# terms

id: GO:1990467
data:
  {"annotated_genes":["SJAG_02165"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[79635],"is_not":false,"summary":null,"term":"GO:1990467"}]},"cv_name":"cellular_component","definition":"A NuA3 complex that catalyzes the acetylation of Histone H3. In S. cerevisiae, this complex consists of Eaf6p, Nto1p, Sas3p, Taf14p, Yng1p and associates with H3K4me3 using Yng1p.","definition_xrefs":["GOC:rb","PMID:25104842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NuA3 histone acetyltransferase complex","termid":"GO:0033100"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02165":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"NuA3a histone acetyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:1990467","terms_by_termid":{"GO:1990467":null}}


id: GO:0044078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont organism activates or increases the frequency, rate or extent of receptor mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport, in its host organism.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of host receptor-mediated endocytosis (obsolete GO:0044078)","synonyms":[{"name":"positive regulation of host receptor-mediated endocytosis by symbiont","type":"exact"}],"termid":"GO:0044078"}


id: GO:0120237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a terminal acetylenic compound, a compound which contains a terminal alkyne moiety in which a carbon of the carbon-carbon triple bond (aka C#C) moiety is attached to a hydrogen atom.","definition_xrefs":["DOI:10.1007/978-1-4615-4913-0_3","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal acetylenic compound metabolic process","termid":"GO:0120244"},{"relation_name":"is_a","term_name":"acetylenic compound biosynthetic process","termid":"GO:0120247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"terminal acetylenic compound biosynthetic process","synonyms":[{"name":"terminal alkyne substituted compound anabolic process","type":"exact"},{"name":"terminal alkyne substituted compound anabolism","type":"exact"},{"name":"terminal alkyne substituted compound biosynthesis","type":"exact"},{"name":"terminal alkyne substituted compound biosynthetic process","type":"exact"},{"name":"terminal alkyne substituted compound synthesis","type":"exact"}],"termid":"GO:0120237"}


id: PBO:0000842
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.4.2","termid":"PBO:0000842"}


id: GO:0035367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of thymine, 5-methyluracil, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:sl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound transport","termid":"GO:0032241"},{"relation_name":"is_a","term_name":"regulation of thymine transport","termid":"GO:0035365"},{"relation_name":"positively_regulates","term_name":"thymine transport","termid":"GO:0035364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of thymine transport","synonyms":[{"name":"positive regulation of 5-methyluracil transport","type":"exact"}],"termid":"GO:0035367"}


id: PBO:0040482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 3","termid":"PBO:0040482"}


id: GO:0044331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell via a cadherin, transmembrane proteins having repeating extracellular calcium ion binding domains.","definition_xrefs":["PMID:10923970","GOC:jl","GOC:hjd","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-cell adhesion mediated by cadherin","termid":"GO:0044331"}


id: PBO:0086839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein tyrosine phosphatase; required for cell cycle arrest in response to oxidative damage of DNA","termid":"PBO:0086839"}


id: PBO:0024800
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-involved_in_or_regulates","termid":"PBO:0024800"}


id: PBO:0011404
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell,_anatomy,_cellular_component,_biological_process_and_developmental_stage","termid":"PBO:0011404"}


id: PBO:0109226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall alpha-1,3-glucan synthase Mok12","termid":"PBO:0109226"}


id: MOD:01513
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modifications that have monoisotopic mass differences from their respective origins that are nominally equal (sometimes called isobaric) at a resolution below 0.1 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by isobaric sets","termid":"MOD:00538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.1 Da","termid":"MOD:01513"}


id: MONDO:0006197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary carcinoma of the endometrium that is similar to the small cell carcinoma of the lung, histologically.","definition_xrefs":["NCIT:C40155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"endometrial carcinoma","termid":"MONDO:0002447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"endometrial small cell carcinoma","secondary_identifiers":["icd11.foundation:845680139","EFO:1000239","UMLS:C1516858","DOID:7139","MEDGEN:309057"],"synonyms":[{"name":"endometrial small cell carcinoma","type":"exact"},{"name":"endometrium small cell carcinoma","type":"exact"},{"name":"small cell carcinoma of endometrium","type":"exact"}],"termid":"MONDO:0006197","xrefs":{"Monarch":{"xref_id":"0006197"}}}


id: GO:0018516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-chlorobenzoyl-CoA + chloride + NADP+ = 2,4-dichlorobenzoyl-CoA + NADPH.","definition_xrefs":["RHEA:23076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond","termid":"GO:0046992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2,4-dichlorobenzoyl-CoA reductase activity","secondary_identifiers":["KEGG_REACTION:R05276","EC:1.21.1.2","UM-BBD_reactionID:r0138","MetaCyc:1.3.1.63-RXN"],"synonyms":[{"name":"4-chlorobenzoyl-CoA:NADP+ oxidoreductase (halogenating)","type":"related"}],"termid":"GO:0018516"}


id: GO:0021553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the olfactory nerve over time, from its formation to the mature structure. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem.","definition_xrefs":["GOC:cls","GOC:jid","ISBN:0838580343","GOC:dgh","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory nerve development","synonyms":[{"name":"CN 1 development","type":"related"},{"name":"cranial nerve 1 development","type":"exact"},{"name":"cranial nerve I development","type":"exact"}],"termid":"GO:0021553"}


id: GO:1901771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of daunorubicin.","definition_xrefs":["UniPathway:UPA00054","GOC:yaf","PMID:7601857","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic biosynthetic process","termid":"GO:0030648"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"daunorubicin metabolic process","termid":"GO:0044597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"daunorubicin biosynthetic process","synonyms":[{"name":"daunorubicin anabolism","type":"exact"},{"name":"daunorubicin biosynthesis","type":"exact"},{"name":"daunorubicin formation","type":"exact"},{"name":"daunorubicin synthesis","type":"exact"}],"termid":"GO:1901771"}


id: MONDO:0008120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spinocerebellar ataxia type 7 (obsolete MONDO:0008120)","secondary_identifiers":["NANDO:1200047"],"termid":"MONDO:0008120","xrefs":{"Monarch":{"xref_id":"0008120"}}}


id: PBO:0052863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-6","termid":"PBO:0052863"}


id: PBO:0045868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 beta 2 pseudogene 1","termid":"PBO:0045868"}


id: PBO:0000750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated lipase Atg15","termid":"PBO:0000750"}


id: MONDO:0043777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive enlargement of the nose due to hypertrophy of the sebaceous glands of the tip of the nose and fibrosis. It usually affects older men and is associated with long-standing acne rosacea. It presents as a pink lobulated mass with dilated vessels in the nose.","definition_xrefs":["NCIT:C34989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rosacea","termid":"MONDO:0006604"},{"relation_name":"is_a","term_name":"sebaceous gland disorder","termid":"MONDO:0006607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"rhinophyma","secondary_identifiers":["MEDGEN:48451","UMLS:C0035466","SCTID:19877001","icd11.foundation:158901546","MESH:D012224"],"synonyms":[{"name":"Rhinophymas","type":"related"},{"name":"hypertrophic rosacea","type":"related"},{"name":"rhinophyma","type":"exact"}],"termid":"MONDO:0043777","xrefs":{"Monarch":{"xref_id":"0043777"}}}


id: MONDO:0017442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital absence of thigh and lower leg with foot present","secondary_identifiers":["GARD:21193","ICD9:755.33","Orphanet:294977","UMLS:C0265626","icd11.foundation:1165997650","ICD10CM:Q72.1","MEDGEN:539373","SCTID:55852007"],"synonyms":[{"name":"Femorotibiofibular intercalary transverse meromelia","type":"exact"}],"termid":"MONDO:0017442","xrefs":{"Monarch":{"xref_id":"0017442"}}}


id: GO:0042862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of achromobactin, a citrate siderophore.","definition_xrefs":["GOC:jl","PMID:10928541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"achromobactin metabolic process","termid":"GO:0042860"},{"relation_name":"is_a","term_name":"siderophore catabolic process","termid":"GO:0046215"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"achromobactin catabolic process","synonyms":[{"name":"achromobactin breakdown","type":"exact"},{"name":"achromobactin catabolism","type":"exact"},{"name":"achromobactin degradation","type":"exact"}],"termid":"GO:0042862"}


id: PBO:0109167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-PARP type zinc finger protein Hpz1, implicated in DNA repair","termid":"PBO:0109167"}


id: GO:2000680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of rubidium ion transport.","definition_xrefs":["GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of rubidium ion transport (obsolete GO:2000680)","synonyms":[{"name":"regulation of Rb+ transport","type":"exact"},{"name":"regulation of rubidium cation transport","type":"exact"}],"termid":"GO:2000680"}


id: MONDO:0007269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial dilated cardiomyopathy with conduction defect due to LMNA mutation is a rare familial dilated cardiomyopathy characterized by left ventricular enlargement and/or reduced systolic function preceded or accompanied by significant conduction system disease and/or arrhythmias including bradyarrhythmias, supraventricular or ventricular arrhythmias. Disease onset is usually in early to mid-adulthood. Sudden cardiac death may occur and may be the presenting symptom. In some cases, it is associated with skeletal myopathy and elevated serum creatine kinase.","definition_xrefs":["Orphanet:300751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1A","secondary_identifiers":["DOID:0110425","GARD:18615","SCTID:766883006","MEDGEN:258500","OMIM:115200","UMLS:C1449563"],"synonyms":[{"name":"CDCD1","type":"exact"},{"name":"LMNA familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy dilated with conduction defect type 1","type":"exact"},{"name":"cardiomyopathy, congestive","type":"related"},{"name":"cardiomyopathy, dilated, 1A","type":"related"},{"name":"cardiomyopathy, dilated, type 1A","type":"exact"},{"name":"cardiomyopathy, dilated, with conduction defect 1","type":"related"},{"name":"cardiomyopathy, familial idiopathic","type":"related"},{"name":"cardiomyopathy, idiopathic dilated","type":"related"},{"name":"dilated cardiomyopathy 1A","type":"exact"},{"name":"dilated cardiomyopathy type 1A","type":"exact"},{"name":"dilated cardiomyopathy with conduction defect 1","type":"exact"},{"name":"familial dilated cardiomyopathy with conduction defect due to LMNA mutation","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in LMNA","type":"exact"}],"termid":"MONDO:0007269","xrefs":{"Monarch":{"xref_id":"0007269"}}}


id: PBO:0068377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 170","termid":"PBO:0068377"}


id: MONDO:1012955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary malformation of the skeletal system in non-human animals.","definition_xrefs":["PMID:23696895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachnomelia syndrome, non-human animal","termid":"MONDO:1012955","xrefs":{"Monarch":{"xref_id":"1012955"}}}


id: MONDO:0020477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progeria-associated arthropathy","secondary_identifiers":["Orphanet:99706"],"termid":"MONDO:0020477","xrefs":{"Monarch":{"xref_id":"0020477"}}}


id: PBO:0041396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C6","termid":"PBO:0041396"}


id: PBO:0002107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A)-specific ribonuclease complex subunit Pan3 (predicted)","termid":"PBO:0002107"}


id: PBO:0061442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NR2F1 antisense RNA 1","termid":"PBO:0061442"}


id: GO:0015517
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: galactose(out) + H+(out) = galactose(in) + H+(in).","definition_xrefs":["TC:2.A.1.1.9","TC:2.A.1.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose transmembrane transporter activity","termid":"GO:0005354"},{"relation_name":"is_a","term_name":"hexose:proton symporter activity","termid":"GO:0009679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"galactose:proton symporter activity","synonyms":[{"name":"galactose:hydrogen symporter activity","type":"exact"},{"name":"lactose, galactose:hydrogen symporter activity","type":"broad"}],"termid":"GO:0015517"}


id: FYPO:0007636
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of lysine at position 9 of histone H3 in one or more promoter regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0000892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H3-K9 acetylation at promoter during vegetative growth","synonyms":[{"name":"increased histone H3-K9 acetylation at promoter during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 acetylation at promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0007636"}


id: MONDO:1010747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ehlers-Danlos syndrome in domestic cats in which the cause of the disease is a mutation in the ADAMTS2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, domestic cat","termid":"MONDO:1011494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, dermatosparaxis type, ADAMTS2-related, domestic cat","secondary_identifiers":["OMIA:000328-9685"],"synonyms":[{"name":"dEDS","type":"exact"}],"termid":"MONDO:1010747","xrefs":{"Monarch":{"xref_id":"1010747"}}}


id: GO:1904657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sensory perception of sweet taste.","definition_xrefs":["GOC:mr","GO_REF:0000058","PMID:1716172","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nervous system process","termid":"GO:0031645"},{"relation_name":"is_a","term_name":"regulation of sensory perception of sweet taste","termid":"GO:1904656"},{"relation_name":"negatively_regulates","term_name":"sensory perception of sweet taste","termid":"GO:0050916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sensory perception of sweet taste","synonyms":[{"name":"down regulation of sensory perception of sweet taste","type":"exact"},{"name":"down regulation of sweet taste perception","type":"exact"},{"name":"down-regulation of sensory perception of sweet taste","type":"exact"},{"name":"down-regulation of sweet taste perception","type":"exact"},{"name":"downregulation of sensory perception of sweet taste","type":"exact"},{"name":"downregulation of sweet taste perception","type":"exact"},{"name":"inhibition of sensory perception of sweet taste","type":"narrow"},{"name":"inhibition of sweet taste perception","type":"narrow"},{"name":"negative regulation of sweet taste perception","type":"exact"}],"termid":"GO:1904657"}


id: GO:0033955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which copies of the mitochondrial genome are distributed into daughter mitochondria upon mitochondrial fission.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial DNA inheritance (obsolete GO:0033955)","synonyms":[{"name":"mitochondrial DNA segregation","type":"related"},{"name":"mitochondrial chromosome segregation","type":"related"}],"termid":"GO:0033955"}


id: GO:0030815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cAMP metabolic process (obsolete GO:0030815)","synonyms":[{"name":"down regulation of cAMP metabolic process","type":"exact"},{"name":"down-regulation of cAMP metabolic process","type":"exact"},{"name":"downregulation of cAMP metabolic process","type":"exact"},{"name":"inhibition of cAMP metabolic process","type":"narrow"},{"name":"negative regulation of 3',5' cAMP metabolic process","type":"exact"},{"name":"negative regulation of 3',5' cAMP metabolism","type":"exact"},{"name":"negative regulation of 3',5'-cAMP metabolic process","type":"exact"},{"name":"negative regulation of 3',5'-cAMP metabolism","type":"exact"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate metabolic process","type":"exact"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate metabolism","type":"exact"},{"name":"negative regulation of cAMP metabolism","type":"exact"},{"name":"negative regulation of cyclic AMP metabolic process","type":"exact"},{"name":"negative regulation of cyclic AMP metabolism","type":"exact"}],"termid":"GO:0030815"}


id: PBO:0011411
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-not_occurs_at","termid":"PBO:0011411"}


id: GO:1903067
data:
  {"annotated_genes":["SJAG_01373","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92836,97755],"is_not":false,"summary":null,"term":"GO:1903067"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cell tip.","definition_xrefs":["GO_REF:0000058","PMID:24554432","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell tip","termid":"GO:1903066"},{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"negatively_regulates","term_name":"protein localization to cell tip","termid":"GO:1990151"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01373":null,"SJAG_02392":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to cell tip","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein localisation to cell tip","type":"exact"},{"name":"down regulation of protein localization to cell tip","type":"exact"},{"name":"down-regulation of protein localisation to cell tip","type":"exact"},{"name":"down-regulation of protein localization to cell tip","type":"exact"},{"name":"downregulation of protein localisation to cell tip","type":"exact"},{"name":"downregulation of protein localization to cell tip","type":"exact"},{"name":"inhibition of protein localisation to cell tip","type":"narrow"},{"name":"inhibition of protein localization to cell tip","type":"narrow"},{"name":"negative regulation of protein localisation to cell tip","type":"exact"}],"termid":"GO:1903067","terms_by_termid":{"GO:1903067":null}}


id: PBO:0081032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 12A","termid":"PBO:0081032"}


id: PATO:0001402
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular potency that is the capacity to form multiple differentiated cell types.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Multipotent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multipotent","termid":"PATO:0001402"}


id: GO:0097655
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the serpin protein family (serine protease inhibitors or classified inhibitor family I4). Serpins are a broadly distributed family of protease inhibitors that use a conformational change to inhibit target enzymes. They are central in controlling many important proteolytic cascades. The majority of serpins inhibit serine proteases, but serpins that inhibit caspases and papain-like cysteine proteases have also been identified. Rarely, serpins perform a non-inhibitory function; for example, several human serpins function as hormone transporters and certain serpins function as molecular chaperones or tumor suppressors.","definition_xrefs":["InterPro:IPR000215","GOC:mr","PMID:16737556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"serpin family protein binding","termid":"GO:0097655"}


id: PBO:0071787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p14","termid":"PBO:0071787"}


id: PBO:0031874
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deletion Bleomycin Sensitive","termid":"PBO:0031874"}


id: GO:0031665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signaling in response to detection of lipopolysaccharide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to biotic stimulus","termid":"GO:0002832"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of lipopolysaccharide-mediated signaling pathway","termid":"GO:0031664"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"negatively_regulates","term_name":"lipopolysaccharide-mediated signaling pathway","termid":"GO:0031663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipopolysaccharide-mediated signaling pathway","synonyms":[{"name":"down regulation of lipopolysaccharide-mediated signaling pathway","type":"exact"},{"name":"down-regulation of lipopolysaccharide-mediated signaling pathway","type":"exact"},{"name":"downregulation of lipopolysaccharide-mediated signaling pathway","type":"exact"},{"name":"inhibition of lipopolysaccharide-mediated signaling pathway","type":"narrow"},{"name":"negative regulation of LPS-mediated signaling pathway","type":"exact"},{"name":"negative regulation of lipopolysaccharide-mediated signalling pathway","type":"exact"}],"termid":"GO:0031665"}


id: MONDO:0032885
data:
  {"annotated_genes":["SJAG_03423","SJAG_01608"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88640,88641],"is_not":false,"summary":null,"term":"MONDO:0032885"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01608":null,"SJAG_03423":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, Isidor-Toutain type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618728","MEDGEN:1684771","UMLS:C5231478"],"synonyms":[{"name":"SEMDIST","type":"related"},{"name":"SPONDYLOEPIMETAPHYSEAL DYSPLASIA, ISIDOR-TOUTAIN TYPE","type":"related"}],"termid":"MONDO:0032885","terms_by_termid":{"MONDO:0032885":null},"xrefs":{"Monarch":{"xref_id":"0032885"}}}


id: PBO:0075481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily C member 1","termid":"PBO:0075481"}


id: GO:0008878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucose 1-phosphate + ATP = ADP-glucose + diphosphate.","definition_xrefs":["EC:2.7.7.27","RHEA:12120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016779"],"is_obsolete":false,"name":"glucose-1-phosphate adenylyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00948","MetaCyc:GLUC1PADENYLTRANS-RXN"],"synonyms":[{"name":"ADGase activity","type":"exact"},{"name":"ADP glucose pyrophosphorylase activity","type":"related"},{"name":"ADP-glucose diphosphorylase activity","type":"related"},{"name":"ADP-glucose pyrophosphorylase activity","type":"related"},{"name":"ADP-glucose synthase activity","type":"related"},{"name":"ADP-glucose synthetase activity","type":"related"},{"name":"ADP:alpha-D-glucose-1-phosphate adenylyltransferase activity","type":"related"},{"name":"ADPG pyrophosphorylase activity","type":"exact"},{"name":"ATP:alpha-D-glucose-1-phosphate adenylyltransferase activity","type":"related"},{"name":"ATP:alpha-glucose-1-phosphate adenylyl transferase activity","type":"exact"},{"name":"adenosine diphosphate glucose pyrophosphorylase activity","type":"related"},{"name":"adenosine diphosphoglucose pyrophosphorylase activity","type":"related"},{"name":"glucose 1-phosphate adenylyltransferase activity","type":"related"}],"termid":"GO:0008878"}


id: MOD:00895
data:
  {"annotated_genes":["SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[82484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00226"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a compound containing a flavin adenine dinucleotide (FAD) group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavin modified residue","termid":"MOD:00697"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01671":null},"genotype_count":0,"is_obsolete":false,"name":"FAD modified residue","references_by_uniquename":{"PMID:36408920":null},"termid":"MOD:00895","terms_by_termid":{"MOD:00226":null}}


id: GO:1901664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of NAD+ ADP-ribosyltransferase activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of NAD+ ADP-ribosyltransferase activity (obsolete GO:1901664)","synonyms":[{"name":"regulation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"regulation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"regulation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"regulation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"regulation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"regulation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"regulation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"}],"termid":"GO:1901664"}


id: PBO:0078050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 40","termid":"PBO:0078050"}


id: PBO:0083823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the Dam1 complex (aka DASH complex); cooperates with Dam1p and Pse1p to connect the DASH complex with microtubules (MT); couples kinetochores to the force produced by MT depolymerization thereby aiding in chromosome segregation; is transferred to the kinetochore prior to mitosis","termid":"PBO:0083823"}


id: MONDO:1010799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cutis laxa that occurs in sika deer.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutis laxa, non-human animal","termid":"MONDO:1010155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutis laxa, sika deer","secondary_identifiers":["OMIA:002404-9863"],"termid":"MONDO:1010799","xrefs":{"Monarch":{"xref_id":"1010799"}}}


id: PATO:0000489
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000489 vigorous response (obsolete PATO:0000489)","termid":"PATO:0000489"}


id: MONDO:0000931
data:
  {"annotated_genes":["SJAG_02748","SJAG_01419"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86852,89121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011962"}]},"cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the endometrium. Representative examples include endometritis, endometrial hyperplasia, and endometrial carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01419":null,"SJAG_02748":null},"genotype_count":0,"is_obsolete":false,"name":"endometrial disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0151622","SCTID:418632009","NCIT:C3504","DOID:1005","MEDGEN:57473"],"synonyms":[{"name":"disease of endometrium","type":"exact"},{"name":"disease or disorder of endometrium","type":"exact"},{"name":"disorder of endometrium","type":"exact"},{"name":"endometrial disorder","type":"exact"},{"name":"endometrium disease","type":"exact"},{"name":"endometrium disease or disorder","type":"exact"}],"termid":"MONDO:0000931","terms_by_termid":{"MONDO:0011962":null},"xrefs":{"Monarch":{"xref_id":"0000931"}}}


id: GO:0016200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuronal cell in a multicellular organism recognizes chemoattractant signals from, and grows towards, potential targets.","definition_xrefs":["ISBN:0878932437","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive chemotaxis","termid":"GO:0050918"},{"relation_name":"part_of","term_name":"synaptic target recognition","termid":"GO:0008039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synaptic target attraction","termid":"GO:0016200"}


id: PBO:0082280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Anti-silencing protein; causes derepression of silent loci when overexpressed","termid":"PBO:0082280"}


id: PBO:0000298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA R52","termid":"PBO:0000298"}


id: PR:Q9UT30
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- brr6 gene.","definition_xrefs":["UniProtKB:Q9UT30","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleus export protein brr6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8F11.06","synonyms":[{"name":"Spom972h-brr6","type":"exact"}],"termid":"PR:Q9UT30"}


id: MOD:01793
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-carboxamidomethyl-L-cysteine sulfoxide.","definition_xrefs":["PubMed:18688235","PubMed:18306178","PubMed:17689096","PubMed:11212008"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"S-carboxamidomethyl-L-cysteine","termid":"MOD:01060"},{"relation_name":"is_a","term_name":"iodoacetamide derivatized residue","termid":"MOD:00397"},{"relation_name":"is_a","term_name":"sulfur oxygenated L-cysteine","termid":"MOD:00708"},{"relation_name":"is_a","term_name":"sulfur monooxygenated residue","termid":"MOD:01854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-carboxamidomethyl-L-cysteine sulfoxide","synonyms":[{"name":"CamCO","type":"exact"},{"name":"S-carbamoylmethyl-L-cysteine sulfoxide","type":"exact"}],"termid":"MOD:01793"}


id: GO:0010403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pectic arabinogalactan I, an alpha-(1,4)-linked D-galactopyranose backbone that is substituted with alpha-l-Araf residues via the O-3 of the D-galactose residues. Arabinogalactan I can be found as a side chain of rhamnogalacturonan I.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnogalacturonan I side chain metabolic process","termid":"GO:0010400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0005975"],"is_obsolete":false,"name":"pectic arabinogalactan I metabolic process","synonyms":[{"name":"pectic arabinogalactan I metabolism","type":"exact"}],"termid":"GO:0010403"}


id: PBO:0075662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin beta, non-erythrocytic 2","termid":"PBO:0075662"}


id: MONDO:0006700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the optic choroid.","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular cancer","termid":"MONDO:0002095"},{"relation_name":"is_a","term_name":"uveal cancer","termid":"MONDO:0002659"},{"relation_name":"is_a","term_name":"choroid neoplasm","termid":"MONDO:0021258"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"choroid cancer","secondary_identifiers":["DOID:12759","ICD9:190.6","MEDGEN:57794","SCTID:363466008","MedDRA:10057405","MESH:D002830","UMLS:C0153630","NCIT:C3566"],"synonyms":[{"name":"cancer of optic choroid","type":"exact"},{"name":"choroid neoplasm","type":"broad"},{"name":"choroidal tumor","type":"broad"},{"name":"choroidal tumour","type":"broad"},{"name":"malignant choroid neoplasm","type":"exact"},{"name":"malignant choroid tumor","type":"exact"},{"name":"malignant choroid tumour","type":"exact"},{"name":"malignant neoplasm of choroid","type":"exact"},{"name":"malignant neoplasm of optic choroid","type":"exact"},{"name":"malignant neoplasm of the choroid","type":"exact"},{"name":"malignant optic choroid neoplasm","type":"exact"},{"name":"malignant tumor of choroid","type":"exact"},{"name":"malignant tumor of the choroid","type":"exact"},{"name":"malignant tumour of choroid","type":"exact"},{"name":"malignant tumour of the choroid","type":"exact"},{"name":"optic choroid cancer","type":"exact"}],"termid":"MONDO:0006700","xrefs":{"Monarch":{"xref_id":"0006700"}}}


id: MONDO:0003277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that affects the ear. Representative examples include ceruminous adenocarcinoma and squamous cell carcinoma of the external ear and adenocarcinoma of the middle ear.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"auditory system cancer","termid":"MONDO:0004532"},{"relation_name":"is_a","term_name":"sensory system cancer","termid":"MONDO:0000649"},{"relation_name":"is_a","term_name":"head and neck cancer","termid":"MONDO:0005627"},{"relation_name":"is_a","term_name":"ear neoplasm","termid":"MONDO:0021233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant ear neoplasm","secondary_identifiers":["MEDGEN:418247","NCIT:C9337","UMLS:C2350059","SCTID:443648003","MESH:D004428","DOID:5101"],"synonyms":[{"name":"auricular cancer","type":"related"},{"name":"cancer of ear","type":"exact"},{"name":"ear cancer","type":"exact"},{"name":"malignant Ear neoplasm","type":"exact"},{"name":"malignant Ear tumor","type":"exact"},{"name":"malignant Ear tumour","type":"exact"},{"name":"malignant ear neoplasm","type":"exact"},{"name":"malignant neoplasm of Ear","type":"exact"},{"name":"malignant neoplasm of ear","type":"exact"},{"name":"malignant neoplasm of the Ear","type":"exact"},{"name":"malignant tumor of Ear","type":"exact"},{"name":"malignant tumor of ear","type":"exact"},{"name":"malignant tumor of the Ear","type":"exact"},{"name":"malignant tumour of Ear","type":"exact"},{"name":"malignant tumour of ear","type":"exact"},{"name":"malignant tumour of the Ear","type":"exact"}],"termid":"MONDO:0003277","xrefs":{"Monarch":{"xref_id":"0003277"}}}


id: PBO:0088063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-protein ligase subunit of the CCR4-NOT complex; with Ubc4p, ubiquitinates nascent polypeptide-associated complex subunits and histone demethyase Jhd2p; CCR4-NOT has roles in transcription regulation, mRNA degradation, and post-transcriptional modifications; regulates levels of DNA Polymerase-{alpha} to promote efficient and accurate DNA replication","termid":"PBO:0088063"}


id: PBO:0065500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis susceptibility 1 candidate 2","termid":"PBO:0065500"}


id: FYPO:0007969
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form mitotic spindle microtubules that are longer than normal, extend beyond the spindle pole body and are present transiently. The protruding spindle microtubules are surrounded by an extension of the nuclear envelope.","definition_xrefs":["PMID:26031557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long mitotic spindle microtubules protruding beyond spindle pole body","termid":"FYPO:0003787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0001320","FYPO:0005447","FYPO:0002403","FYPO:0000120"],"is_obsolete":false,"name":"short-lived long mitotic spindle microtubules protruding beyond spindle pole body","secondary_identifiers":["PomBase:mlr"],"termid":"FYPO:0007969"}


id: PBO:0051978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jade family PHD finger 1","termid":"PBO:0051978"}


id: PBO:0086199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion; expression may be cell cycle-regulated","termid":"PBO:0086199"}


id: PBO:0059996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 16","termid":"PBO:0059996"}


id: GO:0018632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: p-nitrophenol + O2 + NADPH = H2O + NADP+ + nitrite + p-benzoquinone.","definition_xrefs":["RHEA:34327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-nitrophenol 4-monooxygenase activity","secondary_identifiers":["EC:1.14.13.167","MetaCyc:RXN-8739","UM-BBD_reactionID:r0226"],"termid":"GO:0018632"}


id: GO:0071560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a transforming growth factor beta stimulus.","definition_xrefs":["GOC:ecd","PMID:15451575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"},{"relation_name":"is_a","term_name":"response to transforming growth factor beta","termid":"GO:0071559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to transforming growth factor beta stimulus","synonyms":[{"name":"cellular response to TGF-beta stimulus","type":"exact"},{"name":"cellular response to TGFbeta stimulus","type":"exact"}],"termid":"GO:0071560"}


id: GO:0001070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A transcription regulator activity that modulates the transcription of specific gene sets via selective and non-covalent binding to a specific RNA sequence. This function is known to occur in phages and viruses, for example the lambda N and the HIV tat proteins are necessary to allow RNA polymerase to read through terminator sequences.","definition_xrefs":["PMID:1756726","GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator activity","termid":"GO:0140110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140110","GO:0003674"],"is_obsolete":false,"name":"RNA-binding transcription regulator activity","synonyms":[{"name":"RNA binding transcription factor activity","type":"related"},{"name":"RNA binding transcription regulator activity","type":"exact"}],"termid":"GO:0001070"}


id: PBO:0081507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 414","termid":"PBO:0081507"}


id: PBO:0017044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug110","termid":"PBO:0017044"}


id: PATO:0001828
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual or a population by virtue of having internal reproductive organs of male and external sexual characteristics of female.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohermaphrodite","termid":"PATO:0001827"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male pseudohermaphrodite","termid":"PATO:0001828"}


id: GO:1900830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of D-tyrosine.","definition_xrefs":["GOC:TermGenie","PMID:10766779"],"gene_count":0,"genotype_count":0,"name":"obsolete D-tyrosine biosynthetic process (obsolete GO:1900830)","synonyms":[{"name":"D-tyrosine anabolism","type":"exact"},{"name":"D-tyrosine biosynthesis","type":"exact"},{"name":"D-tyrosine formation","type":"exact"},{"name":"D-tyrosine synthesis","type":"exact"}],"termid":"GO:1900830"}


id: GO:0009734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated by the binding of the plant hormone auxin to a receptor, and ending with modulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:16990790","PMID:18647826","GOC:mah","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"part_of","term_name":"cellular response to auxin stimulus","termid":"GO:0071365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"auxin-activated signaling pathway","synonyms":[{"name":"auxin mediated signaling pathway","type":"related"},{"name":"auxin mediated signalling","type":"exact"},{"name":"auxin signal transduction","type":"exact"},{"name":"auxin signaling","type":"exact"},{"name":"auxin-regulated transcription","type":"related"}],"termid":"GO:0009734"}


id: MONDO:0001760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Injury to the cornea secondary to ultraviolet light.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratitis","termid":"MONDO:0003085"},{"relation_name":"is_a","term_name":"radiation-induced disorder","termid":"MONDO:0043459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"photokeratitis","secondary_identifiers":["MEDGEN:509774","ICD9:370.24","NCIT:C118750","SCTID:1714005","UMLS:C0155078","icd11.foundation:1566990302","DOID:13626"],"synonyms":[{"name":"ultraviolet keratitis","type":"exact"}],"termid":"MONDO:0001760","xrefs":{"Monarch":{"xref_id":"0001760"}}}


id: PBO:0084860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; two mitochondrial ribosomal proteins, YmL14 and YmL24, have been assigned to the same gene","termid":"PBO:0084860"}


id: PBO:0091117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper-binding protein of the mitochondrial intermembrane space Cmc1","termid":"PBO:0091117"}


id: GO:0080181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the formation of branches in lateral roots.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of a branching structure","termid":"GO:0001763"},{"relation_name":"part_of","term_name":"lateral root morphogenesis","termid":"GO:0010102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral root branching","termid":"GO:0080181"}


id: PBO:0044218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic thiouridylase subunit 1","termid":"PBO:0044218"}


id: PBO:0071213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 54","termid":"PBO:0071213"}


id: PBO:0040247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 4B cysteine peptidase","termid":"PBO:0040247"}


id: PBO:0087629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Dcp1p-Dcp2p decapping enzyme complex; decapping complex removes the 5' cap structure from mRNAs prior to their degradation; enhances the activity of catalytic subunit Dcp2p; regulated by DEAD box protein Dhh1p; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0087629"}


id: PBO:0015686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hikeshi protein, Opi10 (predicted)","termid":"PBO:0015686"}


id: PBO:0084921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Monoacylglycerol and triacylglycerol lipase; MAG lipase with preference for palmitoyl-MAG; TAG lipase involved in TAG catabolism; minor role in medium-chain fatty acid ethyl ester biosynthesis; contains an alpha/beta hydrolase domain and a typical lipase motif (GXSXG); similar to acyltransferases, Eeb1p, Eht1p, and human ABHD1","termid":"PBO:0084921"}


id: GO:0061358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the controlled release of a Wnt protein from a cell.","definition_xrefs":["GOC:bf","PMID:19223472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"is_a","term_name":"negative regulation of signaling","termid":"GO:0023057"},{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"regulation of Wnt protein secretion","termid":"GO:0061356"},{"relation_name":"negatively_regulates","term_name":"Wnt protein secretion","termid":"GO:0061355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Wnt protein secretion","termid":"GO:0061358"}


id: MONDO:0019480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic proliferation of Langerhans cells with overtly malignant cytologic features. It can be considered a higher grade variant of Langerhans cell histiocytosis (LCH) and it can present de novo or progress from antecedent LCH. (WHO, 2001)","definition_xrefs":["NCIT:C6921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic cell sarcoma","termid":"MONDO:0004380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"Langerhans cell sarcoma","secondary_identifiers":["GARD:10491","EFO:0007336","ICDO:9756/3","MEDGEN:266041","Orphanet:86897","icd11.foundation:588958190","icd11.foundation:933337476","NANDO:2200036","ONCOTREE:LCS","MESH:D054752","UMLS:C1260327","DOID:7146","SCTID:724649000"],"synonyms":[{"name":"LCS","type":"related"},{"name":"Langerhans cell sarcoma","type":"exact"},{"name":"malignant Langerhans cell sarcoma","type":"related"},{"name":"sarcoma of Langerhans cell","type":"exact"}],"termid":"MONDO:0019480","xrefs":{"Monarch":{"xref_id":"0019480"}}}


id: PBO:0012846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp46","termid":"PBO:0012846"}


id: MONDO:0019634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial nasal acilia is a rare genetic otorhinolaryngologic disease characterized by respiratory morbidity due to lack of cilia on the respiratory tract epithelial cells. The disease manifests from birth with respiratory distress, neonatal pneumonia, dyspnea, lobar atelectasis and bronchiectasis. Recurrent infections of the upper and lower respiratory tract, chronic humid coughing, and chronic sinusitis, otitis and rhinitis are typical lifelong presenting conditions.","definition_xrefs":["Orphanet:922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial nasal acilia","secondary_identifiers":["SCTID:763532008","UMLS:C4706505","MEDGEN:1647725","GARD:2254"],"termid":"MONDO:0019634","xrefs":{"Monarch":{"xref_id":"0019634"}}}


id: MONDO:0011036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Porencephaly-cerebellar hypoplasia-internal malformations syndrome is rare central nervous system malformation syndrome characterized by bilateral porencephaly, absence of the septum pellucidum and cerebellar hypoplasia with absent vermis. Additionally, dysmorphic facial features (hypertelorism, epicanthic folds, high arched palate, prominent metopic suture), macrocephaly, corneal clouding, situs inversus, tetralogy of Fallot, atrial septal defects and/or seizures have been observed.","definition_xrefs":["Orphanet:2941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porencephaly-cerebellar hypoplasia-internal malformations syndrome","secondary_identifiers":["MEDGEN:331296","GARD:4437","SCTID:763821001","MESH:C536336","UMLS:C1832472","OMIM:601322"],"synonyms":[{"name":"Bonnemann Meinecke syndrome","type":"related"},{"name":"Bonnemann-Meinecke syndrome","type":"exact"},{"name":"porencephaly cerebellar hypoplasia internal malformations","type":"related"},{"name":"porencephaly, cerebellar hypoplasia, and internal malformations","type":"related"}],"termid":"MONDO:0011036","xrefs":{"Monarch":{"xref_id":"0011036"}}}


id: PBO:0031082
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-DNA_metabolism_phenotype","termid":"PBO:0031082"}


id: PBO:0069439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 704, pseudogene","termid":"PBO:0069439"}


id: PBO:0061431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group H member 4","termid":"PBO:0061431"}


id: PBO:0001257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Hsr1","termid":"PBO:0001257"}


id: PBO:0113031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the oligosaccharyltransferase (OST) complex; the OST complex catalyzes asparagine-linked glycosylation of newly synthesized proteins in the ER lumen; involved in recognition of N-acetylglucosamine; forms a subcomplex with Ost3p and Ost4p","termid":"PBO:0113031"}


id: PBO:0076040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 38","termid":"PBO:0076040"}


id: MONDO:0007146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete apnea, central sleep (obsolete MONDO:0007146)","termid":"MONDO:0007146","xrefs":{"Monarch":{"xref_id":"0007146"}}}


id: PBO:0043923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CROCC pseudogene 2","termid":"PBO:0043923"}


id: MONDO:0000709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Crohn disease involving a pathogenic inflammatory response in the ileum.","definition_xrefs":["MONDO:patterns/specific_inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small bowel Crohn disease","termid":"MONDO:0005539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"Crohn ileitis","secondary_identifiers":["UMLS:C0267380","NCIT:C35329","MedDRA:10021312","MEDGEN:82754","CSP:1248-5305","ICD9:558.9","MESH:D007079","DOID:0060189","SCTID:52457000","NDFRT:N0000001662"],"synonyms":[{"name":"Crohn's ileitis","type":"exact"},{"name":"ileitis","type":"related"}],"termid":"MONDO:0000709","xrefs":{"Monarch":{"xref_id":"0000709"}}}


id: GO:0004251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete X-Pro dipeptidase activity (obsolete GO:0004251)","synonyms":[{"name":"X-Pro dipeptidase activity","type":"exact"},{"name":"Xaa-Pro dipeptidase activity","type":"exact"}],"termid":"GO:0004251"}


id: GO:0038054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with estrogen and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:signaling","PMID:17379646","PMID:20960099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled estrogen receptor activity","synonyms":[{"name":"G-protein coupled estrogen receptor activity","type":"exact"},{"name":"estrogen receptor activity","type":"broad"}],"termid":"GO:0038054"}


id: MONDO:0021124
data:
  {"annotated_genes":["SJAG_00377","SJAG_03051","SJAG_02339","SJAG_03720","SJAG_04114","SJAG_03418","SJAG_04738","SJAG_02690","SJAG_02294","SJAG_04950","SJAG_00103","SJAG_03698","SJAG_04703","SJAG_02954","SJAG_04148","SJAG_02643"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[87787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009258"},{"annotations":[88799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[87461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[88227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"},{"annotations":[89058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013972"},{"annotations":[87832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014126"},{"annotations":[86868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0976232"},{"annotations":[87447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014843"},{"annotations":[88245,88244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054862"},{"annotations":[87532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030870"},{"annotations":[87941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958035"},{"annotations":[88861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010350"},{"annotations":[88434,88433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014321"}]},"cv_name":"mondo","definition":"Diminished or absent ability of a female to achieve conception.","definition_xrefs":["MESH:D007247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"infertility disorder","termid":"MONDO:0005047"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00103":null,"SJAG_00377":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02643":null,"SJAG_02690":null,"SJAG_02954":null,"SJAG_03051":null,"SJAG_03418":null,"SJAG_03698":null,"SJAG_03720":null,"SJAG_04114":null,"SJAG_04148":null,"SJAG_04703":null,"SJAG_04738":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"female infertility","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0021361","MEDGEN:5795","ICD10CM:N97","ICD9:628.9","EFO:0008560","ICD9:628.8","SCTID:6738008","icd11.foundation:1237004558"],"synonyms":[{"name":"female infertility","type":"exact"},{"name":"female reproductive system infertility","type":"exact"},{"name":"female reproductive system infertility disorder","type":"exact"},{"name":"female sterility","type":"related"},{"name":"female sub-fertility","type":"related"},{"name":"female subfertility","type":"related"},{"name":"infertility disorder of female reproductive system","type":"exact"},{"name":"postpartum sterility","type":"related"},{"name":"sterility, female","type":"related"},{"name":"sterility, postpartum","type":"related"},{"name":"sub fertility, female","type":"related"},{"name":"sub-fertility, female","type":"related"},{"name":"subfertility, female","type":"related"}],"termid":"MONDO:0021124","terms_by_termid":{"MONDO:0008840":null,"MONDO:0009258":null,"MONDO:0010350":null,"MONDO:0013689":null,"MONDO:0013972":null,"MONDO:0014126":null,"MONDO:0014321":null,"MONDO:0014843":null,"MONDO:0030736":null,"MONDO:0030870":null,"MONDO:0054850":null,"MONDO:0054862":null,"MONDO:0958035":null,"MONDO:0976232":null},"xrefs":{"Monarch":{"xref_id":"0021124"}}}


id: PBO:0066766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 64","termid":"PBO:0066766"}


id: GO:0042052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and arrangement of a rhabdomere within a cell. The rhabdomere is the organelle on the apical surface of a photoreceptor cell that contains the visual pigments.","definition_xrefs":["PMID:3076112","PMID:3937883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"},{"relation_name":"part_of","term_name":"compound eye photoreceptor development","termid":"GO:0042051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhabdomere development","synonyms":[{"name":"rhabdomere organization","type":"exact"}],"termid":"GO:0042052"}


id: PBO:0001991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR91","termid":"PBO:0001991"}


id: MOD:00722
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom of an L-glutamine residue with one methyl group.","definition_xrefs":["OMSSA:14","Unimod:34#Q"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated glutamine","termid":"MOD:00659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated L-glutamine","synonyms":[{"name":"Me1Gln","type":"exact"},{"name":"methylq","type":"exact"}],"termid":"MOD:00722"}


id: PBO:0074303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLX1B-SULT1A4 readthrough (NMD candidate)","termid":"PBO:0074303"}


id: PBO:0048091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 12","termid":"PBO:0048091"}


id: GO:0072635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-31 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","GOC:BHF","PMID:30328794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-31 production","secondary_identifiers":["GO:0072636"],"synonyms":[{"name":"IL-31 production","type":"exact"},{"name":"interleukin-31 secretion","type":"narrow"}],"termid":"GO:0072635"}


id: PBO:0052949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinase suppressor of ras 1","termid":"PBO:0052949"}


id: GO:0008931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete murein DD-endopeptidase activity (obsolete GO:0008931)","synonyms":[{"name":"murein DD-endopeptidase activity","type":"exact"}],"termid":"GO:0008931"}


id: GO:0090132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the population of cells that make up an epithelium undergo directed movement.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue migration","termid":"GO:0090130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelium migration","termid":"GO:0090132"}


id: PBO:0054916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2330","termid":"PBO:0054916"}


id: GO:0016458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process carried out at the cellular level that results in either long-term transcriptional repression via action on chromatin structure or RNA mediated, post-transcriptional repression of gene expression.","definition_xrefs":["GOC:dos","GOC:tb","GOC:dph","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete gene silencing (obsolete GO:0016458)","secondary_identifiers":["Wikipedia:Gene_silencing"],"termid":"GO:0016458"}


id: PR:O13898
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ogm1 gene.","definition_xrefs":["UniProtKB:O13898","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate-mannose--protein mannosyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.07c","synonyms":[{"name":"Spom972h-ogm1","type":"exact"}],"termid":"PR:O13898"}


id: GO:0006589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of octopamine, 1-(p-hydroxyphenyl)-2-aminoethanol. The D enantiomer is about one-tenth as active as norepinephrine and is found in the salivary glands of Octopus and Eledone species.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biogenic amine biosynthetic process","termid":"GO:0042401"},{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"octopamine metabolic process","termid":"GO:0046333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"octopamine biosynthetic process","synonyms":[{"name":"octopamine anabolism","type":"exact"},{"name":"octopamine biosynthesis","type":"exact"},{"name":"octopamine formation","type":"exact"},{"name":"octopamine synthesis","type":"exact"}],"termid":"GO:0006589"}


id: GO:1901082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of relaxation of smooth muscle.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of relaxation of muscle","termid":"GO:1901079"},{"relation_name":"is_a","term_name":"regulation of relaxation of smooth muscle","termid":"GO:1901080"},{"relation_name":"positively_regulates","term_name":"relaxation of smooth muscle","termid":"GO:0044557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of relaxation of smooth muscle","synonyms":[{"name":"activation of relaxation of smooth muscle","type":"narrow"},{"name":"activation of smooth muscle relaxation","type":"exact"},{"name":"positive regulation of smooth muscle relaxation","type":"exact"},{"name":"up regulation of relaxation of smooth muscle","type":"exact"},{"name":"up regulation of smooth muscle relaxation","type":"exact"},{"name":"up-regulation of relaxation of smooth muscle","type":"exact"},{"name":"up-regulation of smooth muscle relaxation","type":"exact"},{"name":"upregulation of relaxation of smooth muscle","type":"exact"},{"name":"upregulation of smooth muscle relaxation","type":"exact"}],"termid":"GO:1901082"}


id: MONDO:0859306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental delay with variable intellectual disability and dysmorphic facies","secondary_identifiers":["MEDGEN:1824015","OMIM:620098","UMLS:C5774242"],"termid":"MONDO:0859306","xrefs":{"Monarch":{"xref_id":"0859306"}}}


id: GO:0047660
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-amidino-L-aspartate + H2O = L-aspartate + urea.","definition_xrefs":["RHEA:14849","EC:3.5.3.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"amidinoaspartase activity","secondary_identifiers":["KEGG_REACTION:R00777","MetaCyc:AMIDINOASPARTASE-RXN"],"synonyms":[{"name":"N-amidino-L-aspartate amidinohydrolase activity","type":"related"},{"name":"amidinoaspartic amidinohydrolase activity","type":"related"}],"termid":"GO:0047660"}


id: MONDO:0009309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any chronic granulomatous disease in which the cause of the disease is a mutation in the NCF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic granulomatous disease","termid":"MONDO:0018305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-positive, type 1","secondary_identifiers":["GARD:15176","DOID:0070192","MESH:C565532","NANDO:2201281","OMIM:233700","MEDGEN:341102","UMLS:C1856251"],"synonyms":[{"name":"CDG1","type":"related"},{"name":"CGD, autosomal recessive cytochrome B-positive, type 1","type":"related"},{"name":"NCF1 chronic granulomatous disease","type":"exact"},{"name":"Ncf1, deficiency of","type":"related"},{"name":"Soc2, deficiency of","type":"related"},{"name":"chronic granulomatous disease 1, autosomal recessive","type":"exact"},{"name":"chronic granulomatous disease caused by mutation in NCF1","type":"exact"},{"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-POSITIVE, type I","type":"related"},{"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-positive, type 1","type":"exact"},{"name":"granulomatous disease, chronic, due to Ncf1 deficiency","type":"related"},{"name":"neutrophil cytosol Factor 1, deficiency of","type":"related"},{"name":"p47-PHOX, deficiency of","type":"related"},{"name":"soluble oxidase component II, deficiency of","type":"related"}],"termid":"MONDO:0009309","xrefs":{"Monarch":{"xref_id":"0009309"}}}


id: MONDO:0006363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cystic mesothelioma that arises from the peritoneum and usually affects young to middle aged females. Grossly, it presents as a large multiloculated tumor mass, usually in the pelvic peritoneum. Histologically it is characterized by the presence of multiple cysts that are lined by one or more layers of mesothelial cells that do not show atypia. Patients usually present with abdominal or pelvic mass and pain. The clinical course is indolent. The tumor may recur, but transformation to diffuse malignant mesothelioma is rare.","definition_xrefs":["NCIT:C6536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peritoneal mesothelioma","termid":"MONDO:0006362"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peritoneal multicystic mesothelioma","secondary_identifiers":["MEDGEN:233198","Orphanet:168816","UMLS:C1334818","GARD:10777","SCTID:716650003","EFO:1000468"],"synonyms":[{"name":"BMPM","type":"related"},{"name":"benign cystic peritoneal mesothelioma","type":"related"},{"name":"benign multicystic peritoneal mesothelioma","type":"narrow"},{"name":"multicystic mesothelioma","type":"exact"},{"name":"multicystic mesothelioma of peritoneum","type":"exact"},{"name":"multicystic mesothelioma of the peritoneum","type":"exact"},{"name":"multilocular peritoneal cysts","type":"related"},{"name":"multilocular peritoneal inclusion cyst","type":"exact"},{"name":"multilocular peritoneal inclusion cysts","type":"related"},{"name":"peritoneal cystic mesothelioma","type":"exact"},{"name":"peritoneal multicystic mesothelioma","type":"exact"}],"termid":"MONDO:0006363","xrefs":{"Monarch":{"xref_id":"0006363"}}}


id: MONDO:1011470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amyloidosis that occurs in ducks.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"amyloidosis, non-human animal","termid":"MONDO:1011415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloidosis, ducks","secondary_identifiers":["OMIA:000037-8835"],"termid":"MONDO:1011470","xrefs":{"Monarch":{"xref_id":"1011470"}}}


id: PBO:0064240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol specific phospholipase C X domain containing 3","termid":"PBO:0064240"}


id: PBO:0011443
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kelley-Seegmiller syndrome","termid":"PBO:0011443"}


id: PBO:0078789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 12-1","termid":"PBO:0078789"}


id: GO:0005559
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete ribozyme (obsolete GO:0005559)","synonyms":[{"name":"ribozyme","type":"exact"}],"termid":"GO:0005559"}


id: PBO:0083210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF RPL33A/YPL143W, a component of the large (60S) ribosomal subunit","termid":"PBO:0083210"}


id: PBO:0081644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 570","termid":"PBO:0081644"}


id: PBO:0064550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 12","termid":"PBO:0064550"}


id: FYPO:0000199
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A DNA recombination phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of long tract gene conversion is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased gene conversion during vegetative growth","termid":"FYPO:0005788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"increased long tract gene conversion","synonyms":[{"name":"DNA recombination defects, long tract gene conversion, increased","type":"exact"},{"name":"increased long tract gene conversion during mitotic cell cycle","type":"related"},{"name":"increased long tract gene conversion during vegetative growth","type":"exact"}],"termid":"FYPO:0000199"}


id: GO:0005342
data:
  {"annotated_genes":["SJAG_04984","SJAG_00522","SJAG_04718","SJAG_02029","SJAG_04295","SJAG_01924","SJAG_02779","SJAG_02780","SJAG_01872","SJAG_00232","SJAG_03503","SJAG_00626","SJAG_02140","SJAG_05325","SJAG_00699","SJAG_04588","SJAG_00671","SJAG_05175","SJAG_03400","SJAG_04593","SJAG_01505","SJAG_01406","SJAG_03899","SJAG_04637","SJAG_04905","SJAG_00276","SJAG_01960","SJAG_03644","SJAG_04725","SJAG_04706","SJAG_00543","SJAG_00275","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140485"},{"annotations":[80459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015123"},{"annotations":[114255,98476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015139"},{"annotations":[98477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000515"},{"annotations":[81005,73545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015225"},{"annotations":[89311,72630,81612,81782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046943"},{"annotations":[74305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071913"},{"annotations":[77208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033229"},{"annotations":[81008,73548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901604"},{"annotations":[75647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008517"},{"annotations":[94375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015128"},{"annotations":[79640,71826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015187"},{"annotations":[90277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034658"},{"annotations":[97928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034639"},{"annotations":[102283,80919,99267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061459"},{"annotations":[112004,104737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015182"},{"annotations":[80914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005313"},{"annotations":[99268,80912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005290"},{"annotations":[104738,112005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"},{"annotations":[80916,102284,104739,112006,99269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015189"},{"annotations":[109868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000064"},{"annotations":[102276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015193"},{"annotations":[80917,92490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015194"},{"annotations":[80913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005302"},{"annotations":[68909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015140"},{"annotations":[103589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[103590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901239"},{"annotations":[90278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015131"},{"annotations":[74226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015233"},{"annotations":[78385,95223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089721"},{"annotations":[78699,96281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050833"},{"annotations":[103592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"},{"annotations":[114256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005371"}]},"cv_name":"molecular_function","definition":"Enables the transfer of organic acids from one side of a membrane to the other. Organic acids are acidic compound containing carbon in covalent linkage.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00232":null,"SJAG_00275":null,"SJAG_00276":null,"SJAG_00522":null,"SJAG_00543":null,"SJAG_00626":null,"SJAG_00671":null,"SJAG_00699":null,"SJAG_01406":null,"SJAG_01505":null,"SJAG_01872":null,"SJAG_01924":null,"SJAG_01960":null,"SJAG_02029":null,"SJAG_02140":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03503":null,"SJAG_03644":null,"SJAG_03899":null,"SJAG_04295":null,"SJAG_04588":null,"SJAG_04593":null,"SJAG_04637":null,"SJAG_04706":null,"SJAG_04718":null,"SJAG_04725":null,"SJAG_04905":null,"SJAG_04984":null,"SJAG_05175":null,"SJAG_05325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"organic acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005342","terms_by_termid":{"GO:0000064":null,"GO:0000515":null,"GO:0005290":null,"GO:0005302":null,"GO:0005313":null,"GO:0005371":null,"GO:0008517":null,"GO:0015123":null,"GO:0015128":null,"GO:0015131":null,"GO:0015139":null,"GO:0015140":null,"GO:0015182":null,"GO:0015187":null,"GO:0015188":null,"GO:0015189":null,"GO:0015193":null,"GO:0015194":null,"GO:0015225":null,"GO:0015233":null,"GO:0015366":null,"GO:0033229":null,"GO:0034639":null,"GO:0034658":null,"GO:0046943":null,"GO:0050833":null,"GO:0061459":null,"GO:0071913":null,"GO:0089721":null,"GO:0097434":null,"GO:0140485":null,"GO:1901239":null,"GO:1901604":null}}


id: MONDO:0007501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preauricular fistulae, congenital","secondary_identifiers":["MEDGEN:154283","OMIM:128700","UMLS:C0546969","MESH:C563015"],"synonyms":[{"name":"Ear pits","type":"related"},{"name":"Pafc","type":"related"},{"name":"preauricular fistulae, congenital","type":"exact"}],"termid":"MONDO:0007501","xrefs":{"Monarch":{"xref_id":"0007501"}}}


id: GO:0033757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose + acceptor = 3-dehydro-alpha-D-glucosyl-beta-D-fructofuranoside + reduced acceptor.","definition_xrefs":["EC:1.1.99.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glucoside 3-dehydrogenase activity","secondary_identifiers":["Wikipedia:Glucoside_3-dehydrogenase","MetaCyc:GLUCOSIDE-3-DEHYDROGENASE-RXN","RHEA:16589"],"synonyms":[{"name":"D-aldohexopyranoside dehydrogenase","type":"related"},{"name":"D-aldohexoside:(acceptor) 3-oxidoreductase","type":"related"},{"name":"D-aldohexoside:acceptor 3-oxidoreductase","type":"related"},{"name":"D-aldohexoside:cytochrome c oxidoreductase","type":"related"},{"name":"hexopyranoside-cytochrome c oxidoreductase","type":"related"}],"termid":"GO:0033757"}


id: PATO:0001512
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pattern inhering in a surface by virtue of the bearer's being marked by the presence of dots, punctures, points or pits.","definition_xrefs":["medical-dictionary:medical-dictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"irregular spatial pattern","termid":"PATO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"punctate","synonyms":[{"name":"dotted","type":"related"},{"name":"spotted","type":"related"},{"name":"stippled","type":"related"}],"termid":"PATO:0001512"}


id: GO:1990653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a monounsaturated fatty acid. A monounsaturated fatty acid has one double bond in the fatty acid chain with all of the remainder carbon atoms being single-bonded, as opposed to polyunsaturated fatty acids.","definition_xrefs":["GOC:hjd","PMID:16443825"],"gene_count":0,"genotype_count":0,"name":"obsolete monounsaturated fatty acid biosynthetic process (obsolete GO:1990653)","termid":"GO:1990653"}


id: GO:0019308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dTDP-mannose, a substance composed of mannose in glycosidic linkage with deoxyribosylthymine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"dTDP-mannose metabolic process","termid":"GO:0046371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"dTDP-mannose biosynthetic process","synonyms":[{"name":"dTDP-mannose anabolism","type":"exact"},{"name":"dTDP-mannose biosynthesis","type":"exact"},{"name":"dTDP-mannose formation","type":"exact"},{"name":"dTDP-mannose synthesis","type":"exact"}],"termid":"GO:0019308"}


id: PBO:0051051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 2-8","termid":"PBO:0051051"}


id: MONDO:0010585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked form of ectodermal dysplasia which results from mutations of the gene encoding ectodysplasin.","definition_xrefs":["MESH:D053358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"hypohidrotic ectodermal dysplasia","termid":"MONDO:0016535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"X-linked hypohidrotic ectodermal dysplasia","secondary_identifiers":["OMIM:305100","GARD:10427","MEDGEN:57890","DOID:0111664","UMLS:C0162359","Orphanet:181","icd11.foundation:941793098","SCTID:239007005"],"synonyms":[{"name":"CST syndrome","type":"related"},{"name":"Christ-Siemens-Touraine syndrome","type":"exact"},{"name":"Eda1","type":"related"},{"name":"X-linked anhidrotic ectodermal dysplasia","type":"exact"},{"name":"X-linked hypohidrotic ectodermal dysplasia","type":"exact"},{"name":"XHED","type":"exact"},{"name":"Xlhed","type":"related"},{"name":"anhidrotic ectodermal dysplasia X-linked","type":"related"},{"name":"ectodermal dysplasia 1","type":"related"},{"name":"ectodermal dysplasia 1, hypohidrotic, X-linked","type":"related"},{"name":"ectodermal dysplasia 1, hypohidrotic, X-linked, X-linked recessive","type":"exact"},{"name":"ectodermal dysplasia 1, hypohidrotic/hair/Tooth type, X-linked","type":"related"},{"name":"ectodermal dysplasia, anhidrotic, X-linked","type":"related"},{"name":"ectodermal dysplasia, hypohidrotic, 1","type":"related"},{"name":"hypohidrotic ectodermal dysplasia X-linked","type":"related"},{"name":"hypohidrotic ectodermal dysplasia, X-linked","type":"exact"}],"termid":"MONDO:0010585","xrefs":{"Monarch":{"xref_id":"0010585"}}}


id: PBO:0091968
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"III:g.1774235_1774236insGATC","termid":"PBO:0091968"}


id: FYPO:0006094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of actin filament bundles is abnormal.","definition_xrefs":["GO:0061572","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal actin filament bundle organization","termid":"FYPO:0005979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0004803","FYPO:0001985"],"is_obsolete":false,"name":"abnormal actin filament bundle assembly","synonyms":[{"name":"abnormal actin bundling","type":"exact"},{"name":"abnormal actin filament bundle assembly during mitotic cell cycle","type":"related"},{"name":"abnormal actin filament bundle assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0006094"}


id: PBO:0060681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-myc downstream regulated 1","termid":"PBO:0060681"}


id: MONDO:1010991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus, non-human animal","termid":"MONDO:1010233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, cattle","secondary_identifiers":["OMIA:000487-9913"],"termid":"MONDO:1010991","xrefs":{"Monarch":{"xref_id":"1010991"}}}


id: CHEBI:63041
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A manganese coordination entity in which manganese(II) is coordinated to two chloride ions.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"manganese(II) chloride","termid":"CHEBI:63041"}


id: MONDO:1012046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar cortical atrophy, non-human animal","termid":"MONDO:1011836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar cortical atrophy, domestic cat","secondary_identifiers":["OMIA:000177-9685"],"termid":"MONDO:1012046","xrefs":{"Monarch":{"xref_id":"1012046"}}}


id: GO:1900200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mesenchymal cell apoptotic process that is involved in metanephros development.","definition_xrefs":["GOC:mtg_apoptosis","GOC:yaf","GOC:mtg_kidney_jan10","GOC:TermGenie","PMID:17314325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell apoptotic process","termid":"GO:0097152"},{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell apoptotic process involved in metanephros development","synonyms":[{"name":"mesenchymal cell apoptosis involved in metanephros development","type":"narrow"}],"termid":"GO:1900200"}


id: MONDO:1012805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cerebellar ataxia that occurs in dogs due to a mutation in the SCN8A gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, dog","termid":"MONDO:1012957"},{"relation_name":"is_a","term_name":"hereditary cerebellar ataxia, non-human animal","termid":"MONDO:1012960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinocerebellar ataxia, SCN8A-related, dog","secondary_identifiers":["OMIA:002194-9615"],"synonyms":[{"name":"ataxia, spinocerebellar, SCN8A-related, dog","type":"exact"}],"termid":"MONDO:1012805","xrefs":{"Monarch":{"xref_id":"1012805"}}}


id: PBO:0063560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pelota mRNA surveillance and ribosome rescue factor","termid":"PBO:0063560"}


id: PR:O74763
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DDB1- and CUL4-associated factor 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03659","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C17D11.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.08","secondary_identifiers":["UniProtKB:O74763"],"synonyms":[{"name":"Spom972h-DCAF7","type":"exact"}],"termid":"PR:O74763"}


id: MONDO:0100604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary disease that encompasses the spectrum of clinical phenotypes resulting from loss of function of the TOR1AIP1 gene, including TOR1AIP1-related myopathy and TOR1AIP1-related multisystem disorder. Variability in the specific clinical features resulting from variants disrupting the function the TOR1AIP1 gene is thought to depend on the differential effects of variants on TOR1AIP1 transcript isoforms, for which there is evidence for tissue-specific expression and function.","definition_xrefs":["PMID:37108075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOR1AIP1-related nuclear envelopathy","termid":"MONDO:0100604","xrefs":{"Monarch":{"xref_id":"0100604"}}}


id: GO:0001112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the melting of the DNA hybrid of the core promoter region within the transcriptional closed complex of an RNA polymerase preinitiation complex (PIC) to produce an open complex where the DNA duplex around the transcription initiation site is unwound to form the transcription bubble.","definition_xrefs":["GOC:txnOH","PMID:18280161","PMID:15020047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex remodeling","termid":"GO:0001120"},{"relation_name":"part_of","term_name":"DNA-templated transcription initiation","termid":"GO:0006352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"DNA-templated transcription open complex formation","secondary_identifiers":["GO:0001127"],"synonyms":[{"name":"DNA-dependent transcriptional open complex formation","type":"exact"},{"name":"DNA-templated transcriptional open complex formation","type":"exact"},{"name":"promoter melting","type":"broad"},{"name":"transcription open complex formation at bacterial-type RNA polymerase promoter","type":"narrow"},{"name":"transcriptional open complex formation at bacterial-type RNA polymerase promoter","type":"narrow"}],"termid":"GO:0001112"}


id: GO:1905606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of presynapse assembly.","definition_xrefs":["GOC:TermGenie","GOC:PARL","PMID:25533483","GO_REF:0000058","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse assembly","termid":"GO:0051963"},{"relation_name":"is_a","term_name":"regulation of presynapse organization","termid":"GO:0099174"},{"relation_name":"regulates","term_name":"presynapse assembly","termid":"GO:0099054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of presynapse assembly","synonyms":[{"name":"regulation of presynapse biogenesis","type":"exact"},{"name":"regulation of presynaptic terminal assembly","type":"exact"}],"termid":"GO:1905606"}


id: GO:0039536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the RIG-I signaling pathway.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"is_a","term_name":"regulation of RIG-I signaling pathway","termid":"GO:0039535"},{"relation_name":"negatively_regulates","term_name":"RIG-I signaling pathway","termid":"GO:0039529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of RIG-I signaling pathway","synonyms":[{"name":"negative regulation of DDX58 signaling pathway","type":"exact"},{"name":"negative regulation of RIG-I signalling pathway","type":"exact"},{"name":"negative regulation of retinoic acid inducible gene I signaling pathway","type":"exact"}],"termid":"GO:0039536"}


id: PBO:0055509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2943","termid":"PBO:0055509"}


id: GO:0150087
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A single axon terminal bouton making contact onto two or more dendritic spines protruding from the same dendrite.","definition_xrefs":["PMID:11248111","GOC:aruk","PMID:10586883","PMID:24487234","GOC:bc","PMID:22028887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple synapse bouton","termid":"GO:0150086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"multiple synapse bouton, contacting single dendrite","synonyms":[{"name":"MSB1","type":"exact"},{"name":"type 1 multi-synapse bouton","type":"exact"},{"name":"type 1 multi-synaptic bouton","type":"exact"},{"name":"type 1 multiple spine synapse bouton","type":"exact"},{"name":"type 1 multiple-synapse bouton","type":"exact"},{"name":"type 1 multisynapse bouton","type":"exact"},{"name":"type 1 multisynaptic bouton","type":"exact"}],"termid":"GO:0150087"}


id: MONDO:0018394
data:
  {"annotated_genes":["SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009461"}]},"cv_name":"mondo","definition":"Male infertility with teratozoospermia due to single gene mutation is a rare, genetic male infertility due to sperm disorder characterized by the presence of spermatozoa with abnormal morphology, such as macrozoospermia or globozoospermia, in over 85% of sperm, resulting from mutation in a single gene known to cause teratozoospermia. It is a heterogeneous group that includes a wide range of abnormal sperm phenotypes affecting, solely or simultaneously, head, neck, midpiece, and/or tail.","definition_xrefs":["Orphanet:399808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male infertility","termid":"MONDO:0005372"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"male infertility with teratozoospermia due to single gene mutation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1643966","GARD:17654","UMLS:C4706677","SCTID:764096006"],"termid":"MONDO:0018394","terms_by_termid":{"MONDO:0009461":null},"xrefs":{"Monarch":{"xref_id":"0018394"}}}


id: FYPO:0000090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to N-ethylmaleimide. Cells stop growing (and may die) at a concentration of N-ethylmaleimide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to N-ethylmaleimide","synonyms":[{"name":"hypersensitive to N-ethylmaleimide","type":"exact"},{"name":"sensitive to N-ethylmaleimide during mitotic cell cycle","type":"related"},{"name":"sensitive to N-ethylmaleimide during vegetative growth","type":"exact"},{"name":"sensitive to NEM","type":"exact"}],"termid":"FYPO:0000090"}


id: MONDO:0020343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete alpha-crystallinopathy (obsolete MONDO:0020343)","secondary_identifiers":["Orphanet:98910"],"synonyms":[{"name":"CRYAB-related myofobrillar myopathy","type":"exact"}],"termid":"MONDO:0020343","xrefs":{"Monarch":{"xref_id":"0020343"}}}


id: MONDO:1010879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis that occurs in dogs due to a mutation in the CLN6 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, dog","termid":"MONDO:1011570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, CLN6-related, dog","secondary_identifiers":["OMIA:001443-9615"],"synonyms":[{"name":"CLN6","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, 6, dog","type":"related"}],"termid":"MONDO:1010879","xrefs":{"Monarch":{"xref_id":"1010879"}}}


id: MONDO:0004876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Prolonged dysfunction of the myocardium after a brief episode of severe ischemia, with gradual return of contractile activity.","definition_xrefs":["MESH:D017682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myocardial infarction","termid":"MONDO:0005068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"myocardial stunning","secondary_identifiers":["UMLS:C0206146","DOID:9767","MEDGEN:61526"],"termid":"MONDO:0004876","xrefs":{"Monarch":{"xref_id":"0004876"}}}


id: GO:0009615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to virus","secondary_identifiers":["Reactome:R-HSA-9824446"],"synonyms":[{"name":"response to viruses","type":"exact"}],"termid":"GO:0009615"}


id: GO:0072530
data:
  {"annotated_genes":["SJAG_04325","SJAG_03334","SJAG_03777","SJAG_00760","SJAG_02050","SJAG_00612","SJAG_03452","SJAG_04328"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[114536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098702"},{"annotations":[114537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098710"},{"annotations":[64655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903790"},{"annotations":[103291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[103292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[59113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[59112,104790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[72250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"},{"annotations":[117151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140140"},{"annotations":[94787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"}]},"cv_name":"biological_process","definition":"The process in which a purine-containing compound is transported across a membrane. A purine-containing compound is any compound that contains purine or a formal derivative thereof.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_00760":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_03777":null,"SJAG_04325":null,"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"purine-containing compound transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-2161517"],"synonyms":[{"name":"purine-containing compound membrane transport","type":"exact"}],"termid":"GO:0072530","terms_by_termid":{"GO:0035348":null,"GO:0098702":null,"GO:0098710":null,"GO:0140021":null,"GO:0140140":null,"GO:1903790":null,"GO:1990544":null,"GO:1990549":null,"GO:1990553":null,"GO:1990554":null,"GO:1990559":null}}


id: SO:0000270
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a threonine anticodon, and a 3' threonine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"threonine_tRNA_primary_transcript","termid":"SO:0000227"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonyl_tRNA","synonyms":[{"name":"threonyl tRNA","type":"exact"},{"name":"threonyl-transfer RNA","type":"related"},{"name":"threonyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000270"}


id: GO:0006110
data:
  {"annotated_genes":["SJAG_02785","SJAG_00685","SJAG_05314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71770],"is_not":false,"summary":null,"term":"GO:0006110"},{"annotations":[77912,74846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glycolysis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of purine nucleotide catabolic process","termid":"GO:0033121"},{"relation_name":"is_a","term_name":"regulation of generation of precursor metabolites and energy","termid":"GO:0043467"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of ATP metabolic process","termid":"GO:1903578"},{"relation_name":"regulates","term_name":"glycolytic process","termid":"GO:0006096"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_02785":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0055086","GO:0044281","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"regulation of glycolytic process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-170822","GO:0090525"],"synonyms":[{"name":"regulation of glycolysis involved in cellular glucose homeostasis","type":"exact"}],"termid":"GO:0006110","terms_by_termid":{"GO:0006110":null,"GO:0045820":null}}


id: PBO:0056792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFF pseudogene 1","termid":"PBO:0056792"}


id: PBO:0077694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine kinase non receptor 2","termid":"PBO:0077694"}


id: GO:1903103
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of potassium:proton antiporter activity.","definition_xrefs":["PMID:21041667","GOC:TermGenie","GO_REF:0000088","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"potassium:proton antiporter complex","termid":"GO:1903103"}


id: MONDO:0012077
data:
  {"annotated_genes":["SJAG_00053","SJAG_03170"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88475,88476],"is_not":false,"summary":null,"term":"MONDO:0012077"}]},"cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the VAPB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_03170":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1837728","GARD:10499","DOID:0050752","OMIM:608627","MEDGEN:325237","MESH:C563895"],"synonyms":[{"name":"ALS8","type":"exact"},{"name":"VAPB amyotrophic lateral sclerosis","type":"exact"},{"name":"amyotrophic lateral sclerosis 8","type":"exact"},{"name":"amyotrophic lateral sclerosis caused by mutation in VAPB","type":"exact"},{"name":"amyotrophic lateral sclerosis type 8","type":"exact"}],"termid":"MONDO:0012077","terms_by_termid":{"MONDO:0012077":null},"xrefs":{"Monarch":{"xref_id":"0012077"}}}


id: GO:0004130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 ferrocytochrome c + hydrogen peroxide = 2 ferricytochrome c + 2 H2O.","definition_xrefs":["EC:1.11.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cytochrome-c peroxidase activity","secondary_identifiers":["MetaCyc:CYTOCHROME-C-PEROXIDASE-RXN","RHEA:16581"],"synonyms":[{"name":"apocytochrome c peroxidase activity","type":"related"},{"name":"cytochrome c peroxidase activity","type":"related"},{"name":"cytochrome c-551 peroxidase activity","type":"related"},{"name":"cytochrome c-H2O oxidoreductase activity","type":"related"},{"name":"cytochrome peroxidase activity","type":"related"},{"name":"ferrocytochrome-c:hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"mesocytochrome c peroxidase azide","type":"related"},{"name":"mesocytochrome c peroxidase cyanate","type":"related"},{"name":"mesocytochrome c peroxidase cyanide","type":"related"}],"termid":"GO:0004130"}


id: MOD:01457
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to L-cysteine (not known as a natural, post-translational modification process).","definition_xrefs":["PubMed:18688235","PubMed:1849824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine residue","termid":"MOD:00014"},{"relation_name":"is_a","term_name":"sulfur substitution for oxygen","termid":"MOD:00749"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine (Ser)","synonyms":[{"name":"Cys(Ser)","type":"exact"}],"termid":"MOD:01457"}


id: PR:000027516
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcriptional regulator prz1 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:12637524","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional regulator prz1","termid":"PR:000027513"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prz1/UnMod","pombase_gene_id":"SPAC4G8.13c","synonyms":[{"name":"PomBase_original_PRO_term_name: transcriptional regulator prz1 unmodified form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-prz1/UnMod","type":"exact"},{"name":"prz1/UnMod","type":"exact"}],"termid":"PR:000027516"}


id: MONDO:0008186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancytopenia and occlusive vascular disease","secondary_identifiers":["MEDGEN:358375","MESH:C566836","OMIM:167850","UMLS:C1868652"],"synonyms":[{"name":"pancytopenia and occlusive vascular disease","type":"exact"}],"termid":"MONDO:0008186","xrefs":{"Monarch":{"xref_id":"0008186"}}}


id: GO:0097085
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An interferon regulatory factor complex that consists of a heterodimer of interferon regulatory factor 3 and interferon regulatory factor 5.","definition_xrefs":["GOC:cna","PMID:12138184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon regulatory factor complex","termid":"GO:0097071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"interferon regulatory factor 3-interferon regulatory factor 5 complex","synonyms":[{"name":"IRF3:IRF5 complex","type":"exact"}],"termid":"GO:0097085"}


id: GO:1903694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of mitotic G1 cell cycle arrest in response to nitrogen starvation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:15713656"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mitotic G1 cell cycle arrest in response to nitrogen starvation (obsolete GO:1903694)","synonyms":[{"name":"activation of G1 mitotic cell cycle arrest in response to nitrogen starvation","type":"narrow"},{"name":"activation of mitotic G1 cell cycle arrest in response to nitrogen starvation","type":"narrow"},{"name":"positive regulation of G1 mitotic cell cycle arrest in response to nitrogen starvation","type":"exact"},{"name":"up regulation of G1 mitotic cell cycle arrest in response to nitrogen starvation","type":"exact"},{"name":"up regulation of mitotic G1 cell cycle arrest in response to nitrogen starvation","type":"exact"},{"name":"up-regulation of G1 mitotic cell cycle arrest in response to nitrogen starvation","type":"exact"},{"name":"up-regulation of mitotic G1 cell cycle arrest in response to nitrogen starvation","type":"exact"},{"name":"upregulation of G1 mitotic cell cycle arrest in response to nitrogen starvation","type":"exact"},{"name":"upregulation of mitotic G1 cell cycle arrest in response to nitrogen starvation","type":"exact"}],"termid":"GO:1903694"}


id: GO:0019675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition or removal of a phosphate group from nicotinamide adenine dinucleotide (NAD), a coenzyme present in most living cells and derived from the B vitamin nicotinic acid.","definition_xrefs":["GOC:jl","ISBN:0618254153"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD phosphorylation and dephosphorylation (obsolete GO:0019675)","synonyms":[{"name":"NAD phosphorylation and dephosphorylation","type":"exact"},{"name":"nicotinamide adenine dinucleotide phosphorylation and dephosphorylation","type":"exact"}],"termid":"GO:0019675"}


id: GO:0002839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an immune response to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to tumor cell","termid":"GO:0002836"},{"relation_name":"is_a","term_name":"regulation of immune response to tumor cell","termid":"GO:0002837"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"immune response to tumor cell","termid":"GO:0002418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of immune response to tumor cell","synonyms":[{"name":"activation of immune response to tumor cell","type":"narrow"},{"name":"positive regulation of immune response to tumour cell","type":"exact"},{"name":"stimulation of immune response to tumor cell","type":"narrow"},{"name":"up regulation of immune response to tumor cell","type":"exact"},{"name":"up-regulation of immune response to tumor cell","type":"exact"},{"name":"upregulation of immune response to tumor cell","type":"exact"}],"termid":"GO:0002839"}


id: PBO:0087395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S/T protein kinase; required for PM lipid and protein homeostasis; involved in sphingolipid-mediated and cell integrity signaling pathways and endocytosis; phosphorylates and downregulates Fpk1p; phosphorylates and inactivates Orm1p/2p when sphingolipid synthesis is compromised; role in TORC1/2-dependent Rps6a/b phosphorylation; phosphorylated and activated by TORC2 and by Pkh1/2p in the presence of phytosphingosine; human homolog SGK1 complements the null and inviability of a ypk1 ypk2 mutant","termid":"PBO:0087395"}


id: PBO:0072482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 11","termid":"PBO:0072482"}


id: PBO:0050131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 41","termid":"PBO:0050131"}


id: GO:0045268
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The hexamer that possesses the catalytic activity of the plasma membrane hydrogen-transporting ATP synthase. Examples of this component are found in Bacterial species.","definition_xrefs":["PMID:10838056","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane proton-transporting ATP synthase, catalytic core (obsolete GO:0045268)","synonyms":[{"name":"hydrogen-transporting ATP synthase, catalytic core","type":"broad"},{"name":"proton-transporting ATP synthase, catalytic core","type":"broad"}],"termid":"GO:0045268"}


id: GO:0006923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The proteolytic degradation of cytoskeletal proteins that contributes to apoptosis, leading to the collapse of cytoskeletal structures.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah","ISBN:0815332181","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete cleavage of cytoskeletal proteins involved in execution phase of apoptosis (obsolete GO:0006923)","synonyms":[{"name":"apoptotic cleavage of cytoskeletal proteins","type":"exact"},{"name":"cleavage of cytoskeletal proteins involved in apoptosis","type":"broad"},{"name":"cleavage of cytoskeletal proteins involved in execution phase of apoptosis","type":"exact"}],"termid":"GO:0006923"}


id: PBO:0041971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC13 antisense RNA 1","termid":"PBO:0041971"}


id: PBO:0066738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 35","termid":"PBO:0066738"}


id: MONDO:0007961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megalencephaly","termid":"MONDO:0016608"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megalencephaly, autosomal dominant","secondary_identifiers":["OMIM:155350","UMLS:C3805727","MEDGEN:812057"],"synonyms":[{"name":"megalencephaly, autosomal dominant","type":"exact"}],"termid":"MONDO:0007961","xrefs":{"Monarch":{"xref_id":"0007961"}}}


id: GO:2000159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of planar cell polarity pathway involved in heart morphogenesis.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of planar cell polarity pathway involved in heart morphogenesis (obsolete GO:2000159)","termid":"GO:2000159"}


id: GO:0060851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands that contributes to the commitment of a venous endothelial cell to a lymphatic endothelial cell fate.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial growth factor receptor signaling pathway","termid":"GO:0048010"},{"relation_name":"part_of","term_name":"lymphatic endothelial cell fate commitment","termid":"GO:0060838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"vascular endothelial growth factor receptor signaling pathway involved in lymphatic endothelial cell fate commitment","synonyms":[{"name":"vascular endothelial growth factor receptor signalling pathway involved in lymphatic endothelial cell fate commitment","type":"exact"}],"termid":"GO:0060851"}


id: MONDO:0008405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete scapula, contour of vertebral border of (obsolete MONDO:0008405)","secondary_identifiers":["OMIM:181300"],"synonyms":[{"name":"scapula, contour of vertebral border of","type":"exact"}],"termid":"MONDO:0008405","xrefs":{"Monarch":{"xref_id":"0008405"}}}


id: MONDO:0008684
data:
  {"annotated_genes":["SJAG_01806"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87429],"is_not":false,"summary":null,"term":"MONDO:0008684"}]},"cv_name":"mondo","definition":"Wolf-Hirschhorn syndrome (WHS) is a developmental disorder characterized by typical craniofacial features, prenatal and postnatal growth impairment, intellectual disability, severe delayed psychomotor development, seizures, and hypotonia.","definition_xrefs":["Orphanet:280"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic genetic hearing loss (obsolete MONDO:0019589)","termid":"MONDO:0019589"},{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"chromosome 4 short arm deletion","termid":"MONDO:0022762"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01806":null},"genotype_count":0,"is_obsolete":false,"name":"Wolf-Hirschhorn syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1956097","DOID:0050460","NANDO:1200683","MedDRA:10050361","ICD10CM:Q93.3","NORD:1859","MESH:D054877","GARD:7896","OMIM:194190","icd11.foundation:1337401724","NANDO:2200962","SCTID:718226002","DECIPHER:1","MEDGEN:408255","NCIT:C35528"],"synonyms":[{"name":"4p deletion syndrome","type":"exact"},{"name":"4p syndrome","type":"related"},{"name":"4p- syndrome","type":"exact"},{"name":"Pitt syndrome","type":"exact"},{"name":"Pitt-Rogers-Danks syndrome","type":"exact"},{"name":"WHS","type":"related"},{"name":"Wittwer syndrome","type":"exact"},{"name":"Wolf syndrome","type":"related"},{"name":"Wolf-Hirschhorn syndrome","type":"exact"},{"name":"Wolf-Hirschhorn syndrome, Isolated cases","type":"exact"},{"name":"chromosome 4P16.3 deletion syndrome","type":"related"},{"name":"chromosome 4p syndrome","type":"related"},{"name":"chromosome 4p16.3 deletion syndrome","type":"exact"},{"name":"distal deletion 4p","type":"exact"},{"name":"distal monosomy 4p","type":"exact"},{"name":"microcephaly, IUGR, hypertelorism, ptosis, iris coloboma, hooked nose, external ear dysplasia, psychomotor retardation","type":"related"},{"name":"telomeric deletion 4p","type":"exact"}],"termid":"MONDO:0008684","terms_by_termid":{"MONDO:0008684":null},"xrefs":{"Monarch":{"xref_id":"0008684"}}}


id: FYPO:0001184
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of maltose alpha-glucosidase (also known as maltase) activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal alpha-glucosidase activity","termid":"FYPO:0001183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal maltase activity","synonyms":[{"name":"abnormal maltose alpha-glucosidase activity","type":"exact"}],"termid":"FYPO:0001184"}


id: GO:1900463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of cellular response to alkalinity by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:12509465","PMID:17023428","GOC:dgf","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular response to alkaline pH by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900463)","synonyms":[{"name":"negative regulation of cellular response to alkalinity by negative regulation of transcription from RNA polymerase II promoter","type":"broad"},{"name":"negative regulation of cellular response to basic pH by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900463"}


id: PBO:0031623
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_sporulation_frequency","termid":"PBO:0031623"}


id: PBO:0026759
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_polyubiquitination_during_cellular_response_to_UV","termid":"PBO:0026759"}


id: PATO:0000543
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000543 light intensivity sensitivity value (obsolete PATO:0000543)","termid":"PATO:0000543"}


id: MONDO:0001992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the rete testis","direct_ancestors":[{"relation_name":"is_a","term_name":"rete testis neoplasm","termid":"MONDO:0003562"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"rete testis adenocarcinoma","secondary_identifiers":["DOID:14544","MEDGEN:209023","UMLS:C0863024","NCIT:C8955"],"synonyms":[{"name":"adenocarcinoma of rete testis","type":"exact"},{"name":"adenocarcinoma of the rete testis","type":"exact"},{"name":"carcinoma, rete testis, malignant","type":"exact"},{"name":"rete testis adenocarcinoma","type":"exact"}],"termid":"MONDO:0001992","xrefs":{"Monarch":{"xref_id":"0001992"}}}


id: MONDO:0002841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eosinophilic gastroenteritis (obsolete MONDO:0002841)","termid":"MONDO:0002841","xrefs":{"Monarch":{"xref_id":"0002841"}}}


id: GO:0071500
data:
  {"annotated_genes":["SJAG_04063"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104150],"is_not":false,"summary":null,"term":"GO:0071500"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrosative stress stimulus. Nitrosative stress is a state often resulting from exposure to high levels of nitric oxide (NO) or the highly reactive oxidant peroxynitrite, which is produced following interaction of NO with superoxide anions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrosative stress","termid":"GO:0051409"},{"relation_name":"is_a","term_name":"cellular response to chemical stress","termid":"GO:0062197"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nitrosative stress","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071500","terms_by_termid":{"GO:0071500":null}}


id: GO:0140857
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3-threonine (position 45) + ATP = histone H3-phosphothreonine (position 45) + ADP. This reaction is the addition of a phosphate group to the threonine residue at position 45 of histone H3.","definition_xrefs":["PMID:24820035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H3 kinase activity","termid":"GO:0140996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0004672","GO:0003824","GO:0016301","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"histone H3T45 kinase activity","synonyms":[{"name":"histone kinase activity (H3-T45 specific)","type":"exact"},{"name":"histone threonine kinase activity (H3-T45 specific)","type":"exact"},{"name":"histone-threonine kinase activity (H3-T45 specific)","type":"exact"}],"termid":"GO:0140857"}


id: PBO:0057297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 513a-2","termid":"PBO:0057297"}


id: MONDO:0020434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect","termid":"MONDO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial septal defect, ostium secundum type","secondary_identifiers":["icd11.foundation:1875768490","GARD:5865","Orphanet:99103","MedDRA:10031302","MedDRA:10031303","NANDO:2200266","MEDGEN:91034","UMLS:C0344724"],"synonyms":[{"name":"ASD ostium secundum type","type":"related"},{"name":"ASD, ostium secundum type","type":"exact"},{"name":"osASD","type":"related"},{"name":"ostium secundum ASD","type":"related"},{"name":"ostium secundum atrial septal defect","type":"related"}],"termid":"MONDO:0020434","xrefs":{"Monarch":{"xref_id":"0020434"}}}


id: PBO:0113333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; localizes to the ER and peroxisomes; authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0113333"}


id: GO:0051864
data:
  {"annotated_genes":["SJAG_03041","SJAG_03286","SJAG_03664"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72181,89244],"is_not":false,"summary":null,"term":"GO:0051864"},{"annotations":[68275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140680"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a modified lysine residue at position 36 of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:16362057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H3 demethylase activity","termid":"GO:0141052"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03041":null,"SJAG_03286":null,"SJAG_03664":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016491","GO:0032452","GO:0003674"],"is_obsolete":false,"name":"histone H3K36 demethylase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"[histone-H3]-lysine-36 demethylase activity","type":"exact"},{"name":"histone H3-K36 demethylase activity","type":"exact"},{"name":"histone H3-lysine-36 demethylase activity","type":"exact"},{"name":"histone H3-methyl-lysine-36 demethylase activity","type":"exact"},{"name":"histone demethylase activity (H3-K36 specific)","type":"exact"},{"name":"histone-lysine (H3-K36) demethylase activity","type":"exact"},{"name":"histone-lysine demethylase activity (H3-K36 specific)","type":"exact"},{"name":"histone-lysine(H3-K36) demethylase activity","type":"exact"}],"termid":"GO:0051864","terms_by_termid":{"GO:0051864":null,"GO:0140680":null}}


id: SO:0001992
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-synonymous variant is an inframe, protein altering variant, resulting in a codon change.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inframe_variant","termid":"SO:0001650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonsynonymous_variant","synonyms":[{"name":"non_synonymous_coding","type":"exact"},{"name":"nonsynonymous variant","type":"exact"}],"termid":"SO:0001992"}


id: PR:Q11120
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ofd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q11120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 3,4-dihydroxylase ofd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.08c","synonyms":[{"name":"2-oxoglutarate and Fe(II) dioxygenase domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PKHD-type hydroxylase ofd1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ofd1","type":"exact"}],"termid":"PR:Q11120"}


id: MOD:01263
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:270#K","PubMed:15549660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleophilic addtion to cytopiloyne","termid":"MOD:00590"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addtion to cytopiloyne - site K","synonyms":[{"name":"Cytopiloyne","type":"related"},{"name":"nucleophilic addtion to cytopiloyne","type":"related"}],"termid":"MOD:01263"}


id: PBO:0059206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member X13, pseudogene","termid":"PBO:0059206"}


id: GO:0120299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histamine + L-glutaminyl-[protein] = 5-histaminyl-L-glutamyl-[protein].","definition_xrefs":["PMID:23022564","PMID:23797785","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"peptide histaminyltransferase activity","secondary_identifiers":["RHEA:66564"],"termid":"GO:0120299"}


id: PBO:0026997
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_binding_at_PCB","termid":"PBO:0026997"}


id: PBO:0053376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 302","termid":"PBO:0053376"}


id: PBO:0087296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Single-stranded DNA endonuclease (with Rad10p); cleaves single-stranded DNA during nucleotide excision repair and double-strand break repair; subunit of Nucleotide Excision Repair Factor 1 (NEF1); homolog of human XPF protein","termid":"PBO:0087296"}


id: MONDO:1012875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Parkinson disease that occurs in crab-eating macaques due to a mutation in the PINK1 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Parkinson disease, non-human animal","termid":"MONDO:1012984"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parkinson disease, PINK1-related, crab-eating macaque","secondary_identifiers":["OMIA:002361-9541"],"termid":"MONDO:1012875","xrefs":{"Monarch":{"xref_id":"1012875"}}}


id: GO:2001198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dendritic cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte differentiation","termid":"GO:1902105"},{"relation_name":"regulates","term_name":"dendritic cell differentiation","termid":"GO:0097028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dendritic cell differentiation","termid":"GO:2001198"}


id: PBO:0045141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 10","termid":"PBO:0045141"}


id: PBO:0030949
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_aggregation_at_cell_tip","termid":"PBO:0030949"}


id: GO:0160260
data:
  {"annotated_genes":["SJAG_00476","SJAG_00450"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68949,80702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008418"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-asparaginyl-[protein] + H2O = L-aspartyl-[protein] + NH4+.","definition_xrefs":["PMID:25752576","PMID:30092200","PMID:39719712","RHEA:57416","PMID:40240600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00450":null,"SJAG_00476":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810","GO:0140096"],"is_obsolete":false,"name":"protein asparagine deamidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0160260","terms_by_termid":{"GO:0008418":null}}


id: MOD:00704
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively forms a double bond by removing a molecule of water from a residue.","definition_xrefs":["DeltaMass:0","Unimod:23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrated residue","synonyms":[{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"}],"termid":"MOD:00704"}


id: MOD:01505
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ4plex-116 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-116 reporter+balance reagent acylated residue","termid":"MOD:01499"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-116 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:01505"}


id: FYPO:0002834
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at centromeric regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere","termid":"FYPO:0000146"},{"relation_name":"is_a","term_name":"decreased chromatin silencing","termid":"FYPO:0002353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased chromatin silencing at centromere","synonyms":[{"name":"decreased chromatin silencing at centromere during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at centromere during vegetative growth","type":"exact"},{"name":"decreased heterochromatin silencing at centromere","type":"related"},{"name":"reduced chromatin silencing at centromere","type":"exact"}],"termid":"FYPO:0002834"}


id: SO:0001409
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region which is intended for use in an experiment.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"region","termid":"SO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biomaterial_region","synonyms":[{"name":"biomaterial region","type":"exact"}],"termid":"SO:0001409"}


id: PBO:0111943
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonuclease_3 family","termid":"PBO:0111943"}


id: PBO:0040947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 18","termid":"PBO:0040947"}


id: SO:0001869
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A candidate gene whose function has something in common biologically with the trait under investigation.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"candidate_gene","termid":"SO:0001867"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functional_candidate_gene","synonyms":[{"name":"functional candidate gene","type":"exact"},{"name":"functional target gene","type":"exact"}],"termid":"SO:0001869"}


id: MONDO:0016687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare variant of diffuse astrocytoma. It is predominantly composed of neoplastic astrocytes showing a small cell body with few, flaccid processes with a low content of glial filaments and scant GFAP expression. This lesion is not well defined and is considered by some authors as an occasional histopathological feature rather than a reproducibly identifiable variant. When occurring in children, this neoplasm may be difficult to separate from pilocytic juvenile astrocytoma. (Adapted from WHO)","definition_xrefs":["NCIT:C4320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse astrocytoma","termid":"MONDO:0016686"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoplasmic astrocytoma","secondary_identifiers":["ICDO:9410/3","UMLS:C0334580","DOID:7008","MEDGEN:87268","Orphanet:251598","GARD:20707"],"synonyms":[{"name":"protoplasmic astrocytic tumor","type":"exact"},{"name":"protoplasmic astrocytic tumour","type":"exact"},{"name":"protoplasmic astrocytoma","type":"exact"},{"name":"protoplasmic astrocytoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0016687","xrefs":{"Monarch":{"xref_id":"0016687"}}}


id: GO:0036355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tyrosine + S-adenosyl-L-methionine + reduced acceptor = 2-iminoacetate + 4-methylphenol + 5'-deoxyadenosine + L-methionine + acceptor + 2 H+.","definition_xrefs":["PMID:17403671","EC:4.1.99.19","MetaCyc:RXN-11319","GOC:crds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-iminoacetate synthase activity","secondary_identifiers":["RHEA:26361"],"termid":"GO:0036355"}


id: FYPO:0000327
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of trichostatin A than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002682","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to trichostatin A","synonyms":[{"name":"resistance to trichostatin A during mitotic cell cycle","type":"related"},{"name":"resistance to trichostatin A during vegetative growth","type":"exact"},{"name":"resistant to trichostatin A","type":"exact"}],"termid":"FYPO:0000327"}


id: GO:0071000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a magnetic stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to magnetism","synonyms":[{"name":"response to magnetic stimulus","type":"exact"}],"termid":"GO:0071000"}


id: GO:0018803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3E)-4-(2-carboxyphenyl)-2-oxobut-3-enoate = 2-carboxybenzaldehyde + pyruvate.","definition_xrefs":["EC:4.1.2.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"4-(2-carboxyphenyl)-2-oxobut-3-enoate aldolase activity","secondary_identifiers":["RHEA:16453","UM-BBD_reactionID:r0487","MetaCyc:4.1.2.34-RXN"],"synonyms":[{"name":"(3E)-4-(2-carboxyphenyl)-2-oxobut-3-enoate 2-carboxybenzaldehyde-lyase activity","type":"narrow"},{"name":"(3Z)-4-(2-carboxyphenyl)-2-oxobut-3-enoate 2-carboxybenzaldehyde-lyase (pyruvate-forming)","type":"related"},{"name":"(3Z)-4-(2-carboxyphenyl)-2-oxobut-3-enoate 2-carboxybenzaldehyde-lyase activity","type":"narrow"},{"name":"2'-carboxybenzalpyruvate aldolase activity","type":"related"},{"name":"trans-2'-carboxybenzalpyruvate hydratase-aldolase activity","type":"exact"}],"termid":"GO:0018803"}


id: PBO:0043473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 10","termid":"PBO:0043473"}


id: PBO:0042856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 70","termid":"PBO:0042856"}


id: PBO:0056367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 6 pseudogene 4","termid":"PBO:0056367"}


id: MONDO:1010698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any glycogen storage disease that occurs in dogs due to a mutation in the G6PC1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease, non-human animal","termid":"MONDO:1011419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen storage disease, G6PC1-related, dog","secondary_identifiers":["OMIA:000418-9615"],"synonyms":[{"name":"glycogen storage disease Ia, dog","type":"related"}],"termid":"MONDO:1010698","xrefs":{"Monarch":{"xref_id":"1010698"}}}


id: GO:1990709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the assembly, arrangement of constituent parts, or disassembly of a presynaptic active zone.","definition_xrefs":["PMID:17068967","GOC:pr","PMID:16865347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"presynaptic active zone organization","synonyms":[{"name":"presynaptic active zone organisation","type":"exact"}],"termid":"GO:1990709"}


id: SO:0000222
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding lysyl tRNA (SO:0000265).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine_tRNA_primary_transcript","synonyms":[{"name":"lysine tRNA primary transcript","type":"exact"}],"termid":"SO:0000222"}


id: MONDO:0043003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of acanthosis nigricans (disease) that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acanthosis nigricans","termid":"MONDO:0007035"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial acanthosis nigricans","secondary_identifiers":["MESH:C531598","OMIM:100600","UMLS:C2930792","MEDGEN:419638"],"synonyms":[{"name":"acanthosis nigricans","type":"related"},{"name":"hereditary acanthosis nigricans (disease)","type":"exact"}],"termid":"MONDO:0043003","xrefs":{"Monarch":{"xref_id":"0043003"}}}


id: PBO:0088104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc) transporter; required for cell wall chitin synthesis; localized to the ER","termid":"PBO:0088104"}


id: PBO:0036317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human C12orf45 ortholog, domain architectures indicate a possible role in translation","termid":"PBO:0036317"}


id: GO:0034717
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains Gemin6, Gemin7, and unrip (STRAP), and can bind to snRNAs; may play a role in snRNP assembly.","definition_xrefs":["GOC:mah","PMID:17640873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Gemin6-Gemin7-unrip complex","termid":"GO:0034717"}


id: GO:0046568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methylbutanol + NAD(P)+ = 3-methylbutanal + NAD(P)H + H+. 3-methylbutanal is also known as isovaleraldehyde.","definition_xrefs":["EC:1.1.1.265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase [NAD(P)+] activity","termid":"GO:0018455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-methylbutanal reductase [NAD(P)H] activity","secondary_identifiers":["MetaCyc:1.1.1.265-RXN"],"synonyms":[{"name":"3-methylbutanal reductase [NAD(P)] activity","type":"related"},{"name":"3-methylbutanol:NAD(P) oxidoreductase activity","type":"exact"},{"name":"3-methylbutyraldehyde reductase activity","type":"exact"},{"name":"isoamyl alcohol oxidase activity","type":"exact"}],"termid":"GO:0046568"}


id: PBO:0071509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 12","termid":"PBO:0071509"}


id: FYPO:0007583
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is decreased during telophase of mitosis.","definition_xrefs":["PMID:19736319","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cytoplasm","termid":"FYPO:0006099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to cytoplasm during mitotic telophase","synonyms":[{"name":"decreased protein localisation to cytoplasm during mitotic telophase","type":"exact"},{"name":"decreased protein localization to cytoplasm during telophase during vegetative growth","type":"exact"},{"name":"decreased protein localization to cytoplasm during telophase of mitotic cell cycle","type":"exact"},{"name":"reduced protein localization to cytoplasm during mitotic telophase","type":"exact"}],"termid":"FYPO:0007583"}


id: GO:0036241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamate into 4-hydroxybutyrate.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate catabolic process","termid":"GO:0006538"},{"relation_name":"is_a","term_name":"short-chain fatty acid metabolic process","termid":"GO:0046459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"glutamate catabolic process to 4-hydroxybutyrate","termid":"GO:0036241"}


id: PBO:0070879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 11","termid":"PBO:0070879"}


id: PBO:0085466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pre-mRNA splicing factor; facilitates the cooperative formation of U2/U6 helix II in association with stem II in the spliceosome, function may be regulated by Slu7p","termid":"PBO:0085466"}


id: PBO:0065927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 1 pseudogene 1","termid":"PBO:0065927"}


id: PBO:0041328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 81","termid":"PBO:0041328"}


id: PBO:0056422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myristoylated alanine rich protein kinase C substrate pseudogene 1","termid":"PBO:0056422"}


id: GO:0071154
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of the guanine nucleotide exchange factor synembrin with the alpha(i)1 subunit of a heterotrimeric G protein.","definition_xrefs":["GOC:mah","PMID:12509430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"G-protein alpha(i)1-synembrin complex","synonyms":[{"name":"Ric-8A G(i) alpha-1 subunit complex","type":"narrow"},{"name":"Ric-8A G(i) alpha-2 subunit complex","type":"related"}],"termid":"GO:0071154"}


id: GO:2000411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of thymocyte migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell migration","termid":"GO:2000405"},{"relation_name":"is_a","term_name":"regulation of thymocyte migration","termid":"GO:2000410"},{"relation_name":"negatively_regulates","term_name":"thymocyte migration","termid":"GO:0072679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of thymocyte migration","synonyms":[{"name":"negative regulation of immature T cell migration","type":"related"},{"name":"negative regulation of immature T lymphocyte migration","type":"related"},{"name":"negative regulation of immature T-cell migration","type":"related"},{"name":"negative regulation of immature T-lymphocyte migration","type":"related"},{"name":"negative regulation of thymic lymphocyte migration","type":"exact"}],"termid":"GO:2000411"}


id: GO:0042001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of sex and sexual phenotypes in a hermaphroditic organism's soma. An example of this is found in Caenorhabditis elegans.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic sex determination","termid":"GO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hermaphrodite somatic sex determination","secondary_identifiers":["GO:0042002"],"termid":"GO:0042001"}


id: PBO:0034749
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Unlike the human ortholog, this protein is not associated with the NADH complex. Fission yeast does not have the other 40 subunits that are present in that complex in mammals. See associated reference for more information on the human protein","termid":"PBO:0034749"}


id: PR:Q10240
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug133 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 133 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.07","synonyms":[{"name":"Spom972h-mug133","type":"exact"}],"termid":"PR:Q10240"}


id: GO:0047952
data:
  {"annotated_genes":["SJAG_01012","SJAG_00409"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70831,63826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141152"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + NAD(P)+ = glycerone phosphate + NAD(P)H + H+.","definition_xrefs":["PMID:28326","EC:1.1.1.94"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_01012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase [NAD(P)+] activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["GO:0036439","GO:0106257","Reactome:R-HSA-75889","GO:0004367","MetaCyc:GLYC3PDEHYDROGBIOSYN-RXN"],"synonyms":[{"name":"L-alpha-glycerol phosphate dehydrogenase activity","type":"broad"},{"name":"L-alpha-glycerophosphate dehydrogenase activity","type":"broad"},{"name":"L-glycerol phosphate dehydrogenase activity","type":"broad"},{"name":"L-glycerol-3-phosphate:NAD(P) oxidoreductase activity","type":"related"},{"name":"L-glycerophosphate dehydrogenase activity","type":"broad"},{"name":"glycerol phosphate dehydrogenase (nicotinamide adenine dinucleotide (phosphate)) activity","type":"exact"},{"name":"glycerol-3-phosphate dehydrogenase (NAD(P)+) activity","type":"exact"},{"name":"hydroglycerophosphate dehydrogenase activity","type":"broad"},{"name":"sn-glycerol-3-phosphate:NAD(P)+ 2-oxidoreductase activity","type":"related"}],"termid":"GO:0047952","terms_by_termid":{"GO:0141152":null}}


id: PBO:0055605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3043","termid":"PBO:0055605"}


id: PBO:0051886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin alpha FG-GAP repeat containing 1","termid":"PBO:0051886"}


id: GO:0021868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The unequal mitotic division of a forebrain radial glial cell that gives rise to a radial glial cell and a ventricular zone cell.","definition_xrefs":["GOC:dph","PMID:16226447","GO_REF:0000021","GOC:jid","GOC:cls","GOC:dgh"],"gene_count":0,"genotype_count":0,"name":"obsolete ventricular zone cell-producing asymmetric radial glial cell division in forebrain (obsolete GO:0021868)","termid":"GO:0021868"}


id: FYPO:0004637
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate and other catalytic properties of a DNA-directed DNA polymerase activity are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal DNA-directed DNA polymerase activity","synonyms":[{"name":"normal DNA polymerase activity","type":"broad"}],"termid":"FYPO:0004637"}


id: PR:Q9US46
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase RNF14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase itt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.14","secondary_identifiers":["UniProtKB:Q9US46"],"synonyms":[{"name":"RING finger protein itt1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RNF14","type":"exact"}],"termid":"PR:Q9US46"}


id: GO:0002562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immune receptor genes are diversified through recombination of the germline genetic elements within a single genetic locus.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:16102575","PMID:16166509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"},{"relation_name":"is_a","term_name":"somatic cell DNA recombination","termid":"GO:0016444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"somatic diversification of immune receptors via germline recombination within a single locus","termid":"GO:0002562"}


id: FYPO:0005232
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to a protein complex is normal (i.e. indistinguishable from wild type). The protein whose binding to the protein complex is assayed may be encoded by the mutated gene, or may be encoded by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein-protein interaction","termid":"FYPO:0000703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000702","FYPO:0000652"],"is_obsolete":false,"name":"normal protein complex binding","termid":"FYPO:0005232"}


id: FYPO:0000120
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the presence, distribution, or morphology of the mitotic or meiotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton","termid":"FYPO:0002399"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000054","FYPO:0002399"],"is_obsolete":false,"name":"abnormal spindle","secondary_identifiers":["FYPO:0000367"],"synonyms":[{"name":"spindle defects","type":"exact"}],"termid":"FYPO:0000120"}


id: PBO:0060494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylneuraminate synthase","termid":"PBO:0060494"}


id: MONDO:0012089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis prematurity syndrome is a rare, syndromic congenital ichthyosis characterized by premature birth (at gestational weeks 30-32, in general) in addition to thick, caseous and desquamating epidermis, neonatal respiratory asphyxia, and persistent eosinophilia. After the perinatal period, a spontaneous improvement in the health of affected patients is observed and skin features (vernix caseosa-like scale) evolve into a mild presentation of flat follicular hyperkeratosis with atopy.","definition_xrefs":["Orphanet:88621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"pneumonitis","termid":"MONDO:0043905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis prematurity syndrome","secondary_identifiers":["MEDGEN:324839","OMIM:608649","MESH:C536271","SCTID:12381000132107","GARD:9886","UMLS:C1837610","NCIT:C62590"],"synonyms":[{"name":"IPS","type":"exact"},{"name":"congenital ichthyosis type 4","type":"exact"},{"name":"ichthyosis congenita 4","type":"related"},{"name":"ichthyosis congenita IV","type":"related"},{"name":"ichthyosis prematurity syndrome","type":"exact"},{"name":"ichthyosis-prematurity syndrome","type":"related"},{"name":"idiopathic pneumonia syndrome","type":"exact"}],"termid":"MONDO:0012089","xrefs":{"Monarch":{"xref_id":"0012089"}}}


id: GO:1990811
data:
  {"annotated_genes":["SJAG_03062","SJAG_03116","SJAG_01546"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75848,98679,104982],"is_not":false,"summary":null,"term":"GO:1990811"}]},"cv_name":"cellular_component","definition":"A protein ternary complex that anchors microtubule minus ends to mitotic spindle pole bodies. The founding complex contains a microtubule anchoring protein (Msd1 in fission yeast), A WD-repeat Wdr8 family protein and and a minus end-directed kinesin.","definition_xrefs":["PMID:25987607","PMID:29021344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01546":null,"SJAG_03062":null,"SJAG_03116":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MWP complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Msd1-Wdr8-Pkl1 complex","type":"exact"}],"termid":"GO:1990811","terms_by_termid":{"GO:1990811":null}}


id: GO:0019059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The set of processes involved in the start of virus infection of cells.","definition_xrefs":["ISBN:0781702534"],"gene_count":0,"genotype_count":0,"name":"obsolete initiation of viral infection (obsolete GO:0019059)","synonyms":[{"name":"initiation of viral infection","type":"exact"}],"termid":"GO:0019059"}


id: PBO:0049879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatocellular carcinoma, down-regulated 1","termid":"PBO:0049879"}


id: PBO:0061563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase ecto","termid":"PBO:0061563"}


id: PBO:0040438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 8A2 pseudogene 3","termid":"PBO:0040438"}


id: PR:000050511
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiotic recombination protein rec8 (Schizosaccharomyces pombe) that has been phosphorylated at the position equivalent to Ser-450 of the amino acid sequence represented by UniProtKB:P36626. Example: UniProtKB:P36626, Ser-450, MOD:00046.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:33888556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic recombination protein rec8 (Schizosaccharomyces pombe)","termid":"PR:000050510"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rec8/Phos(S450)","pombase_gene_id":"SPBC29A10.14","synonyms":[{"name":"PomBase_original_PRO_term_name: meiotic recombination protein rec8 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rec8/Phos:1","type":"exact"},{"name":"UniProtKB:P36626, Ser-450, MOD:00046","type":"narrow"},{"name":"rec8/Phos(S450)","type":"exact"}],"termid":"PR:000050511"}


id: PBO:0057022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR122 host gene","termid":"PBO:0057022"}


id: MONDO:0033572
data:
  {"annotated_genes":["SJAG_04821"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87542],"is_not":false,"summary":null,"term":"MONDO:0033572"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ALG14-congenital disorder of glycosylation","termid":"MONDO:0100559"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04821":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"intellectual developmental disorder with epilepsy, behavioral abnormalities, and coarse facies","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1759589","OMIM:619031","UMLS:C5436646","GARD:18529"],"synonyms":[{"name":"IDDEBF","type":"exact"},{"name":"intellectual developmental disorder with epilepsy, behavioral abnormalities, and coarse facies","type":"exact"}],"termid":"MONDO:0033572","terms_by_termid":{"MONDO:0033572":null},"xrefs":{"Monarch":{"xref_id":"0033572"}}}


id: MONDO:0013681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder caused by mutation in the AMACR gene. Racemization is the prerequisite to beta-oxidation for branched chain fatty acids and bile acids. It is characterized by neurological abnormalities that appear in adulthood and include cognitive decline, seizures, and sensorimotor neuropathy. AMACR deficiency rarely presents as liver disease in infancy.","definition_xrefs":["NCIT:C119677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of peroxisomal beta oxidation","termid":"MONDO:0019233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053"],"is_obsolete":false,"name":"alpha-methylacyl-CoA racemase deficiency","secondary_identifiers":["DOID:0060602","GARD:15787","MESH:C565768","OMIM:614307","MEDGEN:482058","UMLS:C3280428","SCTID:700463002","EFO:1001980","NANDO:1200768"],"synonyms":[{"name":"AMACR","type":"exact"},{"name":"AMACR deficiency","type":"exact"},{"name":"AMACRD","type":"related"},{"name":"alpha-methylacyl-CoA racemase deficiency","type":"exact"}],"termid":"MONDO:0013681","xrefs":{"Monarch":{"xref_id":"0013681"}}}


id: PBO:0039767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 2","termid":"PBO:0039767"}


id: PBO:0072479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 8","termid":"PBO:0072479"}


id: PBO:0050069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histocompatibility minor 13","termid":"PBO:0050069"}


id: PBO:0082146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyl-CoA:sterol acyltransferase; endoplasmic reticulum enzyme that contributes the major sterol esterification activity in the absence of oxygen; ARE1 has a paralog, ARE2, that arose from the whole genome duplication","termid":"PBO:0082146"}


id: GO:0090692
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The site on the mitochondrial membrane where the separation of a single continuous mitochondrial membrane into two membranes occurs as a final step in mitochondrial fission.","definition_xrefs":["GOC:bc","PMID:26618722","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitochondrial membrane","termid":"GO:0031966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"mitochondrial membrane scission site","termid":"GO:0090692"}


id: PBO:0074280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT1 antisense RNA 1","termid":"PBO:0074280"}


id: GO:0046134
data:
  {"annotated_genes":["SJAG_00694","SJAG_04264","SJAG_05029"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115810,99651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"},{"annotations":[75085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside metabolic process","termid":"GO:0006213"},{"relation_name":"is_a","term_name":"nucleoside biosynthetic process","termid":"GO:0009163"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound biosynthetic process","termid":"GO:0072528"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00694":null,"SJAG_04264":null,"SJAG_05029":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"pyrimidine nucleoside biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-500753"],"synonyms":[{"name":"pyrimidine nucleoside anabolism","type":"exact"},{"name":"pyrimidine nucleoside biosynthesis","type":"exact"},{"name":"pyrimidine nucleoside formation","type":"exact"},{"name":"pyrimidine nucleoside synthesis","type":"exact"}],"termid":"GO:0046134","terms_by_termid":{"GO:0043097":null,"GO:0046132":null}}


id: PBO:0046766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 6","termid":"PBO:0046766"}


id: PBO:0049660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 14","termid":"PBO:0049660"}


id: PBO:0060454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAGPA antisense RNA 1","termid":"PBO:0060454"}


id: PBO:0049559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 21","termid":"PBO:0049559"}


id: PBO:0064198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placenta enriched 1","termid":"PBO:0064198"}


id: PBO:0013745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxymethylbilane synthase Hem3 (predicted)","termid":"PBO:0013745"}


id: MONDO:0016280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma involving a uterine cervix.","definition_xrefs":["MONDO:patterns/sarcoma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical cancer","termid":"MONDO:0002974"},{"relation_name":"is_a","term_name":"sarcoma","termid":"MONDO:0005089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"sarcoma of cervix uteri","secondary_identifiers":["ICD10CM:C53.0","GARD:20493","MEDGEN:1842604","Orphanet:213797","UMLS:C5679807"],"synonyms":[{"name":"cervical malignant mesenchymal tumor","type":"exact"},{"name":"cervical malignant mesenchymal tumour","type":"exact"},{"name":"cervical sarcoma","type":"exact"},{"name":"malignant mesenchymal tumor of cervix uteri","type":"exact"},{"name":"malignant mesenchymal tumour of cervix uteri","type":"exact"},{"name":"sarcoma of uterine cervix","type":"exact"},{"name":"uterine cervix sarcoma","type":"exact"}],"termid":"MONDO:0016280","xrefs":{"Monarch":{"xref_id":"0016280"}}}


id: PBO:0055904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 27","termid":"PBO:0055904"}


id: MONDO:0010025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature-obesity syndrome","secondary_identifiers":["MESH:C564821","UMLS:C1849235","OMIM:269870","MEDGEN:341410"],"synonyms":[{"name":"SSOS","type":"related"},{"name":"short stature-obesity syndrome","type":"exact"}],"termid":"MONDO:0010025","xrefs":{"Monarch":{"xref_id":"0010025"}}}


id: GO:0004340
data:
  {"annotated_genes":["SJAG_04334","SJAG_04495"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71968,77863],"is_not":false,"summary":null,"term":"GO:0004340"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-glucose = ADP + D-glucose-6-phosphate.","definition_xrefs":["EC:2.7.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexokinase activity","termid":"GO:0004396"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"glucokinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:17825","Reactome:R-HSA-5621918","Reactome:R-HSA-5621888","MetaCyc:GLUCOKIN-RXN","Reactome:R-HSA-70420"],"synonyms":[{"name":"ATP:D-glucose 6-phosphotransferase activity","type":"related"},{"name":"glucokinase (phosphorylating)","type":"related"},{"name":"glucose kinase activity","type":"related"}],"termid":"GO:0004340","terms_by_termid":{"GO:0004340":null}}


id: MONDO:0100451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A ciliopathy caused by biallelic variants in the CEP290 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEP290-related ciliopathy","synonyms":[{"name":"BBS14","type":"narrow"},{"name":"Bardet-Biedl syndrome 14","type":"narrow"},{"name":"Bardet-Biedl syndrome type 14","type":"narrow"},{"name":"CEP290 Joubert syndrome","type":"narrow"},{"name":"CEP290 Leber congenital amaurosis","type":"narrow"},{"name":"CEP290 Meckel syndrome","type":"narrow"},{"name":"CEP290 Senior-Loken syndrome","type":"narrow"},{"name":"CEP290 ciliopathy","type":"exact"},{"name":"JBTS5","type":"narrow"},{"name":"Joubert syndrome 5","type":"narrow"},{"name":"Joubert syndrome caused by mutation in CEP290","type":"narrow"},{"name":"Joubert syndrome type 5","type":"narrow"},{"name":"LCA10","type":"narrow"},{"name":"Leber congenital amaurosis 10","type":"narrow"},{"name":"Leber congenital amaurosis caused by mutation in CEP290","type":"narrow"},{"name":"Leber congenital amaurosis type 10","type":"narrow"},{"name":"MKS4","type":"narrow"},{"name":"Meckel syndrome 4","type":"narrow"},{"name":"Meckel syndrome caused by mutation in CEP290","type":"narrow"},{"name":"Meckel syndrome, type 4","type":"narrow"},{"name":"Meckel-Gruber syndrome, type 4","type":"narrow"},{"name":"Meckel-like Cerebrorenodigital syndrome","type":"narrow"},{"name":"SENIOR-Loken syndrome 6","type":"narrow"},{"name":"SLSN6","type":"narrow"},{"name":"Senior-Loken syndrome 6","type":"narrow"},{"name":"Senior-Loken syndrome caused by mutation in CEP290","type":"narrow"},{"name":"Senior-Loken syndrome type 6","type":"narrow"},{"name":"amaurosis congenita of Leber, type 10","type":"narrow"}],"termid":"MONDO:0100451","xrefs":{"Monarch":{"xref_id":"0100451"}}}


id: FYPO:0000515
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of nuclear import is decreased. Nuclear import is the directed movement of any substance into the nucleus; import of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased intracellular transport","termid":"FYPO:0000464"},{"relation_name":"is_a","term_name":"abnormal nuclear import","termid":"FYPO:0001217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased nuclear import","synonyms":[{"name":"decreased nuclear import during mitotic cell cycle","type":"related"},{"name":"decreased nuclear import during vegetative growth","type":"exact"},{"name":"nuclear import: decreased","type":"related"},{"name":"reduced nuclear import","type":"exact"}],"termid":"FYPO:0000515"}


id: GO:0047903
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-fructose + NADP+ = 5-dehydro-D-fructose + NADPH.","definition_xrefs":["MetaCyc:FRUCTOSE-5-DEHYDROGENASE-NADP+-RXN","EC:1.1.1.124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"fructose 5-dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:14069"],"synonyms":[{"name":"5-keto-D-fructose reductase (NADP+)","type":"related"},{"name":"5-ketofructose reductase (NADP(+)) activity","type":"related"},{"name":"5-ketofructose reductase (NADP)","type":"related"},{"name":"5-ketofructose reductase (NADP+) activity","type":"related"},{"name":"D-(-)fructose:(NADP+) 5-oxidoreductase activity","type":"related"},{"name":"D-fructose:NADP+ 5-oxidoreductase activity","type":"related"},{"name":"fructose 5-(nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"related"}],"termid":"GO:0047903"}


id: GO:0003364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell that contributes to the directed self-propelled movement of a mesendodermal cell.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellipodium assembly involved in ameboidal cell migration","termid":"GO:0003363"},{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"part_of","term_name":"cell migration involved in mesendoderm migration","termid":"GO:0090134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"lamellipodium assembly involved in mesendodermal cell migration","termid":"GO:0003364"}


id: GO:0039556
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to MDA-5, a cytoplasmic pattern recognition receptor that initiates an antiviral signaling pathway upon binding to viral dsRNA.","definition_xrefs":["PMID:19019954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"MDA-5 binding","synonyms":[{"name":"MDA5 binding","type":"exact"}],"termid":"GO:0039556"}


id: PBO:0082808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of yeast cortical actin cytoskeleton; binds and cross links actin filaments; originally identified by its homology to calponin (contains a calponin-like repeat) but the Scp1p domain structure is more similar to transgelin","termid":"PBO:0082808"}


id: PBO:0084882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial RNA polymerase specificity factor; has structural similarity to S-adenosylmethionine-dependent methyltransferases and functional similarity to bacterial sigma-factors; Mtf1p interacts with and stabilizes the Rpo41p-promoter complex, enhancing DNA bending and melting to facilitate pre-initiation open complex formation","termid":"PBO:0084882"}


id: GO:0035877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DED domain (death effector domain) of a protein, a homotypic protein interaction module composed of a bundle of six alpha-helices that is related in structure to the death domain (DD).","definition_xrefs":["GOC:ecd","InterPro:IPR001875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"death effector domain binding","synonyms":[{"name":"DED binding","type":"exact"}],"termid":"GO:0035877"}


id: PBO:0083006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Daughter cell-specific protein, may help establish daughter fate; relocalizes from bud neck to cytoplasm upon DNA replication stress; interacts with Csm1p","termid":"PBO:0083006"}


id: MONDO:0005631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Actinomycosis is a chronic bacterial infection that commonly affects the face and neck. It is usually caused by an anaerobic bacteria called Actinomyces israelii. Actinomyces are normal inhabitants of the mouth, gastrointestinal tract, and female genital tract, and do not cause an infection unless there is a break in the skin or mucosa. The infection usually occurs in the face and neck, but can sometimes occur in the chest, abdomen, pelvis, or other areas of the body. The infection is not contagious.","direct_ancestors":[{"relation_name":"is_a","term_name":"commensal bacterial infectious disease","termid":"MONDO:0000315"},{"relation_name":"is_a","term_name":"Actinomycetales infectious disease","termid":"MONDO:0006921"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actinomycosis","secondary_identifiers":["GARD:5728","ICD9:039.9","UMLS:C0001261","EFO:0007128","Orphanet:457095","SCTID:11817007","icd11.foundation:1697630330","DOID:8478","ICD9:039","MEDGEN:1733","MESH:D000196","NCIT:C34350"],"synonyms":[{"name":"Actinomyces infection","type":"exact"},{"name":"Actinomyces israeli","type":"related"},{"name":"Actinomycetes","type":"related"},{"name":"Keratoactinomycosis","type":"related"},{"name":"Madura foot due to Actinomadura","type":"exact"},{"name":"actinomycetoma","type":"related"},{"name":"actinomycotic madura foot","type":"exact"},{"name":"actinomycotic mycetema","type":"exact"},{"name":"actinomycotic mycetoma of foot","type":"exact"},{"name":"anaerobic Actinomyces infection","type":"related"},{"name":"boil","type":"related"},{"name":"canaliculitis","type":"related"},{"name":"infections, Actinomyces","type":"related"}],"termid":"MONDO:0005631","xrefs":{"Monarch":{"xref_id":"0005631"}}}


id: PBO:0000461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase D, Pld1","termid":"PBO:0000461"}


id: GO:0070619
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains Grb2, the adaptor protein Shc and the guanine nucleotide exchange factor Sos (or an ortholog thereof, such as mSos1), and is involved in linking EGFR activation to the p21-Ras pathway.","definition_xrefs":["GOC:mah","PMID:7970708","PMID:8940013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"Shc-Grb2-Sos complex","synonyms":[{"name":"Shc-Grb2-mSos1 complex, EGF stimulated","type":"narrow"}],"termid":"GO:0070619"}


id: PBO:0028234
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_methionine_and_purine","termid":"PBO:0028234"}


id: FYPO:0002000
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is inviable, and contains one nucleus and one or more septa. The nucleus is not in the normal location.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"inviable mononucleate vegetative cell","termid":"FYPO:0006430"},{"relation_name":"is_a","term_name":"septated mononucleate vegetative cell with mislocalized nucleus and anucleate compartment","termid":"FYPO:0007646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0000004","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"inviable septated mononucleate vegetative cell","secondary_identifiers":["FYPO:0005276"],"synonyms":[{"name":"cytokinesis in the absence of nuclear division","type":"related"},{"name":"cytokinesis without nuclear division","type":"related"},{"name":"inviable cell with cytokinesis in the absence of nuclear division","type":"related"},{"name":"inviable cell with cytokinesis without nuclear division","type":"related"},{"name":"inviable cell with premature septation","type":"related"},{"name":"inviable cell with septation in the absence of nuclear division","type":"related"},{"name":"inviable cell with septation independent of mitosis","type":"related"},{"name":"inviable cell with septation without nuclear division","type":"related"},{"name":"inviable septated mononucleate cell","type":"exact"},{"name":"inviable septated mononucleate cell during vegetative growth","type":"exact"},{"name":"inviable septated mononucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable septated mononucleate vegetative cell with mislocalized nucleus","type":"exact"},{"name":"lethal; septated mononucleate vegetative cell","type":"exact"},{"name":"septation in the absence of nuclear division","type":"related"},{"name":"septation independent of mitosis","type":"related"},{"name":"septation without nuclear division","type":"related"}],"termid":"FYPO:0002000"}


id: MONDO:0000180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inflammatory skin and bowel disease, neonatal (obsolete MONDO:0000180)","termid":"MONDO:0000180","xrefs":{"Monarch":{"xref_id":"0000180"}}}


id: MONDO:1011689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemolytic anemia, non-human animal","secondary_identifiers":["OMIA:000430"],"termid":"MONDO:1011689","xrefs":{"Monarch":{"xref_id":"1011689"}}}


id: MONDO:0012198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by the association of the features of Waardenburg-Shah syndrome (WSS) (sensorineural hearing loss, pigmentary abnormalities and Hirschsprung disease) with neurological features, namely, neonatal hypotonia, intellectual deficit (of variable severity), nystagmus, progressive spasticity, ataxia and epilepsy.","definition_xrefs":["Orphanet:163746"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"excluded_subClassOf","term_name":"hypopigmentation of the skin","termid":"MONDO:0019290"},{"relation_name":"excluded_subClassOf","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"excluded_subClassOf","term_name":"intestinal motility disease","termid":"MONDO:0021189"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"PCWH syndrome","secondary_identifiers":["DOID:0090111","NANDO:2201298","MESH:C563789","OMIM:609136","UMLS:C1836727","GARD:17004","NANDO:1200586","MEDGEN:373160"],"synonyms":[{"name":"PCWH","type":"exact"},{"name":"WS4 plus","type":"exact"},{"name":"Waardenburg-Shah syndrome, neurologic variant","type":"related"},{"name":"neurologic Waardenburg-Shah syndrome","type":"exact"},{"name":"peripheral demyelinating neuropathy, central dysmyelination, Waardenburg syndrome, and Hirschsprung disease","type":"exact"},{"name":"peripheral demyelinating neuropathy-central dysmyelinating leukodystrophy-Hirschsprung disease-Waardenburg syndrome","type":"exact"},{"name":"peripheral demyelinating neuropathy-central dysmyelinating leukodystrophy-Waardenburg syndrome-Hirschsprung disease","type":"related"}],"termid":"MONDO:0012198","xrefs":{"Monarch":{"xref_id":"0012198"}}}


id: GO:0032142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a single guanine insertion or a deletion that results in an unpaired guanine.","definition_xrefs":["GOC:mah","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single base insertion or deletion binding","termid":"GO:0032138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"single guanine insertion binding","termid":"GO:0032142"}


id: PBO:0026760
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_degradation_during_cellular_response_to_UV","termid":"PBO:0026760"}


id: PBO:0066087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS p21 protein activator 1","termid":"PBO:0066087"}


id: GO:0050654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chondroitin sulfate proteoglycans, which consist of a core protein linked to a chondroitin sulfate glycosaminoglycan. The chondroitin sulfate chain is composed of the repeating disaccharide unit beta-(1,4)-D-glucuronic acid-beta-(1,3)-N-acetyl-D-galactosamine, the latter of which can be O-sulfated.","definition_xrefs":["PMID:17239763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan metabolic process","termid":"GO:0006029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondroitin sulfate proteoglycan metabolic process","synonyms":[{"name":"chondroitin sulfate proteoglycan metabolism","type":"exact"},{"name":"chondroitin sulphate proteoglycan metabolic process","type":"exact"},{"name":"chondroitin sulphate proteoglycan metabolism","type":"exact"}],"termid":"GO:0050654"}


id: GO:0018849
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-dihydro-5-oxofuran-2-acetate = cis,cis-hexadienedioate.","definition_xrefs":["RHEA:30031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"muconate cycloisomerase activity","secondary_identifiers":["EC:5.5.1.1","MetaCyc:MUCONATE-CYCLOISOMERASE-RXN"],"synonyms":[{"name":"cis,cis-muconate cycloisomerase activity","type":"related"},{"name":"cis,cis-muconate-lactonizing enzyme","type":"related"},{"name":"muconate cycloisomerase I activity","type":"related"},{"name":"muconate lactonizing enzyme I activity","type":"related"},{"name":"muconate lactonizing enzyme activity","type":"related"}],"termid":"GO:0018849"}


id: PBO:0080930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 8","termid":"PBO:0080930"}


id: FYPO:0001873
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mating projection assembly takes place despite the absence of cells of the opposite mating type.","definition_xrefs":["PomBase:mah","PMID:1905818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo formation","termid":"FYPO:0000568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"shmoo formation in absence of opposite mating type","synonyms":[{"name":"conjugation tube formation in absence of opposite mating type","type":"related"},{"name":"mating projection assembly in absence of opposite mating type","type":"exact"},{"name":"mating projection formation in absence of opposite mating type","type":"exact"},{"name":"shmoo without partner cell","type":"broad"}],"termid":"FYPO:0001873"}


id: MONDO:1010512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in pigs in which the cause of the disease is a mutation in the SGCD gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, pig","termid":"MONDO:1010460"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic cardiomyopathy, SGCD-related, pig","secondary_identifiers":["OMIA:002211-9823"],"termid":"MONDO:1010512","xrefs":{"Monarch":{"xref_id":"1010512"}}}


id: GO:0106035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of an assembled 4Fe-4S] cluster from a scaffold protein to an acceptor protein that contributes to the attainment of the full functional capacity of a protein.","definition_xrefs":["PMID:23615440"],"gene_count":0,"genotype_count":0,"name":"obsolete protein maturation by [4Fe-4S] cluster transfer (obsolete GO:0106035)","termid":"GO:0106035"}


id: GO:0050584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: linoleate + O2 = (9Z,11S,12Z)-11-hydroperoxyoctadeca-9,12-dienoate.","definition_xrefs":["EC:1.13.11.45","RHEA:18993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"linoleate 11-lipoxygenase activity","secondary_identifiers":["KEGG_REACTION:R05718","MetaCyc:1.13.11.45-RXN"],"synonyms":[{"name":"linoleate dioxygenase activity","type":"related"},{"name":"linoleate:oxygen 11S-oxidoreductase activity","type":"related"},{"name":"manganese lipoxygenase activity","type":"related"}],"termid":"GO:0050584"}


id: PBO:0084561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane-binding component of the CORVET complex; involved in endosomal vesicle tethering and fusion in the endosome to vacuole protein targeting pathway; interacts with Vps21p; contains RING finger motif","termid":"PBO:0084561"}


id: PBO:0031844
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytoskeleton_morphology_during_vegetative_growth","termid":"PBO:0031844"}


id: PBO:0055760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA activated by TGF-beta","termid":"PBO:0055760"}


id: GO:0009187
data:
  {"annotated_genes":["SJAG_02481","SJAG_01428"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102981],"is_not":false,"summary":null,"term":"GO:0009187"},{"annotations":[118383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01428":null,"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cyclic nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cyclic nucleotide metabolism","type":"exact"}],"termid":"GO:0009187","terms_by_termid":{"GO:0006198":null,"GO:0009187":null}}


id: FYPO:0000979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing miconazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000003","FYPO:0002057","FYPO:0000257","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on miconazole","synonyms":[{"name":"normal cell population growth on miconazole","type":"exact"},{"name":"normal vegetative cell population growth on miconazole","type":"exact"}],"termid":"FYPO:0000979"}


id: PBO:0008071
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae KEX2","termid":"PBO:0008071"}


id: GO:1990796
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized region of the axon terminus portion of a photoreceptor cell axon. A photoreceptor cell is a neuron specialized to detect and transduce light.","definition_xrefs":["PMID:19883736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal bouton","termid":"GO:0043195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"photoreceptor cell terminal bouton","termid":"GO:1990796"}


id: PBO:0045067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG5 antisense RNA 1","termid":"PBO:0045067"}


id: PBO:0004399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L27/L28","termid":"PBO:0004399"}


id: MONDO:0013793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalomyopathy, mitochondrial, due to voltage-dependent anion channel deficiency","secondary_identifiers":["OMIM:614520","UMLS:C3281106","MEDGEN:482736"],"synonyms":[{"name":"encephalomyopathy, mitochondrial, due to voltage-dependent anion channel deficiency","type":"exact"}],"termid":"MONDO:0013793","xrefs":{"Monarch":{"xref_id":"0013793"}}}


id: PBO:0086837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein predicted to have carbon-sulfur lyase activity; transcriptionally regulated by Upc2p via an upstream sterol response element; green fluorescent protein (GFP)-fusion protein localizes to the nucleus and the cytoplasm; not an essential gene; YML082W has a paralog, STR2, that arose from the whole genome duplication","termid":"PBO:0086837"}


id: PBO:0083500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YOR083W","termid":"PBO:0083500"}


id: MOD:01383
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-cysteine residues and oxidizes a sulfur to form L-cystine S-oxide.","definition_xrefs":["RESID:AA0457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disulfide crosslinked residues","termid":"MOD:00689"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cystine S-oxide","synonyms":[{"name":"(2R)-2-amino-3-[([(2R)-2-amino-2-carboxyethyl]sulfanyl)sulfinyl]propanoic acid","type":"exact"},{"name":"CROSSLNK S-cysteinyl 3-(oxidosulfanyl)alanine (Cys-Cys)","type":"exact"},{"name":"L-cystine S-oxide","type":"exact"},{"name":"S-[(2R)-2-amino-3-oxopropyl] (2R)-2-amino-3-oxopropane-1-sulfinothioate","type":"exact"},{"name":"S-cysteinyl 3-(oxidosulfanyl)alanine","type":"exact"},{"name":"cystine sulfoxide","type":"exact"}],"termid":"MOD:01383"}


id: GO:0044534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of apoptosis in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:17983639"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in modulation of apoptotic process in another organism (obsolete GO:0044534)","synonyms":[{"name":"envenomation resulting in modulation of apoptotic process in other organism","type":"exact"}],"termid":"GO:0044534"}


id: GO:0046130
data:
  {"annotated_genes":["SJAG_02580","SJAG_02959"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89442,89443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any purine ribonucleoside, a nucleoside in which purine base is linked to a ribose (beta-D-ribofuranose) molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside catabolic process","termid":"GO:0006152"},{"relation_name":"is_a","term_name":"ribonucleoside catabolic process","termid":"GO:0042454"},{"relation_name":"is_a","term_name":"purine ribonucleoside metabolic process","termid":"GO:0046128"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02580":null,"SJAG_02959":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine ribonucleoside catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine ribonucleoside breakdown","type":"exact"},{"name":"purine ribonucleoside catabolism","type":"exact"},{"name":"purine ribonucleoside degradation","type":"exact"}],"termid":"GO:0046130","terms_by_termid":{"GO:0006154":null}}


id: PBO:0003303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme Ubc4","termid":"PBO:0003303"}


id: PBO:0028842
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-heterochromatin_assembly_beyond_boundary_element_IRC1R","termid":"PBO:0028842"}


id: GO:0099573
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The post-synaptic specialization of a glutamatergic excitatory synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic density","termid":"GO:0014069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"glutamatergic postsynaptic density","synonyms":[{"name":"postsynaptic specialization, glutamatergic neuron-to-neuron synapse","type":"exact"}],"termid":"GO:0099573"}


id: MONDO:0017834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypereosinophilic syndrome","termid":"MONDO:0015691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0005267"],"is_obsolete":false,"name":"secondary hypereosinophilic syndrome","secondary_identifiers":["MEDGEN:1814441","GARD:21396","Orphanet:314962","UMLS:C5679897"],"synonyms":[{"name":"HES-R","type":"exact"},{"name":"reactive hypereosinophilic syndrome","type":"exact"},{"name":"secondary HES","type":"exact"}],"termid":"MONDO:0017834","xrefs":{"Monarch":{"xref_id":"0017834"}}}


id: PBO:0025457
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"changed from ncRNA to protein 20151128","termid":"PBO:0025457"}


id: GO:0004978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with corticotropin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocortin receptor activity","termid":"GO:0004977"},{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"corticotropin receptor activity","synonyms":[{"name":"ACTH receptor activity","type":"exact"},{"name":"adrenocorticotropic hormone receptor activity","type":"exact"},{"name":"adrenocorticotropin receptor activity","type":"exact"}],"termid":"GO:0004978"}


id: MONDO:0010088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple sulfatase deficiency (MSD) is a very rare and fatal lysosomal storage disease characterized by a clinical phenotype that combines the features of different sulfatase deficiencies (whether lysosomal or not) that can have neonatal (most severe), infantile (most common) and juvenile (rare) presentations with manifestations including hypotonia, coarse facial features, mild deafness, skeletal anomalies, ichthyosis, hepatomegaly, developmental delay, progressive neurologic deterioration and hydrocephalus.","definition_xrefs":["Orphanet:585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"sphingolipidosis","termid":"MONDO:0019255"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0002561"],"is_obsolete":false,"name":"mucosulfatidosis","secondary_identifiers":["NANDO:1200083","NCIT:C84908","UMLS:C0268263","DOID:0050441","NANDO:1200624","NANDO:2200566","NORD:1471","GARD:5061","SCTID:54898003","MESH:D052517","OMIM:272200","MEDGEN:75664","icd11.foundation:848083807"],"synonyms":[{"name":"MSD","type":"exact"},{"name":"Multiple Sulfatase Deficiency","type":"exact"},{"name":"juvenile sulfatidosis","type":"related"},{"name":"juvenile sulfatidosis, Austin type","type":"exact"},{"name":"mucosulfatidosis","type":"exact"},{"name":"multiple sulfatase deficiency","type":"related"},{"name":"multiple sulfatase deficiency disease","type":"exact"},{"name":"sulfatidosis juvenile, Austin type","type":"related"},{"name":"sulfatidosis, juvenile, Austin type","type":"exact"}],"termid":"MONDO:0010088","xrefs":{"Monarch":{"xref_id":"0010088"}}}


id: MONDO:0005205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete systemic lupus erythematosus (obsolete MONDO:0005205)","termid":"MONDO:0005205","xrefs":{"Monarch":{"xref_id":"0005205"}}}


id: PBO:0063821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology like domain family B member 3","termid":"PBO:0063821"}


id: GO:0001117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a protein-DNA-RNA complex into its constituent components.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA-RNA complex organization","termid":"GO:0001115"},{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-DNA-RNA complex disassembly","termid":"GO:0001117"}


id: GO:0031824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1E serotonin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 1E serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 1E receptor binding","type":"exact"},{"name":"type 1E serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031824"}


id: PBO:0060138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melatonin receptor 1B","termid":"PBO:0060138"}


id: PBO:0000751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine-5-)-methyltransferase (predicted)","termid":"PBO:0000751"}


id: GO:2000426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic cell clearance.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phagocytosis","termid":"GO:0050765"},{"relation_name":"is_a","term_name":"regulation of apoptotic cell clearance","termid":"GO:2000425"},{"relation_name":"negatively_regulates","term_name":"apoptotic cell clearance","termid":"GO:0043277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptotic cell clearance","synonyms":[{"name":"negative regulation of apoptotic cell removal","type":"exact"},{"name":"negative regulation of efferocytosis","type":"exact"},{"name":"negative regulation of programmed cell clearance","type":"exact"}],"termid":"GO:2000426"}


id: GO:0010031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organismal movement by which the tip of a plant organ follows a spiral pattern as a consequence of growth.","definition_xrefs":["ISBN:0192801023","GOC:mtg_MIT_16mar07"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal movement","termid":"GO:0050879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circumnutation","termid":"GO:0010031"}


id: PBO:0077005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 7","termid":"PBO:0077005"}


id: SO:1001255
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1001255 status_of_coding_sequence (obsolete SO:1001255)","termid":"SO:1001255"}


id: PATO:0002267
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edge shape","termid":"PATO:0002267"}


id: PBO:0058573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6511b-1","termid":"PBO:0058573"}


id: GO:1901533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hematopoietic progenitor cell differentiation.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901532"},{"relation_name":"negatively_regulates","term_name":"hematopoietic progenitor cell differentiation","termid":"GO:0002244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hematopoietic progenitor cell differentiation","synonyms":[{"name":"down regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"down regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"down regulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"down regulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"down-regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"down-regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"down-regulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"down-regulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"downregulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"downregulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"downregulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"downregulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"inhibition of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"inhibition of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"inhibition of hematopoietic progenitor cell differentiation","type":"related"},{"name":"inhibition of hemopoietic progenitor cell differentiation","type":"narrow"},{"name":"negative regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"negative regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"negative regulation of hemopoietic progenitor cell differentiation","type":"exact"}],"termid":"GO:1901533"}


id: GO:0048235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a haploid sperm cell within the plant gametophyte.","definition_xrefs":["GOC:jid","CL:0000366","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"male gamete generation","termid":"GO:0048232"},{"relation_name":"part_of","term_name":"microgametogenesis","termid":"GO:0055046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen sperm cell differentiation","secondary_identifiers":["GO:0048234"],"synonyms":[{"name":"male gamete generation","type":"broad"},{"name":"male gametophyte sperm cell differentiation","type":"exact"},{"name":"sperm cell differentiation","type":"broad"}],"termid":"GO:0048235"}


id: PATO:0000399
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000399 life span value (obsolete PATO:0000399)","termid":"PATO:0000399"}


id: GO:0046186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of acetaldehyde, a colorless, flammable liquid intermediate in the metabolism of alcohol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetaldehyde metabolic process","termid":"GO:0006117"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetaldehyde biosynthetic process","synonyms":[{"name":"acetaldehyde anabolism","type":"exact"},{"name":"acetaldehyde biosynthesis","type":"exact"},{"name":"acetaldehyde formation","type":"exact"},{"name":"acetaldehyde synthesis","type":"exact"}],"termid":"GO:0046186"}


id: PBO:0041525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 86","termid":"PBO:0041525"}


id: GO:0007211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by octopamine or tyramine binding to their receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription, and ending with the regulation of a downstream cellular process. Octopamine and tyramine are decarboxylation products of tyrosine, and are the invertebrate counterparts of the vertebrate adrenergic transmitters.","definition_xrefs":["GOC:mah","PMID:15355245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"octopamine or tyramine signaling pathway","synonyms":[{"name":"octopamine or tyramine signalling pathway","type":"exact"},{"name":"octopamine/tyramine signaling pathway","type":"exact"}],"termid":"GO:0007211"}


id: MONDO:0014599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the COL4A3BP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 34","secondary_identifiers":["MEDGEN:907277","OMIM:616351","UMLS:C4225156","DOID:0070064"],"synonyms":[{"name":"COL4A3BP autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"MRD34","type":"exact"},{"name":"autosomal dominant intellectual disability 34","type":"exact"},{"name":"autosomal dominant mental retardation 34","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 34","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in COL4A3BP","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 34","type":"exact"},{"name":"intellectual disability, autosomal dominant 34","type":"exact"},{"name":"intellectual disability, autosomal dominant type 34","type":"exact"},{"name":"mental retardation, autosomal dominant 34","type":"related"},{"name":"mental retardation, autosomal dominant type 34","type":"exact"}],"termid":"MONDO:0014599","xrefs":{"Monarch":{"xref_id":"0014599"}}}


id: GO:0052368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of cellular components of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete disruption by organism of cellular component in other organism involved in symbiotic interaction (obsolete GO:0052368)","synonyms":[{"name":"catabolism of cellular component in other organism","type":"exact"},{"name":"catabolism of structural constituent in other organism","type":"exact"},{"name":"degradation of cellular component in other organism","type":"exact"},{"name":"disassembly by organism of cellular component in other organism during symbiotic interaction","type":"related"},{"name":"disassembly by organism of cellular component in other organism involved in symbiotic interaction","type":"related"}],"termid":"GO:0052368"}


id: MONDO:0019190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Juvenile polyposis of infancy (JPI) is the most severe form of juvenile gastrointestinal polyposis and is characterized by pancolonic hamartomatous polyposis from stomach to rectum, diagnosed in the first two years of life.","definition_xrefs":["Orphanet:79076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile polyposis syndrome","termid":"MONDO:0017380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"juvenile polyposis of infancy","secondary_identifiers":["MEDGEN:1778573","GARD:16696","icd11.foundation:378686036","UMLS:C5445164"],"synonyms":[{"name":"infantile juvenile polyposis syndrome","type":"exact"},{"name":"infantile onset juvenile polyposis syndrome","type":"exact"},{"name":"juvenile polyposis syndrome of infancy","type":"exact"}],"termid":"MONDO:0019190","xrefs":{"Monarch":{"xref_id":"0019190"}}}


id: GO:0048092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of establishment of a pattern of pigment in males.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental pigmentation","termid":"GO:0048086"},{"relation_name":"is_a","term_name":"regulation of male pigmentation","termid":"GO:0048088"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"male pigmentation","termid":"GO:0048094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of male pigmentation","synonyms":[{"name":"down regulation of male pigmentation","type":"exact"},{"name":"down-regulation of male pigmentation","type":"exact"},{"name":"downregulation of male pigmentation","type":"exact"},{"name":"inhibition of male pigmentation","type":"narrow"}],"termid":"GO:0048092"}


id: GO:0080030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + methyl (indol-3-yl)acetate = (indol-3-yl)acetate + H+ + methanol.","definition_xrefs":["RHEA:32919","PMID:18467465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"methyl indole-3-acetate esterase activity","secondary_identifiers":["MetaCyc:RXN-10711"],"synonyms":[{"name":"MeIAA esterase activity","type":"exact"},{"name":"Methyl IAA esterase activity","type":"exact"},{"name":"indole-3-Acetic acid methyl ester esterase activity","type":"exact"}],"termid":"GO:0080030"}


id: PBO:0116772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGF-beta induced TARBP2 interacting lncRNA","termid":"PBO:0116772"}


id: PBO:0085957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutation suppresses cdc13-1 temperature sensitivity; (GFP)-fusion protein localizes to both the cytoplasm and the nucleus","termid":"PBO:0085957"}


id: GO:0003410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A 90 degree-rotation of the optic cup resulting in its alignment with the anterior-posterior body axis.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"camera-type eye development","termid":"GO:0043010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior rotation of the optic cup","termid":"GO:0003410"}


id: PBO:0055105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2523","termid":"PBO:0055105"}


id: GO:0006825
data:
  {"annotated_genes":["SJAG_01493","SJAG_04246","SJAG_04743","SJAG_03079","SJAG_00547","SJAG_03231","SJAG_02399","SJAG_01119"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106655],"is_not":false,"summary":null,"term":"GO:0006825"},{"annotations":[109811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060003"},{"annotations":[80449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015677"},{"annotations":[116589,89797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098705"},{"annotations":[103416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097430"},{"annotations":[69420,105718,62980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035434"}]},"cv_name":"biological_process","definition":"The directed movement of copper (Cu) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transport","termid":"GO:0000041"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00547":null,"SJAG_01119":null,"SJAG_01493":null,"SJAG_02399":null,"SJAG_03079":null,"SJAG_03231":null,"SJAG_04246":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"copper ion transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0006825","terms_by_termid":{"GO:0006825":null,"GO:0015677":null,"GO:0035434":null,"GO:0060003":null,"GO:0097430":null,"GO:0098705":null}}


id: GO:0052613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: canthaxanthin + a reduced electron acceptor + oxygen = adonirubin + an oxidized electron acceptor + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete canthaxanthin 3-hydroxylase activity (obsolete GO:0052613)","synonyms":[{"name":"beta-carotene hydroxylase activity","type":"broad"},{"name":"carotene beta-ring hydroxylase activity","type":"broad"}],"termid":"GO:0052613"}


id: SO:0001486
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The status of a whole genome sequence, where the data is minimally filtered or un-filtered, from any number of sequencing platforms, and is assembled into contigs. Genome sequence of this quality may harbour regions of poor quality and can be relatively incomplete.","definition_xrefs":["DOI:10.1126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"whole_genome_sequence_status","termid":"SO:0001499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"standard_draft","synonyms":[{"name":"standard draft","type":"exact"}],"termid":"SO:0001486"}


id: PBO:0031229
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ergosterol_biosynthetic_process","termid":"PBO:0031229"}


id: PBO:0055485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2918","termid":"PBO:0055485"}


id: GO:0090712
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The end of the outer hair cell which receives and transmits neural signals.","definition_xrefs":["GOC:sl","PMID:12845523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell pole","termid":"GO:0060187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal pole of outer hair cell","termid":"GO:0090712"}


id: PBO:0052175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 5","termid":"PBO:0052175"}


id: FYPO:0005084
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at ribosomal RNA (rRNA) genes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21151114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at ncRNA gene","termid":"FYPO:0005083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to chromatin at rRNA gene","synonyms":[{"name":"normal protein localisation to chromatin at rRNA gene","type":"exact"},{"name":"normal protein localization to chromatin at rDNA","type":"exact"},{"name":"normal protein localization to chromatin at rRNA gene during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at rRNA gene during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at ribosomal DNA","type":"exact"}],"termid":"FYPO:0005084"}


id: FYPO:0005394
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which vegetative cell population growth is slower than normal for several generations, with the population growth rate decreasing over successive generations, after which the population resumes growing at a normal or near-normal rate.","definition_xrefs":["PMID:12196391","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"progressively decreasing vegetative cell population growth rate","termid":"FYPO:0005393"},{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"has_part","termid":"FYPO:0002057"},{"rel_name":"has_part","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000003","FYPO:0000139","FYPO:0002057","FYPO:0002058","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"progressively decreasing vegetative cell population growth rate followed by return to normal growth rate","synonyms":[{"name":"emergence of telomerase-deficient survivors","type":"related"},{"name":"progressively decreasing cell population growth rate followed by return to normal growth rate during vegetative growth","type":"exact"},{"name":"progressively decreasing cell population proliferation followed by return to normal proliferation","type":"related"},{"name":"progressively decreasing cell proliferation followed by return to normal proliferation","type":"related"},{"name":"progressively reduced cell proliferation followed by return to normal proliferation","type":"related"},{"name":"progressively reduced vegetative cell population growth rate followed by return to normal growth rate","type":"exact"}],"termid":"FYPO:0005394"}


id: PBO:0031405
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_cell","termid":"PBO:0031405"}


id: PBO:0045832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 22","termid":"PBO:0045832"}


id: MONDO:0016562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PSP-Pure akinesia with gait freezing (PSP-PAGF) is an atypical variant of progressive supranuclear palsy (PSP), a rare late-onset neurodegenerative disease.","definition_xrefs":["Orphanet:240094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atypical progressive supranuclear palsy syndrome","termid":"MONDO:0020488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"progressive supranuclear palsy-pure akinesia with gait freezing syndrome","secondary_identifiers":["GARD:20647","UMLS:C5679851","MEDGEN:1843032"],"synonyms":[{"name":"PSP-PAGF","type":"exact"},{"name":"PSP-pure akinesia with gait freezing","type":"exact"}],"termid":"MONDO:0016562","xrefs":{"Monarch":{"xref_id":"0016562"}}}


id: PBO:0072991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCMH1 divergent transcript","termid":"PBO:0072991"}


id: MONDO:0008785
data:
  {"annotated_genes":["SJAG_04984"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88207],"is_not":false,"summary":null,"term":"MONDO:0008785"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive sideroblastic anemia","termid":"MONDO:0016828"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0006025","MONDO:0002280"],"is_obsolete":false,"name":"sideroblastic anemia 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4225425","OMIM:205950","DOID:0060065","MESH:C567145","MEDGEN:899109","GARD:18381"],"synonyms":[{"name":"SIDBA2","type":"related"},{"name":"anemia, sideroblastic, 2, pyridoxine-refractory","type":"related"},{"name":"anemia, sideroblastic, pyridoxine-refractory, autosomal recessive","type":"related"},{"name":"pyridoxine refractory sideroblastic anaemia","type":"related"},{"name":"pyridoxine refractory sideroblastic anemia","type":"related"},{"name":"sideroblastic anaemia pyridoxine-refractory autosomal recessive","type":"related"},{"name":"sideroblastic anemia pyridoxine-refractory autosomal recessive","type":"related"}],"termid":"MONDO:0008785","terms_by_termid":{"MONDO:0008785":null},"xrefs":{"Monarch":{"xref_id":"0008785"}}}


id: GO:0102318
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-deoxystreptamine + UDP-alpha-D-glucose = 2'-deamino-2'-hydroxyparomamine + UDP(3-) + H+.","definition_xrefs":["EC:2.4.1.284","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"2-deoxystreptamine glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13121","RHEA:34063"],"termid":"GO:0102318"}


id: MONDO:0957260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"combined low LDL and fibrinogen","secondary_identifiers":["MEDGEN:1841120","OMIM:620364","UMLS:C5830484"],"termid":"MONDO:0957260","xrefs":{"Monarch":{"xref_id":"0957260"}}}


id: GO:0010256
data:
  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id: MOD:00176
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id: GO:0070063
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id: PBO:0062836
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex subunit pseudogene 2","termid":"PBO:0062836"}


id: PBO:0005309
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Dim1","termid":"PBO:0005309"}


id: PR:O14036
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A small nuclear ribonucleoprotein Sm D2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12777:SF0","PRO:DNx","OMA:SCHPO01766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein Sm D2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.03c","secondary_identifiers":["UniProtKB:O14036"],"synonyms":[{"name":"Sm-D2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SNRPD2","type":"exact"},{"name":"complexed with cdc5 protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"snRNP core protein D2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14036"}


id: MONDO:0700141
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Melanoma occurring in a dog. It is the most common malignant tumor found in the mouths of dogs and also occurs frequently on the digits. All canine melanomas are locally invasive and malignant canine melanomas show a high rate of metastasis. Melanoma in dogs has been established as a relevant model for human melanoma.","definition_xrefs":["NCIT:C120298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanoma, non-human animal","termid":"MONDO:0700132"},{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine melanoma","termid":"MONDO:0700141","xrefs":{"Monarch":{"xref_id":"0700141"}}}


id: GO:0048809
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of analia are generated and organized. The analia is the posterior-most vertral appendage that develops from the genital disc. An example of this process is analia morphogenesis in Drosophila melanogaster.","definition_xrefs":["GOC:ai","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"genital disc morphogenesis","termid":"GO:0007483"},{"relation_name":"part_of","term_name":"analia development","termid":"GO:0007487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"analia morphogenesis","termid":"GO:0048809"}


id: MONDO:0011731
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glucose-galactose malabsorption (GGM) is a very rare, potentially lethal, genetic metabolic disease characterized by impaired glucose-galactose absorption resulting in severe watery diarrhea and dehydration with onset inthe neonatal period.","definition_xrefs":["Orphanet:35710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"glucose transport disorder","termid":"MONDO:0019226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0037792"],"is_obsolete":false,"name":"glucose-galactose malabsorption","secondary_identifiers":["ICD9:271.3","NANDO:2200909","NORD:1190","SCTID:190749000","UMLS:C0268186","MESH:C562602","GARD:6521","MEDGEN:78647","MedDRA:10066388","OMIM:606824","icd11.foundation:2108415931","DOID:0070563"],"synonyms":[{"name":"Complex carbohydrate intolerance","type":"related"},{"name":"GGM","type":"related"},{"name":"SGLT1 deficiency","type":"exact"},{"name":"carbohydrate intolerance of glucose galactose","type":"related"},{"name":"glucose galactose malabsorption deficiency","type":"related"},{"name":"glucose-galactose malabsorption","type":"exact"},{"name":"glucose/galactose malabsorption","type":"related"},{"name":"monosaccharide malabsorption","type":"related"}],"termid":"MONDO:0011731","xrefs":{"Monarch":{"xref_id":"0011731"}}}


id: PBO:0067590
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 751, pseudogene","termid":"PBO:0067590"}


id: PATO:0001073
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  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001073 relative impulse (obsolete PATO:0001073)","termid":"PATO:0001073"}


id: GO:0018951
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving p-xylene, (1,4-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylene metabolic process","termid":"GO:0018948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"p-xylene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:pxy"],"synonyms":[{"name":"p-xylene metabolism","type":"exact"},{"name":"para-xylene metabolic process","type":"exact"},{"name":"para-xylene metabolism","type":"exact"}],"termid":"GO:0018951"}


id: PBO:0051569
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 15","termid":"PBO:0051569"}


id: GO:0050398
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a wax ester + H2O = a long-chain alcohol + a long-chain carboxylate.","definition_xrefs":["MetaCyc:WAX-ESTER-HYDROLASE-RXN","EC:3.1.1.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"wax-ester hydrolase activity","secondary_identifiers":["RHEA:13577"],"synonyms":[{"name":"WEH","type":"related"},{"name":"jojoba wax esterase","type":"narrow"},{"name":"wax-ester acylhydrolase activity","type":"related"}],"termid":"GO:0050398"}


id: PBO:0028705
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_damage","termid":"PBO:0028705"}


id: MONDO:0011805
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited susceptibility to asthma in which the cause of the disease is a mutation in the PTGDR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to asthma","termid":"MONDO:0010940"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma-related traits, susceptibility to, 1","secondary_identifiers":["UMLS:C1846534","MEDGEN:339547","OMIM:607277"],"synonyms":[{"name":"AS1","type":"related"},{"name":"ASRT1","type":"related"},{"name":"PTGDR inherited susceptibility to asthma","type":"exact"},{"name":"asthma, susceptibility to, 1","type":"exact"},{"name":"asthma-related traits, susceptibility to, 1","type":"exact"},{"name":"asthma-related traits, susceptibility to, type 1","type":"exact"},{"name":"inherited susceptibility to asthma caused by mutation in PTGDR","type":"exact"}],"termid":"MONDO:0011805","xrefs":{"Monarch":{"xref_id":"0011805"}}}


id: PBO:0028795
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_at_mating-type_region_replication_fork_barrier","termid":"PBO:0028795"}


id: PBO:0001479
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane anchored protein Mac1","termid":"PBO:0001479"}


id: GO:1902641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process.","definition_xrefs":["GOC:di","PMID:22562153","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid catabolic process","termid":"GO:0060696"},{"relation_name":"regulates","term_name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","termid":"GO:1902634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","synonyms":[{"name":"regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"}],"termid":"GO:1902641"}


id: FYPO:0004069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the serine residue at position 2 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II does not occur.","definition_xrefs":["GO:0071619","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished phosphorylation of RNA polymerase II C-terminal domain serine 2 residues","synonyms":[{"name":"abolished phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during mitotic cell cycle","type":"related"},{"name":"abolished phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during vegetative growth","type":"exact"},{"name":"abolished phosphorylation of RNA polymerase II CTD serine 2 residues","type":"exact"},{"name":"phosphorylation of RNA polymerase II C-terminal domain serine 2 residues abolished","type":"exact"}],"termid":"FYPO:0004069"}


id: PBO:0086969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit for the plasma membrane H(+)-ATPase Pma1p; small single-membrane span proteolipid; forms unique helix and positively charged cytoplasmic domain that is able to specifically segregate phosphatidylserines; PMP1 has a paralog, PMP2, that arose from the whole genome duplication","termid":"PBO:0086969"}


id: PBO:0081274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 37C, pseudogene","termid":"PBO:0081274"}


id: PBO:0091881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"class I glutamine amidotransferase family protein","termid":"PBO:0091881"}


id: PBO:0004977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ type DNA helicase Tlh1","termid":"PBO:0004977"}


id: PBO:0004512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-1-tetrahydrofolatesynthase/methylenetetrahydrofolatedehydrogenase/methylenetetrahydrofolatecyclohydrolase/ formyltetrahydrofolatesynthetase (predicted)","termid":"PBO:0004512"}


id: MONDO:0000698
data:
  {"annotated_genes":["SJAG_03434","SJAG_03293","SJAG_00674"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013166"},{"annotations":[87015,87016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010083"}]},"cv_name":"mondo","definition":"An amino acid metabolic disorder characterized by impairment of the GABA catabolic pathway.","definition_xrefs":["DOID:0060176","PMID:12891648"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00674":null,"SJAG_03293":null,"SJAG_03434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"gamma-amino butyric acid metabolism disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842586","icd11.foundation:1811657969","UMLS:C4702813","Orphanet:79175","GARD:18955"],"termid":"MONDO:0000698","terms_by_termid":{"MONDO:0010083":null,"MONDO:0013166":null},"xrefs":{"Monarch":{"xref_id":"0000698"}}}


id: MONDO:0012234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete LFS3 (obsolete MONDO:0012234)","termid":"MONDO:0012234","xrefs":{"Monarch":{"xref_id":"0012234"}}}


id: PBO:0043756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX7C pseudogene 4","termid":"PBO:0043756"}


id: PBO:0070512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 11","termid":"PBO:0070512"}


id: PBO:0072645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTF1 homolog, Paf1/RNA polymerase II complex component","termid":"PBO:0072645"}


id: MONDO:0021697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the genus CHLAMYDIA.","definition_xrefs":["MESH:D002690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial sexually transmitted disease","termid":"MONDO:0005323"},{"relation_name":"is_a","term_name":"chlamydiaceae infections","termid":"MONDO:0020776"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chlamydia infectious disease","secondary_identifiers":["MESH:D023521","ICD10CM:A70-A74","EFO:1000863"],"synonyms":[{"name":"Chlamydia caused disease or disorder","type":"exact"},{"name":"Chlamydia disease or disorder","type":"exact"},{"name":"Chlamydia infection","type":"related"},{"name":"Chlamydia infectious disease","type":"exact"},{"name":"Chlamydophila caused disease or disorder","type":"exact"},{"name":"Chlamydophila disease or disorder","type":"exact"},{"name":"chlamydia infectious disease","type":"exact"},{"name":"infection, Chlamydia","type":"related"},{"name":"infections, Chlamydia","type":"related"}],"termid":"MONDO:0021697","xrefs":{"Monarch":{"xref_id":"0021697"}}}


id: GO:0018807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-hydroxycyclohex-1-ene-1-carboxyl-CoA + H2O = 2,6-dihydroxycyclohexane-1-carboxyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds","termid":"GO:0016822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"6-hydroxycyclohex-1-ene-1-carboxyl-CoA hydratase activity","secondary_identifiers":["RHEA:39651","EC:3.7.1.21"],"termid":"GO:0018807"}


id: GO:0002421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"B cell antigen processing and presentation which is initiated by uptake of antigen via pinocytosis.","definition_xrefs":["PMID:7543530","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell antigen processing and presentation","termid":"GO:0002450"},{"relation_name":"is_a","term_name":"antigen processing and presentation following pinocytosis","termid":"GO:0002746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell antigen processing and presentation following pinocytosis","synonyms":[{"name":"B lymphocyte antigen processing and presentation following pinocytosis","type":"exact"},{"name":"B-cell antigen processing and presentation following pinocytosis","type":"exact"},{"name":"B-lymphocyte antigen processing and presentation following pinocytosis","type":"exact"}],"termid":"GO:0002421"}


id: FYPO:0003851
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing MTT (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002057","FYPO:0002058","FYPO:0000257","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on MTT","synonyms":[{"name":"normal cell population growth in presence of MTT","type":"exact"},{"name":"normal cell population growth on MTT","type":"exact"},{"name":"normal cellular response to MTT","type":"related"},{"name":"normal growth on 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide","type":"exact"},{"name":"normal vegetative cell population growth on MTT","type":"exact"}],"termid":"FYPO:0003851"}


id: PBO:0054062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1409","termid":"PBO:0054062"}


id: SO:0002206
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Identifies the biological source of the specified span of the sequence","definition_xrefs":["NCBI:tm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_attribute","termid":"SO:0000400"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_source","synonyms":[{"name":"INSDC_feature:source","type":"exact"},{"name":"sequence source","type":"exact"}],"termid":"SO:0002206"}


id: PBO:0062314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily W member 2","termid":"PBO:0062314"}


id: MONDO:1012655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disorder of sexual differentiation that occurs in cattle due to a mutation in the SRY gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"difference of sexual differentiation, non-human animal","termid":"MONDO:0700105"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XY sex reversal, SRY-related, cattle","secondary_identifiers":["OMIA:001230-9913"],"termid":"MONDO:1012655","xrefs":{"Monarch":{"xref_id":"1012655"}}}


id: PBO:0002733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall protein Gas1, 1,3-beta-glucanosyltransferase (predicted)","termid":"PBO:0002733"}


id: PBO:0043744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7A2 pseudogene 2","termid":"PBO:0043744"}


id: PBO:0081343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 143","termid":"PBO:0081343"}


id: GO:0047745
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chlorogenate + H2O = (-)-quinate + cis-caffeate + H+.","definition_xrefs":["RHEA:20689","EC:3.1.1.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"chlorogenate hydrolase activity","secondary_identifiers":["KEGG_REACTION:R02997","MetaCyc:CHLOROGENATE-HYDROLASE-RXN"],"synonyms":[{"name":"chlorogenase activity","type":"related"},{"name":"chlorogenic acid esterase activity","type":"related"}],"termid":"GO:0047745"}


id: PBO:0065711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parvalbumin","termid":"PBO:0065711"}


id: SO:1001273
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-canonical start codon of sequence CTG.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_canonical_start_codon","termid":"SO:0000680"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTG_start_codon","synonyms":[{"name":"CTG start codon","type":"exact"}],"termid":"SO:1001273"}


id: PBO:0074725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 80E","termid":"PBO:0074725"}


id: PBO:0002381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IPT/TIG ankyrin repeat containing transcription regulator of fatty acid biosynthesis (predicted)","termid":"PBO:0002381"}


id: PBO:0090772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer alpha subunit Cop1","termid":"PBO:0090772"}


id: MONDO:1012503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hydrallantois, non-human animal","termid":"MONDO:1011672"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrallantois, cattle","secondary_identifiers":["OMIA:002053-9913"],"termid":"MONDO:1012503","xrefs":{"Monarch":{"xref_id":"1012503"}}}


id: PBO:0006183
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_regulation_target","termid":"PBO:0006183"}


id: MONDO:0014426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nanophthalmia in which the cause of the disease is a mutation in the TMEM98 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nanophthalmia","termid":"MONDO:0005514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"nanophthalmos 4","secondary_identifiers":["UMLS:C4014848","MEDGEN:863285","OMIM:615972","GARD:18629"],"synonyms":[{"name":"NNO4","type":"related"},{"name":"Nanophthalmia 4","type":"related"},{"name":"TMEM98 nanophthalmia","type":"exact"},{"name":"nanophthalmia caused by mutation in TMEM98","type":"exact"},{"name":"nanophthalmos 4","type":"exact"},{"name":"nanophthalmos type 4","type":"exact"}],"termid":"MONDO:0014426","xrefs":{"Monarch":{"xref_id":"0014426"}}}


id: MONDO:0017453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Foetal parvovirus syndrome is a foetopathy likely to occur when a pregnant woman is infected by parvovirus B19. In adults, the virus causes a butterfly erythema infectiosum (also called Fifth Disease; 'slapped cheek disease') and flu-like symptoms with symmetric polyarthralgias, which usually do not warrant prenatal diagnosis.","definition_xrefs":["Orphanet:295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious embryofetopathy","termid":"MONDO:0016511"},{"relation_name":"is_a","term_name":"Parvoviridae infectious disease","termid":"MONDO:0025371"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal parvovirus syndrome","secondary_identifiers":["MESH:C536301","MEDGEN:443992","SCTID:715197005","UMLS:C2931167","GARD:4236","icd11.foundation:648536096"],"synonyms":[{"name":"Human parvovirus B19 caused infectious embryofetopathy","type":"exact"},{"name":"Human parvovirus B19 infectious embryofetopathy","type":"exact"},{"name":"Maternofetal infection by parvovirus","type":"related"},{"name":"Parvovirus B19 antenatal infection","type":"related"},{"name":"Parvovirus antenatal infection","type":"exact"},{"name":"fifth disease","type":"related"},{"name":"mother-to-child transmission of parvovirus syndrome","type":"exact"}],"termid":"MONDO:0017453","xrefs":{"Monarch":{"xref_id":"0017453"}}}


id: GO:0051116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + Co(2+) + H2O + hydrogenobyrinate a,c-diamide = ADP + cob(II)yrinate a,c diamide + 4 H+ + phosphate.","definition_xrefs":["EC:6.6.1.2","RHEA:15341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming nitrogen-metal bonds, forming coordination complexes","termid":"GO:0051003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"cobaltochelatase activity","secondary_identifiers":["MetaCyc:R342-RXN","KEGG_REACTION:R05227"],"synonyms":[{"name":"CobN-CobST","type":"related"},{"name":"CobNST","type":"narrow"},{"name":"hydrogenobyrinic acid a,c-diamide cobaltochelatase activity","type":"exact"},{"name":"hydrogenobyrinic-acid-a,c-diamide:cobalt cobalt-ligase (ADP-forming)","type":"related"}],"termid":"GO:0051116"}


id: PBO:0109631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neutrophil cytosolic factor 1B (pseudogene)","termid":"PBO:0109631"}


id: PBO:0050480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A9","termid":"PBO:0050480"}


id: GO:0019316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-allose, the D-enantiomer of allo-hexose, an aldohexose similar to glucose.","definition_xrefs":["GOC:ai","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-allose metabolic process","termid":"GO:0019314"},{"relation_name":"is_a","term_name":"hexose catabolic process","termid":"GO:0019320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"D-allose catabolic process","secondary_identifiers":["MetaCyc:PWY0-44"],"synonyms":[{"name":"D-allose breakdown","type":"exact"},{"name":"D-allose catabolism","type":"exact"},{"name":"D-allose degradation","type":"exact"}],"termid":"GO:0019316"}


id: PBO:0034025
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_approver_email","termid":"PBO:0034025"}


id: PBO:0050981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 43","termid":"PBO:0050981"}


id: GO:0010765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sodium ion transport","termid":"GO:0002028"},{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transport","termid":"GO:0043270"},{"relation_name":"positively_regulates","term_name":"sodium ion transport","termid":"GO:0006814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sodium ion transport","termid":"GO:0010765"}


id: MONDO:0003243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of hepatocellular carcinoma characterized by the presence of clear cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clear cell adenocarcinoma","termid":"MONDO:0005004"},{"relation_name":"is_a","term_name":"hepatocellular carcinoma","termid":"MONDO:0007256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0002515"],"is_obsolete":false,"name":"hepatocellular clear cell carcinoma","secondary_identifiers":["DOID:5016","UMLS:C1266020","ICDO:8174/3","NCIT:C5754","MEDGEN:690059"],"synonyms":[{"name":"clear cell carcinoma of liver cells","type":"exact"},{"name":"clear cell carcinoma of the liver cells","type":"exact"},{"name":"clear cell hepatocellular cancer","type":"exact"},{"name":"clear cell hepatocellular carcinoma","type":"exact"},{"name":"hepatocellular clear cell carcinoma","type":"exact"},{"name":"liver cell clear cell carcinoma","type":"exact"}],"termid":"MONDO:0003243","xrefs":{"Monarch":{"xref_id":"0003243"}}}


id: MONDO:0007292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete celiac artery stenosis from compression by median arcuate ligament of diaphragm (obsolete MONDO:0007292)","termid":"MONDO:0007292","xrefs":{"Monarch":{"xref_id":"0007292"}}}


id: GO:0004611
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphate + oxaloacetate = phosphoenolpyruvate + CO2 + other reaction products.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"phosphoenolpyruvate carboxykinase activity","synonyms":[{"name":"PEP carboxykinase activity","type":"related"},{"name":"PEPCK activity","type":"related"},{"name":"phosphopyruvate carboxylase activity","type":"related"}],"termid":"GO:0004611"}


id: SO:1000038
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A duplication that occurred within a chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"duplication","termid":"SO:1000035"},{"relation_name":"is_a","term_name":"intrachromosomal_mutation","termid":"SO:1000028"},{"relation_name":"is_a","term_name":"chromosomal_duplication","termid":"SO:1000037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intrachromosomal_duplication","synonyms":[{"name":"intrachromosomal duplication","type":"exact"}],"termid":"SO:1000038"}


id: PBO:0077399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 132E","termid":"PBO:0077399"}


id: FYPO:0000520
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of oxidative phosphorylation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular respiration","termid":"FYPO:0000565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased oxidative phosphorylation","synonyms":[{"name":"increased oxidative phosphorylation during mitotic cell cycle","type":"related"},{"name":"increased oxidative phosphorylation during vegetative growth","type":"exact"},{"name":"oxidative phosphorylation: increased","type":"related"}],"termid":"FYPO:0000520"}


id: PBO:0002695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp16 (predicted)","termid":"PBO:0002695"}


id: FYPO:0005334
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the Holliday junctions is greater than normal. A Holliday junction is a structure where two DNA double strands are held together by reciprocal exchange of two of the four strands, one strand each from the two original helices.","definition_xrefs":["GO:0000400","PMID:15367656","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased number of Holliday junctions","synonyms":[{"name":"increased amount of X-shaped DNA","type":"related"},{"name":"increased number of Holliday junctions during mitotic cell cycle","type":"related"},{"name":"increased number of Holliday junctions during vegetative growth","type":"exact"},{"name":"increased number of four-way junctions","type":"exact"}],"termid":"FYPO:0005334"}


id: GO:0042935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of achromobactin, a citrate siderophore, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","PMID:10928541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"siderophore transport","termid":"GO:0015891"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"achromobactin transport","termid":"GO:0042935"}


id: MONDO:0014336
data:
  {"annotated_genes":["SJAG_04396"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88456],"is_not":false,"summary":null,"term":"MONDO:0014336"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04396":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability-facial dysmorphism syndrome due to SETD5 haploinsufficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615761","MEDGEN:816736","DOID:0070053","Orphanet:404440","GARD:17673","UMLS:C3810406"],"synonyms":[{"name":"MRD23","type":"exact"},{"name":"autosomal dominant intellectual disability 23","type":"exact"},{"name":"autosomal dominant mental retardation 23","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 23","type":"related"},{"name":"intellectual developmental disorder, autosomal dominant 23","type":"exact"},{"name":"intellectual disability, autosomal dominant 23","type":"related"},{"name":"intellectual disability, autosomal dominant type 23","type":"exact"},{"name":"intellectual disability-facial dysmorphism syndrome due to SETD5 haploinsufficiency","type":"exact"},{"name":"mental retardation, autosomal dominant 23","type":"related"},{"name":"mental retardation, autosomal dominant type 23","type":"exact"}],"termid":"MONDO:0014336","terms_by_termid":{"MONDO:0014336":null},"xrefs":{"Monarch":{"xref_id":"0014336"}}}


id: PBO:0061496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuritin 1","termid":"PBO:0061496"}


id: PBO:0059720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 28","termid":"PBO:0059720"}


id: PBO:0047466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc receptor like 6","termid":"PBO:0047466"}


id: PBO:0072001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 3","termid":"PBO:0072001"}


id: PBO:0072176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S16 pseudogene 3","termid":"PBO:0072176"}


id: PBO:0026770
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_uracil_import","termid":"PBO:0026770"}


id: GO:1990627
data:
  {"annotated_genes":["SJAG_02656"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106855],"is_not":false,"summary":null,"term":"GO:1990627"}]},"cv_name":"biological_process","definition":"The membrane organization process that joins two mitochondrial inner membranes to form a single membrane.","definition_xrefs":["PMID:17055438","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane organization","termid":"GO:0007007"},{"relation_name":"part_of","term_name":"mitochondrial fusion","termid":"GO:0008053"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02656":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0061024","GO:0007005","GO:0008150"],"is_obsolete":false,"name":"mitochondrial inner membrane fusion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrion inner membrane fusion","type":"exact"}],"termid":"GO:1990627","terms_by_termid":{"GO:1990627":null}}


id: MONDO:0008458
data:
  {"annotated_genes":["SJAG_01317"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89124],"is_not":false,"summary":null,"term":"MONDO:0008458"}]},"cv_name":"mondo","definition":"A subtype of type I autosomal dominant cerebellar ataxia (ADCA type I) characterized by truncal ataxia, dysarthria, slowed saccades and less commonly ophthalmoparesis and chorea.","definition_xrefs":["Orphanet:98756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"},{"relation_name":"is_a","term_name":"Huntington disease-like syndrome","termid":"MONDO:0015548"},{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01317":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C148315","SCTID:715751004","OMIM:183090","icd11.foundation:1232187870","NANDO:1200046","DOID:0060204","MEDGEN:155704","GARD:4072","DOID:0050955","UMLS:C0752121"],"synonyms":[{"name":"ALS13","type":"related"},{"name":"ATXN2 autosomal dominant cerebellar ataxia type I","type":"exact"},{"name":"OPCA2","type":"exact"},{"name":"SCA 2","type":"related"},{"name":"SCA2","type":"exact"},{"name":"Wadia swami syndrome","type":"related"},{"name":"Wadia-swami syndrome","type":"related"},{"name":"amyotrophic lateral sclerosis 13","type":"related"},{"name":"amyotrophic lateral sclerosis type 13","type":"related"},{"name":"amyotrophic lateral sclerosis, susceptibility to, 13","type":"related"},{"name":"autosomal dominant cerebellar ataxia type I caused by mutation in ATXN2","type":"exact"},{"name":"cerebellar Degeneration with slow eye movements","type":"related"},{"name":"olivopontocerebellar atrophy 2","type":"related"},{"name":"olivopontocerebellar atrophy Holguin type","type":"related"},{"name":"olivopontocerebellar atrophy, Holguin type","type":"related"},{"name":"spinocerebellar Degeneration with slow eye movements","type":"related"},{"name":"spinocerebellar ataxia 2","type":"related"},{"name":"spinocerebellar ataxia Cuban type","type":"related"},{"name":"spinocerebellar ataxia type 2","type":"exact"},{"name":"spinocerebellar ataxia with slow eye movements","type":"related"},{"name":"spinocerebellar ataxia, Cuban type","type":"related"},{"name":"spinocerebellar atrophy 2","type":"related"}],"termid":"MONDO:0008458","terms_by_termid":{"MONDO:0008458":null},"xrefs":{"Monarch":{"xref_id":"0008458"}}}


id: MONDO:0004466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronitis","secondary_identifiers":["UMLS:C0027881","MEDGEN:45064","DOID:8117","NCIT:C34847"],"synonyms":[{"name":"neuroinflammation","type":"related"}],"termid":"MONDO:0004466","xrefs":{"Monarch":{"xref_id":"0004466"}}}


id: MONDO:0030436
data:
  {"annotated_genes":["SJAG_00066"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88051],"is_not":false,"summary":null,"term":"MONDO:0030436"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited sideroblastic anemia","termid":"MONDO:0020099"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00066":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"anemia, sideroblastic, 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619523","UMLS:C5561985","MEDGEN:1794195"],"synonyms":[{"name":"SIDBA5","type":"exact"}],"termid":"MONDO:0030436","terms_by_termid":{"MONDO:0030436":null},"xrefs":{"Monarch":{"xref_id":"0030436"}}}


id: PBO:0057705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1292","termid":"PBO:0057705"}


id: GO:0002477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class Ib protein complex. The peptide is typically a fragment of a larger exogenous protein which has been degraded within the cell. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family.","definition_xrefs":["PMID:15928678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen via MHC class Ib","termid":"GO:0002428"},{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous peptide antigen","termid":"GO:0002478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous peptide antigen via MHC class Ib","synonyms":[{"name":"exogenous peptide antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0002477"}


id: GO:0042213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of m-cresol (3-hydroxytoluene), the meta-isoform of cresol.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"m-cresol metabolic process","termid":"GO:0018925"},{"relation_name":"is_a","term_name":"cresol catabolic process","termid":"GO:0046199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"m-cresol catabolic process","secondary_identifiers":["MetaCyc:M-CRESOL-DEGRADATION-PWY","UM-BBD_pathwayID:mcr"],"synonyms":[{"name":"3-hydroxytoluene catabolic process","type":"exact"},{"name":"3-hydroxytoluene catabolism","type":"exact"},{"name":"m-cresol breakdown","type":"exact"},{"name":"m-cresol catabolism","type":"exact"},{"name":"m-cresol degradation","type":"exact"},{"name":"meta-cresol catabolic process","type":"exact"},{"name":"meta-cresol catabolism","type":"exact"}],"termid":"GO:0042213"}


id: PBO:0049744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit gamma 2","termid":"PBO:0049744"}


id: PBO:0077367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 106C","termid":"PBO:0077367"}


id: GO:0000918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of marking the site where a division septum will form.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinetic process","termid":"GO:0032506"},{"relation_name":"part_of","term_name":"division septum assembly","termid":"GO:0000917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"division septum site selection","synonyms":[{"name":"selection of site for barrier cell septum biosynthesis","type":"exact"},{"name":"selection of site for barrier cell septum formation","type":"exact"},{"name":"selection of site for division septum formation","type":"exact"},{"name":"septin assembly and septum biosynthesis","type":"broad"},{"name":"septin assembly and septum formation","type":"broad"},{"name":"septum positioning","type":"exact"}],"termid":"GO:0000918"}


id: PBO:0029861
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_tyrosine_phosphorylation_during_cellular_response_to_osmotic_stress","termid":"PBO:0029861"}


id: GO:0010711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of collagen catabolism. Collagen catabolism is the proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"regulation of collagen catabolic process","termid":"GO:0010710"},{"relation_name":"is_a","term_name":"negative regulation of collagen metabolic process","termid":"GO:0010713"},{"relation_name":"negatively_regulates","term_name":"collagen catabolic process","termid":"GO:0030574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of collagen catabolic process","synonyms":[{"name":"down regulation of collagen catabolic process","type":"exact"},{"name":"down-regulation of collagen catabolic process","type":"exact"},{"name":"downregulation of collagen catabolic process","type":"exact"},{"name":"inhibition of collagen catabolic process","type":"narrow"},{"name":"negative regulation of collagen breakdown","type":"exact"},{"name":"negative regulation of collagen catabolism","type":"exact"},{"name":"negative regulation of collagen degradation","type":"exact"}],"termid":"GO:0010711"}


id: GO:0003109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of norepinephrine into the bloodstream modulates the force of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of the force of heart contraction by norepinephrine","termid":"GO:0003061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by circulating norepinephrine","synonyms":[{"name":"increased force of heart contraction by circulating noradrenaline","type":"related"},{"name":"increased force of heart contraction by circulating norepinephrine","type":"exact"}],"termid":"GO:0003109"}


id: GO:0034394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the external part of the cell wall and/or plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to cell surface","synonyms":[{"name":"protein localisation at cell surface","type":"exact"},{"name":"protein localization at cell surface","type":"exact"}],"termid":"GO:0034394"}


id: GO:1905473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K79 dimethylation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:27541139"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K79 dimethylation (obsolete GO:1905473)","synonyms":[{"name":"activation of histone H3 K79 dimethylation","type":"narrow"},{"name":"activation of histone H3-K79 dimethylation","type":"narrow"},{"name":"activation of histone lysine H3 K79 dimethylation","type":"narrow"},{"name":"positive regulation of histone H3 K79 dimethylation","type":"exact"},{"name":"positive regulation of histone lysine H3 K79 dimethylation","type":"exact"},{"name":"up regulation of histone H3 K79 dimethylation","type":"exact"},{"name":"up regulation of histone H3-K79 dimethylation","type":"exact"},{"name":"up regulation of histone lysine H3 K79 dimethylation","type":"exact"},{"name":"up-regulation of histone H3 K79 dimethylation","type":"exact"},{"name":"up-regulation of histone H3-K79 dimethylation","type":"exact"},{"name":"up-regulation of histone lysine H3 K79 dimethylation","type":"exact"},{"name":"upregulation of histone H3 K79 dimethylation","type":"exact"},{"name":"upregulation of histone H3-K79 dimethylation","type":"exact"},{"name":"upregulation of histone lysine H3 K79 dimethylation","type":"exact"}],"termid":"GO:1905473"}


id: PBO:0028876
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_M26_site","termid":"PBO:0028876"}


id: PBO:0076014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 4","termid":"PBO:0076014"}


id: MONDO:0019562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Localized scleroderma is the skin localized form of scleroderma characterized by fibrosis of the skin causing cutaneous plaques or strips.","definition_xrefs":["Orphanet:90289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scleroderma","termid":"MONDO:0019340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"localized scleroderma","secondary_identifiers":["SCTID:201048007","UMLS:C0036420","DOID:8472","GARD:7058","icd11.foundation:1430740369","MEDGEN:48586","MESH:D012594","ICD9:701.0","EFO:1001361","MedDRA:10039712","NCIT:C72069"],"synonyms":[{"name":"Scleroderma, circumscribed or localised","type":"exact"},{"name":"Scleroderma, circumscribed or localized","type":"exact"},{"name":"Scleroderma, localised","type":"related"},{"name":"Scleroderma, localized","type":"related"},{"name":"circumscribed scleroderma","type":"exact"},{"name":"localised fibrosing scleroderma","type":"exact"},{"name":"localised morphea","type":"exact"},{"name":"localised morphoea","type":"exact"},{"name":"localised scleroderma (disorder) [ambiguous]","type":"exact"},{"name":"localized fibrosing scleroderma","type":"exact"},{"name":"localized morphea","type":"exact"},{"name":"localized morphoea","type":"exact"},{"name":"localized scleroderma","type":"exact"},{"name":"localized scleroderma (disorder) [ambiguous]","type":"exact"},{"name":"morphea","type":"exact"}],"termid":"MONDO:0019562","xrefs":{"Monarch":{"xref_id":"0019562"}}}


id: GO:0110057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood vessel endothelial cell differentiation.","definition_xrefs":["GOC:BHF","PMID:23072816","GOC:rph","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell differentiation","termid":"GO:0045601"},{"relation_name":"regulates","term_name":"blood vessel endothelial cell differentiation","termid":"GO:0060837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood vessel endothelial cell differentiation","termid":"GO:0110057"}


id: GO:0023055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is initiated by a peptide hormone.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by peptide hormone (obsolete GO:0023055)","synonyms":[{"name":"signal initiation by peptide hormone","type":"exact"}],"termid":"GO:0023055"}


id: MONDO:0016865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Kleefstra syndrome","termid":"MONDO:0012455"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kleefstra syndrome due to a point mutation","secondary_identifiers":["UMLS:C5680724","MEDGEN:1826146","Orphanet:261652","GARD:17253"],"termid":"MONDO:0016865","xrefs":{"Monarch":{"xref_id":"0016865"}}}


id: SO:0000157
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A plasmid which carries within its sequence a bacteriophage replication origin. When the host bacterium is infected with \\\"helper\\\" phage, a phagemid is replicated along with the phage DNA and packaged into phage capsids.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phagemid","secondary_identifiers":["http://en.wikipedia.org/wiki/Phagemid"],"synonyms":[{"name":"phagemid vector","type":"related"}],"termid":"SO:0000157"}


id: PBO:0082512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the ER membrane GPI transamidase complex; involved in adding glycosylphosphatidylinositol (GPI) anchors to newly synthesized proteins; luminally-oriented type I integral membrane glycoprotein of the ER; human PIGK protein is a functional homolog","termid":"PBO:0082512"}


id: GO:0055028
data:
  {"annotated_genes":["SJAG_01297","SJAG_02045","SJAG_00113","SJAG_01613","SJAG_01224","SJAG_00851","SJAG_02336","SJAG_03073","SJAG_00140"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93253,100524,101121,103353,105812,110206],"is_not":false,"summary":null,"term":"GO:0055028"},{"annotations":[97103,99484,105674],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903754"}]},"cv_name":"cellular_component","definition":"Arrays of microtubules underlying and connected to the plasma membrane in the cortical cytosol.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic microtubule","termid":"GO:0005881"},{"relation_name":"part_of","term_name":"cortical microtubule cytoskeleton","termid":"GO:0030981"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00851":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01613":null,"SJAG_02045":null,"SJAG_02336":null,"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0015630","GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"cortical microtubule","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0055028","terms_by_termid":{"GO:0055028":null,"GO:1903754":null}}


id: PBO:0030935
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_nuclear_RNA_level_during_vegetative_growth","termid":"PBO:0030935"}


id: PBO:0004968
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.1.3.2","termid":"PBO:0004968"}


id: MONDO:0957561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"encephalopathy, acute, infection-induced","termid":"MONDO:0000166"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"encephalitis, acute, infection-induced, susceptibility to","termid":"MONDO:0800174"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalitis, acute, infection-induced, susceptibility to, 12","secondary_identifiers":["UMLS:C5882673","OMIM:620461","MEDGEN:1846830"],"termid":"MONDO:0957561","xrefs":{"Monarch":{"xref_id":"0957561"}}}


id: MONDO:0017266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited ichthyosis","termid":"MONDO:0015947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"keratinopathic ichthyosis","secondary_identifiers":["GARD:21107","Orphanet:281103","NANDO:2200987","NANDO:1200610","UMLS:C4511307","icd11.foundation:992865924","SCTID:724837004","MEDGEN:1393111"],"synonyms":[{"name":"KPI","type":"exact"}],"termid":"MONDO:0017266","xrefs":{"Monarch":{"xref_id":"0017266"}}}


id: PBO:0067030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 43, pseudogene","termid":"PBO:0067030"}


id: FYPO:0002899
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to a DNA damage stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to DNA damage","synonyms":[{"name":"normal protein phosphorylation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to DNA damage during vegetative growth","type":"exact"}],"termid":"FYPO:0002899"}


id: PBO:0015703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane transmembrane transport regulator (predicted)","termid":"PBO:0015703"}


id: PBO:0012854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 Arrest Defective","termid":"PBO:0012854"}


id: PATO:0001360
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having thin filamentous extensions at its edge.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"filamentous","termid":"PATO:0001360"}


id: MONDO:0013361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital factor II deficiency is an inherited bleeding disorder due to reduced activity of factor II (FII, prothrombin) and characterized by mucocutaneous bleeding symptoms.","definition_xrefs":["Orphanet:325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"congenital vitamin K-dependent coagulation factors deficiency","termid":"MONDO:0015722"},{"relation_name":"is_a","term_name":"prothrombin deficiency","termid":"MONDO:0024307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0006025"],"is_obsolete":false,"name":"congenital prothrombin deficiency","secondary_identifiers":["NANDO:2200673","ICD9:286.3","MEDGEN:124425","MESH:D007020","DOID:2235","NCIT:C131737","OMIM:613679","UMLS:C0272317","GARD:2926","SCTID:73975000"],"synonyms":[{"name":"Dysprothrombinemia","type":"exact"},{"name":"congenital factor II deficiency","type":"related"},{"name":"congenital prothrombin deficiency","type":"exact"},{"name":"factor 2 deficiency","type":"broad"},{"name":"factor II deficiency","type":"broad"},{"name":"hereditary prothrombin deficiency","type":"exact"},{"name":"hypoprothrombinemia","type":"broad"},{"name":"prothrombin deficiency","type":"broad"},{"name":"prothrombin deficiency, congenital","type":"related"}],"termid":"MONDO:0013361","xrefs":{"Monarch":{"xref_id":"0013361"}}}


id: GO:0030082
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein-pigment complex that absorbs light at 800 and 850 nm; is peripherally associated to the bacterial reaction center; transfers excitation energy to the B875 antenna complex.","definition_xrefs":["GOC:kd","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"light-harvesting complex, peripheral complex","termid":"GO:0030079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"B800-850 antenna complex","synonyms":[{"name":"LH2 complex","type":"exact"},{"name":"light harvesting complex II","type":"exact"}],"termid":"GO:0030082"}


id: PBO:0016964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron-sulfur cluster biogenesis protein Iba57 (predicted)","termid":"PBO:0016964"}


id: MONDO:0023048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia neurosensory deafness","secondary_identifiers":["GARD:2053"],"termid":"MONDO:0023048","xrefs":{"Monarch":{"xref_id":"0023048"}}}


id: MONDO:1010871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any mucopolysaccharidosis that occurs in dogs due to a mutation in the GUSB gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis or mucopolysaccharidosis-like disorder, non-human animal","termid":"MONDO:1012581"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucopolysaccharidosis, GUSB-related, dog","secondary_identifiers":["OMIA:000667-9615"],"synonyms":[{"name":"mucopolysaccharidosis VII, dog","type":"related"}],"termid":"MONDO:1010871","xrefs":{"Monarch":{"xref_id":"1010871"}}}


id: MOD:00685
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to L-glutamic acid.","definition_xrefs":["Unimod:7#Q","RESID:AA0006#GLN","PubMed:9192900","PubMed:4922541","PubMed:6692818","PubMed:957425","PubMed:1881881","PubMed:4565668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamic acid residue","termid":"MOD:00015"},{"relation_name":"is_a","term_name":"deamidated residue","termid":"MOD:00400"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deamidated L-glutamine","synonyms":[{"name":"(2S)-2-aminopentanedioic acid","type":"exact"},{"name":"1-aminopropane-1,3-dicarboxylic acid","type":"exact"},{"name":"2-aminoglutaric acid","type":"exact"},{"name":"2-azanylpentanedioic acid","type":"exact"},{"name":"L-glutamic acid","type":"exact"},{"name":"MOD_RES Deamidated glutamine","type":"exact"},{"name":"alpha-aminoglutaric acid","type":"exact"},{"name":"dNGln","type":"exact"},{"name":"glutaminic acid","type":"exact"}],"termid":"MOD:00685"}


id: PBO:0017744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine-rich repeat protein, unknown role","termid":"PBO:0017744"}


id: GO:0042447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hormone catabolic process","synonyms":[{"name":"hormone breakdown","type":"exact"},{"name":"hormone catabolism","type":"exact"},{"name":"hormone degradation","type":"exact"}],"termid":"GO:0042447"}


id: GO:0032613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-10 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-10 production","secondary_identifiers":["GO:0072608","GO:0042091"],"synonyms":[{"name":"IL-10 production","type":"exact"},{"name":"interleukin-10 biosynthetic process","type":"narrow"},{"name":"interleukin-10 secretion","type":"narrow"}],"termid":"GO:0032613"}


id: GO:0061305
data:
  {"annotated_genes":["SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105633],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0061361"}]},"cv_name":"biological_process","definition":"The maintenance of established bipolar anisotropic intracellular organization or cell growth patterns that results in the shaping of a cell.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061246"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"maintenance of bipolar cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061305","terms_by_termid":{"GO:0061361":null}}


id: MONDO:0021642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A varicose disease that involves the mammalian vulva.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"pelvic varices","termid":"MONDO:0004869"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulval varices","secondary_identifiers":["ICD9:456.6","HP:0100677","SCTID:48868008","icd11.foundation:53329171","MEDGEN:510083","UMLS:C0155796","ICD10CM:I86.3"],"synonyms":[{"name":"mammalian vulva varicose disease","type":"exact"},{"name":"varicose disease of mammalian vulva","type":"exact"}],"termid":"MONDO:0021642","xrefs":{"Monarch":{"xref_id":"0021642"}}}


id: MONDO:0000770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Allergic reaction to shellfish or shellfish products.","definition_xrefs":["MESH:D000067208"],"gene_count":0,"genotype_count":0,"name":"obsolete shellfish allergy (obsolete MONDO:0000770)","secondary_identifiers":["DOID:0060495","SCTID:300913006","NCIT:C172320"],"termid":"MONDO:0000770","xrefs":{"Monarch":{"xref_id":"0000770"}}}


id: PBO:0031246
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_gene_conversion","termid":"PBO:0031246"}


id: PBO:0070291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 32","termid":"PBO:0070291"}


id: PBO:0028008
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_during_meiotic_cell_cycle","termid":"PBO:0028008"}


id: PBO:0038683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase short chain family member 2","termid":"PBO:0038683"}


id: _global:capable_of_negatively_regulating
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"Holds between c and p if and only if c is capable of some activity a, and a negatively regulates p.","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_regulating","termid":"_global:capable_of_regulating"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of_negatively_regulating","secondary_identifiers":["RO:0002597"],"termid":"_global:capable_of_negatively_regulating"}


id: GO:0070862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of proteins from the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein exit from endoplasmic reticulum","termid":"GO:0070861"},{"relation_name":"is_a","term_name":"negative regulation of intracellular protein transport","termid":"GO:0090317"},{"relation_name":"negatively_regulates","term_name":"protein exit from endoplasmic reticulum","termid":"GO:0032527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein exit from endoplasmic reticulum","synonyms":[{"name":"down regulation of protein exit from endoplasmic reticulum","type":"exact"},{"name":"down-regulation of protein exit from endoplasmic reticulum","type":"exact"},{"name":"downregulation of protein exit from endoplasmic reticulum","type":"exact"},{"name":"inhibition of protein exit from endoplasmic reticulum","type":"narrow"},{"name":"negative regulation of protein exit from ER","type":"exact"},{"name":"negative regulation of protein export from ER","type":"exact"},{"name":"negative regulation of protein export from endoplasmic reticulum","type":"exact"}],"termid":"GO:0070862"}


id: GO:0005592
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen heterotrimer containing type XI and type II alpha chains in alpha1(XI) alpha2(XI) alpha1(II) trimers; type XI collagen triple helices associate to form fibrils.","definition_xrefs":["PMID:7642541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibrillar collagen trimer","termid":"GO:0005583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type XI trimer","termid":"GO:0005592"}


id: MONDO:0003819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mature or immature teratoma that arises from the ovary and occurs in children.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pediatric ovarian germ cell tumor","termid":"MONDO:0003760"},{"relation_name":"is_a","term_name":"ovarian teratoma","termid":"MONDO:0005602"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood teratoma of the ovary","secondary_identifiers":["DOID:6230","UMLS:C1332992","NCIT:C6554","MEDGEN:272466"],"synonyms":[{"name":"childhood ovarian teratoma","type":"exact"},{"name":"childhood teratoma of ovary","type":"exact"},{"name":"childhood teratoma of the ovary","type":"exact"},{"name":"ovarian teratoma of childhood","type":"exact"},{"name":"paediatric ovarian teratoma","type":"exact"},{"name":"paediatric teratoma of ovary","type":"exact"},{"name":"paediatric teratoma of the ovary","type":"exact"},{"name":"pediatric ovarian teratoma","type":"exact"},{"name":"pediatric teratoma of ovary","type":"exact"},{"name":"pediatric teratoma of the ovary","type":"exact"}],"termid":"MONDO:0003819","xrefs":{"Monarch":{"xref_id":"0003819"}}}


id: GO:0032505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The biological process in which new individuals are produced by one or two single-celled organisms. The new individuals inherit some proportion of their genetic material from the parent or parents.","definition_xrefs":["GOC:isa_complete"],"gene_count":0,"genotype_count":0,"name":"obsolete reproduction of a single-celled organism (obsolete GO:0032505)","termid":"GO:0032505"}


id: PBO:0087146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding subunit of the TRAMP nuclear RNA surveillance complex; involved in nuclear RNA processing and degradation; involved in TRAMP complex assembly as a bridge between Mtr4p and Trf4p; stimulates the poly(A) polymerase activity of Pap2p in vitro; has 5 zinc knuckle motifs; AIR2 has a paralog, AIR1, that arose from the whole genome duplication; Air2p and Air1p have nonredundant roles in regulation of substrate specificity of the exosome","termid":"PBO:0087146"}


id: GO:0009863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by salicylic acid.","definition_xrefs":["GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"cellular response to salicylic acid stimulus","termid":"GO:0071446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"salicylic acid mediated signaling pathway","synonyms":[{"name":"salicylic acid mediated signal transduction","type":"exact"},{"name":"salicylic acid mediated signalling pathway","type":"exact"},{"name":"salicylic acid-mediated signaling pathway","type":"exact"}],"termid":"GO:0009863"}


id: MONDO:0032890
data:
  {"annotated_genes":["SJAG_01315"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88657],"is_not":false,"summary":null,"term":"MONDO:0032890"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01315":null},"genotype_count":0,"is_obsolete":false,"name":"neuromuscular disease and ocular or auditory anomalies with or without seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618733","UMLS:C5231483","MEDGEN:1684689"],"synonyms":[{"name":"NEUROMUSCULAR DISEASE AND OCULAR OR AUDITORY ANOMALIES WITH OR WITHOUT SEIZURES","type":"related"},{"name":"NMOAS","type":"related"}],"termid":"MONDO:0032890","terms_by_termid":{"MONDO:0032890":null},"xrefs":{"Monarch":{"xref_id":"0032890"}}}


id: PBO:0073641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 28, pseudogene","termid":"PBO:0073641"}


id: MONDO:0019593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46,XX disorder of sex development induced by fetal androgens excess (obsolete MONDO:0019593)","secondary_identifiers":["Orphanet:90776"],"synonyms":[{"name":"46,XX DSD induced by fetal androgens excess","type":"exact"},{"name":"46,XX DSD induced by foetal androgens excess","type":"exact"}],"termid":"MONDO:0019593","xrefs":{"Monarch":{"xref_id":"0019593"}}}


id: GO:0021579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the medulla oblongata is generated and organized. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"medulla oblongata development","termid":"GO:0021550"},{"relation_name":"part_of","term_name":"hindbrain morphogenesis","termid":"GO:0021575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medulla oblongata morphogenesis","synonyms":[{"name":"medulla morphogenesis","type":"related"},{"name":"myelencephalon morphogenesis","type":"related"}],"termid":"GO:0021579"}


id: PBO:0073803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 9","termid":"PBO:0073803"}


id: MONDO:0019490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary cardiac conduction disorder that may progress to complete atrioventricular (AV) block. The disease is either asymptomatic or manifests as dyspnea, dizziness, syncope, abdominal pain, heart failure or sudden death.","definition_xrefs":["Orphanet:871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart conduction disease","termid":"MONDO:0000992"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"progressive familial heart block","secondary_identifiers":["SCTID:698249005","GARD:10005","ICD9:426.6","DOID:0111073","SCTID:93130009","OMIMPS:113900"],"synonyms":[{"name":"PFHB","type":"exact"},{"name":"familial Lenegre disease","type":"exact"},{"name":"familial Lenègre disease","type":"exact"},{"name":"familial Lev disease","type":"exact"},{"name":"familial Lev-Lenegre disease","type":"exact"},{"name":"familial Lev-Lenègre disease","type":"exact"},{"name":"familial PCCD","type":"exact"},{"name":"familial progressive cardiac conduction defect","type":"related"},{"name":"familial progressive heart block","type":"exact"},{"name":"hereditary bundle branch defect","type":"narrow"}],"termid":"MONDO:0019490","xrefs":{"Monarch":{"xref_id":"0019490"}}}


id: GO:0019429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fluorene, a tricyclic polycyclic aromatic hydrocarbon containing a five-membered ring. It is a major component of fossil fuels and their derivatives and is also a by-product of coal-conversion and energy-related industries. It is commonly found in vehicle exhaust emissions, crude oils, motor oils, coal and oil combustion products, waste incineration, and industrial effluents.","definition_xrefs":["PMID:15317800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fluorene catabolic process","secondary_identifiers":["UM-BBD_pathwayID:flu","GO:0018917","MetaCyc:FLUORENE-DEG-9-ONE-PWY"],"synonyms":[{"name":"fluorene breakdown","type":"exact"},{"name":"fluorene catabolism","type":"exact"},{"name":"fluorene degradation","type":"exact"},{"name":"fluorene metabolic process","type":"narrow"},{"name":"fluorene metabolism","type":"exact"}],"termid":"GO:0019429"}


id: PBO:0074906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 77B","termid":"PBO:0074906"}


id: FYPO:0007732
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin at the 3' ends of genes that can be transcribed by RNA polymerase III is normal (i.e. indistinguishable from wild type) during metaphase of the mitotic cell cycle.","definition_xrefs":["PMID:33771877","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at 3' end of genes","termid":"FYPO:0007731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes during mitotic metaphase","synonyms":[{"name":"normal condensin localization to chromatin at 3' end of RNA polymerase III-transcribed genes during mitotic metaphase","type":"narrow"},{"name":"normal protein localisation to chromatin at 3' end of RNA polymerase III-transcribed genes during mitotic metaphase","type":"exact"},{"name":"normal protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes during metaphase during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes during metaphase of mitotic cell cycle","type":"exact"},{"name":"normal protein localization to chromatin downstream of RNA polymerase III-transcribed genes during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007732"}


id: PR:Q7Z9I1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfl4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7Z9I1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell agglutination protein C188.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.09c","synonyms":[{"name":"Spom972h-pfl4","type":"exact"}],"termid":"PR:Q7Z9I1"}


id: PBO:0079367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 1","termid":"PBO:0079367"}


id: MONDO:0003745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spindle cell melanoma that involves the optic choroid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle cell intraocular melanoma","termid":"MONDO:0003744"},{"relation_name":"is_a","term_name":"malignant choroid melanoma","termid":"MONDO:0003878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"choroid spindle cell melanoma","secondary_identifiers":["DOID:6041","UMLS:C1333027","NCIT:C6099","MEDGEN:272477"],"synonyms":[{"name":"optic choroid spindle cell melanoma","type":"exact"},{"name":"spindle cell melanoma of choroid","type":"exact"},{"name":"spindle cell melanoma of optic choroid","type":"exact"},{"name":"spindle cell melanoma of the choroid","type":"exact"}],"termid":"MONDO:0003745","xrefs":{"Monarch":{"xref_id":"0003745"}}}


id: PBO:0087951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation initiation factor eIF5; functions as both a GTPase-activating protein (GAP) that stimulates the hydrolysis of GTP bound to eIF-2, as part of the 43S preinitiation complex, and as a GDP dissociation inhibitor (GDI) to prevent recycling of eIF2; human ortholog eIF5 complements the yeast null mutant","termid":"PBO:0087951"}


id: GO:0034341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon-gamma is also known as type II interferon.","definition_xrefs":["ISBN:0126896631","GOC:add","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"},{"relation_name":"part_of","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to type II interferon","synonyms":[{"name":"response to gamma-interferon","type":"related"},{"name":"response to immune interferon","type":"exact"},{"name":"response to interferon-gamma","type":"broad"},{"name":"response to type II IFN","type":"broad"}],"termid":"GO:0034341"}


id: MONDO:0011056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary Wilms tumor","termid":"MONDO:0003321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"Wilms tumor 4","secondary_identifiers":["OMIM:601363","UMLS:C1832426","MESH:C563336","GARD:15328","MEDGEN:318623"],"synonyms":[{"name":"WT4","type":"related"},{"name":"Wilms tumor 4","type":"exact"},{"name":"Wilms tumor type 4","type":"exact"},{"name":"Wilms tumor, type 4","type":"exact"},{"name":"Wilms tumour type 4","type":"exact"},{"name":"familial Wilms tumor 1","type":"related"},{"name":"familial Wilms tumour 1","type":"related"}],"termid":"MONDO:0011056","xrefs":{"Monarch":{"xref_id":"0011056"}}}


id: MONDO:0004114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A highly aggressive carcinoma, histologically resembling small cell lung carcinoma. In most cases it is associated with carcinoma in situ.","definition_xrefs":["NCIT:C9461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"urinary bladder carcinoma","termid":"MONDO:0004986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"urinary bladder small cell neuroendocrine carcinoma","secondary_identifiers":["GARD:11923","EFO:1000129","DOID:7132","MEDGEN:231950","ONCOTREE:SCBC","Orphanet:284400","UMLS:C1332564"],"synonyms":[{"name":"SCCB","type":"exact"},{"name":"bladder small cell neuroendocrine cancer","type":"exact"},{"name":"bladder small cell neuroendocrine carcinoma","type":"exact"},{"name":"poorly differentiated neuroendocrine carcinoma of the bladder","type":"exact"},{"name":"small cell bladder cancer","type":"exact"},{"name":"small cell bladder carcinoma","type":"exact"},{"name":"small cell carcinoma of the bladder","type":"related"},{"name":"small cell carcinoma of the urinary bladder","type":"exact"},{"name":"small cell carcinoma of urinary bladder","type":"exact"},{"name":"small cell neuroendocrine carcinoma of the urinary bladder","type":"exact"},{"name":"small cell neuroendocrine carcinoma of urinary bladder","type":"exact"},{"name":"small cell/neuroendocrine carcinoma of urinary bladder","type":"exact"},{"name":"urinary bladder small cell carcinoma","type":"exact"}],"termid":"MONDO:0004114","xrefs":{"Monarch":{"xref_id":"0004114"}}}


id: GO:0120022
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the glucagon family peptide hormone (e.g. glucagon, glucagon-like peptides, oxyntomodulin, glicentin, ADCYAP1, GHRH, secretin, VIP, GIP).","definition_xrefs":["PMID:17715056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"glucagon family peptide binding","secondary_identifiers":["GO:0120024"],"synonyms":[{"name":"glucagon binding","type":"narrow"},{"name":"glucagon-like peptide binding","type":"narrow"}],"termid":"GO:0120022"}


id: PBO:0004122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Mis3","termid":"PBO:0004122"}


id: GO:0016462
data:
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