"modification by organism of symbiont morphology or physiology via protein secreted by type II secretion system","type":"exact"}],"termid":"GO:0052425"}


id: MONDO:0014787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0002320"],"is_obsolete":false,"name":"severe intellectual disability-corpus callosum agenesis-facial dysmorphism-cerebellar ataxia syndrome","secondary_identifiers":["Orphanet:466688","MEDGEN:902346","GARD:17824","UMLS:C4225193","OMIM:616819"],"synonyms":[{"name":"Birk-Flusser syndrome","type":"related"},{"name":"CCAFCA","type":"exact"},{"name":"corpus callosum, agenesis OF, with FACIAL anomalies and cerebellar ataxia","type":"related"},{"name":"corpus callosum, agenesis of, with Facial anomalies and cerebellar ataxia","type":"exact"}],"termid":"MONDO:0014787","xrefs":{"Monarch":{"xref_id":"0014787"}}}


id: PBO:0070875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 6","termid":"PBO:0070875"}


id: PR:Q10064
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tra2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized PI3/PI4-kinase family protein C1F5.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.11c","synonyms":[{"name":"Spom972h-tra2","type":"exact"}],"termid":"PR:Q10064"}


id: PBO:0064508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit I","termid":"PBO:0064508"}


id: GO:0031214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of hard tissues that consist mainly of inorganic compounds, and also contain a small amounts of organic matrices that are believed to play important roles in their formation.","definition_xrefs":["PMID:15132736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biomineral tissue development","secondary_identifiers":["Wikipedia:Biomineralization"],"termid":"GO:0031214"}


id: MONDO:0010566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked cone-rod dystrophy","termid":"MONDO:0021155"},{"relation_name":"is_a","term_name":"RPGR-related retinopathy","termid":"MONDO:0100437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"X-linked cone-rod dystrophy 1","secondary_identifiers":["UMLS:C1844776","MEDGEN:336777","GARD:10652","DOID:0111008","MESH:C564438","OMIM:304020"],"synonyms":[{"name":"COD1","type":"exact"},{"name":"CORDX1","type":"exact"},{"name":"X-linked cone dystrophy 1","type":"exact"},{"name":"X-linked cone-rod dystrophy type 1","type":"exact"},{"name":"cone dystrophy 1, X-linked","type":"related"},{"name":"cone dystrophy X-linked 1","type":"related"},{"name":"cone-rod dystrophy X-linked 1","type":"related"},{"name":"cone-rod dystrophy, X-linked, 1","type":"related"},{"name":"cone-rod dystrophy, X-linked, 1, X-linked recessive","type":"exact"},{"name":"cone-rod dystrophy, X-linked, type 1","type":"exact"}],"termid":"MONDO:0010566","xrefs":{"Monarch":{"xref_id":"0010566"}}}


id: GO:0050262
data:
  {"annotated_genes":["SJAG_04693"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115083],"is_not":false,"summary":null,"term":"GO:0050262"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-nicotinamide D-riboside + ATP = beta-nicotinamide D-ribonucleotide + ADP + H+.","definition_xrefs":["RHEA:14017","PMID:17914902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"ribosylnicotinamide kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R02324","GO:0000816","EC:2.7.1.22","MetaCyc:RIBOSYLNICOTINAMIDE-KINASE-RXN","Reactome:R-HSA-8869633","Reactome:R-HSA-8869627"],"synonyms":[{"name":"ATP:N-ribosylnicotinamide 5'-phosphotransferase activity","type":"related"},{"name":"nicotinamide riboside kinase activity","type":"exact"},{"name":"ribosylnicotinamide kinase (phosphorylating)","type":"related"}],"termid":"GO:0050262","terms_by_termid":{"GO:0050262":null}}


id: MONDO:0018901
data:
  {"annotated_genes":["SJAG_03145","SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013261"},{"annotations":[88003,88002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013262"}]},"cv_name":"mondo","definition":"Left ventricular noncompaction (LVNC) is a rare cardiomyopathy characterized anatomically by prominent left ventricular trabeculae and deep intratrabecular recesses causing progressive systolic and diastolic dysfunction, conduction abnormalities, and occasionally thromboembolic events.","definition_xrefs":["Orphanet:54260"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic cardiac malformation (obsolete MONDO:0018797)","termid":"MONDO:0018797"},{"relation_name":"is_a","term_name":"intrinsic cardiomyopathy","termid":"MONDO:0000591"},{"relation_name":"is_a","term_name":"familial cardiomyopathy","termid":"MONDO:0005217"},{"relation_name":"is_a","term_name":"syndromic congenital heart disease","termid":"MONDO:0100614"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03145":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"left ventricular noncompaction","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200231","NCIT:C99544","OMIMPS:604169","UMLS:C1960469","GARD:10985","DOID:0060480","MEDGEN:450531"],"synonyms":[{"name":"LVNC","type":"exact"},{"name":"Lv non-compaction syndrome","type":"exact"},{"name":"left ventricular hypertrabeculation","type":"exact"},{"name":"left ventricular non-compaction cardiomyopathy","type":"exact"},{"name":"left ventricular non-compaction syndrome","type":"exact"},{"name":"left ventricular noncompaction (disease)","type":"exact"},{"name":"spongy myocardium","type":"exact"}],"termid":"MONDO:0018901","terms_by_termid":{"MONDO:0013261":null,"MONDO:0013262":null},"xrefs":{"Monarch":{"xref_id":"0018901"}}}


id: MONDO:0032606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 2","secondary_identifiers":["DOID:0112083","UMLS:C4748737","OMIM:618222","GARD:16312","MEDGEN:1648466"],"synonyms":[{"name":"MC1DN2","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 2","type":"related"}],"termid":"MONDO:0032606","xrefs":{"Monarch":{"xref_id":"0032606"}}}


id: GO:0071894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A histone ubiquitination process in which a ubiquitin monomer is added to a conserved lysine residue in the C-terminus of histone H2B. The conserved lysine residue is K119 in fission yeast, K123 in budding yeast, and K120 in mammals.","definition_xrefs":["GOC:vw","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2B conserved C-terminal lysine ubiquitination (obsolete GO:0071894)","synonyms":[{"name":"budding yeast H2B K123 ubiquitination","type":"narrow"},{"name":"fission yeast H2B K119 ubiquitination","type":"narrow"},{"name":"mammalian H2B K120 ubiquitination","type":"narrow"}],"termid":"GO:0071894"}


id: MONDO:0004687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"background diabetic retinopathy","termid":"MONDO:0001661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"severe nonproliferative diabetic retinopathy","secondary_identifiers":["ICD9:362.06","icd11.foundation:561966379","UMLS:C0730278","MEDGEN:676487","SCTID:312905005","DOID:8946"],"synonyms":[{"name":"high risk non proliferative diabetic retinopathy","type":"exact"},{"name":"severe NPDR","type":"exact"},{"name":"severe nonproliferative diabetic retinopathy","type":"exact"},{"name":"severe nonproliferative retinopathy","type":"related"},{"name":"severe npdr","type":"related"}],"termid":"MONDO:0004687","xrefs":{"Monarch":{"xref_id":"0004687"}}}


id: MONDO:0013327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary hyperoxaluria type 3 (PH3) is a disorder of glyoxylate metabolism that can be asymptomatic or characterized by oxalate nephrolithiasis.","definition_xrefs":["Orphanet:93600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary hyperoxaluria","termid":"MONDO:0002474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"primary hyperoxaluria type 3","secondary_identifiers":["OMIM:613616","MEDGEN:462228","SCTID:734990008","UMLS:C3150878","NCIT:C123214","GARD:10738","DOID:0111672"],"synonyms":[{"name":"HOGA1 primary hyperoxaluria","type":"exact"},{"name":"HP3","type":"related"},{"name":"PH III","type":"related"},{"name":"hyperoxaluria, primary, type 3","type":"related"},{"name":"hyperoxaluria, primary, type III","type":"related"},{"name":"primary hyperoxaluria caused by mutation in HOGA1","type":"exact"},{"name":"primary hyperoxaluria type III","type":"exact"}],"termid":"MONDO:0013327","xrefs":{"Monarch":{"xref_id":"0013327"}}}


id: MONDO:1012628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked form of progressive retinal atrophy that occurs in dogs due to a mutation in the RPGR gene and is characterized by normal photoreceptor morphogenesis, after which progressive rod–cone degeneration develops in the peripheral retina, gradually advancing toward the optic disc.","definition_xrefs":["PMID:32176262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive retinal atrophy, dog","termid":"MONDO:1012226"},{"relation_name":"is_a","term_name":"X-linked disease, non-human animal","termid":"MONDO:1012575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked progressive retinal atrophy 1, RPGR-related, dog","secondary_identifiers":["OMIA:000831-9615"],"synonyms":[{"name":"XLPRA1","type":"exact"},{"name":"progressive retinal atrophy, X-linked, type 1, dog","type":"related"}],"termid":"MONDO:1012628","xrefs":{"Monarch":{"xref_id":"1012628"}}}


id: PBO:0056876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MHC class I polypeptide-related sequence F (pseudogene)","termid":"PBO:0056876"}


id: GO:0060470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that increases the concentration of calcium ions in the cytosol after fertilization or the physiological activation of an egg.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytosolic calcium ion concentration","termid":"GO:0007204"},{"relation_name":"part_of","term_name":"egg activation","termid":"GO:0007343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cytosolic calcium ion concentration involved in egg activation","synonyms":[{"name":"elevation of cytosolic calcium ion concentration involved in egg activation","type":"exact"}],"termid":"GO:0060470"}


id: PBO:0043736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 15","termid":"PBO:0043736"}


id: GO:0060572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which a bud forms from an epithelial sheet. A bud is a protrusion that forms form the sheet by localized folding.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of an epithelial bud","termid":"GO:0060572"}


id: FYPO:0001476
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of guanosine-diphosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abnormal guanosine-diphosphatase activity","synonyms":[{"name":"abnormal GDPase activity","type":"exact"}],"termid":"FYPO:0001476"}


id: GO:0047023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + androsterone = NAD(P)H + H+ + 5-alpha-androstane-3,17-dione.","definition_xrefs":["EC:1.1.1.209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"androsterone dehydrogenase [NAD(P)+] activity","synonyms":[{"name":"3(17)alpha-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"3(or 17)-alpha-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"3(or 17)alpha-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"3(or 17)alpha-hydroxysteroid:NAD(P)+ oxidoreductase activity","type":"broad"}],"termid":"GO:0047023"}


id: GO:0005736
data:
  {"annotated_genes":["SJAG_04261","SJAG_02101","SJAG_01562","SJAG_02653","SJAG_03578","SJAG_02070","SJAG_01698","SJAG_03468","SJAG_02871","SJAG_01765","SJAG_01444","SJAG_00731","SJAG_01313","SJAG_03956","SJAG_04106","SJAG_03144","SJAG_01128"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58366,69186,71857,72822,75920,76301,76953,77307,77514,77621,78313,78736,79271,104468,106832,116214,117526],"is_not":false,"summary":null,"term":"GO:0005736"}]},"cv_name":"cellular_component","definition":"RNA polymerase I, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces rRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerase III and others of which are also found in RNA polymerases II and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template.","definition_xrefs":["GOC:krc","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA-directed RNA polymerase complex","termid":"GO:0055029"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00731":null,"SJAG_01128":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01562":null,"SJAG_01698":null,"SJAG_01765":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02653":null,"SJAG_02871":null,"SJAG_03144":null,"SJAG_03468":null,"SJAG_03578":null,"SJAG_03956":null,"SJAG_04106":null,"SJAG_04261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005730","GO:0005575"],"is_obsolete":false,"name":"RNA polymerase I complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"DNA-directed RNA polymerase I activity","type":"related"},{"name":"DNA-directed RNA polymerase I complex","type":"exact"}],"termid":"GO:0005736","terms_by_termid":{"GO:0005736":null}}


id: PBO:0061648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUDT19 pseudogene 6","termid":"PBO:0061648"}


id: MOD:00849
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a potassium atom for a hydrogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium containing modified residue","synonyms":[{"name":"KRes","type":"exact"}],"termid":"MOD:00849"}


id: PATO:0001791
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being confined or restricted to multiple locations.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multi-localised","synonyms":[{"name":"multi-focal","type":"exact"}],"termid":"PATO:0001791"}


id: PBO:0109024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHLA1 neighbor of OC90","termid":"PBO:0109024"}


id: FYPO:0004346
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at non-coding RNA genes is decreased.","definition_xrefs":["PomBase:mah","PMID:25002536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromatin at ncRNA genes","synonyms":[{"name":"decreased protein localisation to chromatin at ncRNA genes","type":"exact"},{"name":"decreased protein localization to chromatin at ncRNA genes during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at ncRNA genes during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at non-coding RNA genes","type":"exact"},{"name":"reduced protein localization to chromatin at ncRNA genes","type":"exact"}],"termid":"FYPO:0004346"}


id: PBO:0031269
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_assembly","termid":"PBO:0031269"}


id: PBO:0071150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 14","termid":"PBO:0071150"}


id: GO:0033162
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a melanosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule membrane","termid":"GO:0090741"},{"relation_name":"part_of","term_name":"melanosome","termid":"GO:0042470"},{"relation_name":"part_of","term_name":"chitosome","termid":"GO:0045009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"melanosome membrane","termid":"GO:0033162"}


id: PBO:0072792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 2","termid":"PBO:0072792"}


id: PR:O42845
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23A1.07 gene.","definition_xrefs":["UniProtKB:O42845","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C23A1.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23A1.07","synonyms":[{"name":"Spom972h-SPAC23A1.07","type":"exact"}],"termid":"PR:O42845"}


id: GO:0051924
data:
  {"annotated_genes":["SJAG_04551","SJAG_03631","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93095,115354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[104076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of calcium ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metal ion transport","termid":"GO:0010959"},{"relation_name":"regulates","term_name":"calcium ion transport","termid":"GO:0006816"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of calcium ion transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of calcium transport","type":"exact"}],"termid":"GO:0051924","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: GO:2000605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of secondary growth.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of growth","termid":"GO:0045927"},{"relation_name":"is_a","term_name":"regulation of secondary growth","termid":"GO:2000603"},{"relation_name":"positively_regulates","term_name":"secondary growth","termid":"GO:0080117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of secondary growth","termid":"GO:2000605"}


id: PBO:0003361
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.1","termid":"PBO:0003361"}


id: GO:0035248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an N-acetylgalactosaminyl residue from UDP-N-acetyl-galactosamine to an acceptor molecule, forming an alpha-1,4 linkage.","definition_xrefs":["PMID:15130086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"alpha-1,4-N-acetylgalactosaminyltransferase activity","synonyms":[{"name":"alpha-1,4-GalNAc transferase activity","type":"exact"}],"termid":"GO:0035248"}


id: PBO:0076252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptic vesicle glycoprotein 2A","termid":"PBO:0076252"}


id: PBO:0091742
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe CREA homolog","termid":"PBO:0091742"}


id: PBO:0081738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 669","termid":"PBO:0081738"}


id: MONDO:0019980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bilateral renal hypoplasia is a form of renal hypoplasia, a renal developmental anomaly in which both kidneys are small and have a deficit in the number of nephrons present.","definition_xrefs":["Orphanet:97362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal hypoplasia","termid":"MONDO:0019637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal hypoplasia, bilateral","secondary_identifiers":["ICD10CM:Q60.4","SCTID:268232000","MEDGEN:609099","GARD:19374","UMLS:C0431692"],"termid":"MONDO:0019980","xrefs":{"Monarch":{"xref_id":"0019980"}}}


id: PATO:0005020
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering on a bearer by virtue of a bearer's shape lacking in pattern or uniformity; for example, it may have sides of different lengths, different curvatures, or unequal angles.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"irregularly shaped","termid":"PATO:0005020"}


id: GO:0018870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2-aminobenzoate, a derivative of benzoic acid with an NH2 group attached to C2, that occurs in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic benzoate metabolic process","termid":"GO:0018875"},{"relation_name":"is_a","term_name":"anthranilate metabolic process","termid":"GO:0043420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"anaerobic 2-aminobenzoate metabolic process","secondary_identifiers":["UM-BBD_pathwayID:abz"],"synonyms":[{"name":"anaerobic 2-aminobenzoate metabolism","type":"exact"}],"termid":"GO:0018870"}


id: GO:0032992
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A macromolecular complex containing separate protein and carbohydrate molecules. Separate in this context means not covalently bound to each other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein-carbohydrate complex","termid":"GO:0032992"}


id: GO:0046738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The intentional, virally-encoded stimulation of an innate host defense response to viral infection.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete induction of innate immune response in host by virus (obsolete GO:0046738)","synonyms":[{"name":"active induction of innate immune response in host by virus","type":"related"},{"name":"active viral induction of innate immune response in host","type":"exact"}],"termid":"GO:0046738"}


id: GO:0000454
data:
  {"annotated_genes":["SJAG_01234"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76269],"is_not":false,"summary":null,"term":"GO:0000454"}]},"cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine in an rRNA molecule during ribosome biogenesis using a snoRNA guide that targets the position of pseudouridylation.","definition_xrefs":["GOC:curators","ISBN:1555811337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthesis","termid":"GO:0031118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01234":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0044085","GO:0042254"],"is_obsolete":false,"name":"snoRNA guided rRNA pseudouridine synthesis","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0000454","terms_by_termid":{"GO:0000454":null}}


id: PBO:0085019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nicotinamide riboside kinase; catalyzes the phosphorylation of nicotinamide riboside and nicotinic acid riboside in salvage pathways for NAD+ biosynthesis","termid":"PBO:0085019"}


id: PBO:0028360
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_polynucleotide_5'-phosphatase_activity","termid":"PBO:0028360"}


id: GO:0033850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate + isopentenyl diphosphate = 2-cis,6-trans-farnesyl diphosphate + diphosphate.","definition_xrefs":["EC:2.5.1.68","RHEA:23300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016765","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"Z-farnesyl diphosphate synthase activity","secondary_identifiers":["MetaCyc:2.5.1.68-RXN","KEGG_REACTION:R08528"],"synonyms":[{"name":"(Z)-farnesyl diphosphate synthase activity","type":"related"},{"name":"geranyl-diphosphate:isopentenyl-diphosphate geranylcistransferase activity","type":"related"}],"termid":"GO:0033850"}


id: GO:0009638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an organism, or part of an organism, in response to a light stimulus, usually toward or away from it.","definition_xrefs":["GOC:jl","PMID:16870491","GOC:mtg_far_red"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropism","termid":"GO:0009606"},{"relation_name":"is_a","term_name":"response to blue light","termid":"GO:0009637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phototropism","secondary_identifiers":["Wikipedia:Phototropism"],"termid":"GO:0009638"}


id: GO:0098564
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed within the membrane of a trans-Golgi network transport vesicle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi lumen","termid":"GO:0005796"},{"relation_name":"is_a","term_name":"transport vesicle lumen","termid":"GO:0098566"},{"relation_name":"part_of","term_name":"trans-Golgi network transport vesicle","termid":"GO:0030140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005794","GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"trans-Golgi network transport vesicle lumen","termid":"GO:0098564"}


id: GO:0044225
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Portion of a neuron cell soma closest to the point where the apical dendrite emerges.","definition_xrefs":["NIF_Subcellular:sao1186862860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell pole","termid":"GO:0060187"},{"relation_name":"part_of","term_name":"neuronal cell body","termid":"GO:0043025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical pole of neuron","termid":"GO:0044225"}


id: SO:0001569
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant causing a new (functional) splice site.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splicing_variant","termid":"SO:0001568"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic_splice_site_variant","synonyms":[{"name":"cryptic splice site activation","type":"exact"}],"termid":"SO:0001569"}


id: PATO:0002224
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angular shape quality inhering in a bearer by virtue of the bearer's having a single angle in its length giving the bearer the form of the letter V.","definition_xrefs":["PATOC:JE"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angular","termid":"PATO:0001977"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-shaped","termid":"PATO:0002224"}


id: PBO:0053585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 608","termid":"PBO:0053585"}


id: PBO:0070872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 3","termid":"PBO:0070872"}


id: PBO:0116644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 2","termid":"PBO:0116644"}


id: MONDO:0957912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory and toxic neuropathy that is characaterized by a collection of neuropsychological symptoms associated with repeated organophosphate pesticide exposure as well as nerve agent exposure. Symptoms can appear weeks after exposure and include muscle weakness, anxiety, depression, psychosis as well as cognitive and memory deficits.","definition_xrefs":["DOID:0081393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyneuropathy","termid":"MONDO:0001824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"organophosphate-induced delayed polyneuropathy","termid":"MONDO:0957912","xrefs":{"Monarch":{"xref_id":"0957912"}}}


id: MOD:01149
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks the N6-amino of a peptidyl lysine with the carboxyl-terminal glycine of a sumo (Small Ubiquitin-related MOdifier) protein.","definition_xrefs":["PubMed:18688235","PubMed:12612601"],"direct_ancestors":[{"relation_name":"contains","term_name":"N6-glycyl-L-lysine","termid":"MOD:00134"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"sumoylated lysine","termid":"MOD:01149"}


id: PBO:0031373
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_nucleoid_enlarged","termid":"PBO:0031373"}


id: GO:0060200
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A clathrin-sculpted lipid bilayer membrane-enclosed vesicle after clathrin release and containing acetylcholine.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle","termid":"GO:0030133"},{"relation_name":"is_a","term_name":"clathrin-sculpted vesicle","termid":"GO:0060198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"clathrin-sculpted acetylcholine transport vesicle","synonyms":[{"name":"clathrin sculpted acetylcholine constitutive secretory pathway transport vesicle","type":"exact"},{"name":"clathrin sculpted acetylcholine transport vesicle","type":"exact"}],"termid":"GO:0060200"}


id: PBO:0085939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mtc6 is synthetically sick with cdc13-1; SWAT-GFP and mCherry fusion proteins localize to the vacuole while SWAT-GFP fusion also localizes to the endoplasmic reticulum","termid":"PBO:0085939"}


id: GO:0014807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of somitogenesis.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"somitogenesis","termid":"GO:0001756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of somitogenesis","termid":"GO:0014807"}


id: GO:1903121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of TRAIL-activated apoptotic signaling pathway.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:1902041"},{"relation_name":"regulates","term_name":"TRAIL-activated apoptotic signaling pathway","termid":"GO:0036462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of TRAIL-activated apoptotic signaling pathway","synonyms":[{"name":"regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"}],"termid":"GO:1903121"}


id: PBO:0110035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDH1 pseudogene 1","termid":"PBO:0110035"}


id: MONDO:0010703
data:
  {"annotated_genes":["SJAG_00635"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88886],"is_not":false,"summary":null,"term":"MONDO:0010703"}]},"cv_name":"mondo","definition":"Ornithine transcarbamylase deficiency (OTCD) is a disorder of urea cycle metabolism and ammonia detoxification characterized by either a severe, neonatal-onset disease found almost exclusively in males, or later-onset (partial) forms of the disease. Both present with episodes of hyperammonemia that can be fatal and which can lead to neurological complications.","definition_xrefs":["Orphanet:664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urea cycle disorder or inherited hyperammonemia","termid":"MONDO:0800153"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"ornithine carbamoyltransferase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:9271","OMIM:311250","UMLS:C0268542","MedDRA:10052450","icd11.foundation:1822444026","MEDGEN:75692","MESH:D020163","EFO:0007409","NANDO:1200804","NANDO:2200479","GARD:8391","NCIT:C84957","SCTID:80908008"],"synonyms":[{"name":"OCT deficiency","type":"exact"},{"name":"OTC deficiency","type":"exact"},{"name":"OTCD","type":"exact"},{"name":"deficiency of citrulline phosphorylase","type":"exact"},{"name":"ornithine carbamoyltransferase deficiency","type":"exact"},{"name":"ornithine carbamoyltransferase deficiency disease","type":"exact"},{"name":"ornithine transcarbamylase deficiency","type":"exact"},{"name":"ornithine transcarbamylase deficiency, hyperammonemia due to","type":"related"},{"name":"valproate sensitivity","type":"related"}],"termid":"MONDO:0010703","terms_by_termid":{"MONDO:0010703":null},"xrefs":{"Monarch":{"xref_id":"0010703"}}}


id: GO:0097636
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the autophagosome membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mf","GOC:autophagy"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of autophagosome membrane (obsolete GO:0097636)","synonyms":[{"name":"intrinsic component of autophagic vacuole membrane","type":"exact"},{"name":"intrinsic to autophagic vacuole membrane","type":"narrow"}],"termid":"GO:0097636"}


id: PBO:0027888
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H4-K20_methylation","termid":"PBO:0027888"}


id: GO:0018688
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane + O2 + 2 H+ + 2 e- = cis-2,3-dihydrodiol DDT. 1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane is also known as DDT.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete DDT 2,3-dioxygenase activity (obsolete GO:0018688)","termid":"GO:0018688"}


id: PBO:0038871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aarF domain containing kinase 2","termid":"PBO:0038871"}


id: GO:0016753
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a sinapoyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"},{"relation_name":"is_a","term_name":"sinapoyltransferase activity","termid":"GO:0016752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"O-sinapoyltransferase activity","termid":"GO:0016753"}


id: GO:0021620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the hypoglossal nerve. This process pertains to the initial formation of a structure from unspecified parts. This motor nerve innervates all the intrinsic and all but one of the extrinsic muscles of the tongue.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","ISBN:0838580343","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"hypoglossal nerve morphogenesis","termid":"GO:0021618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypoglossal nerve formation","synonyms":[{"name":"CN XII biosynthesis","type":"related"},{"name":"CN XII formation","type":"related"}],"termid":"GO:0021620"}


id: GO:0032139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a dinucleotide insertion or deletion.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA insertion or deletion binding","termid":"GO:0032135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"dinucleotide insertion or deletion binding","synonyms":[{"name":"dinucleotide insertion binding","type":"narrow"}],"termid":"GO:0032139"}


id: PBO:0048461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase 1","termid":"PBO:0048461"}


id: MONDO:0001524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete globe disease (obsolete MONDO:0001524)","termid":"MONDO:0001524","xrefs":{"Monarch":{"xref_id":"0001524"}}}


id: PBO:0004238
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systematic ID does not reflect chromosome","termid":"PBO:0004238"}


id: MONDO:0100525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A newly discovered disorder caused by a change (variant or mutation) in the TCF7L2 gene. This mutation may be responsible for developmental delays in childhood, intellectual disability, autism, myopia, ADHD, abnormal physical features and other problems. There is a wide spectrum of severity for individuals affected with TRND. Many of the symptoms of TRND overlap with other neurodevelopmental disorders. TRND must be diagnosed with a genetic test and cannot be diagnosed by symptoms alone.","definition_xrefs":["PMID:34003604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"TCF7L2-related neurodevelopmental disorder","termid":"MONDO:0100525","xrefs":{"Monarch":{"xref_id":"0100525"}}}


id: PBO:0090433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATPase","termid":"PBO:0090433"}


id: GO:0002583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of peptide antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"regulates","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of peptide antigen","synonyms":[{"name":"regulation of peptide antigen processing and presentation","type":"exact"}],"termid":"GO:0002583"}


id: FYPO:0002300
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of germinated spores with elongated germ tubes and elongated vegetative cells. The elongated cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including germinated spores with elongated germ tubes and elongated cells (obsolete FYPO:0002300)","synonyms":[{"name":"inviable mixed population including germinated spores with elongated germ tubes and long cells","type":"exact"}],"termid":"FYPO:0002300"}


id: MONDO:0017999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fatty acid hydroxylase-associated neurodegeneration (FAHN) is a very rare, autosomal recessive form of neurodegeneration with brain iron accumulation (NBIA) characterized by childhood-onset focal dystonia, progressive spastic paraplegia that progresses to tetra paresis, ataxia, dysarthria, intellectual decline, and oculomotor disturbances (optic atrophy), accompanied by iron deposition in the globus pallidus.","definition_xrefs":["Orphanet:329308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"},{"relation_name":"is_a","term_name":"neurodegeneration with brain iron accumulation","termid":"MONDO:0018307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0002039","MONDO:0005066","MONDO:0005559"],"is_obsolete":false,"name":"fatty acid hydroxylase-associated neurodegeneration","secondary_identifiers":["UMLS:C3668943","MEDGEN:777150","GARD:10810","MESH:C580102","NANDO:1200541"],"synonyms":[{"name":"FAHN","type":"exact"}],"termid":"MONDO:0017999","xrefs":{"Monarch":{"xref_id":"0017999"}}}


id: MONDO:0007924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bannayan-Riley-Ruvalcaba syndrome (BRRS) is a rare congenital disorder characterized by hamartomatous intestinal polyposis, lipomas, macrocephaly and genital lentiginosis.","definition_xrefs":["Orphanet:109"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"intestinal polyposis syndrome","termid":"MONDO:0015185"},{"relation_name":"is_a","term_name":"PTEN hamartoma tumor syndrome","termid":"MONDO:0017623"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Bannayan-Riley-Ruvalcaba syndrome","secondary_identifiers":["MEDGEN:78554","UMLS:C0265326","GARD:5887","icd11.foundation:357383447","ICD9:759.6","NORD:1684","OMIM:153480","SCTID:21984008","DOID:0050657","NCIT:C3939"],"synonyms":[{"name":"BRRS","type":"exact"},{"name":"BZS","type":"related"},{"name":"Bannayan syndrome","type":"exact"},{"name":"Bannayan-Riley-Ruvalcaba syndrome","type":"exact"},{"name":"Bannayan-Zonana syndrome","type":"exact"},{"name":"Myhre-Riley-Smith syndrome","type":"exact"},{"name":"RILEY-SMITH syndrome","type":"exact"},{"name":"RMSS","type":"related"},{"name":"Riley-Smith syndrome","type":"related"},{"name":"Ruvalcaba -Myhre-Smith syndrome","type":"related"},{"name":"Ruvalcaba-MYHRE-SMITH syndrome","type":"exact"},{"name":"Ruvalcaba-Myhre-Smith syndrome","type":"related"},{"name":"macrocephaly multiple lipomas and hemangiomata","type":"related"},{"name":"macrocephaly pseudopapilledema and multiple hemangiomas","type":"related"},{"name":"macrocephaly with multiple lipomas and hemangiomas","type":"exact"},{"name":"macrocephaly, multiple lipomas, and hemangiomata","type":"related"},{"name":"macrocephaly, pseudopapilledema, and multiple hemangiomata","type":"related"}],"termid":"MONDO:0007924","xrefs":{"Monarch":{"xref_id":"0007924"}}}


id: MOD:00880
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct with 6x(13)C labeled 4-sulfophenyl isothiocyanate.","definition_xrefs":["PubMed:15536630","Unimod:464","PubMed:16526082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-sulfophenyl isothiocyanate derivatized residue","termid":"MOD:00584"},{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled 4-sulfophenyl isothiocyanate derivatized residue","synonyms":[{"name":"4-sulfophenyl isothiocyanate (Heavy C13)","type":"related"},{"name":"SPITC:13C(6)","type":"related"}],"termid":"MOD:00880"}


id: GO:0180037
data:
  {"annotated_genes":["SJAG_03276","SJAG_02275","SJAG_01702"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92183,96862,117545],"is_not":false,"summary":null,"term":"GO:0180037"}]},"cv_name":"biological_process","definition":"A cytoplasmic tRNA surveillance pathway that targets mature hypomodified tRNAs, catalyzed by 5'-3' exonucleases Xrn1 (S. cerevisiae/human) and Rat1 (S. cerevisiae) XRN2 human, and regulated by adenosine 3',5' bisphosphate (pAp).","definition_xrefs":["PMID:35901126","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA surveillance","termid":"GO:0106354"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01702":null,"SJAG_02275":null,"SJAG_03276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0006399"],"is_obsolete":false,"name":"rapid tRNA decay","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180037","terms_by_termid":{"GO:0180037":null}}


id: MONDO:0007855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratosis, familial actinic","secondary_identifiers":["MEDGEN:390709","OMIM:148390","MESH:C567190","UMLS:C2675099"],"synonyms":[{"name":"keratosis, familial actinic","type":"exact"}],"termid":"MONDO:0007855","xrefs":{"Monarch":{"xref_id":"0007855"}}}


id: GO:0048572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a day length that falls short of a particular duration known as the 'critical day length'. The critical day length varies between species. Although the term short-day is used, most species actually respond to the duration of the night, so that the response will occur when a period of darkness exceeds the number of hours defined by 24 hours minus the critical day length.","definition_xrefs":["GOC:jid","ISBN:0582015952","ISBN:0697037754","GOC:pj","ISBN:0709408862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoperiodism","termid":"GO:0009648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"short-day photoperiodism","synonyms":[{"name":"long-night photoperiodism","type":"exact"},{"name":"response to long-night","type":"exact"},{"name":"response to short-day","type":"exact"},{"name":"response to short-day photoperiod","type":"related"}],"termid":"GO:0048572"}


id: PR:G2TRU1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC18.20 gene.","definition_xrefs":["UniProtKB:G2TRU1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18.20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.20","synonyms":[{"name":"Spom972h-SPCC18.20","type":"exact"}],"termid":"PR:G2TRU1"}


id: PBO:0027054
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_curved_microtubules","termid":"PBO:0027054"}


id: GO:0033335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anal fin over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medial fin development","termid":"GO:0033338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anal fin development","termid":"GO:0033335"}


id: PATO:0001368
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's having an irregularly toothed edge.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serration","termid":"PATO:0001976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erose","synonyms":[{"name":"jagged","type":"related"}],"termid":"PATO:0001368"}


id: MONDO:0008667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A familial cancer predisposition syndrome associated with a variety of malignant and benign neoplasms, most frequently retinal, cerebellar, and spinal hemangioblastoma, renal cell carcinoma (RCC), and pheochromocytoma.","definition_xrefs":["Orphanet:892"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"multiple polyglandular tumor","termid":"MONDO:0015079"},{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic central nervous system and retinal vascular disease (obsolete MONDO:0015953)","termid":"MONDO:0015953"},{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited nervous system cancer-predisposing syndrome (obsolete MONDO:0016756)","termid":"MONDO:0016756"},{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited renal cancer-predisposing syndrome (obsolete MONDO:0017891)","termid":"MONDO:0017891"},{"relation_name":"excluded_subClassOf","term_name":"familial cystic renal disease","termid":"MONDO:0019741"},{"relation_name":"excluded_subClassOf","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"excluded_subClassOf","term_name":"obsolete disorder of central nervous system or retinal vasculature (obsolete MONDO:0020676)","termid":"MONDO:0020676"},{"relation_name":"excluded_subClassOf","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"neurocutaneous syndrome","termid":"MONDO:0042983"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Hippel-Lindau disease","secondary_identifiers":["icd11.foundation:1985408165","MedDRA:10047716","ICD9:759.6","NANDO:2200408","UMLS:C0019562","NANDO:2200829","DOID:14175","GARD:7855","MEDGEN:42458","MESH:D006623","NCIT:C3105","NORD:1830","OMIM:193300","SCTID:46659004"],"synonyms":[{"name":"Hippel Lindau syndrome","type":"exact"},{"name":"Lindau disease","type":"exact"},{"name":"VHL","type":"exact"},{"name":"VHL syndrome","type":"related"},{"name":"Von Hippel Lindau disease","type":"related"},{"name":"Von Hippel-Lindau syndrome","type":"exact"},{"name":"Von Hippel-Lindau syndrome (VHL)","type":"exact"},{"name":"Von Hippel-Lindau syndrome, Modifiers of","type":"related"},{"name":"cerebroretinal angiomatosis","type":"exact"},{"name":"familial cerebelloretinal angiomatosis","type":"exact"},{"name":"von Hippel-Lindau disease","type":"exact"},{"name":"von Hippel-Lindau syndrome","type":"exact"},{"name":"von Hippel-Lindau syndrome, modifier of","type":"exact"}],"termid":"MONDO:0008667","xrefs":{"Monarch":{"xref_id":"0008667"}}}


id: PBO:0075814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single stranded DNA binding protein 4","termid":"PBO:0075814"}


id: GO:1900084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of peptidyl-tyrosine autophosphorylation.","definition_xrefs":["GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein autophosphorylation","termid":"GO:0031952"},{"relation_name":"is_a","term_name":"regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050730"},{"relation_name":"regulates","term_name":"peptidyl-tyrosine autophosphorylation","termid":"GO:0038083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidyl-tyrosine autophosphorylation","synonyms":[{"name":"regulation of receptor tyrosine kinase autophosphorylation","type":"narrow"},{"name":"regulation of tyrosine autophosphorylation","type":"exact"}],"termid":"GO:1900084"}


id: MONDO:0025028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral disease caused by at least two distinct species (serotypes) in the vesiculovirus genus: vesicular stomatitis indiana virus and vesicular stomatitis new jersey virus. It is characterized by vesicular eruptions on the oral mucosa in cattle, horses, pigs, and other animals. In humans, vesicular stomatitis causes an acute influenza-like illness.","definition_xrefs":["MESH:D054243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rhabdoviridae infectious disease, non-human animal","termid":"MONDO:0700072"},{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"mouth mucosa disorder, non-human animal","termid":"MONDO:1011334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicular stomatitis","secondary_identifiers":["SCTID:36921006"],"synonyms":[{"name":"Stomatitides, vesicular","type":"related"},{"name":"stomatitis, vesicular","type":"related"},{"name":"vesicular Stomatitides","type":"related"}],"termid":"MONDO:0025028","xrefs":{"Monarch":{"xref_id":"0025028"}}}


id: PBO:0082830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved protein of the mitochondrial matrix; performs a scaffolding function during assembly of iron-sulfur clusters, interacts physically and functionally with yeast frataxin (Yfh1p); ISU1 has a paralog, ISU2, that arose from the whole genome duplication; isu1 isu2 double mutant is inviable; human homolog ISCU implicated in mitochondrial myopathy, can complement isu1 isu2 double mutant","termid":"PBO:0082830"}


id: GO:0044678
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that in Methanobacterium thermoautotrophicum is composed of six subunits, and in Methanosarcina barkeri contains is composed of either two subunits or nine subunits. Catalyzes the conversion of coenzyme B, coenzyme M, and methanophenazine to form N-{7-[(2-sulfoethyl)dithio]heptanoyl}-3-O-phospho-L-threonine and dihydromethanophenazine.","definition_xrefs":["PMID:9063468","PMID:8174566","GOC:mengo_curators","PMID:8119281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CoB-CoM heterodisulfide reductase complex","synonyms":[{"name":"coenzyme M-7-mercaptoheptanoylthreonine-phosphate-heterodisulfide hydrogenase complex","type":"exact"},{"name":"hydrogen:coenzyme-M-7-mercaptoheptanoylthreonine-phosphate-heterodisulfide oxidoreductase complex","type":"exact"}],"termid":"GO:0044678"}


id: PBO:0031842
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endoplasmic_reticulum_morphology","termid":"PBO:0031842"}


id: MONDO:0958034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial partial lipodystrophy","termid":"MONDO:0020088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"lipodystrophy, familial partial, type 9","secondary_identifiers":["MEDGEN:1845936","OMIM:620683","UMLS:C5882746"],"termid":"MONDO:0958034","xrefs":{"Monarch":{"xref_id":"0958034"}}}


id: GO:0045024
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of bonds after acidic amino acids and after branched chain amino acids.","definition_xrefs":["PMID:11735414"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-glutamyl peptide hydrolyzing enzyme activity (obsolete GO:0045024)","synonyms":[{"name":"peptidyl-glutamyl peptide hydrolyzing enzyme activity","type":"exact"}],"termid":"GO:0045024"}


id: PBO:0034059
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_start_sequence_of","termid":"PBO:0034059"}


id: GO:2001228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to gamma radiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to gamma radiation","termid":"GO:0010332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to gamma radiation","synonyms":[{"name":"regulation of response to gamma ray","type":"related"},{"name":"regulation of response to gamma-ray photon","type":"related"}],"termid":"GO:2001228"}


id: PBO:0063022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 2","termid":"PBO:0063022"}


id: PBO:0071261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23 pseudogene 6","termid":"PBO:0071261"}


id: GO:0051776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a chemical stimulus indicating redox state is received and converted into a molecular signal. Redox state refers to the balance of oxidized versus reduced forms of electron donors and acceptors in an organelle, cell or organ; plastoquinone, glutathione (GSH/GSSG), and nicotinamide nucleotides (NAD+/NADH and NADP+/NADPH) are among the most important.","definition_xrefs":["PMID:16987039","GOC:mah","PMID:15131240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to redox state","termid":"GO:0051775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of redox state","synonyms":[{"name":"redox sensing","type":"exact"}],"termid":"GO:0051776"}


id: GO:0071760
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgY isotype and two identical immunoglobulin light chains, held together by disulfide bonds. An IgY immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"IgY immunoglobulin complex","termid":"GO:0071760"}


id: GO:0072089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of stem cells, resulting in the expansion of a stem cell population. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem cell proliferation","termid":"GO:0072089"}


id: PBO:0081038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 14","termid":"PBO:0081038"}


id: MONDO:0010085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Schilder's disease is a progressive demyelinating disorder of the central nervous system.","definition_xrefs":["Orphanet:59298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demyelinating disease","termid":"MONDO:0002562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"Schilder disease","secondary_identifiers":["OMIM:272100","MEDGEN:3324","SCTID:49692006","UMLS:C0007795","GARD:16661","ICD9:341.1"],"synonyms":[{"name":"Schilder disease","type":"exact"},{"name":"Schilder's disease","type":"exact"},{"name":"myelinoclastic diffuse sclerosis","type":"exact"},{"name":"sudanophillic cerebral sclerosis","type":"related"}],"termid":"MONDO:0010085","xrefs":{"Monarch":{"xref_id":"0010085"}}}


id: SO:0001083
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Indicates that two consecutive residues in a fragment sequence are not consecutive in the full-length protein and that there are a number of unsequenced residues between them.","definition_xrefs":["EBIBS:GAR","UniProt:curation_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_sequencing_information","termid":"SO:0001082"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_adjacent_residues","secondary_identifiers":["BS:00182"],"synonyms":[{"name":"non consecutive","type":"exact"},{"name":"non_cons","type":"exact"}],"termid":"SO:0001083"}


id: GO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Peripheral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; can be extracted from membrane fraction with high concentrations of salt or high pH.","definition_xrefs":["PMID:10512869"],"gene_count":0,"genotype_count":0,"name":"obsolete peripheral to membrane of membrane fraction (obsolete GO:0000300)","synonyms":[{"name":"peripheral to membrane of membrane fraction","type":"exact"}],"termid":"GO:0000300"}


id: MOD:01012
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively oxidizes the disulfide bond of a cystine crosslink to form two cysteic acid residues.","definition_xrefs":["DeltaMass:335"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"L-cystine (cross-link)","termid":"MOD:00034"},{"relation_name":"is_a","term_name":"L-cysteic acid (L-cysteine sulfonic acid)","termid":"MOD:00460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"oxidation of disulfide crosslink in cystine to two cysteic acids","termid":"MOD:01012"}


id: GO:0048091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of a pattern of pigment in females.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental pigmentation","termid":"GO:0048087"},{"relation_name":"is_a","term_name":"regulation of female pigmentation","termid":"GO:0048089"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"female pigmentation","termid":"GO:0048095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of female pigmentation","synonyms":[{"name":"activation of female pigmentation","type":"narrow"},{"name":"stimulation of female pigmentation","type":"narrow"},{"name":"up regulation of female pigmentation","type":"exact"},{"name":"up-regulation of female pigmentation","type":"exact"},{"name":"upregulation of female pigmentation","type":"exact"}],"termid":"GO:0048091"}


id: GO:0051710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the cytolysis by an organism of cells in another organism.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cytolysis in another organism (obsolete GO:0051710)","synonyms":[{"name":"regulation of cytolysis in other organism","type":"exact"},{"name":"regulation of cytolysis of cells of another organism","type":"exact"}],"termid":"GO:0051710"}


id: GO:0008316
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the vitelline membrane of an egg. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah","GOC:sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of vitelline membrane","termid":"GO:0008316"}


id: PBO:0062016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 6 pseudogene","termid":"PBO:0062016"}


id: PBO:0055376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2805","termid":"PBO:0055376"}


id: GO:0090413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any negative regulation of transcription from RNA polymerase II promoter that is involved in fatty acid biosynthetic process.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter involved in fatty acid biosynthetic process (obsolete GO:0090413)","synonyms":[{"name":"negative regulation of transcription from RNA polymerase II promoter involved in fatty acid biosynthetic process","type":"exact"}],"termid":"GO:0090413"}


id: MONDO:0012190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 7, with nephropathy and deafness","secondary_identifiers":["MEDGEN:323004","MESH:C563798","Orphanet:300333","GARD:17367","OMIM:609057","UMLS:C1836823"],"synonyms":[{"name":"epidermolysis bullosa simplex 7, with nephropathy and deafness","type":"exact"},{"name":"nephropathy with pretibial epidermolysis bullosa and deafness","type":"related"},{"name":"nephrotic syndrome - deafness - pretibial epidermolysis bullosa syndrome","type":"exact"},{"name":"nephrotic syndrome-hearing loss-pretibial epidermolysis bullosa syndrome","type":"exact"}],"termid":"MONDO:0012190","xrefs":{"Monarch":{"xref_id":"0012190"}}}


id: MONDO:1012075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple exostoses, non-human animal","termid":"MONDO:1011944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple exostoses, pig","secondary_identifiers":["OMIA:000354-9823"],"termid":"MONDO:1012075","xrefs":{"Monarch":{"xref_id":"1012075"}}}


id: MONDO:0054802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial polycythemia","termid":"MONDO:0001115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"erythrocytosis, familial, 7","secondary_identifiers":["DOID:0111631","MEDGEN:1642594","OMIM:617981","UMLS:C4693823"],"synonyms":[{"name":"ECYT7","type":"related"},{"name":"erythrocytosis 7","type":"exact"},{"name":"erythrocytosis, Alpha-globin type","type":"related"},{"name":"erythrocytosis, FAMILIAL, 7","type":"related"},{"name":"polycythemia, Alpha-globin type","type":"related"}],"termid":"MONDO:0054802","xrefs":{"Monarch":{"xref_id":"0054802"}}}


id: PBO:0076649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 4","termid":"PBO:0076649"}


id: PBO:0017964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate reductase Mtd1 (predicted)","termid":"PBO:0017964"}


id: PBO:0088910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP6 catalytic subunit Ppe1","termid":"PBO:0088910"}


id: PBO:0036481
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat consensus HHDNSNKESTNLDDLNMLEEPK","termid":"PBO:0036481"}


id: PBO:0091926
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wee1 can modulate the probability of entering mitosis at a given cell size","termid":"PBO:0091926"}


id: GO:0033665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which the symbiont regulates the increase in its size or mass, or its progression from an initial condition to a later condition, within the cells or tissues of the host organism. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down. The host is defined as the larger of the organisms involved in the symbiotic interaction.","definition_xrefs":["GOC:dph","GOC:pamgo_curators","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of growth or development of symbiont in host (obsolete GO:0033665)","synonyms":[{"name":"modulation of growth or development of organism within host","type":"exact"},{"name":"modulation of growth or development of symbiont within host","type":"exact"},{"name":"modulation of invasive growth","type":"broad"},{"name":"regulation of growth or development of symbiont in host","type":"exact"},{"name":"regulation of growth or development of symbiont within host","type":"exact"}],"termid":"GO:0033665"}


id: PR:O74466
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1739.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1739.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.04c","synonyms":[{"name":"Spom972h-SPCC1739.04c","type":"exact"}],"termid":"PR:O74466"}


id: PBO:0089586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial processing peptidase (MPP) complex beta subunit Mas1","termid":"PBO:0089586"}


id: PBO:0061636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUDT16 divergent transcript","termid":"PBO:0061636"}


id: PBO:0081855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger family member 788, pseudogene","termid":"PBO:0081855"}


id: PBO:0066176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB transcriptional corepressor like 2","termid":"PBO:0066176"}


id: PBO:0046075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1","termid":"PBO:0046075"}


id: PBO:0026870
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_methylation_at_mating_type_locus","termid":"PBO:0026870"}


id: PBO:0040626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BANF1 pseudogene 5","termid":"PBO:0040626"}


id: GO:0008286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of the insulin receptor binding to insulin.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"},{"relation_name":"part_of","term_name":"cellular response to insulin stimulus","termid":"GO:0032869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"insulin receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-74752"],"synonyms":[{"name":"daf-2 receptor signaling pathway","type":"narrow"},{"name":"insulin receptor signalling pathway","type":"exact"}],"termid":"GO:0008286"}


id: MONDO:0004350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinoblastoma during childhood that has spread beyond the eye.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extraocular retinoblastoma","termid":"MONDO:0003078"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"pediatric extraocular retinoblastoma","secondary_identifiers":["NCIT:C9048","MEDGEN:230837","DOID:7747","UMLS:C1321870"],"synonyms":[{"name":"childhood extraocular retinoblastoma","type":"exact"},{"name":"childhood metastatic retinoblastoma","type":"exact"},{"name":"extraocular retinoblastoma","type":"broad"},{"name":"extraocular retinoblastoma of childhood","type":"exact"},{"name":"pediatric extraocular retinoblastoma","type":"exact"}],"termid":"MONDO:0004350","xrefs":{"Monarch":{"xref_id":"0004350"}}}


id: MONDO:0003313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare sarcoma that arises from the vagina. This category includes low grade endometrioid stromal sarcoma and undifferentiated vaginal sarcoma.","definition_xrefs":["NCIT:C40270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vagina sarcoma","termid":"MONDO:0002140"},{"relation_name":"is_a","term_name":"endometrioid stromal and related neoplasms of the vagina","termid":"MONDO:0003314"},{"relation_name":"is_a","term_name":"endometrioid stromal sarcoma","termid":"MONDO:0006745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"endometrioid stromal sarcoma of the vagina","secondary_identifiers":["DOID:5170","UMLS:C3642329","MEDGEN:770969"],"synonyms":[{"name":"endometrioid stromal sarcoma of the vagina","type":"exact"},{"name":"endometrioid stromal sarcoma of vagina","type":"exact"},{"name":"vagina endometrioid stromal sarcoma","type":"exact"},{"name":"vaginal endometrial stromal sarcoma","type":"related"}],"termid":"MONDO:0003313","xrefs":{"Monarch":{"xref_id":"0003313"}}}


id: PBO:0083018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a discrete protein; YFR024C was originally annotated as a separate ORF, but was later removed because it was demonstrated to be theC-terminus of LSB3/YFR024C-A","termid":"PBO:0083018"}


id: PR:P0CT56
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1401 gene.","definition_xrefs":["UniProtKB:P0CT56","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S14-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.05c","synonyms":[{"name":"Spom972h-rps1401","type":"exact"}],"termid":"PR:P0CT56"}


id: GO:0044558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which the extent of smooth muscle contraction is reduced in the uterus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"relaxation of smooth muscle","termid":"GO:0044557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uterine smooth muscle relaxation","synonyms":[{"name":"smooth muscle relaxation of the uterus","type":"exact"}],"termid":"GO:0044558"}


id: MONDO:0008429
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Singleton-Merten dysplasia is characterized by dental dysplasia, progressive calcification of the thoracic aorta with stenosis, osteoporosis and expansion of the marrow cavities in hand bones. Additional features included generalized muscle weakness and atrophy, and chronic psoriasiform skin eruptions. It has been reported in four unrelated patients (male and female) and in a family with multiple affected members (male).","definition_xrefs":["Orphanet:85191"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"type 1 interferonopathy of childhood","termid":"MONDO:0957408"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Singleton-Merten dysplasia","secondary_identifiers":["NORD:1718","OMIMPS:182250","UMLS:C0432254","SCTID:254114000","ICD9:733.29","GARD:122","MEDGEN:98481","MESH:C537343","icd11.foundation:1084593684"],"synonyms":[{"name":"Merten-Singleton syndrome","type":"exact"},{"name":"SGMRT1","type":"related"},{"name":"SM syndrome","type":"related"},{"name":"Singleton Merten syndrome","type":"exact"},{"name":"Singleton-Merten syndrome","type":"exact"},{"name":"singleton Merten syndrome","type":"exact"},{"name":"syndrome of widened medullary cavities of the metacarpals and phalanges, aortic calcification and abnormal dentition","type":"related"},{"name":"widened medullary cavities of bone, aortic calcification, abnormal dentition, and muscular weakness","type":"related"}],"termid":"MONDO:0008429","xrefs":{"Monarch":{"xref_id":"0008429"}}}


id: GO:0004488
data:
  {"annotated_genes":["SJAG_04156","SJAG_00106","SJAG_01126"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57825,77469,78356],"is_not":false,"summary":null,"term":"GO:0004488"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + NADP+ = 5,10-methenyltetrahydrofolate + NADPH.","definition_xrefs":["EC:1.5.1.5","RHEA:22812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_01126":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R01220","MetaCyc:METHYLENETHFDEHYDROG-NADP-RXN"],"synonyms":[{"name":"5,10-methylenetetrahydrofolate:NADP oxidoreductase activity","type":"related"},{"name":"5,10-methylenetetrahydrofolate:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0004488","terms_by_termid":{"GO:0004488":null}}


id: PBO:0062370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily A member 8 pseudogene","termid":"PBO:0062370"}


id: PBO:0116849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsk1 complex cyclin-dependent protein kinase Lsk1","termid":"PBO:0116849"}


id: PBO:0085347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipase B (lysophospholipase) involved in lipid metabolism; required for efficient acyl chain remodeling of newly synthesized phosphatidylethanolamine-derived phosphatidylcholine; required for deacylation of phosphatidylcholine and phosphatidylethanolamine but not phosphatidylinositol; PLB1 has a paralog, PLB3, that arose from the whole genome duplication","termid":"PBO:0085347"}


id: PBO:0062113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 12","termid":"PBO:0062113"}


id: PBO:0076655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 18","termid":"PBO:0076655"}


id: GO:1990869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemokine stimulus.","definition_xrefs":["PMID:11113082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"},{"relation_name":"is_a","term_name":"response to chemokine","termid":"GO:1990868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to chemokine","termid":"GO:1990869"}


id: MONDO:0020509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Secondary syringomyelia is a rare medullar disease defined as a development of a fluid-filled cavity or syrinx within the spinal cord due to blockage of CSF circulation (e.g., due to basal archnoiditis, meningeal carcinomatosis, various mass lesions), spinal cord injury (e.g., due to trauma, radiation necrosis, hemorrhage, spinal abscess), spinal dysraphism or intramedullary tumors. It presents with neuropathic pain, numbness, muscular weakness, changes in tone or spasticity or autonomic changes (hyperhidrosis, heart rate or blood pressure instability). Selective loss of pain and temperature with relative preservation of dorsal column function (touch and pressure) are classic findings.","definition_xrefs":["Orphanet:99857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syringomyelia","termid":"MONDO:0017987"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary syringomyelia","secondary_identifiers":["MEDGEN:1649806","UMLS:C4749399","GARD:19692"],"termid":"MONDO:0020509","xrefs":{"Monarch":{"xref_id":"0020509"}}}


id: FYPO:0003210
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a septum that is in an abnormal location and is not perpendicular to the long axis of the cell. The normal location is at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized septum during vegetative growth","termid":"FYPO:0000339"},{"relation_name":"is_a","term_name":"misoriented septum during vegetative growth","termid":"FYPO:0001390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000032","FYPO:0000631","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"mislocalized, misoriented septum","synonyms":[{"name":"abnormal septum localization and orientation","type":"related"},{"name":"abnormal septum location and orientation","type":"exact"},{"name":"abnormal septum position and orientation","type":"exact"},{"name":"abnormal septum positioning and orientation","type":"related"},{"name":"asymmetric, misoriented septum","type":"exact"},{"name":"asymmetrically located, misoriented septum","type":"exact"},{"name":"mislocalised, misoriented septum","type":"exact"},{"name":"mislocalized, misoriented septum during mitotic cell cycle","type":"related"},{"name":"mislocalized, misoriented septum during vegetative growth","type":"exact"},{"name":"misplaced, misoriented septum","type":"exact"}],"termid":"FYPO:0003210"}


id: PR:Q9P6J7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1683.03c gene.","definition_xrefs":["UniProtKB:Q9P6J7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C1683.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.03c","synonyms":[{"name":"Spom972h-SPBC1683.03c","type":"exact"}],"termid":"PR:Q9P6J7"}


id: GO:0003085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that reduces the force with which blood travels through the systemic arterial circulatory system.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of blood pressure","termid":"GO:0045776"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of systemic arterial blood pressure","termid":"GO:0003085"}


id: PBO:0017812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoenolpyruvate transmembrane transporter Pet3","termid":"PBO:0017812"}


id: GO:0052219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on, within or near a second organism towards a lower level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative energy taxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052219)","synonyms":[{"name":"negative energy taxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"negative energy taxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052219"}


id: MONDO:0009687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital myasthenic syndrome","termid":"MONDO:0018940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"myasthenia, congenital, refractory to acetylcholinesterase inhibitors","secondary_identifiers":["MEDGEN:338127","MESH:C564979","OMIM:254190","UMLS:C1850806"],"synonyms":[{"name":"myasthenia, congenital, refractory to acetylcholinesterase inhibitors","type":"exact"}],"termid":"MONDO:0009687","xrefs":{"Monarch":{"xref_id":"0009687"}}}


id: PBO:0036011
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_threonine_phosphorylation_during_vegetative_growth","termid":"PBO:0036011"}


id: GO:0046404
data:
  {"annotated_genes":["SJAG_02680","SJAG_01979"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72448,89990],"is_not":false,"summary":null,"term":"GO:0046404"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 5'-dephospho-DNA = ADP + 5'-phospho-DNA.","definition_xrefs":["RHEA:15669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent polynucleotide 5'-hydroxyl-kinase activity","termid":"GO:0051734"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01979":null,"SJAG_02680":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R03840","MetaCyc:POLYNUCLEOTIDE-5-HYDROXYL-KINASE-RXN"],"synonyms":[{"name":"ATP-dependent DNA kinase activity","type":"exact"},{"name":"polydeoxyribonucleotide 5'-hydroxyl-kinase activity","type":"broad"}],"termid":"GO:0046404","terms_by_termid":{"GO:0046404":null}}


id: PBO:0013836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline transmembrane transporter family protein Ctl1","termid":"PBO:0013836"}


id: GO:0085036
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space between the symbiont plasma membrane and the extrahaustorial membrane of the host.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"},{"relation_name":"part_of","term_name":"host extracellular space","termid":"GO:0043655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"extrahaustorial matrix","termid":"GO:0085036"}


id: PBO:0002118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Vps8 (predicted)","termid":"PBO:0002118"}


id: GO:1904895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an ESCRT complex.","definition_xrefs":["GO_REF:0000079","GOC:PARL","GOC:TermGenie","PMID:21118109","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"ESCRT complex assembly","synonyms":[{"name":"ESCRT complex formation","type":"exact"},{"name":"endosomal sorting complex required for transport assembly","type":"exact"},{"name":"endosomal sorting complex required for transport formation","type":"exact"}],"termid":"GO:1904895"}


id: PBO:0076815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENM2 antisense RNA 2","termid":"PBO:0076815"}


id: MONDO:0021722
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vulvodynia is a chronic pain syndrome that affects the vulvar area and occurs without an identifiable cause. Symptoms typically include a feeling of burning or irritation. For the diagnosis to be made symptoms must last at least 3 months.","definition_xrefs":["Wikipedia:Vulvodynia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"neurological pain disorder","termid":"MONDO:0700057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulvodynia","secondary_identifiers":["ICD9:625.70","MEDGEN:96066","icd11.foundation:1539507119","MESH:D056650","SCTID:238968009","UMLS:C0406670"],"synonyms":[{"name":"vulvodynia","type":"exact"}],"termid":"MONDO:0021722","xrefs":{"Monarch":{"xref_id":"0021722"}}}


id: PBO:0062753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily L member 2 pseudogene","termid":"PBO:0062753"}


id: PBO:0058078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4296","termid":"PBO:0058078"}


id: PR:O59802
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphatidylinositol N-acetylglucosaminyltransferase subunit C that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04589","PRO:DNx","PANTHER:PTHR12982:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol N-acetylglucosaminyltransferase GPI2 subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.04c","secondary_identifiers":["UniProtKB:O59802"],"synonyms":[{"name":"Spom972h-PIGC","type":"exact"}],"termid":"PR:O59802"}


id: MONDO:0003981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cervix small cell carcinoma (obsolete MONDO:0003981)","termid":"MONDO:0003981","xrefs":{"Monarch":{"xref_id":"0003981"}}}


id: GO:1904925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of autophagy of the mitochondrion in response to mitochondrial depolarization.","definition_xrefs":["GOC:pad","GOC:TermGenie","GOC:PARL","PMID:22020285","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of autophagy of mitochondrion in response to mitochondrial depolarization (obsolete GO:1904925)","termid":"GO:1904925"}


id: MONDO:0014996
data:
  {"annotated_genes":["SJAG_04704"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88865],"is_not":false,"summary":null,"term":"MONDO:0014996"}]},"cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the ELP2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04704":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 58","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617270","GARD:13361","UMLS:C4310641","MEDGEN:934608","DOID:0081220"],"synonyms":[{"name":"ELP2 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"ELP2-related disorder","type":"related"},{"name":"MRT58","type":"exact"},{"name":"autosomal recessive intellectual disability 58","type":"related"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in ELP2","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 58","type":"exact"},{"name":"intellectual disability, autosomal recessive 58","type":"exact"},{"name":"intellectual disability, autosomal recessive type 58","type":"exact"},{"name":"mental retardation, autosomal recessive 58","type":"exact"},{"name":"mental retardation, autosomal recessive type 58","type":"exact"}],"termid":"MONDO:0014996","terms_by_termid":{"MONDO:0014996":null},"xrefs":{"Monarch":{"xref_id":"0014996"}}}


id: FYPO:0005958
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dephosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein dephosphorylation during vegetative growth","termid":"FYPO:0005957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"decreased protein dephosphorylation during mitosis","synonyms":[{"name":"decreased protein dephosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"decreased protein dephosphorylation during mitotic M phase","type":"related"},{"name":"decreased protein dephosphorylation during mitotic M-phase","type":"related"},{"name":"decreased protein dephosphorylation during mitotic nuclear division","type":"exact"},{"name":"decreased protein/peptide dephosphorylation during mitosis","type":"exact"},{"name":"reduced protein dephosphorylation during mitosis","type":"exact"}],"termid":"FYPO:0005958"}


id: PBO:0051241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-53-1 (pseudogene)","termid":"PBO:0051241"}


id: PBO:0062463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 154 pseudogene","termid":"PBO:0062463"}


id: GO:0034928
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-hydroxypyrene + O2 + 2 H+ + 2 e- = 1-hydroxypyrene-6,7-oxide + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-hydroxypyrene 6,7-monooxygenase activity (obsolete GO:0034928)","termid":"GO:0034928"}


id: PR:O13875
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B3.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized Sel1-like repeat-containing protein C1B3.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.10c","synonyms":[{"name":"Spom972h-SPAC1B3.10c","type":"exact"}],"termid":"PR:O13875"}


id: GO:0050426
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + peptidyl-glycinamide = glycinamide + peptide. Cleavage of C-terminal glycinamide from a polypeptide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-glycinamidase activity (obsolete GO:0050426)","synonyms":[{"name":"peptidyl-glycinamidase activity","type":"exact"}],"termid":"GO:0050426"}


id: PBO:0082445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bud tip localized protein of unknown function; mRNA is targeted to the bud by a She2p dependent transport system; mRNA is cell cycle regulated via Fkh2p, peaking in G2/M phase; null mutant displays increased levels of spontaneous Rad52p foc","termid":"PBO:0082445"}


id: GO:0008691
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-hydroxybutanoyl-CoA + NADP+ = 3-acetoacetyl-CoA + NADPH + H+.","definition_xrefs":["EC:1.1.1.157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-hydroxybutyryl-CoA dehydrogenase activity","secondary_identifiers":["RHEA:16197","MetaCyc:3-HYDROXYBUTYRYL-COA-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(S)-3-hydroxybutanoyl-CoA:NADP+ oxidoreductase activity","type":"related"},{"name":"BHBD activity","type":"related"},{"name":"L(+)-3-hydroxybutyryl-CoA dehydrogenase activity","type":"related"},{"name":"L-(+)-3-hydroxybutyryl-CoA dehydrogenase activity","type":"related"},{"name":"beta-hydroxybutyryl coenzyme A dehydrogenase activity","type":"related"},{"name":"beta-hydroxybutyryl-CoA dehydrogenase activity","type":"related"},{"name":"dehydrogenase, L-3-hydroxybutyryl coenzyme A (nicotinamide adenine dinucleotide phosphate)","type":"related"}],"termid":"GO:0008691"}


id: PBO:0065524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patched 1","termid":"PBO:0065524"}


id: PBO:0043517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP5 divergent transcript","termid":"PBO:0043517"}


id: GO:0048406
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to nerve growth factor (NGF).","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotrophin binding","termid":"GO:0043121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"nerve growth factor binding","synonyms":[{"name":"NGF binding","type":"exact"},{"name":"beta-nerve growth factor binding","type":"exact"},{"name":"neurotrophin TRKA receptor activity","type":"related"}],"termid":"GO:0048406"}


id: MONDO:0019777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Carpenter-Waziri syndrome (obsolete MONDO:0019777)","termid":"MONDO:0019777","xrefs":{"Monarch":{"xref_id":"0019777"}}}


id: PBO:0072599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"remodeling and spacing factor 1","termid":"PBO:0072599"}


id: PBO:0089361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin","termid":"PBO:0089361"}


id: PR:P21696
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gpd1 gene.","definition_xrefs":["UniProtKB:P21696","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase [NAD(+)] 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.05","synonyms":[{"name":"GPD-C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GPDH-C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gpd1","type":"exact"}],"termid":"PR:P21696"}


id: GO:0046271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aromatic derivatives of trans-cinnamic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"phenylpropanoid catabolic process","synonyms":[{"name":"phenylpropanoid breakdown","type":"exact"},{"name":"phenylpropanoid catabolism","type":"exact"},{"name":"phenylpropanoid degradation","type":"exact"}],"termid":"GO:0046271"}


id: FYPO:0002542
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of threonine residues N-terminal to proline residues (i.e. in Thr-Pro sequences) occurs to a lower extent than normal during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein threonine phosphorylation at Thr-Pro site during cellular response to hydrogen peroxide (obsolete FYPO:0002542)","synonyms":[{"name":"decreased protein threonine phosphorylation at TP site during cellular response to hydrogen peroxide","type":"exact"},{"name":"decreased protein threonine phosphorylation at Thr-Pro site during cellular response to H2O2","type":"exact"},{"name":"decreased protein threonine phosphorylation at Thr-Pro site during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"decreased protein threonine phosphorylation at Thr-Pro site during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"decreased protein threonine phosphorylation at threonine-proline site during cellular response to hydrogen peroxide","type":"exact"},{"name":"reduced protein threonine phosphorylation at Thr-Pro site during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0002542"}


id: MONDO:0024332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Allergic rhinitis caused by indoor allergens and lasting year round.","definition_xrefs":["NCIT:C92189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic rhinitis","termid":"MONDO:0011786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"perennial allergic rhinitis","secondary_identifiers":["UMLS:C0035457","icd11.foundation:1273917262","MEDGEN:19783","MESH:D012221","SCTID:446096008","EFO:1001417"],"synonyms":[{"name":"non-seasonal allergic rhinitis","type":"exact"},{"name":"nonseasonal allergic rhinitis","type":"exact"},{"name":"perennial allergic rhinitis","type":"exact"}],"termid":"MONDO:0024332","xrefs":{"Monarch":{"xref_id":"0024332"}}}


id: FYPO:0001044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of acid phosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal acid phosphatase activity","termid":"FYPO:0001044"}


id: PBO:0052081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1 pseudogene 6","termid":"PBO:0052081"}


id: PBO:0029607
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_curved_vegetative_cell","termid":"PBO:0029607"}


id: PBO:0078388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-3","termid":"PBO:0078388"}


id: PBO:0067085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 121, pseudogene","termid":"PBO:0067085"}


id: PBO:0057078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 181a-1","termid":"PBO:0057078"}


id: PBO:0074571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 27","termid":"PBO:0074571"}


id: FYPO:0003247
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of histone H3 binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone binding","termid":"FYPO:0007157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000702","FYPO:0000707"],"is_obsolete":false,"name":"abolished histone H3 binding","synonyms":[{"name":"abolished protein-histone H3 interaction","type":"exact"},{"name":"histone H3 binding abolished","type":"exact"}],"termid":"FYPO:0003247"}


id: PBO:0001019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human RNF family homolog","termid":"PBO:0001019"}


id: PBO:0036039
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein-protein_interaction","termid":"PBO:0036039"}


id: GO:0048891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a lateral line ganglion neuron.","definition_xrefs":["PMID:15018940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nervous system neuron differentiation","termid":"GO:0048934"},{"relation_name":"part_of","term_name":"lateral line ganglion development","termid":"GO:0048890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line ganglion neuron differentiation","synonyms":[{"name":"gLL neuron differentiation","type":"exact"}],"termid":"GO:0048891"}


id: MONDO:0000382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the respiratory system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"respiratory system benign neoplasm","secondary_identifiers":["UMLS:C0497556","SCTID:255166003","DOID:0050621","MEDGEN:635669","NCIT:C8531"],"synonyms":[{"name":"respiratory system benign neoplasm","type":"exact"}],"termid":"MONDO:0000382","xrefs":{"Monarch":{"xref_id":"0000382"}}}


id: GO:0052495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism reduces the flow of fluid within its second organism's vascular system, the vessels and tissue that carry or circulate fluids, such as blood, lymph or sap, through the body of an animal or plant, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete occlusion by organism of vascular system in other organism involved in symbiotic interaction (obsolete GO:0052495)","synonyms":[{"name":"occlusion by organism of vascular system in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052495"}


id: GO:0019095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which mitochondrial ribosomal RNA is transported to, or maintained in, the oocyte pole plasm. An example of this is found in Drosophila melanogaster.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pole plasm RNA localization","termid":"GO:0007316"},{"relation_name":"is_a","term_name":"mitochondrial RNA localization","termid":"GO:0019093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"pole plasm mitochondrial rRNA localization","secondary_identifiers":["GO:0048117"],"synonyms":[{"name":"establishment and maintenance of mitochondrial rRNA localization in pole plasm","type":"exact"},{"name":"oocyte pole plasm mitochondrial rRNA localization","type":"exact"},{"name":"pole plasm mitochondrial rRNA localisation","type":"exact"}],"termid":"GO:0019095"}


id: PBO:0051063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 4-4","termid":"PBO:0051063"}


id: PBO:0052156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 5","termid":"PBO:0052156"}


id: MONDO:0020025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare male infertility.","gene_count":0,"genotype_count":0,"name":"obsolete rare male infertility (obsolete MONDO:0020025)","secondary_identifiers":["Orphanet:98048"],"synonyms":[{"name":"rare male infertility","type":"exact"}],"termid":"MONDO:0020025","xrefs":{"Monarch":{"xref_id":"0020025"}}}


id: GO:0035449
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a plastid thylakoid membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of thylakoid membrane","termid":"GO:0035448"},{"relation_name":"is_a","term_name":"extrinsic component of plastid membrane","termid":"GO:0035452"},{"relation_name":"part_of","term_name":"plastid thylakoid membrane","termid":"GO:0055035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"extrinsic component of plastid thylakoid membrane","synonyms":[{"name":"extrinsic to plastid thylakoid membrane","type":"narrow"},{"name":"peripheral to plastid thylakoid membrane","type":"exact"}],"termid":"GO:0035449"}


id: MONDO:0014718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the SLC12A5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant migrating partial seizures of infancy","termid":"MONDO:0017385"},{"relation_name":"is_a","term_name":"neonatal-onset developmental and epileptic encephalopathy","termid":"MONDO:0100455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 34","secondary_identifiers":["DOID:0080460","UMLS:C4225257","GARD:16147","MEDGEN:899149","OMIM:616645"],"synonyms":[{"name":"DEE34","type":"exact"},{"name":"EIEE34","type":"exact"},{"name":"SLC12A5 early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 34","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in SLC12A5","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 34","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 34; EIEE34","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 34","type":"exact"}],"termid":"MONDO:0014718","xrefs":{"Monarch":{"xref_id":"0014718"}}}


id: PBO:0113298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein implicated in transcription termination by RNA polymerase II; binds to the RNA polymerase II C-terminal domain (CTD) phosphorylated on serine (ser2); interacts with 5' to 3' exonuclease Rat1p and decapping endonuclease Rai1p and is involved in mRNA 3' end processing; contains an RPR domain (CTD-interacting domain); involved in regulation of Ty1 transposition","termid":"PBO:0113298"}


id: PBO:0054809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2222","termid":"PBO:0054809"}


id: PBO:0063117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase family member 3","termid":"PBO:0063117"}


id: MONDO:0015499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete paralytic facial malformation (obsolete MONDO:0015499)","secondary_identifiers":["Orphanet:156224"],"termid":"MONDO:0015499","xrefs":{"Monarch":{"xref_id":"0015499"}}}


id: PBO:0085967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overproduction suppresses lethality due to expression of the dominant PET9 allele AAC2-A128P; may have a role in telomere maintenance; target of UME6 regulation","termid":"PBO:0085967"}


id: GO:0106069
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SUMO-E3 ligase complex capable of promoting synapsis, the meiotic cell cycle process where side by side pairing and physical juxtaposition of homologous chromosomes is created during meiotic prophase.","definition_xrefs":["PMID:16847351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO ligase complex","termid":"GO:0106068"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"condensed nuclear chromosome","termid":"GO:0000794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"synapsis initiation complex","termid":"GO:0106069"}


id: PBO:0066519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ral guanine nucleotide dissociation stimulator like 4","termid":"PBO:0066519"}


id: SO:1000100
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":".","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000100 mutation_causing_polypeptide_N_terminal_elongation (obsolete SO:1000100)","synonyms":[{"name":"mutation causing polypeptide N terminal elongation","type":"exact"},{"name":"polypeptide N-terminal elongation","type":"exact"}],"termid":"SO:1000100"}


id: MOD:01876
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a 4x(12)C labeled succinyl group.","definition_xrefs":["PubMed:12716131","PubMed:12175151","PubMed:11857757","Unimod:64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino succinylated residue","termid":"MOD:00457"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4x(1)H,4x(12)C-labeled alpha-amino succinylated residue","synonyms":[{"name":"Succinic anhydride labeling reagent, light form (+4amu, 4H2) site N-term","type":"related"},{"name":"Succinyl","type":"related"}],"termid":"MOD:01876"}


id: PBO:0066026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN binding protein 9","termid":"PBO:0066026"}


id: MONDO:0011109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple epiphyseal dysplasia, Lowry type is a rare primary bone dysplasia characterized by small, flat epiphyses (esp. the capital femoral epiphyses), rhizomelic shortening of limbs, cleft of secondary palate, micrognathia, mild joint contractures and facial dysmorphism (incl. mildly upward-slanting palpebral fissures, hypertelorism, broad nasal tip). Additionally reported features include scoliosis, genu valgum, mild pectus excavatum, platyspondyly, dislocated radial heads, brachydactyly, hypoplastic fibulae and talipes equinovarus.","definition_xrefs":["Orphanet:166016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple epiphyseal dysplasia","termid":"MONDO:0016648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"multiple epiphyseal dysplasia, Lowry type","secondary_identifiers":["MEDGEN:321890","MESH:C563291","OMIM:601560","GARD:17013","UMLS:C1832112","SCTID:768935003"],"synonyms":[{"name":"epiphyseal dysplasia, multiple, with Robin phenotype","type":"related"},{"name":"multiple epiphyseal dysplasia with ROBIN phenotype","type":"related"},{"name":"multiple epiphyseal dysplasia with Robin phenotype","type":"exact"}],"termid":"MONDO:0011109","xrefs":{"Monarch":{"xref_id":"0011109"}}}


id: PBO:0089379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-[acyl-carrier protein] reductase","termid":"PBO:0089379"}


id: PBO:0075475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily A member 1","termid":"PBO:0075475"}


id: GO:0047845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: deoxylimonoate + H2O = deoxylimononate D-ring-lactone + H+.","definition_xrefs":["RHEA:14997","EC:3.1.1.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"deoxylimonate A-ring-lactonase activity","secondary_identifiers":["KEGG_REACTION:R03803","MetaCyc:DEOXYLIMONATE-A-RING-LACTONASE-RXN"],"synonyms":[{"name":"deoxylimonate A-ring-lactonohydrolase activity","type":"related"}],"termid":"GO:0047845"}


id: PBO:0038411
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-term_tracker_item","termid":"PBO:0038411"}


id: PBO:0052934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 21-2","termid":"PBO:0052934"}


id: PBO:0057306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 516a-1","termid":"PBO:0057306"}


id: _global:seeAlso
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seeAlso","secondary_identifiers":["http://www.w3.org/2000/01/rdf-schema#seeAlso"],"termid":"_global:seeAlso","xrefs":{"Monarch":{"xref_id":"seeAlso"}}}


id: PomGeneEx:0000011
data:
  {"annotated_genes":["SJAG_00118","SJAG_01143"],"annotation_feature_type":"gene","cv_annotations":{"qualitative_gene_expression":[{"annotations":[121422,121441],"is_not":false,"summary":null,"term":"PomGeneEx:0000011"}]},"cv_name":"PomGeneExRNA","definition":"A gene expression qualifier that indicates that an RNA is present at a higher level under one set of conditions or at one indicated time than otherwise.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased","termid":"PomGeneEx:0000002"},{"relation_name":"is_a","term_name":"RNA expression level","termid":"PomGeneEx:0000009"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_01143":null},"genotype_count":0,"is_obsolete":false,"name":"RNA level increased","references_by_uniquename":{"PMID:25866389":null},"synonyms":[{"name":"RNA expression increased","type":"exact"},{"name":"increased RNA level","type":"exact"}],"termid":"PomGeneEx:0000011","terms_by_termid":{"GO:0000087":null,"PomGeneEx:0000011":null}}


id: GO:0006854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP/ADP exchange (obsolete GO:0006854)","synonyms":[{"name":"ATP/ADP exchange","type":"exact"}],"termid":"GO:0006854"}


id: MONDO:0003166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pilocytic astrocytoma (obsolete MONDO:0003166)","termid":"MONDO:0003166","xrefs":{"Monarch":{"xref_id":"0003166"}}}


id: FYPO:0000123
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which vacuoles are larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar morphology during vegetative growth","termid":"FYPO:0000368"},{"relation_name":"is_a","term_name":"large vacuoles","termid":"FYPO:0007821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"large vacuoles during vegetative growth","synonyms":[{"name":"enlarged vacuoles during vegetative growth","type":"exact"},{"name":"large vacuoles during mitotic cell cycle","type":"related"},{"name":"vacuole organization defects, large vacuoles","type":"exact"}],"termid":"FYPO:0000123"}


id: PBO:0075715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRGAP3 antisense RNA 4","termid":"PBO:0075715"}


id: PBO:0073346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 8","termid":"PBO:0073346"}


id: MONDO:0006257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low grade neuroendocrine tumor (carcinoid tumor) that arises from the jejunum. The mitotic count is less than 2 per 10 HPF and/or the Ki67 index is equal to or less than 2 percent.","definition_xrefs":["NCIT:C6429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestinal neuroendocrine tumor G1","termid":"MONDO:0000540"},{"relation_name":"is_a","term_name":"colon neuroendocrine tumor G1","termid":"MONDO:0006155"},{"relation_name":"is_a","term_name":"jejunal neuroendocrine tumor, well differentiated, low or intermediate grade","termid":"MONDO:0015064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"jejunal neuroendocrine tumor G1","secondary_identifiers":["EFO:1000308","UMLS:C1334296","MEDGEN:235235"],"synonyms":[{"name":"carcinoid tumor of jejunum","type":"exact"},{"name":"carcinoid tumor of the jejunum","type":"exact"},{"name":"carcinoid tumour of jejunum","type":"exact"},{"name":"carcinoid tumour of the jejunum","type":"exact"},{"name":"grade 1 neuroendocrine neoplasm of jejunum","type":"exact"},{"name":"jejunal NET G1","type":"exact"},{"name":"jejunal carcinoid tumor","type":"exact"},{"name":"jejunal carcinoid tumour","type":"exact"},{"name":"jejunum NET G1","type":"exact"},{"name":"jejunum carcinoid tumor","type":"exact"},{"name":"jejunum carcinoid tumor (disease)","type":"exact"},{"name":"jejunum carcinoid tumour","type":"exact"},{"name":"jejunum carcinoid tumour (disease)","type":"exact"},{"name":"jejunum neuroendocrine neoplasm G1","type":"exact"},{"name":"jejunum neuroendocrine tumor, well differentiated, low grade","type":"exact"}],"termid":"MONDO:0006257","xrefs":{"Monarch":{"xref_id":"0006257"}}}


id: PBO:0050909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein with tetratricopeptide repeats 1B","termid":"PBO:0050909"}


id: GO:0045121
data:
  {"annotated_genes":["SJAG_04620","SJAG_04714","SJAG_03536","SJAG_04001"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105187,120559,90306,91203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044853"}]},"cv_name":"cellular_component","definition":"Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions.","definition_xrefs":["PMID:16645198","PMID:20044567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane microdomain","termid":"GO:0098857"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03536":null,"SJAG_04001":null,"SJAG_04620":null,"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"membrane raft","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Lipid_raft"],"synonyms":[{"name":"GEM domain","type":"related"},{"name":"glycolipid-enriched membrane domain","type":"related"},{"name":"lipid raft","type":"exact"}],"termid":"GO:0045121","terms_by_termid":{"GO:0044853":null}}


id: PBO:0113307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in homologous recombination; attenuates resection of DNA double-strand break ends and stimulates strand exchange by facilitating Rad51p binding to single-stranded DNA (ssDNA); anneals complementary ssDNA; involved in the repair of double-strand breaks in DNA during vegetative growth, meiosis and UV induced sister chromatid recombination; forms a homodecameric ring; phosphorylation by Cdc28p in G2/M phase promotes Rad52p ring interaction that leads to superstructure formation","termid":"PBO:0113307"}


id: GO:0019668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of amino acids; in these reactions, one amino acid is oxidised (acts as an electron donor) and a different amino acid is reduced (acts as an electron acceptor); oxidation of the electron-donating amino acid yields energy in the form of ATP.","definition_xrefs":["PMID:13140081","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic amino acid catabolic process","termid":"GO:0019665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"anaerobic catabolism of pairs of amino acids","synonyms":[{"name":"Stickland reaction","type":"narrow"},{"name":"cofermentation of pairs of amino acids","type":"exact"}],"termid":"GO:0019668"}


id: GO:0047505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-menthol + H+ + NADPH + O2 = 1,4-menthane-3,8-diol + H2O + NADP+.","definition_xrefs":["RHEA:11648","EC:1.14.13.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(-)-menthol monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R02178","MetaCyc:--MENTHOL-MONOOXYGENASE-RXN"],"synonyms":[{"name":"(-)-menthol,NADPH:oxygen oxidoreductase (8-hydroxylating)","type":"related"},{"name":"l-menthol monooxygenase activity","type":"related"}],"termid":"GO:0047505"}


id: PBO:0069569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 841, pseudogene","termid":"PBO:0069569"}


id: FYPO:0003732
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain any detectable respiratory chain complex IV in the mitochondria.","definition_xrefs":["PomBase:mah","PMID:16911509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype","termid":"FYPO:0000136"},{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"mitochondrial respiratory chain complex IV absent from cell","synonyms":[{"name":"absent mitochondrial respiratory chain complex IV","type":"exact"},{"name":"mitochondrial respiratory chain complex IV absent from cell during mitotic cell cycle","type":"related"},{"name":"mitochondrial respiratory chain complex IV absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0003732"}


id: GO:1990797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The controlled release of cholecystokinin from a cell. Cholecystokinin is a peptide hormone that participates in pancreatic enzyme release in the gut and is also found in the brain.","definition_xrefs":["PMID:2755938"],"gene_count":0,"genotype_count":0,"name":"obsolete cholecystokinin secretion (obsolete GO:1990797)","synonyms":[{"name":"CCK secretion","type":"exact"}],"termid":"GO:1990797"}


id: MOD:00808
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O3-galactosylserine.","definition_xrefs":["RESID:AA0400","PubMed:666730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"},{"relation_name":"is_a","term_name":"galactosylated residue","termid":"MOD:00476"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-galactosyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(alpha-D-galactopyranosyloxy)propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (Gal) serine","type":"exact"},{"name":"CARBOHYD O-linked (Hex)","type":"exact"},{"name":"O-galactosyl-L-serine","type":"exact"},{"name":"O-glycosylserine","type":"exact"},{"name":"O3-galactosylserine","type":"exact"},{"name":"OGalSer","type":"exact"}],"termid":"MOD:00808"}


id: MONDO:1011834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar abiotrophy, non-human animal","secondary_identifiers":["OMIA:000175"],"termid":"MONDO:1011834","xrefs":{"Monarch":{"xref_id":"1011834"}}}


id: GO:0021783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a preganglionic parasympathetic fiber over time, from its formation to the mature structure. A preganglionic parasympathetic fiber is a cholinergic axonal fiber projecting from the CNS to a parasympathetic ganglion.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cjm","GOC:jid","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"},{"relation_name":"part_of","term_name":"parasympathetic nervous system development","termid":"GO:0048486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"preganglionic parasympathetic fiber development","termid":"GO:0021783"}


id: FYPO:0002566
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000458"},{"relation_name":"is_a","term_name":"abolished histone methylation during vegetative growth","termid":"FYPO:0002565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished histone H3-K9 methylation during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 methylation during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 methylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K9me during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 methylation during vegetative growth","type":"exact"},{"name":"histone H3-K9 methylation abolished during vegetative growth","type":"exact"},{"name":"histone H3-K9 methylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0002566"}


id: PBO:0079346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 30, pseudogene","termid":"PBO:0079346"}


id: SO:0000587
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Group I catalytic introns are large self-splicing ribozymes. They catalyze their own excision from mRNA, tRNA and rRNA precursors in a wide range of organisms. The core secondary structure consists of 9 paired regions (P1-P9). These fold to essentially two domains, the P4-P6 domain (formed from the stacking of P5, P4, P6 and P6a helices) and the P3-P9 domain (formed from the P8, P3, P7 and P9 helices). Group I catalytic introns often have long ORFs inserted in loop regions.","direct_ancestors":[{"relation_name":"is_a","term_name":"autocatalytically_spliced_intron","termid":"SO:0000588"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"group_I_intron","secondary_identifiers":["http://en.wikipedia.org/wiki/Group_I_intron"],"synonyms":[{"name":"group I intron","type":"exact"}],"termid":"SO:0000587"}


id: PBO:0028055
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_silencing_at_subtelomere","termid":"PBO:0028055"}


id: PBO:0045543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrouridine synthase 3 like","termid":"PBO:0045543"}


id: GO:0018760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 2 H+ + thiocyanate = carbonyl sulfide + NH4.","definition_xrefs":["EC:3.5.5.8","RHEA:21464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles","termid":"GO:0016815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"thiocyanate hydrolase activity","secondary_identifiers":["UM-BBD_reactionID:r0598","KEGG_REACTION:R05780","MetaCyc:RXN-1761"],"synonyms":[{"name":"thiocyanate aminohydrolase activity","type":"related"}],"termid":"GO:0018760"}


id: GO:0045309
data:
  {"annotated_genes":["SJAG_04933","SJAG_03118"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74286,79977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"}]},"cv_name":"molecular_function","definition":"Binding to a phosphorylated amino acid residue within a protein.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein binding","termid":"GO:0051219"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03118":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"protein phosphorylated amino acid binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"phosphoprotein amino acid binding","type":"related"}],"termid":"GO:0045309","terms_by_termid":{"GO:1990269":null}}


id: PBO:0109122
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycoside Hydrolase family Sixteen","termid":"PBO:0109122"}


id: GO:0042012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-16 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-16 receptor activity","synonyms":[{"name":"IL-16 receptor activity","type":"exact"},{"name":"IL-16R","type":"exact"}],"termid":"GO:0042012"}


id: MONDO:0024279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-granulomatous or granulomatous chronic inflammation of the endometrium. Causes include sexually transmitted pathogens and gynecological procedures. Patients may present with irregular bleeding.","definition_xrefs":["NCIT:C102820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometritis","termid":"MONDO:0000918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic endometritis","secondary_identifiers":["SCTID:63922003","UMLS:C0238104","MEDGEN:536766","icd11.foundation:440849195"],"synonyms":[{"name":"chronic endometritis","type":"exact"},{"name":"endometritis, chronic","type":"exact"}],"termid":"MONDO:0024279","xrefs":{"Monarch":{"xref_id":"0024279"}}}


id: MONDO:1010469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Patent ductus arteriosus that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"patent ductus arteriosus, non-human animal","termid":"MONDO:1010017"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patent ductus arteriosus, sheep","secondary_identifiers":["OMIA:000779-9940"],"termid":"MONDO:1010469","xrefs":{"Monarch":{"xref_id":"1010469"}}}


id: MONDO:0012965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign familial infantile epilepsy","termid":"MONDO:0017615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"seizures, benign familial infantile, 4","secondary_identifiers":["OMIM:612627","UMLS:C2675462","GARD:16505","DOID:0081117","MESH:C567231","MEDGEN:436440"],"synonyms":[{"name":"BFIS4","type":"exact"},{"name":"convulsions, benign familial infantile, 4","type":"related"},{"name":"seizures, benign familial infantile, 4","type":"exact"}],"termid":"MONDO:0012965","xrefs":{"Monarch":{"xref_id":"0012965"}}}


id: PBO:0090141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase MRP subunit, ribosomal protein L7-like Rpl701","termid":"PBO:0090141"}


id: FYPO:0007296
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the biosynthesis of UDP-galactose does not occur.","definition_xrefs":["GO:0052574","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished UDP-galactose biosynthetic process","synonyms":[{"name":"UDP-galactose biosynthetic process abolished","type":"exact"},{"name":"abolished UDP-D-galactopyranose biosynthesis","type":"exact"},{"name":"abolished UDP-D-galactose biosynthesis","type":"exact"},{"name":"abolished UDP-galactose biosynthesis","type":"exact"},{"name":"abolished UDP-galactose biosynthetic process during mitotic cell cycle","type":"related"},{"name":"abolished UDP-galactose biosynthetic process during vegetative growth","type":"exact"}],"termid":"FYPO:0007296"}


id: FYPO:0009016
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which a larger than normal proportion of cells is viable when grown with xylose as carbon source. In High Throughput Phenotyping this is typically assessed using phloxine as a dye.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population viability","termid":"FYPO:0009008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population viability on xylose carbon source","synonyms":[{"name":"increased cell population viability during vegetative growth on xylose carbon source","type":"exact"}],"termid":"FYPO:0009016"}


id: GO:0004819
data:
  {"annotated_genes":["SJAG_04482"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81946],"is_not":false,"summary":null,"term":"GO:0004819"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-glutamine + tRNA(Gln) = AMP + diphosphate + L-glutaminyl-tRNA(Gln).","definition_xrefs":["EC:6.1.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04482":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0140098","GO:0003824","GO:0003674","GO:0140101"],"is_obsolete":false,"name":"glutamine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-380241","RHEA:20121","MetaCyc:GLUTAMINE--TRNA-LIGASE-RXN","Reactome:R-HSA-379982"],"synonyms":[{"name":"GlnRS","type":"related"},{"name":"L-glutamine:tRNAGln ligase (AMP-forming)","type":"related"},{"name":"glutamine translase activity","type":"related"},{"name":"glutamine-tRNA synthetase activity","type":"related"},{"name":"glutaminyl ribonucleic acid","type":"related"},{"name":"glutaminyl-tRNA synthetase activity","type":"exact"},{"name":"glutaminyl-transfer RNA synthetase activity","type":"related"},{"name":"glutaminyl-transfer ribonucleate synthetase activity","type":"related"}],"termid":"GO:0004819","terms_by_termid":{"GO:0004819":null}}


id: PBO:0088340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex/exosome interacting GTPase Ski7","termid":"PBO:0088340"}


id: GO:0022865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables electron flow across a biological membrane, from donors localized on one side of the membrane to acceptors localized on the other side. These systems contribute to or subtract from the membrane potential, depending on the direction of electron flow. They are therefore important to cellular energetics.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","TC:5"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane electron transfer carrier (obsolete GO:0022865)","termid":"GO:0022865"}


id: PBO:0027466
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_wall_thickness_at_new_end_during_vegetative_growth","termid":"PBO:0027466"}


id: PR:Q09848
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- usp108 gene.","definition_xrefs":["UniProtKB:Q09848","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein usp108 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.08","synonyms":[{"name":"Spom972h-usp108","type":"exact"}],"termid":"PR:Q09848"}


id: MONDO:0002281
data:
  {"annotated_genes":["SJAG_00694","SJAG_03447","SJAG_03424","SJAG_01548","SJAG_03164"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009238"},{"annotations":[87544,87545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007925"},{"annotations":[87063,87064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009797"}]},"cv_name":"mondo","definition":"Anemia that is characterized by increased red blood cell volume.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00694":null,"SJAG_01548":null,"SJAG_03164":null,"SJAG_03424":null,"SJAG_03447":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"macrocytic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0001972","UMLS:C0002886","MEDGEN:1920","NCIT:C34381","DOID:2361","SCTID:83414005","MESH:D000748"],"synonyms":[{"name":"D22S676","type":"exact"},{"name":"D22S750","type":"exact"},{"name":"anaemia macrocytic","type":"exact"},{"name":"anemia macrocytic","type":"exact"},{"name":"macrocytic Anaemia","type":"exact"},{"name":"macrocytic Anemia","type":"exact"},{"name":"macrocytic anaemia (disease)","type":"exact"},{"name":"macrocytic anaemia of unspecified cause","type":"exact"},{"name":"macrocytic anemia","type":"exact"},{"name":"macrocytic anemia (disease)","type":"exact"},{"name":"macrocytic anemia of unspecified cause","type":"exact"}],"termid":"MONDO:0002281","terms_by_termid":{"MONDO:0007925":null,"MONDO:0009238":null,"MONDO:0009797":null},"xrefs":{"Monarch":{"xref_id":"0002281"}}}


id: PBO:0087578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the alpha-1,6 mannosyltransferase complex; type II membrane protein; has a role in retention of glycosyltransferases in the Golgi; involved in osmotic sensitivity and resistance to aminonitrophenyl propanediol","termid":"PBO:0087578"}


id: MONDO:0003064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign papillary neoplasm composed of transitional cells and characterized by an endophytic growth pattern.","definition_xrefs":["NCIT:C4118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inverted papilloma","termid":"MONDO:0002537"},{"relation_name":"is_a","term_name":"transitional cell papilloma","termid":"MONDO:0005605"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted transitional cell papilloma","secondary_identifiers":["DOID:4630","ICDO:8121/1","MEDGEN:1790412","UMLS:C5551359"],"synonyms":[{"name":"inverted transitional cell papilloma","type":"exact"},{"name":"inverted transitional papilloma","type":"exact"},{"name":"transitional papilloma, inverted","type":"exact"}],"termid":"MONDO:0003064","xrefs":{"Monarch":{"xref_id":"0003064"}}}


id: GO:0042479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eye photoreceptor development.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of eye photoreceptor cell development","termid":"GO:0042478"},{"relation_name":"is_a","term_name":"positive regulation of photoreceptor cell differentiation","termid":"GO:0046534"},{"relation_name":"positively_regulates","term_name":"eye photoreceptor cell development","termid":"GO:0042462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of eye photoreceptor cell development","synonyms":[{"name":"activation of eye photoreceptor cell development","type":"narrow"},{"name":"positive regulation of eye photoreceptor development","type":"exact"},{"name":"stimulation of eye photoreceptor cell development","type":"narrow"},{"name":"up regulation of eye photoreceptor cell development","type":"exact"},{"name":"up-regulation of eye photoreceptor cell development","type":"exact"},{"name":"upregulation of eye photoreceptor cell development","type":"exact"}],"termid":"GO:0042479"}


id: PBO:0080008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP12 pseudogene 3","termid":"PBO:0080008"}


id: GO:0072710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydroxyurea stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hydroxyurea","synonyms":[{"name":"response to HU","type":"exact"}],"termid":"GO:0072710"}


id: MONDO:0017685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin B12-responsive methylmalonic acidemia","termid":"MONDO:0017214"},{"relation_name":"is_a","term_name":"methylmalonic aciduria and/or homocystinuria, cblD type","termid":"MONDO:0100463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"vitamin B12-responsive methylmalonic acidemia, type cblDv2","secondary_identifiers":["GARD:17391","MEDGEN:376388","Orphanet:308442","UMLS:C1848554"],"synonyms":[{"name":"vitamin B12-responsive methylmalonic aciduria, type cblDv2","type":"exact"}],"termid":"MONDO:0017685","xrefs":{"Monarch":{"xref_id":"0017685"}}}


id: PBO:0042438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 binding protein kinase alpha","termid":"PBO:0042438"}


id: PATO:0001074
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001074 absolute impulse (obsolete PATO:0001074)","termid":"PATO:0001074"}


id: PBO:0001181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L1 (predicted)","termid":"PBO:0001181"}


id: PR:O74330
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S27-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02489","PRO:DNx","PANTHER:PTHR11594:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.10","secondary_identifiers":["UniProtKB:O74330"],"synonyms":[{"name":"Spom972h-RPS27L","type":"exact"}],"termid":"PR:O74330"}


id: PBO:0080980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 14","termid":"PBO:0080980"}


id: PR:Q09176
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- uaf2 gene.","definition_xrefs":["UniProtKB:Q09176","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor U2AF 23 kDa subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.06","synonyms":[{"name":"Spom972h-uaf2","type":"exact"},{"name":"U2 auxiliary factor 23 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U2 snRNP auxiliary factor small subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U2AF23 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09176"}


id: PBO:0049697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronan and proteoglycan link protein 3","termid":"PBO:0049697"}


id: PBO:0059598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 10","termid":"PBO:0059598"}


id: GO:0140398
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: versicolorin B + NADPH + O2 = versicolorin A + NADP+ + 2 H2O. Uses heme-thiolate as a co-factor. Involved in the synthesis of aflatoxins in the fungus Aspergillus parasiticus.","definition_xrefs":["PMID:15006741","PMID:8368837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"versicolorin B desaturase activity","secondary_identifiers":["RHEA:35743","MetaCyc:RXN-9495","EC:1.14.19.n5","KEGG_REACTION:R10479"],"termid":"GO:0140398"}


id: PBO:0054804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2217","termid":"PBO:0054804"}


id: MONDO:0002312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mycosis that arises from infection in an immunologically compromised host.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"systemic mycosis","termid":"MONDO:0000256"},{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opportunistic mycosis","secondary_identifiers":["UMLS:C0029119","SCTID:78999002","ICD9:118","MEDGEN:508004","DOID:2473","ICD9:117.9"],"synonyms":[{"name":"opportunistic mycoses","type":"exact"},{"name":"opportunistic systemic mycoses","type":"narrow"}],"termid":"MONDO:0002312","xrefs":{"Monarch":{"xref_id":"0002312"}}}


id: PBO:0081823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 746","termid":"PBO:0081823"}


id: PBO:0071139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 2","termid":"PBO:0071139"}


id: FYPO:0003409
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the formation of chromatin containing the histone H3 variant CenH3 (also called CENP-A; Cnp1 in S. pombe) is abnormal. CENP-A-containing nucleosomes are normally assembled into chromatin at the centromeres, encompassing the central core and centromeric inner repeat regions.","definition_xrefs":["GO:0034080","PomBase:vw","PomBase:mah","PMID:24710126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"},{"relation_name":"is_a","term_name":"abnormal CENP-A containing chromatin organization","termid":"FYPO:0004308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000641","FYPO:0001320"],"is_obsolete":false,"name":"abnormal CENP-A containing chromatin assembly","synonyms":[{"name":"abnormal CENP-A containing nucleosome assembly","type":"related"},{"name":"abnormal CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"abnormal CENP-A containing nucleosome assembly during mitotic cell cycle","type":"related"},{"name":"abnormal CENP-A containing nucleosome assembly during vegetative growth","type":"exact"},{"name":"abnormal CENP-A deposition","type":"related"},{"name":"abnormal CENP-A loading","type":"related"},{"name":"abnormal CenH3-containing nucleosome assembly","type":"related"},{"name":"abnormal DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"abnormal centromere-specific histone exchange","type":"exact"},{"name":"abnormal centromere-specific nucleosome assembly","type":"exact"},{"name":"abnormal centromeric DNA replication-independent nucleosome assembly","type":"exact"}],"termid":"FYPO:0003409"}


id: FYPO:0004962
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at replication origins is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:12419251","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000138","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to chromatin at replication origin","synonyms":[{"name":"normal protein localisation to chromatin at replication origin","type":"exact"},{"name":"normal protein localization to chromatin at replication origin during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at replication origin during vegetative growth","type":"exact"}],"termid":"FYPO:0004962"}


id: GO:0097737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A maturation process by which an organism acquires the ability to reproduce. In fungi, reproductive competence only occurs in a population of filamentous cells that form a mycelium.","definition_xrefs":["PMID:23864594","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acquisition of mycelium reproductive competence","synonyms":[{"name":"mycelium developmental competence","type":"related"}],"termid":"GO:0097737"}


id: PBO:0079034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 3-1","termid":"PBO:0079034"}


id: GO:0097036
data:
  {"annotated_genes":["SJAG_00261","SJAG_00870"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73704,103129],"is_not":false,"summary":null,"term":"GO:0097036"}]},"cv_name":"biological_process","definition":"Any process that modulates the proportions or spatial arrangement of sterols in the plasma membrane.","definition_xrefs":["PMID:20823909","PMID:18441123","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"is_a","term_name":"regulation of membrane lipid distribution","termid":"GO:0097035"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00261":null,"SJAG_00870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of plasma membrane sterol distribution","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0097036","terms_by_termid":{"GO:0097036":null}}


id: PBO:0034684
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_Ssb1_focus_presence_during_cellular_response_to_ionizing_radiation","termid":"PBO:0034684"}


id: PBO:0061668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 50 pseudogene 1","termid":"PBO:0061668"}


id: GO:0007365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that divides the spatial regions of an embryo into serially repeated regions.","definition_xrefs":["GOC:dph","GOC:isa_complete","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"blastoderm segmentation","termid":"GO:0007350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"periodic partitioning","termid":"GO:0007365"}


id: GO:2000020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of male gonad development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gonad development","termid":"GO:1905941"},{"relation_name":"is_a","term_name":"regulation of male gonad development","termid":"GO:2000018"},{"relation_name":"positively_regulates","term_name":"male gonad development","termid":"GO:0008584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of male gonad development","synonyms":[{"name":"positive regulation of testicular development","type":"exact"},{"name":"positive regulation of testis development","type":"exact"}],"termid":"GO:2000020"}


id: PBO:0045304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin binding protein","termid":"PBO:0045304"}


id: GO:1904393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle acetylcholine-gated channel clustering.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:7722643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor clustering","termid":"GO:1903909"},{"relation_name":"regulates","term_name":"skeletal muscle acetylcholine-gated channel clustering","termid":"GO:0071340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle acetylcholine-gated channel clustering","synonyms":[{"name":"regulation of skeletal muscle AChR clustering","type":"exact"},{"name":"regulation of skeletal muscle nicotinic acetylcholine receptor clustering","type":"exact"}],"termid":"GO:1904393"}


id: PR:P33886
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin light chain kinase 2, skeletal/cardiac muscle that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase wis1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.07c","secondary_identifiers":["UniProtKB:P33886"],"synonyms":[{"name":"SPBC409.07c","type":"related"},{"name":"Spom972h-MYLK2","type":"exact"},{"name":"protein kinase sty2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"spc2","type":"related"},{"name":"sty2","type":"related"}],"termid":"PR:P33886"}


id: GO:0002178
data:
  {"annotated_genes":["SJAG_01857","SJAG_02305","SJAG_02706","SJAG_04451","SJAG_01349","SJAG_00880","SJAG_04178","SJAG_04550"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112122,76634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031211"},{"annotations":[98812,107942,80697,95433,74854,107485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017059"}]},"cv_name":"cellular_component","definition":"A protein complex with palmitoyltransferase activity.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_01349":null,"SJAG_01857":null,"SJAG_02305":null,"SJAG_02706":null,"SJAG_04178":null,"SJAG_04451":null,"SJAG_04550":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"palmitoyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0002178","terms_by_termid":{"GO:0017059":null,"GO:0031211":null}}


id: GO:0047682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aromatic primary alcohol + O2 = an aromatic aldehyde + H2O2.","definition_xrefs":["EC:1.1.3.7","MetaCyc:ARYL-ALCOHOL-OXIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"aryl-alcohol oxidase activity","secondary_identifiers":["RHEA:17541"],"synonyms":[{"name":"arom. alcohol oxidase activity","type":"related"},{"name":"aryl alcohol oxidase activity","type":"related"},{"name":"aryl-alcohol:oxygen oxidoreductase activity","type":"related"},{"name":"veratryl alcohol oxidase activity","type":"narrow"}],"termid":"GO:0047682"}


id: PBO:0083045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deoxyhypusine hydroxylase; HEAT-repeat containing metalloenzyme that catalyzes hypusine formation; binds to and is required for the modification of Hyp2p (eIF5A); complements S. pombe mmd1 mutants defective in mitochondrial positioning; protein abundance increases in response to DNA replication stress","termid":"PBO:0083045"}


id: _global:causally_influenced_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_entities","termid":"_global:causal_relation_between_entities"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_influenced_by","secondary_identifiers":["RO:0002559"],"termid":"_global:causally_influenced_by"}


id: GO:0033630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of cell adhesion mediated by integrin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion mediated by integrin","termid":"GO:0033628"},{"relation_name":"is_a","term_name":"positive regulation of cell adhesion","termid":"GO:0045785"},{"relation_name":"positively_regulates","term_name":"cell adhesion mediated by integrin","termid":"GO:0033627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of cell adhesion mediated by integrin","synonyms":[{"name":"positive regulation of cell adhesion mediated by integrin complex","type":"exact"}],"termid":"GO:0033630"}


id: PBO:0058912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12130","termid":"PBO:0058912"}


id: GO:0106290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (E)-cinnamate + ATP + CoA = (E)-cinnamoyl-CoA + AMP + diphosphate.","definition_xrefs":["PMID:22649270","RHEA:64788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"trans-cinnamate-CoA ligase activity","termid":"GO:0106290"}


id: MONDO:0002107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear disorder","termid":"MONDO:0002467"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unilateral hyperactive labyrinth","secondary_identifiers":["UMLS:C0155515","DOID:1777","MEDGEN:510001","ICD9:386.51"],"synonyms":[{"name":"hyperactive labyrinth, unilateral","type":"exact"},{"name":"hyperactive unilateral labyrinthine dysfunction","type":"exact"}],"termid":"MONDO:0002107","xrefs":{"Monarch":{"xref_id":"0002107"}}}


id: PR:O74311
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-acetyltransferase MAK3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23091:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 30 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.06","secondary_identifiers":["UniProtKB:O74311"],"synonyms":[{"name":"N-terminal acetyltransferase C complex catalytic subunit mak3 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NatC catalytic subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC15D4.06","type":"related"},{"name":"Spom972h-NAA30","type":"exact"},{"name":"mak3","type":"related"}],"termid":"PR:O74311"}


id: PBO:0050976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon related developmental regulator 2","termid":"PBO:0050976"}


id: GO:0035214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the eye-antennal imaginal disc over time, from its initial formation through to its metamorphosis to form adult structures including the eye, antenna, head capsule and maxillary palps.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye-antennal disc development","termid":"GO:0035214"}


id: GO:0005847
data:
  {"annotated_genes":["SJAG_01412","SJAG_04587","SJAG_03624","SJAG_03126","SJAG_03500","SJAG_03233","SJAG_02720","SJAG_03728","SJAG_00961","SJAG_04022","SJAG_02865","SJAG_00527","SJAG_01175","SJAG_01599","SJAG_03226"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[69700,71746,71844,72112,72824,73067,74366,74871,78595,79326,81137,95321,113281,113939,120239],"is_not":false,"summary":null,"term":"GO:0005847"}]},"cv_name":"cellular_component","definition":"A multisubunit complex that binds to the canonical AAUAAA hexamer and to U-rich upstream sequence elements on the pre-mRNA, thereby stimulating the otherwise weakly active and nonspecific polymerase to elongate efficiently RNAs containing a poly(A) signal.","definition_xrefs":["PMID:14749727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA cleavage factor complex","termid":"GO:0005849"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00527":null,"SJAG_00961":null,"SJAG_01175":null,"SJAG_01412":null,"SJAG_01599":null,"SJAG_02720":null,"SJAG_02865":null,"SJAG_03126":null,"SJAG_03226":null,"SJAG_03233":null,"SJAG_03500":null,"SJAG_03624":null,"SJAG_03728":null,"SJAG_04022":null,"SJAG_04587":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"CFII complex","type":"related"},{"name":"CPF complex","type":"narrow"},{"name":"CPSF complex","type":"narrow"},{"name":"cleavage and polyadenylylation specificity factor activity","type":"related"}],"termid":"GO:0005847","terms_by_termid":{"GO:0005847":null}}


id: GO:0006546
data:
  {"annotated_genes":["SJAG_03861","SJAG_03641","SJAG_02901"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75938,79829,98315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycine, aminoethanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine metabolic process","termid":"GO:0006544"},{"relation_name":"is_a","term_name":"serine family amino acid catabolic process","termid":"GO:0009071"},{"relation_name":"is_a","term_name":"proteinogenic amino acid catabolic process","termid":"GO:0170040"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02901":null,"SJAG_03641":null,"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"glycine catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6783984"],"synonyms":[{"name":"glycine breakdown","type":"exact"},{"name":"glycine catabolism","type":"exact"},{"name":"glycine degradation","type":"exact"}],"termid":"GO:0006546","terms_by_termid":{"GO:0019464":null}}


id: GO:0046716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular homeostatic process that preserves a muscle cell in a stable functional or structural state.","definition_xrefs":["PMID:3091429","PMID:7781901","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular homeostasis","termid":"GO:0019725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle cell cellular homeostasis","synonyms":[{"name":"muscle fiber maintenance","type":"narrow"},{"name":"muscle homeostasis","type":"related"}],"termid":"GO:0046716"}


id: GO:0010766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sodium ion transport","termid":"GO:0002028"},{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transport","termid":"GO:0043271"},{"relation_name":"negatively_regulates","term_name":"sodium ion transport","termid":"GO:0006814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of sodium ion transport","termid":"GO:0010766"}


id: MONDO:0003536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fallopian tube serous adenocarcinoma (obsolete MONDO:0003536)","termid":"MONDO:0003536","xrefs":{"Monarch":{"xref_id":"0003536"}}}


id: PATO:0002066
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A solid configuration inhering in a material entity by virtue of its constituent atoms, molecules, or ions being arranged in an orderly repeating pattern extending in all three spatial dimensions.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Crystal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solid configuration","termid":"PATO:0001736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystal configuration","termid":"PATO:0002066"}


id: GO:0048754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of branches in an epithelial tube are generated and organized. A tube is a long hollow cylinder.","definition_xrefs":["GOC:jid","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"is_a","term_name":"morphogenesis of a branching epithelium","termid":"GO:0061138"},{"relation_name":"part_of","term_name":"epithelial tube morphogenesis","termid":"GO:0060562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching morphogenesis of an epithelial tube","synonyms":[{"name":"tubulogenesis","type":"related"}],"termid":"GO:0048754"}


id: PBO:0084651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minor isoform of pyruvate decarboxylase; decarboxylates pyruvate to acetaldehyde, involved in amino acid catabolism; transcription is glucose- and ethanol-dependent, and is strongly induced during sulfur limitation","termid":"PBO:0084651"}


id: GO:0075528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a virus effects a change in the host immune response.","definition_xrefs":["GOC:bf","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation by virus of host immune response (obsolete GO:0075528)","synonyms":[{"name":"regulation by virus of host immune system process","type":"exact"}],"termid":"GO:0075528"}


id: MONDO:0009161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of Ehlers-Danlos syndrome (EDS) characterized by extreme skin fragility and laxity, a prominent facial gestalt, excessive bruising and, sometimes, major complications due to visceral and vascular fragility.","definition_xrefs":["Orphanet:1901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, dermatosparaxis type","secondary_identifiers":["MESH:C567527","DOID:0080733","NANDO:1200651","UMLS:C2700425","GARD:2089","icd11.foundation:445808781","OMIM:225410","SCTID:55711009","MEDGEN:397792","NANDO:2201261"],"synonyms":[{"name":"EDS 7C","type":"related"},{"name":"EDS VIIC","type":"exact"},{"name":"EDS7C","type":"related"},{"name":"EDSDERMS","type":"related"},{"name":"Ehlers-Danlos syndrome type 7C","type":"exact"},{"name":"Ehlers-Danlos syndrome type 7C (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome, dermatosparaxis type","type":"exact"},{"name":"Ehlers-Danlos syndrome, type VII, autosomal recessive","type":"related"},{"name":"dEDS","type":"related"},{"name":"dermatosparaxis","type":"related"},{"name":"dermatosparaxis EDS","type":"related"},{"name":"dermatosparaxis Ehlers-Danlos syndrome","type":"related"}],"termid":"MONDO:0009161","xrefs":{"Monarch":{"xref_id":"0009161"}}}


id: PBO:0027837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cortical_microtubule_cytoskeleton","termid":"PBO:0027837"}


id: PBO:0011168
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galacose specific flocculation","termid":"PBO:0011168"}


id: PBO:0046423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor A7","termid":"PBO:0046423"}


id: MONDO:0006216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polypoid epithelial neoplasm that arises from the gallbladder. According to the neoplastic growth pattern, it is classified as tubular, tubulopapillary, or papillary.","definition_xrefs":["NCIT:C7720"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"biliary tract neoplasm","termid":"MONDO:0005304"},{"relation_name":"is_a","term_name":"digestive system adenoma","termid":"MONDO:0006180"},{"relation_name":"is_a","term_name":"gallbladder neoplasm","termid":"MONDO:0021253"},{"relation_name":"is_a","term_name":"polyp of gallbladder","termid":"MONDO:0021416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"gallbladder adenoma","secondary_identifiers":["MEDGEN:116046","EFO:1000263","DOID:0050893","UMLS:C0238137"],"synonyms":[{"name":"adenoma of gallbladder","type":"exact"},{"name":"adenoma of the gallbladder","type":"exact"},{"name":"gall bladder adenoma","type":"exact"},{"name":"gallbladder adenoma","type":"exact"}],"termid":"MONDO:0006216","xrefs":{"Monarch":{"xref_id":"0006216"}}}


id: MONDO:1011503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fanconi syndrome that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi syndrome, non-human animal","termid":"MONDO:1011448"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fanconi syndrome, dog","secondary_identifiers":["OMIA:000366-9615"],"termid":"MONDO:1011503","xrefs":{"Monarch":{"xref_id":"1011503"}}}


id: MONDO:0013571
data:
  {"annotated_genes":["SJAG_04823"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87794],"is_not":false,"summary":null,"term":"MONDO:0013571"}]},"cv_name":"mondo","definition":"A congenital disorder resulting from a deficiency in erythrocyte catalase, an enzyme responsible for the breakdown of hydrogen peroxide.","definition_xrefs":["Orphanet:926"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete disorder of peroxisomal alpha-, beta- and omega-oxidation (obsolete MONDO:0017753)","termid":"MONDO:0017753"},{"relation_name":"is_a","term_name":"disorder of defective peroxisome oxidative status","termid":"MONDO:0100306"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053"],"is_obsolete":false,"name":"acatalasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:75679","NANDO:1200774","OMIM:614097","DOID:2582","EFO:0004144","GARD:363","UMLS:C0268419","MESH:D020642","ICD9:277.6","NCIT:C84526","HGNC:1516","SCTID:124202004"],"synonyms":[{"name":"acatalasemia","type":"exact"},{"name":"acatalasia","type":"exact"},{"name":"catalase deficiency","type":"exact"},{"name":"deficiency of catalase","type":"exact"}],"termid":"MONDO:0013571","terms_by_termid":{"MONDO:0013571":null},"xrefs":{"Monarch":{"xref_id":"0013571"}}}


id: PBO:0069048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 294, pseudogene","termid":"PBO:0069048"}


id: MONDO:0013139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant severe congenital neutropenia in which the cause of the disease is a mutation in the GFI1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant severe congenital neutropenia","termid":"MONDO:0008742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0000426"],"is_obsolete":false,"name":"neutropenia, severe congenital, 2, autosomal dominant","secondary_identifiers":["OMIM:613107","MEDGEN:413975","UMLS:C2751288","MESH:C567748","GARD:15616","DOID:0112131"],"synonyms":[{"name":"GFI1 autosomal dominant severe congenital neutropenia","type":"exact"},{"name":"SCN2","type":"related"},{"name":"autosomal dominant severe congenital neutropenia caused by mutation in GFI1","type":"exact"},{"name":"neutropenia, severe congenital 2, autosomal dominant","type":"exact"},{"name":"neutropenia, severe congenital, 2, autosomal dominant","type":"exact"}],"termid":"MONDO:0013139","xrefs":{"Monarch":{"xref_id":"0013139"}}}


id: GO:0072057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the inner stripe over time, from its formation to the mature structure. The inner stripe is a deep, centrally located portion of the renal outer medulla and is traversed by thin descending and thick ascending portions of the loops of Henle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"renal outer medulla development","termid":"GO:0072054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner stripe development","termid":"GO:0072057"}


id: MONDO:0008706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ackerman syndrome is characterized by pyramidal molar roots and taurodontism, associated with variable anomalies. It has been described in two generations of one family. Both parents and their six sibs had pyramidal, taurodont or fused molar roots. Some of the patients also had hypotrichosis, an abnormal upper lip, thickened and wide philtrum, and/or juvenile glaucoma. Other features included entropion of the eyelid, syndactyly and clinodactyly of the fifth fingers.","definition_xrefs":["Orphanet:2561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Ackerman syndrome","secondary_identifiers":["MEDGEN:395426","SCTID:722280000","UMLS:C1860167","OMIM:200970","icd11.foundation:1946127088","GARD:469","MESH:C538170"],"synonyms":[{"name":"Ackerman fused molar rooth syndrome","type":"exact"},{"name":"Ackerman syndrome","type":"exact"},{"name":"glaucoma, juvenile, with unusual upper lip and dental roots","type":"related"},{"name":"juvenile glaucoma with unusual upper lip and dental roots","type":"related"},{"name":"molar roots, pyramidal, with juvenile glaucoma and unusual upper lip","type":"related"},{"name":"pyramidal molar-glaucoma-upper abnormal lip syndrome","type":"exact"},{"name":"pyramidal molars, glaucoma, abnormal upper lip","type":"related"}],"termid":"MONDO:0008706","xrefs":{"Monarch":{"xref_id":"0008706"}}}


id: PBO:0060192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MUC12 antisense RNA 1","termid":"PBO:0060192"}


id: FYPO:0001498
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cytochalasin B. Cells stop growing (and may die) at a concentration of cytochalasin B that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to cytochalasin B","synonyms":[{"name":"hypersensitive to cytochalasin B","type":"exact"},{"name":"sensitive to cytochalasin B during mitotic cell cycle","type":"related"},{"name":"sensitive to cytochalasin B during vegetative growth","type":"exact"}],"termid":"FYPO:0001498"}


id: GO:0051228
data:
  {"annotated_genes":["SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77383],"is_not":false,"summary":null,"term":"GO:0051228"}]},"cv_name":"biological_process","definition":"The controlled breakdown of the spindle during a mitotic cell cycle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle organization","termid":"GO:0007052"},{"relation_name":"is_a","term_name":"spindle disassembly","termid":"GO:0051230"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0000226","GO:0007049"],"is_obsolete":false,"name":"mitotic spindle disassembly","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"mitotic spindle breakdown","type":"exact"},{"name":"mitotic spindle catabolism","type":"exact"},{"name":"mitotic spindle degradation","type":"exact"},{"name":"spindle breakdown during mitosis","type":"exact"},{"name":"spindle degradation during mitosis","type":"exact"},{"name":"spindle disassembly during mitosis","type":"exact"}],"termid":"GO:0051228","terms_by_termid":{"GO:0051228":null}}


id: RO:0002215
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a material entity (such as a cell) and a process, in which the material entity has the ability to carry out the process. ","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_part_of","termid":"RO:0002216"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of","termid":"RO:0002215"}


id: GO:0031934
data:
  {"annotated_genes":["SJAG_00756","SJAG_00302","SJAG_03356","SJAG_03789","SJAG_04574","SJAG_01075","SJAG_04039","SJAG_03543","SJAG_03916","SJAG_04186","SJAG_03664","SJAG_03680","SJAG_01540","SJAG_03844","SJAG_03221","SJAG_03942","SJAG_00678","SJAG_02621","SJAG_02299","SJAG_03945","SJAG_02697","SJAG_00335","SJAG_03982","SJAG_01495","SJAG_03193","SJAG_02401","SJAG_02725","SJAG_02119","SJAG_04508","SJAG_03997","SJAG_02778","SJAG_01601","SJAG_03418","SJAG_03635","SJAG_03042","SJAG_01046","SJAG_01708","SJAG_01579","SJAG_00934","SJAG_01873"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61242,61471,62300,64597,73416,74170,89720,89783,92790,93145,95710,95958,98059,98637,98897,101028,101474,106018,106114,109612,110117,111934,112269,112458,114085,114191,114585,114586,115041,115277,115978,116418,117421,119130,119703,119761,119991,120107,120584,120842],"is_not":false,"summary":null,"term":"GO:0031934"}]},"cv_name":"cellular_component","definition":"Heterochromatic regions of the chromosome found at silenced mating-type loci.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin","termid":"GO:0000792"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00302":null,"SJAG_00335":null,"SJAG_00678":null,"SJAG_00756":null,"SJAG_00934":null,"SJAG_01046":null,"SJAG_01075":null,"SJAG_01495":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01601":null,"SJAG_01708":null,"SJAG_01873":null,"SJAG_02119":null,"SJAG_02299":null,"SJAG_02401":null,"SJAG_02621":null,"SJAG_02697":null,"SJAG_02725":null,"SJAG_02778":null,"SJAG_03042":null,"SJAG_03193":null,"SJAG_03221":null,"SJAG_03356":null,"SJAG_03418":null,"SJAG_03543":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03680":null,"SJAG_03789":null,"SJAG_03844":null,"SJAG_03916":null,"SJAG_03942":null,"SJAG_03945":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04039":null,"SJAG_04186":null,"SJAG_04508":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"mating-type region heterochromatin","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0031934","terms_by_termid":{"GO:0031934":null}}


id: PBO:0085627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in export of proteins from the endoplasmic reticulum; ERV15 has a paralog, ERV14, that arose from the whole genome duplication","termid":"PBO:0085627"}


id: PBO:0042187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin B3 pseudogene 1","termid":"PBO:0042187"}


id: PBO:0085787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unconfirmed function; similar to cell surface flocculin Flo11p; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression; in W303 strain one continuous open reading frame comprising of YDL037C, the intergenic region and YDL039C encodes the gene IMI1","termid":"PBO:0085787"}


id: PBO:0057023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 124-1","termid":"PBO:0057023"}


id: MONDO:0032870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with short stature and behavioral abnormalities","secondary_identifiers":["DOID:0111674","UMLS:C5231462","GARD:22581","MEDGEN:1684812","OMIM:618687"],"synonyms":[{"name":"IDDSSBA","type":"related"},{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER WITH SHORT STATURE AND BEHAVIORAL ABNORMALITIES","type":"related"}],"termid":"MONDO:0032870","xrefs":{"Monarch":{"xref_id":"0032870"}}}


id: GO:0034782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dimethylmalonate + H+ = isobutyrate + CO2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dimethylmalonate decarboxylase activity (obsolete GO:0034782)","termid":"GO:0034782"}


id: GO:0060503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a bud in the lung increases radially.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis elongation","termid":"GO:0003401"},{"relation_name":"part_of","term_name":"epithelial tube branching involved in lung morphogenesis","termid":"GO:0060441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bud dilation involved in lung branching","synonyms":[{"name":"bud expansion","type":"exact"}],"termid":"GO:0060503"}


id: MONDO:0958356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central precocious puberty in male","termid":"MONDO:0958270"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary central precocious puberty in male","secondary_identifiers":["Orphanet:650087","UMLS:C5816763","MEDGEN:1853130"],"termid":"MONDO:0958356","xrefs":{"Monarch":{"xref_id":"0958356"}}}


id: PBO:0027934
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_in_stationary_phase","termid":"PBO:0027934"}


id: GO:0102985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the introduction of a cis double bond at position 12 of fatty-acyl-CoAs that contain a cis double bond at position 9. Specific reactions include: (9Z)-hexadecenoyl-CoA + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = (9Z,12Z)-hexadecadienoyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O; and (9Z)-hexadecenoyl-CoA + 2 Fe(II)-[cytochrome b5] + O2 + 2 H(+) = (9Z,12Z)-hexadecadienoyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["EC:1.14.19.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA desaturase activity","termid":"GO:0016215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acyl-CoA (9+3)-desaturase activity","synonyms":[{"name":"delta12-fatty-acid desaturase activity","type":"exact"}],"termid":"GO:0102985"}


id: GO:0061236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the mesonephric comma-shaped body is generated and organized. The mesonephric comma-shaped body is the precursor structure to the mesonephric S-shaped body that contributes to the morphogenesis of a nephron in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"comma-shaped body morphogenesis","termid":"GO:0072049"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric comma-shaped body morphogenesis","termid":"GO:0061236"}


id: FYPO:0000784
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the nucleus is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"},{"relation_name":"is_a","term_name":"protein mislocalized to nucleus","termid":"FYPO:0003453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"protein mislocalized to nucleus during vegetative growth","secondary_identifiers":["FYPO:0001251"],"synonyms":[{"name":"ectopic protein localization to nucleus during vegetative growth","type":"exact"},{"name":"protein mislocalised to nucleus during vegetative growth","type":"exact"},{"name":"protein mislocalized to nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000784"}


id: PBO:0065124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase D2","termid":"PBO:0065124"}


id: GO:0061390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the direction of cell growth.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"regulation of direction of cell growth","termid":"GO:0061389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of direction of cell growth","termid":"GO:0061390"}


id: PBO:0000338
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae MAC1","termid":"PBO:0000338"}


id: MONDO:1012915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis that occurs in Rhesus monkey due to a mutation in the TARDBP gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iatrogenic disease, non-human animal","termid":"MONDO:1011322"},{"relation_name":"is_a","term_name":"amyotrophic lateral sclerosis, non-human animal","termid":"MONDO:1012954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyotrophic lateral sclerosis, TARDBP-related, Rhesus monkey","secondary_identifiers":["OMIA:002492-9544"],"termid":"MONDO:1012915","xrefs":{"Monarch":{"xref_id":"1012915"}}}


id: PBO:0042900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor H related 4","termid":"PBO:0042900"}


id: GO:0045682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epidermis development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"epidermis development","termid":"GO:0008544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epidermis development","synonyms":[{"name":"regulation of epidermal development","type":"exact"},{"name":"regulation of hypodermis development","type":"related"}],"termid":"GO:0045682"}


id: PBO:0081181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger GATA like protein 1","termid":"PBO:0081181"}


id: GO:0003348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cardiac endothelial cell.","definition_xrefs":["GOC:dph","PMID:18722343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"},{"relation_name":"is_a","term_name":"endothelial cell differentiation","termid":"GO:0045446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac endothelial cell differentiation","termid":"GO:0003348"}


id: FYPO:0005833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport along microtubules to the cell tip is decreased. Transport of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell tip during vegetative growth","termid":"FYPO:0001586"},{"relation_name":"is_a","term_name":"decreased protein transport along microtubule during vegetative growth","termid":"FYPO:0005494"},{"relation_name":"is_a","term_name":"abnormal protein transport along microtubule to cell tip during vegetative growth","termid":"FYPO:0005831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein transport along microtubule to cell tip during vegetative growth","synonyms":[{"name":"decreased protein movement along microtubule to cell tip during vegetative growth","type":"exact"},{"name":"decreased protein transport during mitotic cell cycle","type":"related"},{"name":"reduced protein transport along microtubule to cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0005833"}


id: PBO:0028814
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_primary_amine_oxidase_activity","termid":"PBO:0028814"}


id: GO:0043916
data:
  {"annotated_genes":["SJAG_01971"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103514],"is_not":false,"summary":null,"term":"GO:0043916"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA containing 7-methylguanine + H2O = DNA with abasic site + 7-methylguanine. This reaction is the hydrolysis of DNA by cleavage of the N-C1' glycosidic bond between the damaged DNA 7-methylguanine and the deoxyribose sugar to remove the 7-methylguanine, leaving an abasic site.","definition_xrefs":["GOC:jl","PMID:16468998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylbase DNA N-glycosylase activity","termid":"GO:0003905"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01971":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"DNA-7-methylguanine glycosylase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043916","terms_by_termid":{"GO:0043916":null}}


id: MONDO:0100124
data:
  {"annotated_genes":["SJAG_04631"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010671"},{"annotations":[88734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010457"}]},"cv_name":"mondo","definition":"Ab X-linked syndromic intellectual disability in which the cause of the disease is a mutation in the NAA10 gene. Patients with variants in the NAA10 gene demonstrate symptoms such as developmental delay, intellectual disability, autism spectrum disorder, hypotonia, facial dysmorphism, cardiac anomalies, and/or skeletal anomalies.","definition_xrefs":["PMID:26522270","PMID:31174490","PMID:29748569","PMID:31088393","PMID:28967461","PMID:27094817","PMID:31127942","PMID:29558889","PMID:24431331","PMID:25099252","PMID:23871722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04631":null},"genotype_count":0,"is_obsolete":false,"name":"NAA10-related syndrome","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"NAA10 X-linked syndromic intellectual disability","type":"exact"},{"name":"NAA10-related syndrome","type":"exact"},{"name":"X-linked syndromic intellectual disability caused by mutation in NAA10","type":"exact"}],"termid":"MONDO:0100124","terms_by_termid":{"MONDO:0010457":null,"MONDO:0010671":null},"xrefs":{"Monarch":{"xref_id":"0100124"}}}


id: MONDO:0005275
data:
  {"annotated_genes":["SJAG_04114","SJAG_05979","SJAG_02194","SJAG_03125","SJAG_00169","SJAG_00229","SJAG_03626","SJAG_03453","SJAG_02805","SJAG_01836","SJAG_01159","SJAG_02206","SJAG_03855","SJAG_00566","SJAG_03689","SJAG_00570"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010926"},{"annotations":[86874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800029"},{"annotations":[88644,89196,88643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008903"},{"annotations":[88032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011871"},{"annotations":[88180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"},{"annotations":[88396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957261"},{"annotations":[88395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957263"},{"annotations":[88161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957294"},{"annotations":[87992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013878"},{"annotations":[87115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014612"},{"annotations":[88982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030690"},{"annotations":[88925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009329"},{"annotations":[88904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100215"},{"annotations":[87688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100220"},{"annotations":[87663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014206"}]},"cv_name":"mondo","definition":"A disease involving the lung.","direct_ancestors":[{"relation_name":"is_a","term_name":"lower respiratory tract disorder","termid":"MONDO:0000270"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00229":null,"SJAG_00566":null,"SJAG_00570":null,"SJAG_01159":null,"SJAG_01836":null,"SJAG_02194":null,"SJAG_02206":null,"SJAG_02805":null,"SJAG_03125":null,"SJAG_03453":null,"SJAG_03626":null,"SJAG_03689":null,"SJAG_03855":null,"SJAG_04114":null,"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"lung disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:7399","MESH:D008171","NCIT:C3198","UMLS:C0024115","EFO:0003818","SCTID:19829001","ICD9:518.89","DOID:850"],"synonyms":[{"name":"disease of lung","type":"exact"},{"name":"disease or disorder of lung","type":"exact"},{"name":"disorder of lung","type":"exact"},{"name":"lung disease","type":"exact"},{"name":"lung disease or disorder","type":"exact"},{"name":"lung disorder","type":"exact"},{"name":"lung disorders","type":"exact"},{"name":"pulmonary disease","type":"exact"},{"name":"pulmonary diseases","type":"exact"},{"name":"pulmonary disorder","type":"exact"},{"name":"pulmonary disorders","type":"exact"}],"termid":"MONDO:0005275","terms_by_termid":{"MONDO:0008903":null,"MONDO:0009329":null,"MONDO:0010926":null,"MONDO:0011014":null,"MONDO:0011871":null,"MONDO:0013878":null,"MONDO:0014206":null,"MONDO:0014612":null,"MONDO:0030690":null,"MONDO:0100215":null,"MONDO:0100220":null,"MONDO:0800029":null,"MONDO:0957261":null,"MONDO:0957263":null,"MONDO:0957294":null},"xrefs":{"Monarch":{"xref_id":"0005275"}}}


id: GO:0005949
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A heterodimeric enzyme composed of an alpha and beta subunit. Catalyzes the formation of L-2-aminoadipate from L-2-aminoadipate 6-semialdehyde.","definition_xrefs":["EC:1.2.1.31"],"gene_count":0,"genotype_count":0,"name":"obsolete aminoadipate-semialdehyde dehydrogenase complex (obsolete GO:0005949)","synonyms":[{"name":"aminoadipate-semialdehyde dehydrogenase complex","type":"exact"}],"termid":"GO:0005949"}


id: PBO:0077227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMC3 antisense RNA 1","termid":"PBO:0077227"}


id: GO:0004712
data:
  {"annotated_genes":["SJAG_02342","SJAG_01181","SJAG_03592","SJAG_03067","SJAG_04486","SJAG_00993"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93621,100920,110547],"is_not":false,"summary":null,"term":"GO:0004712"},{"annotations":[76191,78075,73298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004708"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions: ATP + a protein serine = ADP + protein serine phosphate; ATP + a protein threonine = ADP + protein threonine phosphate; and ATP + a protein tyrosine = ADP + protein tyrosine phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null,"SJAG_03067":null,"SJAG_03592":null,"SJAG_04486":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016740","GO:0016301","GO:0004672","GO:0003824"],"is_obsolete":false,"name":"protein serine/threonine/tyrosine kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6802924","EC:2.7.12.1","Reactome:R-HSA-6802916","Reactome:R-HSA-6802910","Reactome:R-HSA-9656212","Reactome:R-HSA-6802927","Reactome:R-HSA-5672969","Reactome:R-HSA-6802918","Reactome:R-HSA-6802922","Reactome:R-HSA-6802941","Reactome:R-HSA-5674373","Reactome:R-HSA-6802921"],"synonyms":[{"name":"dual-specificity kinase activity","type":"exact"},{"name":"dual-specificity protein kinase","type":"exact"},{"name":"protein threonine/tyrosine kinase activity","type":"narrow"}],"termid":"GO:0004712","terms_by_termid":{"GO:0004708":null,"GO:0004712":null}}


id: GO:0051954
data:
  {"annotated_genes":["SJAG_05346","SJAG_03591","SJAG_00991","SJAG_02605"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95211,93626,112519,100793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[100794,95212,93627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[95213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of amines into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of amine transport","termid":"GO:0051952"},{"relation_name":"positively_regulates","term_name":"amine transport","termid":"GO:0015837"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of amine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of amine transport","type":"narrow"},{"name":"stimulation of amine transport","type":"narrow"},{"name":"up regulation of amine transport","type":"exact"},{"name":"up-regulation of amine transport","type":"exact"},{"name":"upregulation of amine transport","type":"exact"}],"termid":"GO:0051954","terms_by_termid":{"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: GO:0015583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: protein N-phosphohistidine + beta-glucoside(out) = protein histidine + beta-glucoside phosphate(in). The beta-glucoside may be arbutin, salicin or cellobiose.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-glucoside [arbutin-salicin-cellobiose] permease activity (obsolete GO:0015583)","synonyms":[{"name":"beta-glucoside [arbutin-salicin-cellobiose] permease activity","type":"exact"}],"termid":"GO:0015583"}


id: MONDO:0024620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"infectious meningitis","termid":"MONDO:0004796"},{"relation_name":"is_a","term_name":"viral infection of central nervous system","termid":"MONDO:0024318"},{"relation_name":"is_a","term_name":"poliovirus infection","termid":"MONDO:0024618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meningitis caused by poliovirus","secondary_identifiers":["MEDGEN:928803","SCTID:721765009","UMLS:C4303134"],"synonyms":[{"name":"meningitis caused by human poliovirus","type":"exact"},{"name":"polio virus meningitis","type":"related"}],"termid":"MONDO:0024620","xrefs":{"Monarch":{"xref_id":"0024620"}}}


id: PBO:0035764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_heterochromatin_assembly_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035764"}


id: MONDO:0019656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sporadic idiopathic steroid-resistant nephrotic syndrome","termid":"MONDO:0019401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"sporadic idiopathic steroid-resistant nephrotic syndrome with diffuse mesangial sclerosis","secondary_identifiers":["Orphanet:93220"],"termid":"MONDO:0019656","xrefs":{"Monarch":{"xref_id":"0019656"}}}


id: FYPO:0008249
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at one or more protein-coding genes is decreased.","definition_xrefs":["PMID:25356590","PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromatin at protein coding gene","termid":"FYPO:0008249"}


id: GO:1901527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any abscisic acid mediated signaling pathway that is involved in stomatal movement.","definition_xrefs":["PMID:22730405","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abscisic acid-activated signaling pathway","termid":"GO:0009738"},{"relation_name":"part_of","term_name":"stomatal movement","termid":"GO:0010118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"abscisic acid-activated signaling pathway involved in stomatal movement","synonyms":[{"name":"abscisic acid mediated signaling pathway involved in stomatal movement","type":"related"},{"name":"abscisic acid mediated signalling involved in stomatal movement","type":"exact"}],"termid":"GO:1901527"}


id: PBO:0067203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 268, pseudogene","termid":"PBO:0067203"}


id: PBO:0049569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 6","termid":"PBO:0049569"}


id: PBO:0067225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 294, pseudogene","termid":"PBO:0067225"}


id: MONDO:1012145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant hyperthermia, non-human animal","termid":"MONDO:1011713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hyperthermia, dog","secondary_identifiers":["OMIA:000621-9615"],"termid":"MONDO:1012145","xrefs":{"Monarch":{"xref_id":"1012145"}}}


id: GO:0015360
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: acetate(out) + H+(out) = acetate(in) + H+(in).","definition_xrefs":["TC:2.A.44.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"acetate:monoatomic cation symporter activity","termid":"GO:0043893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"acetate:proton symporter activity","secondary_identifiers":["GO:0015357"],"synonyms":[{"name":"acetate:hydrogen symporter activity","type":"exact"},{"name":"hydrogen:acetate symporter activity","type":"exact"}],"termid":"GO:0015360"}


id: GO:0035023
data:
  {"annotated_genes":["SJAG_04462"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035024"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Rho protein signal transduction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"regulates","term_name":"Rho protein signal transduction","termid":"GO:0007266"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04462":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of Rho protein signal transduction","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0035023","terms_by_termid":{"GO:0035024":null}}


id: PBO:0044673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDC antisense RNA 1","termid":"PBO:0044673"}


id: PBO:0065795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H domain containing 2 pseudogene 1","termid":"PBO:0065795"}


id: PBO:0082119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetylornithine aminotransferase; catalyzes the fourth step in the biosynthesis of the arginine precursor ornithine","termid":"PBO:0082119"}


id: PBO:0075813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSBP3 pseudogene 2","termid":"PBO:0075813"}


id: GO:0061472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Process whereby karyomere membranes fuse during interphase to form a single lobed nucleus.","definition_xrefs":["PMID:2734396","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane fusion","termid":"GO:0090174"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic nuclear membrane reassembly","termid":"GO:0007084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0007049","GO:0061024","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"karyomere membrane fusion","termid":"GO:0061472"}


id: GO:1902170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive nitrogen species stimulus.","definition_xrefs":["PMID:22504638","GOC:sl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to reactive nitrogen species","secondary_identifiers":["GO:1990106"],"termid":"GO:1902170"}


id: PBO:0038886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase activating polypeptide 1","termid":"PBO:0038886"}


id: PBO:0005758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex subunit Swc5","termid":"PBO:0005758"}


id: GO:0140006
data:
  {"annotated_genes":["SJAG_00184","SJAG_04574","SJAG_01579","SJAG_03916","SJAG_01601"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140002"},{"annotations":[106030,93156,101048,112475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062072"}]},"cv_name":"molecular_function","definition":"A histone reader that specifically binds either to an unmodified histone H3 or a form modified by a post-translational modification on a specific residue. The most common PTMs on histones are methylation, acetylation and phosphorylation.","definition_xrefs":["PMID:25688442","PMID:11498575","PMID:31082667","PMID:34726351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone reader activity","termid":"GO:0140566"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00184":null,"SJAG_01579":null,"SJAG_01601":null,"SJAG_03916":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140566"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0030674","GO:0140566","GO:0060090"],"is_obsolete":false,"name":"histone H3 reader activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140006","terms_by_termid":{"GO:0062072":null,"GO:0140002":null}}


id: MONDO:1012217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyarthritis, non-human animal","termid":"MONDO:1011952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyarthritis, dog","secondary_identifiers":["OMIA:000805-9615"],"termid":"MONDO:1012217","xrefs":{"Monarch":{"xref_id":"1012217"}}}


id: FYECO:0000451
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in minimal medium containing a high concentration of lactate (>2%) as carbon source, salts and water.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ lactate","termid":"FYECO:0000451"}


id: FYPO:0003627
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 a.a.)","uniquename":"SJAG_01143:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000644"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"},{"relation_name":"is_a","term_name":"protein localization phenotype","termid":"FYPO:0002333"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01143":null},"genotype_count":1,"genotypes_by_uniquename":{"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"mid1-delta(711-723 a.a.)(aa)","display_uniquename":"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_01143"],"single_locus_genotype_uniquenames":["mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"normal cellular protein localisation","type":"exact"},{"name":"normal cellular protein localization","type":"exact"},{"name":"normal protein localisation","type":"exact"}],"termid":"FYPO:0003627","terms_by_termid":{"FYECO:0000137":null,"FYPO:0000644":null}}


id: SO:0001974
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcription factor binding site with consensus sequence CCGCGNGGNGGCAG, bound by CCCTF-binding factor.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTCF_binding_site","synonyms":[{"name":"CCCTF binding site","type":"exact"},{"name":"CTCF binding site","type":"exact"}],"termid":"SO:0001974"}


id: GO:0008451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.","definition_xrefs":["EC:3.4.11.9"],"gene_count":0,"genotype_count":0,"name":"obsolete X-Pro aminopeptidase activity (obsolete GO:0008451)","synonyms":[{"name":"X-Pro aminopeptidase activity","type":"exact"},{"name":"Xaa-Pro aminopeptidase activity","type":"exact"},{"name":"aminoacylproline aminopeptidase activity","type":"related"},{"name":"aminopeptidase P","type":"exact"},{"name":"proline aminopeptidase","type":"broad"}],"termid":"GO:0008451"}


id: PBO:0045900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic elongation factor, selenocysteine-tRNA specific","termid":"PBO:0045900"}


id: PBO:0067315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 401, pseudogene","termid":"PBO:0067315"}


id: PBO:0081917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 886, pseudogene","termid":"PBO:0081917"}


id: FYPO:0005048
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at RNA polymerase II promoters is increased.","definition_xrefs":["PMID:20605454","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to chromatin at RNA polymerase II promoter during vegetative growth","synonyms":[{"name":"increased protein localisation to chromatin at RNA polymerase II promoter during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at RNA pol II promoter during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at RNA polymerase II promoter during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005048"}


