# terms

id: MONDO:0009489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary palmoplantar keratoderma, Gamborg-Nielsen type is characterized by the presence of diffuse palmoplantar keratoderma without associated symptoms. The syndrome has been described in multiple families from the northernmost county of Sweden (Norrbotten). The palmoplantar keratoderma found in the Gamborg-Nielsen type disease is milder than that found in Mal de Meleda but more severe than that found in Thost-Unna palmoplantar keratoderma. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:86923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary palmoplantar keratoderma, Gamborg-Nielsen type","secondary_identifiers":["MESH:C565454","OMIM:244850","SCTID:717228004","MEDGEN:894571","UMLS:C4273986","GARD:16767"],"synonyms":[{"name":"PPK, Gamborg-Nielsen type","type":"exact"},{"name":"PPKNR","type":"related"},{"name":"hereditary palmoplantar hyperkeratosis, Gamborg-Nielsen type","type":"exact"},{"name":"palmoplantar keratoderma, Norrbotten recessive type","type":"related"}],"termid":"MONDO:0009489","xrefs":{"Monarch":{"xref_id":"0009489"}}}


id: GO:0035693
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex comprising nitric oxide synthase 2 and CD74. This stable complex formation is thought to prevent CD74 degradation by caspases.","definition_xrefs":["PMID:18003616","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"NOS2-CD74 complex","termid":"GO:0035693"}


id: FYECO:0000430
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in minimal medium where the medium contained trace amounts of glucose (<0.1%).","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MM with trace glucose","synonyms":[{"name":"minimal medium with trace glucose","type":"exact"},{"name":"very low glucose MM","type":"exact"}],"termid":"FYECO:0000430"}


id: PBO:0071247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 88","termid":"PBO:0071247"}


id: MONDO:0800109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A interstial lung disease characterized by the presence of persistent or intermittent tachypnea (usually noticed in neonatal period or after an acute infection for the first time in first months of life), crackles in 86 %, retractions in 82%, failure to thrive in 66%, chest wall abnormalities in 22% and hypoxemia or desaturation in 88%.","definition_xrefs":["PMID:26474448","PMID:16957891","PMID:20623780","PMID:32761949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease specific to infancy","termid":"MONDO:0017019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent tachypnoe of infancy","synonyms":[{"name":"PTI","type":"exact"}],"termid":"MONDO:0800109","xrefs":{"Monarch":{"xref_id":"0800109"}}}


id: PR:000041293
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A core histone that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"core histone (Schizosaccharomyces pombe)","synonyms":[{"name":"Spom-coreHistone","type":"exact"}],"termid":"PR:000041293"}


id: FYPO:0001153
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of methylamine measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular methylamine level","synonyms":[{"name":"normal cellular methylamine accumulation","type":"related"},{"name":"normal cellular methylamine level during mitotic cell cycle","type":"related"},{"name":"normal cellular methylamine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001153"}


id: PR:P36579
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.18c","synonyms":[{"name":"Spom972h-arf1","type":"exact"}],"termid":"PR:P36579"}


id: PBO:0056696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific with coiled-coil domain","termid":"PBO:0056696"}


id: SO:0000926
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to insert a CU dinucleotide.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000926 insert_CU (obsolete SO:0000926)","synonyms":[{"name":"insert CU","type":"exact"}],"termid":"SO:0000926"}


id: PBO:0081850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 783","termid":"PBO:0081850"}


id: MONDO:0001508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A eustachian tube disorder with a wider eustachian tube which allows a larger bolus of bacteria-laden material from the nasopharynx during an infection to enter the middle ear, causing a more fulminant infection.","definition_xrefs":["DOID:12358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eustachian tube disorder","termid":"MONDO:0004866"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patulous eustachian tube","secondary_identifiers":["ICD10CM:H69.0","MEDGEN:509965","UMLS:C0155434","icd11.foundation:1112306780","ICD9:381.7","SCTID:30280005"],"termid":"MONDO:0001508","xrefs":{"Monarch":{"xref_id":"0001508"}}}


id: PBO:0066207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22","termid":"PBO:0066207"}


id: PBO:0038565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABL proto-oncogene 1, non-receptor tyrosine kinase","termid":"PBO:0038565"}


id: PBO:0081838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 773","termid":"PBO:0081838"}


id: GO:0005460
data:
  {"annotated_genes":["SJAG_04162"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77765],"is_not":false,"summary":null,"term":"GO:0005460"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a UDP-glucose from one side of a membrane to the other. UDP-glucose is a substance composed of glucose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transporter activity","termid":"GO:0015165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"UDP-glucose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0005460","terms_by_termid":{"GO:0005460":null}}


id: MONDO:0017472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"patella aplasia/hypoplasia","termid":"MONDO:0008205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"patella aplasia/hypoplasia, unilateral","secondary_identifiers":["Orphanet:295038"],"termid":"MONDO:0017472","xrefs":{"Monarch":{"xref_id":"0017472"}}}


id: FYPO:0001911
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the glycosylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal. Protein glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid.","definition_xrefs":["PomBase:mah","GO:0006486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein glycosylation during vegetative growth","termid":"FYPO:0001910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein glycosylation during vegetative growth","synonyms":[{"name":"decreased protein glycosylation during mitotic cell cycle","type":"related"},{"name":"protein hypoglycosylation during vegetative growth","type":"exact"},{"name":"reduced protein glycosylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001911"}


id: PBO:0089062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1/TPR repeat protein1, 3-beta-glucan synthase regulatory factor Chf3/Chr4","termid":"PBO:0089062"}


id: GO:0035439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranylgeranyl diphosphate = halima-5(6),13-dien-15-yl diphosphate.","definition_xrefs":["EC:5.5.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0009975","GO:0003824"],"is_obsolete":false,"name":"halimadienyl-diphosphate synthase activity","secondary_identifiers":["RHEA:25621"],"synonyms":[{"name":"halima-5(6),13-dien-15-yl-diphosphate lyase (cyclizing)","type":"related"},{"name":"halimadienyl diphosphate synthase activity","type":"related"}],"termid":"GO:0035439"}


id: PBO:0044146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitobiase","termid":"PBO:0044146"}


id: GO:0036293
data:
  {"annotated_genes":["SJAG_01585","SJAG_00221","SJAG_00642","SJAG_01150","SJAG_03345","SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111826,103148,113697,118996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071456"},{"annotations":[118395,91132],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900039"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting a decline in the level of oxygen.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen levels","termid":"GO:0070482"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00642":null,"SJAG_01150":null,"SJAG_01585":null,"SJAG_03345":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to decreased oxygen levels","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to lowered oxygen levels","type":"exact"}],"termid":"GO:0036293","terms_by_termid":{"GO:0071456":null,"GO:1900039":null}}


id: MONDO:1011765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"micromelia, non-human animal","secondary_identifiers":["OMIA:000648"],"termid":"MONDO:1011765","xrefs":{"Monarch":{"xref_id":"1011765"}}}


id: FYPO:0006457
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the central core of the centromeric regions is abolished during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"},{"relation_name":"is_a","term_name":"abolished protein localization to chromatin during meiosis I","termid":"FYPO:0006161"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during meiotic cell cycle","termid":"FYPO:0006529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to centromere central core during meiosis I","synonyms":[{"name":"abolished protein localisation to centromere central core during meiosis I","type":"exact"},{"name":"abolished protein localisation to chromatin at centromere central core during meiosis I","type":"exact"},{"name":"abolished protein localization to centromere central core during first meiotic nuclear division","type":"exact"},{"name":"abolished protein localization to chromatin at centromere central core during meiosis I","type":"exact"},{"name":"protein localization to centromere central core abolished during meiosis I","type":"exact"},{"name":"protein localization to chromatin at centromere central core abolished during meiosis I","type":"exact"}],"termid":"FYPO:0006457"}


id: MONDO:0018931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mucolipidosis III alpha/beta (MLIII alpha/beta) is a lysosomal disorder characterized by progressive slowing of the growth rate from early childhood, stiffness and pain in joints, gradual coarsening of facial features, moderate developmental delay and mild intellectual disability in most patients.","definition_xrefs":["PMID:6461005","Orphanet:423461"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bone disorder","termid":"MONDO:0005381"},{"relation_name":"is_a","term_name":"familial mucolipidosis","termid":"MONDO:0031422"},{"relation_name":"is_a","term_name":"GNPTAB-mucolipidosis","termid":"MONDO:0100122"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"mucolipidosis type III, alpha/beta","secondary_identifiers":["MEDGEN:10988","NANDO:2200568","Orphanet:577","DOID:0080071","GARD:17704","NORD:1624","UMLS:C0033788","SCTID:65764006","OMIM:252600","NANDO:1200125"],"synonyms":[{"name":"ML 3","type":"broad"},{"name":"ML 3 A","type":"related"},{"name":"ML 3 Alpha/Beta","type":"related"},{"name":"ML 3 alpha/beta","type":"exact"},{"name":"ML III alpha/beta","type":"exact"},{"name":"ML3","type":"broad"},{"name":"MLIII","type":"exact"},{"name":"Pseudo Hurler Polydystrophy","type":"exact"},{"name":"mucolipidosis 3","type":"broad"},{"name":"mucolipidosis 3 Alpha/Beta","type":"related"},{"name":"mucolipidosis 3 Alpha/Beta, atypical","type":"related"},{"name":"mucolipidosis 3A","type":"related"},{"name":"mucolipidosis III","type":"broad"},{"name":"mucolipidosis III ALPHA/BETA","type":"related"},{"name":"mucolipidosis type 3 alpha/beta","type":"exact"},{"name":"mucolipidosis type 3A","type":"related"},{"name":"mucolipidosis type III","type":"exact"},{"name":"mucolipidosis type III alpha/beta","type":"related"},{"name":"pseudo-Hurler polydystrophy","type":"exact"}],"termid":"MONDO:0018931","xrefs":{"Monarch":{"xref_id":"0018931"}}}


id: PBO:0090756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3074 family protein, implicated in vesicle trafficking or lipid metabolism","termid":"PBO:0090756"}


id: PBO:0086517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; null mutant displays elevated sensitivity to expression of a mutant huntingtin fragment or of alpha-synuclein","termid":"PBO:0086517"}


id: PBO:0052776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 68","termid":"PBO:0052776"}


id: PBO:0017759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidoreductase involved in NADPH regeneration (predicted)","termid":"PBO:0017759"}


id: MONDO:0043267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Necrotizing VASCULITIS of small and medium size vessels, developing as a complication in RHEUMATOID ARTHRITIS patients. It is characterized by peripheral vascular lesions, cutaneous ulcers, peripheral gangrene, and mononeuritis multiplex.","definition_xrefs":["MESH:D056653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatoid arthritis","termid":"MONDO:0008383"},{"relation_name":"is_a","term_name":"autoimmune vasculitis","termid":"MONDO:0030703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"rheumatoid vasculitis","secondary_identifiers":["icd11.foundation:1398254566","MEDGEN:69122","GARD:7577","NANDO:1200265","SCTID:400054000","UMLS:C0240903"],"synonyms":[{"name":"Vasculitides, rheumatoid","type":"related"},{"name":"rheumatoid Vasculitides","type":"related"},{"name":"rheumatoid vasculitis","type":"exact"},{"name":"vasculitis, rheumatoid","type":"related"}],"termid":"MONDO:0043267","xrefs":{"Monarch":{"xref_id":"0043267"}}}


id: PBO:0088603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase","termid":"PBO:0088603"}


id: MONDO:0007506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsoleted echo virus 11 sensitivity (obsolete MONDO:0007506)","secondary_identifiers":["MESH:C565071","OMIM:129150"],"synonyms":[{"name":"E11S","type":"related"},{"name":"echo virus 11 sensitivity","type":"exact"}],"termid":"MONDO:0007506","xrefs":{"Monarch":{"xref_id":"0007506"}}}


id: MONDO:0009646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial monosomy 7 syndrome","termid":"MONDO:0044645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"monosomy 7 myelodysplasia and leukemia syndrome 1","secondary_identifiers":["NCIT:C176908","GARD:18505","MEDGEN:381529","MESH:C565370","UMLS:C1854978","OMIM:252270"],"synonyms":[{"name":"M7MLS1","type":"exact"},{"name":"chromosome 7Q deletion","type":"exact"},{"name":"monosomy 7 of bone marrow","type":"exact"},{"name":"myelodysplasia and leukaemia syndrome with monosomy 7","type":"exact"},{"name":"myelodysplasia and leukemia syndrome with monosomy 7","type":"exact"}],"termid":"MONDO:0009646","xrefs":{"Monarch":{"xref_id":"0009646"}}}


id: PBO:0075841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 like 2","termid":"PBO:0075841"}


id: FYPO:0002795
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains fewer, but larger, vacuoles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large vacuoles during vegetative growth","termid":"FYPO:0000123"},{"relation_name":"is_a","term_name":"vacuoles present in decreased numbers during vegetative growth","termid":"FYPO:0002793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"large vacuoles present in decreased numbers during vegetative growth","synonyms":[{"name":"enlarged vacuoles present in decreased numbers during vegetative growth","type":"exact"},{"name":"large vacuoles present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"large vacuoles present in reduced numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0002795"}


id: MONDO:0009045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cataract - nephropathy - encephalopathy syndrome describes a lethal combination of manifestations including short stature, congenital cataracts, encephalopathy with epileptic fits, and postmortem confirmation of nephropathy (renal tubular necrosis). The combination of cataract - nephropathy - encephalopathy has been described in 2 female infant children of first cousin parents. The infants did not survive beyond 4 and 8 months respectively. There have been no further descriptions in the literature since 1963.","definition_xrefs":["Orphanet:1380"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cataract-nephropathy-encephalopathy syndrome","secondary_identifiers":["GARD:1614","MEDGEN:167082","UMLS:C0795914","MESH:C536216","OMIM:218900","SCTID:722381004"],"synonyms":[{"name":"congenital cataracts, renal tubular necrosis and encephalopathy in two sisters","type":"related"},{"name":"crome syndrome","type":"exact"}],"termid":"MONDO:0009045","xrefs":{"Monarch":{"xref_id":"0009045"}}}


id: PBO:0046934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 50 member B","termid":"PBO:0046934"}


id: PBO:0041633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1C antisense RNA 3","termid":"PBO:0041633"}


id: MONDO:0014188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0014188 (obsolete MONDO:0014188)","termid":"MONDO:0014188","xrefs":{"Monarch":{"xref_id":"0014188"}}}


id: PBO:0018096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"borate transmembrane transporter (predicted)","termid":"PBO:0018096"}


id: PBO:0012038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat protein, involved in ribosomal large subunit biogenesis (predicted)","termid":"PBO:0012038"}


id: FYPO:0003949
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of sulfite reductase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal sulfite reductase activity","termid":"FYPO:0003948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"decreased sulfite reductase activity","synonyms":[{"name":"decreased sulphite reductase activity","type":"exact"},{"name":"reduced sulfite reductase activity","type":"exact"}],"termid":"FYPO:0003949"}


id: PBO:0044384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily A member 7 pseudogene 1","termid":"PBO:0044384"}


id: GO:0003189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the aortic valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve formation","termid":"GO:0003188"},{"relation_name":"part_of","term_name":"aortic valve morphogenesis","termid":"GO:0003180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aortic valve formation","termid":"GO:0003189"}


id: GO:0021695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cerebellar cortex over time, from its formation to the mature structure. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function.","definition_xrefs":["GOC:jid","ISBN:0838580343","GOC:dgh","GOC:cls","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"cerebellum development","termid":"GO:0021549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar cortex development","termid":"GO:0021695"}


id: GO:0044504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the activity of a receptor in a second organism.","definition_xrefs":["GOC:fj","PMID:8405712","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of receptor activity in another organism (obsolete GO:0044504)","synonyms":[{"name":"modulation of receptor activity in other organism","type":"exact"}],"termid":"GO:0044504"}


id: MONDO:0007806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypotrichosis 4 (obsolete MONDO:0007806)","termid":"MONDO:0007806","xrefs":{"Monarch":{"xref_id":"0007806"}}}


id: FYPO:0005754
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of (1->3)-alpha-D-glucan measured in the periplasmic space is greater than normal.","definition_xrefs":["PMID:11514435","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polysaccharide level during vegetative growth","termid":"FYPO:0001083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased (1->3)-alpha-D-glucan level in periplasmic space","synonyms":[{"name":"increased (1,3)alpha-D-glucan level in periplasmic space","type":"exact"},{"name":"increased (1->3)-alpha-D-glucan accumulation in periplasmic space","type":"related"},{"name":"increased (1->3)-alpha-D-glucan level in periplasmic space during mitotic cell cycle","type":"related"},{"name":"increased (1->3)-alpha-D-glucan level in periplasmic space during vegetative growth","type":"exact"},{"name":"increased 1,3-alpha-D-glucan level in periplasmic space","type":"exact"},{"name":"increased level of (1->3)-alpha-D-glucan in periplasmic space","type":"exact"}],"termid":"FYPO:0005754"}


id: GO:1990044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location on or within a lipid droplet.","definition_xrefs":["GOC:sart","PMID:22505614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to lipid droplet","synonyms":[{"name":"protein localisation to adiposome","type":"exact"},{"name":"protein localisation to lipid body","type":"exact"},{"name":"protein localisation to lipid droplet","type":"exact"},{"name":"protein localisation to lipid particle","type":"exact"},{"name":"protein localization to adiposome","type":"exact"},{"name":"protein localization to lipid body","type":"exact"},{"name":"protein localization to lipid particle","type":"exact"}],"termid":"GO:1990044"}


id: MONDO:0014078
data:
  {"annotated_genes":["SJAG_04621"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86977],"is_not":false,"summary":null,"term":"MONDO:0014078"}]},"cv_name":"mondo","definition":"Any inherited bleeding disorder, platelet-type in which the cause of the disease is a mutation in the ACTN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"autosomal dominant macrothrombocytopenia","termid":"MONDO:0015372"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"platelet-type bleeding disorder 15","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111053","NANDO:2200665","MEDGEN:767577","GARD:18272","OMIM:615193","UMLS:C3554663"],"synonyms":[{"name":"ACTN1 inherited bleeding disorder, platelet-type","type":"exact"},{"name":"BDPLT15","type":"exact"},{"name":"autosomal dominant macrothrombocytopenia ACTN1-related","type":"exact"},{"name":"bleeding disorder, platelet-type, 15","type":"related"},{"name":"inherited bleeding disorder, platelet-type caused by mutation in ACTN1","type":"exact"},{"name":"macrothrombocytopenia, autosomal dominant, ACTN1-related","type":"related"},{"name":"platelet-type bleeding disorder 15","type":"exact"}],"termid":"MONDO:0014078","terms_by_termid":{"MONDO:0014078":null},"xrefs":{"Monarch":{"xref_id":"0014078"}}}


id: PBO:0004164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L39 (predicted)","termid":"PBO:0004164"}


id: GO:0060050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the glycosylation of one or more amino acid residues within a protein. Protein glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins.","definition_xrefs":["GOC:pr","GOC:dph","GOC:dms"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glycoprotein biosynthetic process","termid":"GO:0010560"},{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"regulation of protein glycosylation","termid":"GO:0060049"},{"relation_name":"positively_regulates","term_name":"protein glycosylation","termid":"GO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein glycosylation","synonyms":[{"name":"positive regulation of protein amino acid glycosylation","type":"exact"}],"termid":"GO:0060050"}


id: PBO:0072635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras suppressor protein 1 pseudogene 1","termid":"PBO:0072635"}


id: FYPO:0000246
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a cell population grows only in the presence of an antioxidant in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for antioxidant","synonyms":[{"name":"antioxidant required for cell population growth","type":"exact"},{"name":"antioxidant required for growth","type":"exact"},{"name":"antioxidant required for vegetative cell growth","type":"exact"},{"name":"growth defect, requires antioxidant for growth","type":"exact"}],"termid":"FYPO:0000246"}


id: RO:0002008
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation that holds between two linear structures that are approximately parallel to each other for their entire length and where either the two structures are adjacent to each other or one is part of the other.","direct_ancestors":[{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"RO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coincident_with","termid":"RO:0002008"}


id: PBO:0066527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2 like and GRIP domain containing 3","termid":"PBO:0066527"}


id: GO:0051175
data:
  {"annotated_genes":["SJAG_01187","SJAG_02380"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117484,113358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving sulfur or compounds containing sulfur.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"negatively_regulates","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_02380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"negative regulation of sulfur metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of sulfur metabolic process","type":"exact"},{"name":"down-regulation of sulfur metabolic process","type":"exact"},{"name":"downregulation of sulfur metabolic process","type":"exact"},{"name":"inhibition of sulfur metabolic process","type":"narrow"},{"name":"negative regulation of sulfur metabolism","type":"exact"},{"name":"negative regulation of sulphur metabolic process","type":"exact"},{"name":"negative regulation of sulphur metabolism","type":"exact"}],"termid":"GO:0051175","terms_by_termid":{"GO:2001211":null}}


id: PBO:0081146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP64 zinc finger protein pseudogene 1","termid":"PBO:0081146"}


id: GO:0032084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a type I restriction endodeoxyribonuclease activity.","definition_xrefs":["GOC:dph","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of type I site-specific deoxyribonuclease activity (obsolete GO:0032084)","synonyms":[{"name":"regulation of type I restriction endodeoxyribonuclease activity","type":"exact"},{"name":"type I restriction endodeoxyribonuclease regulator","type":"related"},{"name":"type I restriction enzyme regulator","type":"related"}],"termid":"GO:0032084"}


id: GO:0140922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of thermomorphogenesis.","definition_xrefs":["PMID:27250752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of post-embryonic development","termid":"GO:0048582"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of thermomorphogenesis","termid":"GO:0140920"},{"relation_name":"positively_regulates","term_name":"thermomorphogenesis","termid":"GO:0140919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of thermomorphogenesis","termid":"GO:0140922"}


id: PR:O74804
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- est1 gene.","definition_xrefs":["UniProtKB:O74804","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere elongation protein est1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.13","synonyms":[{"name":"Spom972h-est1","type":"exact"},{"name":"ever shorter telomeres protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74804"}


id: PBO:0038649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA oxidase like","termid":"PBO:0038649"}


id: FYPO:0003993
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to menadione is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during cellular response to menadione","synonyms":[{"name":"decreased RNA accumulation during cellular response to menadione","type":"related"},{"name":"decreased RNA level during cellular response to menadione during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to menadione during vegetative growth","type":"exact"},{"name":"decreased transcript level during cellular response to menadione","type":"exact"},{"name":"reduced RNA level during cellular response to menadione","type":"exact"}],"termid":"FYPO:0003993"}


id: GO:0036314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sterol stimulus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to sterol","termid":"GO:0036314"}


id: PBO:0083931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fusion protein cleaved to yield ribosomal protein S31 and ubiquitin; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; interacts genetically with translation factor eIF2B; homologous to mammalian ribosomal protein S27A, no bacterial homolog","termid":"PBO:0083931"}


id: GO:0003254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of membrane depolarization. Membrane depolarization is the process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"membrane depolarization","termid":"GO:0051899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane depolarization","termid":"GO:0003254"}


id: PBO:0016055
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mating type Auxiliary Plus","termid":"PBO:0016055"}


id: PBO:0066630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory subunit of type II PKA R-subunit domain containing 1","termid":"PBO:0066630"}


id: MONDO:0010878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant spastic paraplegia type 6 (SPG6) is a form of hereditary spastic paraplegia which usually presents in late adolescence or early adulthood as a pure phenotype of lower limb spasticity with hyperreflexia and extensor plantar responses, as well as mild bladder disturbances and pes cavus. Rarely, it can present as a complex phenotype with additional manifestations including epilepsy, variable peripheral neuropathy and/or memory impairment.","definition_xrefs":["Orphanet:100988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 6","secondary_identifiers":["SCTID:732949006","UMLS:C1838192","MESH:C536866","OMIM:600363","DOID:0110811","GARD:4928","MEDGEN:324965"],"synonyms":[{"name":"FSP3","type":"exact"},{"name":"NIPA1 hereditary spastic paraplegia","type":"exact"},{"name":"SPG6","type":"exact"},{"name":"autosomal dominant familial spastic paraplegia type 3","type":"exact"},{"name":"autosomal dominant spastic paraplegia 6","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 6","type":"exact"},{"name":"familial spastic paraplegia autosomal dominant 3","type":"related"},{"name":"familial spastic paraplegia, autosomal dominant, 3","type":"related"},{"name":"hereditary spastic paraplegia caused by mutation in NIPA1","type":"exact"},{"name":"hereditary spastic paraplegia type 6","type":"exact"},{"name":"spastic paraplegia 6","type":"related"},{"name":"spastic paraplegia 6, autosomal dominant","type":"related"}],"termid":"MONDO:0010878","xrefs":{"Monarch":{"xref_id":"0010878"}}}


id: PBO:0061839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid growth factor receptor pseudogene 1","termid":"PBO:0061839"}


id: PATO:0001555
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The number of parts of a particular type that the bearer entity has. This is a relational quality, and thus holds between two entities: the bearer of the quality, and the type of parts.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has number of","secondary_identifiers":["OBO_REL:has_part"],"synonyms":[{"name":"cardinality","type":"related"},{"name":"extra or missing physical or functional parts","type":"exact"},{"name":"has or lacks parts of type","type":"exact"},{"name":"mereological quality","type":"exact"},{"name":"number","type":"related"},{"name":"number of","type":"exact"}],"termid":"PATO:0001555"}


id: PBO:0050212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 29","termid":"PBO:0050212"}


id: PBO:0058623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6755","termid":"PBO:0058623"}


id: PBO:0080455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and transmembrane domain containing 2A","termid":"PBO:0080455"}


id: PBO:0082141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Activator of Chs3p (chitin synthase III) during vegetative growth; recruits Chs3p to the bud neck via interaction with Bni4p; SKT5 has a paralog, SHC1, that arose from the whole genome duplication","termid":"PBO:0082141"}


id: GO:0015983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of solute translocation in which two solutes equilibrate across an osmotic barrier, and the translocation of one solute is coupled to the translocation of the other in the same direction.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete symport (obsolete GO:0015983)","synonyms":[{"name":"symport","type":"exact"}],"termid":"GO:0015983"}


id: GO:0061398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter in response to an copper ion stimulus.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to copper ion (obsolete GO:0061398)","termid":"GO:0061398"}


id: MONDO:0021193
data:
  {"annotated_genes":["SJAG_04213","SJAG_01111"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89170,89169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"}]},"cv_name":"mondo","definition":"A neoplasm of the nervous system that arises from the neuroepithelial tissues. Representative examples include astrocytic tumors, oligodendroglial tumors, ependymal tumors, and primitive neuroectodermal tumors.","definition_xrefs":["NCIT:C3787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system neoplasm","termid":"MONDO:0021248"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_04213":null},"genotype_count":0,"is_obsolete":false,"name":"neuroepithelial neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ONCOTREE:PRNET","MEDGEN:60215","MESH:D018302","UMLS:C0206715"],"synonyms":[{"name":"neoplasm of neuroepithelial tissue","type":"exact"},{"name":"neoplasm of neuroepithelium","type":"exact"},{"name":"neoplasm of the neuroepithelium","type":"exact"},{"name":"neuroepithelial neoplasm","type":"exact"},{"name":"neuroepithelial neoplasms","type":"exact"},{"name":"neuroepithelial tissue neoplasm","type":"exact"},{"name":"neuroepithelial tissue tumor","type":"exact"},{"name":"neuroepithelial tissue tumour","type":"exact"},{"name":"neuroepithelial tumor","type":"exact"},{"name":"neuroepithelial tumors","type":"exact"},{"name":"neuroepithelial tumour","type":"exact"},{"name":"neuroepithelial tumours","type":"exact"},{"name":"primary neuroepithelial tumor","type":"related"},{"name":"primary neuroepithelial tumour","type":"related"},{"name":"tumor of neuroepithelial tissue","type":"exact"},{"name":"tumor of neuroepithelium","type":"exact"},{"name":"tumor of the neuroepithelium","type":"exact"},{"name":"tumour of neuroepithelial tissue","type":"exact"},{"name":"tumour of neuroepithelium","type":"exact"},{"name":"tumour of the neuroepithelium","type":"exact"}],"termid":"MONDO:0021193","terms_by_termid":{"MONDO:0024517":null},"xrefs":{"Monarch":{"xref_id":"0021193"}}}


id: PBO:0062046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 33","termid":"PBO:0062046"}


id: GO:1990644
data:
  {"annotated_genes":["SJAG_00207","SJAG_00646"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89864,113672],"is_not":false,"summary":null,"term":"GO:1990644"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that attaches the spindle microtubules to the kinetochore.","definition_xrefs":["PMID:20723757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00207":null,"SJAG_00646":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0003674","GO:0030674","GO:0060090"],"is_obsolete":false,"name":"microtubule site clamp","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990644","terms_by_termid":{"GO:1990644":null}}


id: PBO:0044358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 45","termid":"PBO:0044358"}


id: GO:0052125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on or near its host organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete energy taxis on or near host (obsolete GO:0052125)","termid":"GO:0052125"}


id: PBO:0108581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat protein, human ATXN10 ortholog","termid":"PBO:0108581"}


id: GO:0008658
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to penicillin, an antibiotic that contains the condensed beta-lactamthiazolidine ring system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"penicillin binding","termid":"GO:0008658"}


id: SO:0000385
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The RNA molecule essential for the catalytic activity of RNase MRP, an enzymatically active ribonucleoprotein with two distinct roles in eukaryotes. In mitochondria it plays a direct role in the initiation of mitochondrial DNA replication. In the nucleus it is involved in precursor rRNA processing, where it cleaves the internal transcribed spacer 1 between 18S and 5.8S rRNAs.","direct_ancestors":[{"relation_name":"is_a","term_name":"enzymatic_RNA","termid":"SO:0000372"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase_MRP_RNA","synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:RNase_MRP_RNA","type":"exact"},{"name":"RNase MRP RNA","type":"exact"}],"termid":"SO:0000385"}


id: PR:O14179
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome maturation protein SBDS that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10927:SF0","PRO:DNx","OMA:SCHPO01118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome maturation protein sdo1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.03","secondary_identifiers":["UniProtKB:O14179"],"synonyms":[{"name":"Spom972h-SBDS","type":"exact"}],"termid":"PR:O14179"}


id: PBO:0077618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymosin beta 4 Y-linked","termid":"PBO:0077618"}


id: PR:O74897
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swc5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWR1-complex protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.13","synonyms":[{"name":"Spom972h-swc5","type":"exact"}],"termid":"PR:O74897"}


id: MONDO:0014898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive progressive external ophthalmoplegia in which the cause of the disease is a mutation in the TK2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive external ophthalmoplegia with mitochondrial DNA deletions","termid":"MONDO:0000090"},{"relation_name":"is_a","term_name":"autosomal recessive progressive external ophthalmoplegia","termid":"MONDO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0002320","MONDO:0004069","MONDO:0005336","MONDO:0005066"],"is_obsolete":false,"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 3","secondary_identifiers":["GARD:16183","OMIM:617069","MEDGEN:934701","DOID:0111523","UMLS:C4310734"],"synonyms":[{"name":"PEOB3","type":"exact"},{"name":"TK2 autosomal recessive progressive external ophthalmoplegia","type":"exact"},{"name":"autosomal recessive progressive external ophthalmoplegia caused by mutation in TK2","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 3","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 3; PEOB3","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive type 3","type":"exact"},{"name":"progressive external ophthalmoplegia, autosomal recessive 3","type":"related"}],"termid":"MONDO:0014898","xrefs":{"Monarch":{"xref_id":"0014898"}}}


id: GO:0070164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of adiponectin from a cell.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of adiponectin secretion","termid":"GO:0070163"},{"relation_name":"negatively_regulates","term_name":"adiponectin secretion","termid":"GO:0070162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of adiponectin secretion","synonyms":[{"name":"down regulation of adiponectin secretion","type":"exact"},{"name":"down-regulation of adiponectin secretion","type":"exact"},{"name":"downregulation of adiponectin secretion","type":"exact"},{"name":"inhibition of adiponectin secretion","type":"narrow"}],"termid":"GO:0070164"}


id: GO:0045649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of macrophage differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte differentiation","termid":"GO:0002761"},{"relation_name":"regulates","term_name":"macrophage differentiation","termid":"GO:0030225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage differentiation","termid":"GO:0045649"}


id: PBO:0087135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein required for the assembly of box H/ACA snoRNPs; thus required for pre-rRNA processing; forms a complex with Shq1p and interacts with H/ACA snoRNP components Nhp2p and Cbf5p; similar to Gar1p","termid":"PBO:0087135"}


id: GO:0010866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of triglyceride biosynthesis. Triglyceride biosynthesis is the collection of chemical reactions and pathways resulting in the formation of triglyceride, any triester of glycerol.","definition_xrefs":["GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"is_a","term_name":"regulation of triglyceride metabolic process","termid":"GO:0090207"},{"relation_name":"regulates","term_name":"triglyceride biosynthetic process","termid":"GO:0019432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of triglyceride biosynthetic process","synonyms":[{"name":"regulation of triacylglycerol biosynthetic process","type":"exact"}],"termid":"GO:0010866"}


id: GO:0050036
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threonate + NAD+ = 3-dehydro-L-threonate + H+ + NADH.","definition_xrefs":["RHEA:23376","EC:1.1.1.129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"L-threonate 3-dehydrogenase activity","secondary_identifiers":["MetaCyc:L-THREONATE-3-DEHYDROGENASE-RXN","KEGG_REACTION:R03733"],"synonyms":[{"name":"L-threonate:NAD+ 3-oxidoreductase activity","type":"related"},{"name":"L-threonic acid dehydrogenase activity","type":"related"},{"name":"threonate dehydrogenase activity","type":"related"}],"termid":"GO:0050036"}


id: PR:Q10668
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swi2 gene.","definition_xrefs":["UniProtKB:Q10668","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type switching protein swi2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1142.03c","synonyms":[{"name":"Spom972h-swi2","type":"exact"}],"termid":"PR:Q10668"}


id: FYPO:0004106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, has no septum, and contains more than one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"inviable aseptate vegetative cell","termid":"FYPO:0003931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000032","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000004"],"is_obsolete":false,"name":"inviable multinucleate aseptate vegetative cell","synonyms":[{"name":"inviable multinucleate aseptate cell during vegetative growth","type":"exact"},{"name":"inviable multinucleate aseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; multinucleate aseptate vegetative cell","type":"exact"},{"name":"multinucleate aseptate inviable vegetative cell","type":"exact"}],"termid":"FYPO:0004106"}


id: PBO:0047171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 4","termid":"PBO:0047171"}


id: PBO:0091692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-methyltransferase, human COMT catechol homolog 1","termid":"PBO:0091692"}


id: FYPO:0001227
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the cytoplasm is observed there, during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to cytoplasm during cellular response to hydrogen peroxide","synonyms":[{"name":"ectopic protein localization to cytoplasm during cellular response to hydrogen peroxide","type":"exact"},{"name":"protein mislocalised to cytoplasm during cellular response to hydrogen peroxide","type":"exact"},{"name":"protein mislocalized to cytoplasm during cellular response to H2O2","type":"exact"},{"name":"protein mislocalized to cytoplasm during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to cytoplasm during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"protein mislocalized to cytoplasm in response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0001227"}


id: PBO:0081862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF793 antisense RNA 1 (head to head)","termid":"PBO:0081862"}


id: PBO:0068336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 44","termid":"PBO:0068336"}


id: PBO:0062850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otoancorin","termid":"PBO:0062850"}


id: PR:P87141
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A regulatory-associated protein of mTOR that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00613","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat-containing protein mip1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.11","secondary_identifiers":["UniProtKB:P87141"],"synonyms":[{"name":"Spom972h-RPTOR","type":"exact"}],"termid":"PR:P87141"}


id: GO:0022605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reproductive process that is a step in the formation and maturation of an ovum or female gamete from a primordial female germ cell.","definition_xrefs":["GOC:isa_complete","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammalian oogenesis stage","synonyms":[{"name":"mammalian oogenesis process","type":"exact"}],"termid":"GO:0022605"}


id: GO:0034769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled breakdown of the basement membrane in the context of a normal process such as imaginal disc eversion.","definition_xrefs":["PMID:17301221","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix disassembly","termid":"GO:0022617"},{"relation_name":"is_a","term_name":"basement membrane organization","termid":"GO:0071711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basement membrane disassembly","secondary_identifiers":["GO:0060881"],"synonyms":[{"name":"basal lamina disassembly","type":"related"}],"termid":"GO:0034769"}


id: GO:0047911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [(1->4)-alpha-D-galacturonide](n) + H2O = [(1->4)-alpha-D-galacturonide](n-1) + D-galacturonate.","definition_xrefs":["MetaCyc:GALACTURAN-14-ALPHA-GALACTURONIDASE-RXN","EC:3.2.1.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"galacturan 1,4-alpha-galacturonidase activity","secondary_identifiers":["RHEA:14117"],"synonyms":[{"name":"exo-D-galacturonanase activity","type":"related"},{"name":"exo-D-galacturonase activity","type":"exact"},{"name":"exo-polygalacturonase activity","type":"exact"},{"name":"exopoly-D-galacturonase activity","type":"exact"},{"name":"exopolygalacturonase activity","type":"related"},{"name":"galacturan alpha-1,4-galacturonidase activity","type":"exact"},{"name":"poly(1,4-alpha-D-galacturonide) galacturonohydrolase activity","type":"related"},{"name":"poly(galacturonate) hydrolase activity","type":"related"}],"termid":"GO:0047911"}


id: PBO:0050310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 12","termid":"PBO:0050310"}


id: GO:0098510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to detect high environmental humidity, convert this detection into a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["PMID:18269908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of humidity","termid":"GO:0098509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of high humidity","termid":"GO:0098510"}


id: GO:0005846
data:
  {"annotated_genes":["SJAG_01064","SJAG_01830","SJAG_04360"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72193,75072,117374],"is_not":false,"summary":null,"term":"GO:0005846"}]},"cv_name":"cellular_component","definition":"A conserved heterodimeric protein complex that binds to the 5' terminal cap structure m7G(5')ppp(5')N of nascent eukaryotic RNA polymerase II transcripts such as pre-mRNA and U snRNA. The consists of proteins known as CBP20 and CBP80, binds to cap structures in the nucleus, and is involved in pre-mRNA splicing, 3'-end formation, and RNA nuclear export.","definition_xrefs":["PMID:16043498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA cap binding complex","termid":"GO:0034518"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01064":null,"SJAG_01830":null,"SJAG_04360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nuclear cap binding complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"CBC","type":"related"},{"name":"NCBP-NIP1 complex","type":"narrow"},{"name":"mRNA cap binding complex","type":"narrow"},{"name":"nuclear CBC","type":"exact"},{"name":"snRNA cap binding complex","type":"narrow"}],"termid":"GO:0005846","terms_by_termid":{"GO:0005846":null}}


id: PBO:0070394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RORA antisense RNA 1","termid":"PBO:0070394"}


id: GO:0031235
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of a plasma membrane consisting of gene products and protein complexes that have some covalently attached part (e.g. peptide sequence or GPI anchor) which is embedded in the cytoplasmic side of the plasma membrane only.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of the cytoplasmic side of the plasma membrane (obsolete GO:0031235)","synonyms":[{"name":"intrinsic to cytoplasmic side of plasma membrane","type":"narrow"},{"name":"intrinsic to internal leaflet of plasma membrane","type":"exact"},{"name":"intrinsic to internal side of plasma membrane","type":"exact"}],"termid":"GO:0031235"}


id: MONDO:0021333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that involves the lip.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lip cancer","termid":"MONDO:0006834"},{"relation_name":"is_a","term_name":"oral cavity carcinoma","termid":"MONDO:0044925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"carcinoma of lip","secondary_identifiers":["MEDGEN:56195","SCTID:269515006","NCIT:C3490","UMLS:C0149637"],"synonyms":[{"name":"carcinoma of lip","type":"exact"},{"name":"carcinoma of the Lip","type":"exact"},{"name":"lip cancer","type":"broad"},{"name":"lip carcinoma","type":"exact"}],"termid":"MONDO:0021333","xrefs":{"Monarch":{"xref_id":"0021333"}}}


id: PR:Q9Y7R7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC306.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7R7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein C306.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.07c","synonyms":[{"name":"Spom972h-SPCC306.07c","type":"exact"},{"name":"U3 snoRNP-associated protein C306.07c (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7R7"}


id: PBO:0052685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 9","termid":"PBO:0052685"}


id: PBO:0087582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); APC/C is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; component of the platform domain of the APC/C, based on structural analysis; relative distribution to nuclear foci decreases upon DNA replication stress","termid":"PBO:0087582"}


id: PR:O14043
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csc4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2C4.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.10c","synonyms":[{"name":"Spom972h-csc4","type":"exact"}],"termid":"PR:O14043"}


id: GO:0060183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by apelin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"apelin receptor signaling pathway","synonyms":[{"name":"apelin receptor signalling pathway","type":"exact"}],"termid":"GO:0060183"}


id: PBO:0001083
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"active site mapping","termid":"PBO:0001083"}


id: GO:0075332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of adenylate cyclase-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont adenylate cyclase-mediated signal transduction (obsolete GO:0075332)","termid":"GO:0075332"}


id: PBO:0044254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CWF19 like cell cycle control factor 2","termid":"PBO:0044254"}


id: PBO:0064614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 5 homeobox 1 pseudogene 4","termid":"PBO:0064614"}


id: PBO:0091781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dubious protein, reverse strand of sno20","termid":"PBO:0091781"}


id: MONDO:0010625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency, X-linked, with deficiency of 115,000 Dalton surface glycoprotein","secondary_identifiers":["MEDGEN:326624","OMIM:308220","MESH:C564120","UMLS:C1839982"],"synonyms":[{"name":"Gpl115 deficiency","type":"related"},{"name":"immunodeficiency, X-linked, with deficiency of 115,000 Dalton surface glycoprotein","type":"exact"}],"termid":"MONDO:0010625","xrefs":{"Monarch":{"xref_id":"0010625"}}}


id: GO:0061884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mini excitatory postsynaptic potential. Mini excitatory postsynaptic potential is a process that leads to a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell, induced by the spontaneous release of a single vesicle of an excitatory neurotransmitter into the synapse.","definition_xrefs":["PMID:20395454","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of excitatory postsynaptic potential","termid":"GO:0098815"},{"relation_name":"regulates","term_name":"mini excitatory postsynaptic potential","termid":"GO:0098816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of mini excitatory postsynaptic potential","termid":"GO:0061884"}


id: PBO:0044533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystroglycan 1","termid":"PBO:0044533"}


id: GO:0047257
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-diacyl-3-O-(alpha-D-glucopyranosyl)-sn-glycerol + UDP-D-glucose = UDP + 1,2-diacyl-3-O-(alpha-D-glucopyranosyl(1,2)-O-alpha-D-glucopyranosyl)-sn-glycerol.","definition_xrefs":["MetaCyc:2.4.1.208-RXN","EC:2.4.1.208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"diglucosyl diacylglycerol synthase activity","secondary_identifiers":["RHEA:19165"],"synonyms":[{"name":"DGlcDAG synthase activity","type":"related"},{"name":"MGlcDAG (1->2) glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:1,2-diacyl-3-O-(alpha-D-glucopyranosyl)-sn-glycerol (1->2) glucosyltransferase activity","type":"related"},{"name":"diglucosyl diacylglycerol (DGlcDAG) synthase activity","type":"exact"},{"name":"monoglucosyl diacylglycerol (1->2) glucosyltransferase activity","type":"related"}],"termid":"GO:0047257"}


id: GO:0014835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized satellite cell acquires specialized features of a myoblast. This occurs as part of skeletal muscle regeneration. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["PMID:16607119","CL:0000056","GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast differentiation","termid":"GO:0045445"},{"relation_name":"part_of","term_name":"skeletal muscle tissue regeneration","termid":"GO:0043403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast differentiation involved in skeletal muscle regeneration","termid":"GO:0014835"}


id: PBO:0054285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1676","termid":"PBO:0054285"}


id: SO:0000449
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence of nucleotides or amino acids which, by design, has a \\\"random\\\" order of components, given a predetermined input frequency of these components.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synthetic_sequence","termid":"SO:0000351"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"random_sequence","synonyms":[{"name":"random sequence","type":"exact"}],"termid":"SO:0000449"}


id: PBO:0056144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-6-phosphate receptor, cation dependent","termid":"PBO:0056144"}


id: GO:0061785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An endopeptidase activity that uses peptidoglycan as a substrate.","definition_xrefs":["PMID:22748813","GOC:dph","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase activity","termid":"GO:0004175"},{"relation_name":"is_a","term_name":"peptidoglycan muralytic activity","termid":"GO:0061783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0008233","GO:0016787","GO:0140096","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"peptidoglycan endopeptidase activity","termid":"GO:0061785"}


id: MONDO:0700203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pestivirus infectious disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pestivirus infectious disease, non-human animal","termid":"MONDO:0700203","xrefs":{"Monarch":{"xref_id":"0700203"}}}


id: PBO:0070129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 43 pseudogene","termid":"PBO:0070129"}


id: FYPO:0001246
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hydrogen peroxide is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal RNA level during cellular response to hydrogen peroxide","synonyms":[{"name":"normal RNA accumulation during cellular response to hydrogen peroxide","type":"related"},{"name":"normal RNA level during cellular response to H2O2","type":"exact"},{"name":"normal RNA level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"normal mRNA level during cellular response to hydrogen peroxide","type":"narrow"},{"name":"normal transcript level during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0001246"}


id: PBO:0029837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-single_microtubule_bundle","termid":"PBO:0029837"}


id: FYPO:0007368
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell's energy charge higher than normal. Energy charge is a measure of energy available to the cell, as reflected in the ATP-ADP-AMP balance and defined as (ATP + 1/2 ADP)/(AMP + ADP + ATP).","definition_xrefs":["PMID:32319721","PMID:6027798","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased energy charge","termid":"FYPO:0007368"}


id: GO:0180026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a mitochondrial small ribosomal subunit.","definition_xrefs":["PMID:30467428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosomal small subunit assembly","termid":"GO:0000028"},{"relation_name":"part_of","term_name":"mitochondrial ribosome assembly","termid":"GO:0061668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0042254","GO:0008150"],"is_obsolete":false,"name":"mitochondrial small ribosomal subunit assembly","termid":"GO:0180026"}


id: MONDO:0005263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete unipolar depression (obsolete MONDO:0005263)","termid":"MONDO:0005263","xrefs":{"Monarch":{"xref_id":"0005263"}}}


id: MONDO:0957388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease, multisystem, infantile-onset","termid":"MONDO:0000213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune disease, multisystem, infantile-onset, 3","secondary_identifiers":["MEDGEN:1841236","OMIM:620430","UMLS:C5830600"],"termid":"MONDO:0957388","xrefs":{"Monarch":{"xref_id":"0957388"}}}


id: PR:P87109
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phospholipase DDHD2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C20G8.02, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G8.02","secondary_identifiers":["UniProtKB:P87109"],"synonyms":[{"name":"Spom972h-DDHD2","type":"exact"}],"termid":"PR:P87109"}


id: PBO:0028573
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-binucleate_monoseptate_cell_with_mitotic_cell_cycle_arrest_before_cell_separation","termid":"PBO:0028573"}


id: PBO:0033828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin-protein ligase Bpl1 (predicted)","termid":"PBO:0033828"}


id: MONDO:0060677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 1","termid":"MONDO:0016883"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1p35 deletion syndrome","secondary_identifiers":["UMLS:C4693669","MEDGEN:1632676","OMIM:617930"],"synonyms":[{"name":"chromosome 1p35 deletion syndrome","type":"exact"}],"termid":"MONDO:0060677","xrefs":{"Monarch":{"xref_id":"0060677"}}}


id: MONDO:0004367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the petroclival region.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull base meningioma","termid":"MONDO:0002998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"petroclival meningioma","secondary_identifiers":["MEDGEN:277511","NCIT:C5278","UMLS:C1335395","DOID:7818"],"termid":"MONDO:0004367","xrefs":{"Monarch":{"xref_id":"0004367"}}}


id: PBO:0042034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 88C","termid":"PBO:0042034"}


id: PBO:0073669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIRT1 regulating lncRNA tumor promoter","termid":"PBO:0073669"}


id: PBO:0030954
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_acetylation","termid":"PBO:0030954"}


id: GO:0102501
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannonate + NADP = NADPH + H+ + D-fructuronate.","definition_xrefs":["PMID:22925190","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D-fructuronate reductase activity","secondary_identifiers":["MetaCyc:RXN-14368"],"termid":"GO:0102501"}


id: GO:0018366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a mixture of the two possible enantiomers from the D- or L-enantiomer of a chiral amino acid.","definition_xrefs":["ISBN:0198506732","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid metabolic process","termid":"GO:0006520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150"],"is_obsolete":false,"name":"chiral amino acid racemization","termid":"GO:0018366"}


id: PBO:0040739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCR pseudogene 5","termid":"PBO:0040739"}


id: GO:0042082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a glycosylsphingolipidinositol (GSI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The sphingolipid group is linked, via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via a ethanolamine phosphate group, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GSI anchors have variants on this canonical linkage.","definition_xrefs":["GOC:jsg","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete GSI anchor biosynthetic process (obsolete GO:0042082)","synonyms":[{"name":"GPI/GSI anchor biosynthesis","type":"broad"},{"name":"GPI/GSI anchor biosynthetic process","type":"broad"},{"name":"GSI anchor anabolism","type":"exact"},{"name":"GSI anchor biosynthesis","type":"exact"},{"name":"GSI anchor formation","type":"exact"},{"name":"GSI anchor synthesis","type":"exact"}],"termid":"GO:0042082"}


id: PBO:0051120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR15-5 (non-functional)","termid":"PBO:0051120"}


id: PBO:0088515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S7","termid":"PBO:0088515"}


id: PBO:0030896
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transport_phenotype_during_vegetative_growth","termid":"PBO:0030896"}


id: PBO:0061930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily K member 1","termid":"PBO:0061930"}


id: GO:0150201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transport across blood-brain barrier.","definition_xrefs":["PMID:30280653","PMID:29377008","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of transport across blood-brain barrier","termid":"GO:0150200"},{"relation_name":"part_of","term_name":"positive regulation of vascular permeability","termid":"GO:0043117"},{"relation_name":"positively_regulates","term_name":"transport across blood-brain barrier","termid":"GO:0150104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transport across blood-brain barrier","termid":"GO:0150201"}


id: GO:0061927
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein transport macromolecular complex of the chloroplast membrane that interacts with the precursor proteins and contains components of both the outer membrane and inner membrane complexes containing at least Toc75, Toc159, Toc34 and Tic110.","definition_xrefs":["PMID:28745032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"TOC-TIC supercomplex I","termid":"GO:0061927"}


id: MONDO:1012244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rod-cone degeneration, non-human animal","termid":"MONDO:1011981"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rod-cone degeneration, domestic guinea pig","secondary_identifiers":["OMIA:000880-10141"],"termid":"MONDO:1012244","xrefs":{"Monarch":{"xref_id":"1012244"}}}


id: MONDO:0015765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital myopathy with cores (obsolete MONDO:0015765)","secondary_identifiers":["Orphanet:172976"],"termid":"MONDO:0015765","xrefs":{"Monarch":{"xref_id":"0015765"}}}


id: GO:0102584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanidin 3-O-[2''-O-xylosyl) 6''-O-(p-coumaroyl) glucoside + UDP-alpha-D-glucose = cyanidin 3-O-[2''-O-(xylosyl)-6''-O-(p-coumaroyl) glucoside] 5-O-glucoside + UDP + H+.","definition_xrefs":["PMID:15807784","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 3-O-[2''-O-(xylosyl)-6''-O-(p-coumaroyl) glucoside] 5-O-glucosyltransferase activity (obsolete GO:0102584)","termid":"GO:0102584"}


id: GO:0004805
data:
  {"annotated_genes":["SJAG_01862","SJAG_01646"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75709,81684],"is_not":false,"summary":null,"term":"GO:0004805"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha,alpha-trehalose 6-phosphate + H2O = alpha,alpha-trehalose + phosphate.","definition_xrefs":["RHEA:23420","EC:3.1.3.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar-phosphatase activity","termid":"GO:0050308"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01646":null,"SJAG_01862":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"trehalose-phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:TREHALOSEPHOSPHA-RXN"],"synonyms":[{"name":"trehalose 6-phosphatase activity","type":"related"},{"name":"trehalose 6-phosphate phosphatase activity","type":"related"},{"name":"trehalose phosphatase activity","type":"exact"},{"name":"trehalose-6-phosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0004805","terms_by_termid":{"GO:0004805":null}}


id: PBO:0054724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2133","termid":"PBO:0054724"}


id: MONDO:1011363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ulcer disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ulcer disease, non-human animal","termid":"MONDO:1011363","xrefs":{"Monarch":{"xref_id":"1011363"}}}


id: MONDO:0019720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A renal or urinary tract malformation that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"congenital anomaly of kidney and urinary tract","termid":"MONDO:0019719"}],"gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic renal or urinary tract malformation (obsolete MONDO:0019720)","secondary_identifiers":["Orphanet:93546"],"synonyms":[{"name":"isolated congenital anomaly of kidney and urinary tract","type":"exact"},{"name":"isolated renal or urinary tract malformation","type":"related"},{"name":"nonsyndromic congenital anomaly of kidney and urinary tract","type":"exact"},{"name":"nonsyndromic renal or urinary tract malformation","type":"exact"}],"termid":"MONDO:0019720","xrefs":{"Monarch":{"xref_id":"0019720"}}}


id: PBO:0002252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA R62 (predicted)","termid":"PBO:0002252"}


id: MONDO:1012556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitral valve dysplasia, non-human animal","termid":"MONDO:1011652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitral valve dysplasia, ass","secondary_identifiers":["OMIA:002521-9793"],"termid":"MONDO:1012556","xrefs":{"Monarch":{"xref_id":"1012556"}}}


id: PBO:0044413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily R member 1","termid":"PBO:0044413"}


id: GO:0032100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases appetite.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to food","termid":"GO:0032097"},{"relation_name":"is_a","term_name":"regulation of appetite","termid":"GO:0032098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of appetite","synonyms":[{"name":"activation of appetite","type":"narrow"},{"name":"appetite stimulation","type":"related"},{"name":"positive regulation of hunger","type":"related"},{"name":"stimulation of appetite","type":"narrow"},{"name":"up regulation of appetite","type":"exact"},{"name":"up-regulation of appetite","type":"exact"},{"name":"upregulation of appetite","type":"exact"}],"termid":"GO:0032100"}


id: PBO:0067982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 284","termid":"PBO:0067982"}


id: MOD:00298
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-cysteine residues, an L-glutamic acid residue, an L-histidine residue, an L-serine residue and a one-nickel three-iron three-sulfur three-oxygen cluster to tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide.","definition_xrefs":["RESID:AA0293","PubMed:2550436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"nickel containing modified residue","termid":"MOD:00741"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-serine residue","termid":"MOD:02072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide","synonyms":[{"name":"Ni-3Fe-2S-3O cluster","type":"exact"},{"name":"carbon monoxide dehydrogenase nickel-iron cofactor","type":"exact"},{"name":"hybrid nickel-triiron cluster","type":"exact"},{"name":"mu-1:2kappaO-oxido-mu-1:3kappaO-oxido-mu-2:4kappaO-oxido-mu-3:4kappaS-sulfido-mu3-2:3:4kappaS-sulfido-S-cysteinyl-N1'-histidino-O5-glutamato 1-iron-S5-cysteine persulfido-O3-serinyl 2-nickel-3,4-bis-(S-cysteinyl iron)","type":"exact"},{"name":"tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide","type":"exact"}],"termid":"MOD:00298"}


id: MONDO:0019344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Antisynthetase (AS) syndrome is a clinically heterogeneous form of idiopathic inflammatory myopathy characterized by myositis, arthralgia, Raynaud phenomenon, mechanic hands, interstitial lung disease (ILD), and serum autoantibodies to aminoacyl transfer RNA synthetases (anti-ARS).","definition_xrefs":["Orphanet:81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired idiopathic inflammatory myopathy","termid":"MONDO:0020122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"antisynthetase syndrome","secondary_identifiers":["ICD9:279.49","UMLS:C2609059","DOID:0080744","icd11.foundation:1572057936","MEDGEN:388567","MESH:C537778","EFO:1001982","NORD:1926","GARD:735","MedDRA:10068801","SCTID:445187004"],"synonyms":[{"name":"AS syndrome","type":"exact"},{"name":"anti-Jo1 syndrome","type":"exact"}],"termid":"MONDO:0019344","xrefs":{"Monarch":{"xref_id":"0019344"}}}


id: PBO:0080163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variable charge Y-linked","termid":"PBO:0080163"}


id: MOD:01858
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(N-acetylamino)glucosyl-L-cysteine.","definition_xrefs":["PubMed:21251913","ChEBI:61631","PubMed:21395300","RESID:AA0560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycosylated residue","termid":"MOD:00426"},{"relation_name":"is_a","term_name":"N-acetylaminoglucosylated residue","termid":"MOD:00448"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"},{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00905","MOD:00764"],"is_obsolete":false,"name":"S-(N-acetylamino)glucosyl-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-(2-acetamido-2-deoxy-beta-D-glucopyranosylsulfanyl)propanoic acid","type":"exact"},{"name":"CARBOHYD S-linked (GlcNAc) cysteine","type":"exact"},{"name":"S-(N-acetylamino)glucosyl-L-cysteine","type":"exact"},{"name":"S-[(N-acetylamino)glycosyl]cysteine","type":"exact"},{"name":"S-[beta-D-(N-acetylamino)glucopyranosyl]cysteine","type":"exact"}],"termid":"MOD:01858"}


id: PBO:0028858
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mRNA_splicing,_via_spliceosome","termid":"PBO:0028858"}


id: PBO:0075663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin beta, non-erythrocytic 4","termid":"PBO:0075663"}


id: GO:0072171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a mesonephric tubule are generated and organized. A mesonephric tubule is an epithelial tube that is part of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule morphogenesis","termid":"GO:0072078"},{"relation_name":"part_of","term_name":"mesonephric tubule development","termid":"GO:0072164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric tubule morphogenesis","termid":"GO:0072171"}


id: GO:0052655
data:
  {"annotated_genes":["SJAG_04149"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112417],"is_not":false,"summary":null,"term":"GO:0052655"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-valine = 3-methyl-2-oxobutanoic acid + L-glutamatic acid.","definition_xrefs":["RHEA:24813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain-amino-acid transaminase activity","termid":"GO:0004084"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04149":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"L-valine-2-oxoglutarate transaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01214","MetaCyc:BRANCHED-CHAINAMINOTRANSFERVAL-RXN"],"synonyms":[{"name":"L-valine aminotransferase activity","type":"exact"}],"termid":"GO:0052655","terms_by_termid":{"GO:0052655":null}}


id: MONDO:0009079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"DOORS syndrome (also known as DOOR syndrome) is a multiple congenital anomalies-intellectual disability syndrome characterized by sensorineural hearing loss (deafness), onychodystrophy, osteodystrophy, mild to profound intellectual disability, and seizures. Isolated seizure disorders and isolated hearing loss have also been reported in individuals as a proposed spectrum of DOORS syndrome.","definition_xrefs":["PMID:24291220","PMID:24729547","PMID:25557349","PMID:26371875","PMID:24729539","PMID:25769375","Orphanet:79500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOORS syndrome","secondary_identifiers":["OMIM:220500","SCTID:719800009","DOID:0111627","MEDGEN:208648","MESH:C563052","NORD:1058","UMLS:C0795934","GARD:1685"],"synonyms":[{"name":"DOORS","type":"related"},{"name":"DOORS syndrome","type":"exact"},{"name":"Digitorenocerebral syndrome","type":"related"},{"name":"Eronen syndrome","type":"related"},{"name":"autosomal recessive deafness-onychodystrophy syndrome","type":"exact"},{"name":"brachydactyly due to absence of distal phalanges","type":"related"},{"name":"deafness onychodystrophy osteodystrophy and intellectual disability syndrome","type":"related"},{"name":"deafness onychodystrophy osteodystrophy and mental retardation syndrome","type":"related"},{"name":"deafness, onychodystrophy, osteodystrophy, intellectual disability, and seizures syndrome","type":"related"},{"name":"deafness, onychodystrophy, osteodystrophy, mental retardation, and seizures syndrome","type":"related"},{"name":"deafness-onychodystrophy-osteodystrophy-intellectual disability syndrome","type":"exact"},{"name":"deafness-onychodystrophy-osteodystrophy-intellectual disability-seizures syndrome","type":"exact"},{"name":"deafness-onychoosteodystrophy-intellectual disability syndrome","type":"exact"},{"name":"door syndrome","type":"exact"},{"name":"drc syndrome","type":"related"}],"termid":"MONDO:0009079","xrefs":{"Monarch":{"xref_id":"0009079"}}}


id: MONDO:0016742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor of the central nervous system characterized by the presence of at least two types of germ cell neoplasia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed extragonadal germ cell cancer","termid":"MONDO:0000524"},{"relation_name":"is_a","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"central nervous system germ cell tumor","termid":"MONDO:0003000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mixed germ cell tumor of central nervous system","secondary_identifiers":["Orphanet:252021","MEDGEN:233713","NCIT:C7016","UMLS:C1334785","GARD:20736"],"synonyms":[{"name":"CNS mixed germ cell tumor","type":"exact"},{"name":"CNS mixed germ cell tumour","type":"exact"},{"name":"central nervous system mixed germ cell tumor","type":"exact"},{"name":"central nervous system mixed germ cell tumour","type":"exact"},{"name":"mixed germ cell neoplasm of the central nervous system","type":"exact"},{"name":"mixed germ cell tumor of CNS","type":"exact"},{"name":"mixed germ cell tumor of the CNS","type":"exact"},{"name":"mixed germ cell tumor of the central nervous system","type":"exact"},{"name":"mixed germ cell tumour of CNS","type":"exact"},{"name":"mixed germ cell tumour of the CNS","type":"exact"},{"name":"mixed germ cell tumour of the central nervous system","type":"exact"}],"termid":"MONDO:0016742","xrefs":{"Monarch":{"xref_id":"0016742"}}}


id: MONDO:0010203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability, Wolff type is a rare intellectual disability syndrome characterized by severe intellectual disability, characteristic facial features (low anterior hairline, upward slanting palpebral fissures, ocular hypertelorism, broad, bulbous nose, large ears with helix incompletely developed, thick lips, and micrognathia) and additional anomalies including peripheral joint contractures, delayed skeletal maturation, bilateral cleft lip and palate, strabismus, terminal hypoplasia of fingers, hypospadias, and bilateral inguinal hernias.","definition_xrefs":["Orphanet:3080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"intellectual disability, Wolff type","secondary_identifiers":["MEDGEN:336345","OMIM:277990","MESH:C537448","UMLS:C1848439","GARD:3530"],"synonyms":[{"name":"WOLFF intellectual disability syndrome","type":"related"},{"name":"WOLFF mental retardation syndrome","type":"related"},{"name":"Wolff-Zimmermann syndrome","type":"exact"}],"termid":"MONDO:0010203","xrefs":{"Monarch":{"xref_id":"0010203"}}}


id: PBO:0068188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 495","termid":"PBO:0068188"}


id: GO:1902688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of NAD metabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:di","PMID:19846558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of purine nucleotide metabolic process","termid":"GO:1900542"},{"relation_name":"regulates","term_name":"NAD+ metabolic process","termid":"GO:0019674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of NAD metabolic process","synonyms":[{"name":"regulation of NAD (oxidized) metabolic process","type":"exact"},{"name":"regulation of NAD (oxidized) metabolism","type":"exact"},{"name":"regulation of NAD metabolism","type":"exact"},{"name":"regulation of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"regulation of nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"regulation of nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"regulation of oxidized NAD metabolic process","type":"exact"},{"name":"regulation of oxidized NAD metabolism","type":"exact"},{"name":"regulation of oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"regulation of oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"}],"termid":"GO:1902688"}


id: PBO:0059710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 18","termid":"PBO:0059710"}


id: PBO:0075898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST7 overlapping transcript 4","termid":"PBO:0075898"}


id: PBO:0063171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAXIP1 divergent transcript","termid":"PBO:0063171"}


id: RO:0002471
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"trophically_interacts_with","termid":"RO:0002438"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_eaten_by","termid":"RO:0002471"}


id: PBO:0074731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 89","termid":"PBO:0074731"}


id: GO:1990052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a lipid from the endoplasmic reticulum (ER) to the chloroplast.","definition_xrefs":["PMID:18689504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular lipid transport","termid":"GO:0032365"},{"relation_name":"is_a","term_name":"endoplasmic reticulum to chloroplast transport","termid":"GO:1901965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"ER to chloroplast lipid transport","synonyms":[{"name":"ER to chloroplast lipid trafficking","type":"exact"},{"name":"endoplasmic reticulum to chloroplast lipid transport","type":"exact"}],"termid":"GO:1990052"}


id: GO:0002701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of the production of molecular mediator of immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"regulation of production of molecular mediator of immune response","termid":"GO:0002700"},{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"negatively_regulates","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of production of molecular mediator of immune response","synonyms":[{"name":"down regulation of production of molecular mediator of immune response","type":"exact"},{"name":"down-regulation of production of molecular mediator of immune response","type":"exact"},{"name":"downregulation of production of molecular mediator of immune response","type":"exact"},{"name":"inhibition of production of molecular mediator of immune response","type":"narrow"}],"termid":"GO:0002701"}


id: PBO:0061430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group H member 3","termid":"PBO:0061430"}


id: PBO:0011436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposable element/transposon Tf2-type","termid":"PBO:0011436"}


id: PBO:0072166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15 pseudogene 3","termid":"PBO:0072166"}


id: PBO:0031339
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_thiabendazole","termid":"PBO:0031339"}


id: PBO:0046959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 81 member A","termid":"PBO:0046959"}


id: MONDO:0008196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Parastremmatic dwarfism is a very rare chondrodysplasia characterized by severe dwarfism, kyphoscoliosis, stiffness of large joints and distortion of lower limbs.","definition_xrefs":["Orphanet:2646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TRPV4-related bone disorder","termid":"MONDO:0018240"},{"relation_name":"is_a","term_name":"bent bone dysplasia","termid":"MONDO:0019698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parastremmatic dwarfism","secondary_identifiers":["MEDGEN:358366","SCTID:722210007","icd11.foundation:431936114","MESH:C537172","OMIM:168400","GARD:4222","UMLS:C1868616","DOID:0111539"],"synonyms":[{"name":"Parastremmatic dysplasia","type":"related"},{"name":"parastremmatic dwarfism","type":"exact"}],"termid":"MONDO:0008196","xrefs":{"Monarch":{"xref_id":"0008196"}}}


id: MONDO:0011994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the P2RX2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 41","secondary_identifiers":["OMIM:608224","UMLS:C1842371","DOID:0110567","GARD:18121","MEDGEN:330834","MESH:C564272"],"synonyms":[{"name":"DFNA41","type":"narrow"},{"name":"P2RX2 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 41","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 41","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in P2RX2","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 41","type":"narrow"},{"name":"deafness, autosomal dominant 41","type":"narrow"},{"name":"deafness, autosomal dominant type 41","type":"narrow"}],"termid":"MONDO:0011994","xrefs":{"Monarch":{"xref_id":"0011994"}}}


id: PBO:0083445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene ALA1/YOR335C","termid":"PBO:0083445"}


id: MONDO:0012987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal agammaglobulinemia in which the cause of the disease is a mutation in the CD79B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal agammaglobulinemia","termid":"MONDO:0011096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"agammaglobulinemia 6, autosomal recessive","secondary_identifiers":["OMIM:612692","UMLS:C3150207","MEDGEN:461557","GARD:15579","DOID:0081138"],"synonyms":[{"name":"AGM6","type":"related"},{"name":"CD79B autosomal agammaglobulinemia","type":"exact"},{"name":"agammaglobulinemia 6, autosomal recessive","type":"exact"},{"name":"agammaglobulinemia, autosomal recessive, due to Cd79B defect","type":"related"},{"name":"autosomal agammaglobulinemia caused by mutation in CD79B","type":"exact"}],"termid":"MONDO:0012987","xrefs":{"Monarch":{"xref_id":"0012987"}}}


id: GO:0072438
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of DNA replication checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to DNA integrity checkpoint signaling","termid":"GO:0072402"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to DNA replication checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication checkpoint effector process","type":"exact"},{"name":"response to signal involved in DNA replication checkpoint","type":"exact"}],"termid":"GO:0072438","terms_by_termid":{"GO:0072441":null}}


id: GO:0005787
data:
  {"annotated_genes":["SJAG_03261","SJAG_03737","SJAG_01750","SJAG_02867"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62607,66898,69366,75666],"is_not":false,"summary":null,"term":"GO:0005787"}]},"cv_name":"cellular_component","definition":"A protein complex that is located in the endoplasmic reticulum membrane and cleaves the signal sequence from precursor proteins following their transport out of the cytoplasmic space.","definition_xrefs":["GOC:sgd_curators","PMID:7615509","PMID:1846444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"is_a","term_name":"serine-type endopeptidase complex","termid":"GO:1905370"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01750":null,"SJAG_02867":null,"SJAG_03261":null,"SJAG_03737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575","GO:0005783","GO:0005789"],"is_obsolete":false,"name":"signal peptidase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0005787","terms_by_termid":{"GO:0005787":null}}


id: MONDO:0032733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"global developmental delay, progressive ataxia, and elevated glutamine","secondary_identifiers":["OMIM:618412","UMLS:C5193080","MEDGEN:1680160"],"synonyms":[{"name":"GDPAG","type":"related"},{"name":"GLOBAL DEVELOPMENTAL DELAY, PROGRESSIVE ATAXIA, AND ELEVATED GLUTAMINE","type":"related"},{"name":"Glutaminase Deficiency With Impaired Intellectual Development and Progressive Ataxia","type":"related"}],"termid":"MONDO:0032733","xrefs":{"Monarch":{"xref_id":"0032733"}}}


id: PBO:0117085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPARGC1A antisense RNA 1","termid":"PBO:0117085"}


id: GO:0036008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sucrose, which proceeds by phosphorylation of sucrose to form sucrose-6-phosphate. The subsequent actions of a hydrolase and a fructokinase generate fructose-6-phosphate and glucose-6-phosphate.","definition_xrefs":["MetaCyc:SUCUTIL-PWY","GOC:bf","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose catabolic process","termid":"GO:0005987"},{"relation_name":"is_a","term_name":"fructose 6-phosphate metabolic process","termid":"GO:0006002"},{"relation_name":"is_a","term_name":"glucose 6-phosphate metabolic process","termid":"GO:0051156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"sucrose catabolic process to fructose-6-phosphate and glucose-6-phosphate","termid":"GO:0036008"}


id: PR:Q9P376
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA polymerase II subunit A C-terminal domain phosphatase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23081:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit A C-terminal domain phosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.05c","secondary_identifiers":["UniProtKB:Q9P376"],"synonyms":[{"name":"CTD phosphatase fcp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC19B12.05c","type":"related"},{"name":"Spom972h-CTDP1","type":"exact"}],"termid":"PR:Q9P376"}


id: PBO:0018240
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"requires a single stranded telomeric overhang for T-loop formation","termid":"PBO:0018240"}


id: MONDO:0957466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tuberculosis","termid":"MONDO:0018076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary tuberculosis of the digestive system","secondary_identifiers":["MEDGEN:1843420","Orphanet:645859","UMLS:C5816702","icd11.foundation:1873777499"],"termid":"MONDO:0957466","xrefs":{"Monarch":{"xref_id":"0957466"}}}


id: GO:0072221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric distal convoluted tubule over time, from its formation to the mature structure. The metanephric distal convoluted tubule is the first segment of the metanephric nephron lying just downstream from the loop of Henle, immediately after the macula densa. Among other functions, in humans it is responsible for the reabsorption of about 5% of filtered sodium via the thiazide-sensitive Na-Cl symporter.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal convoluted tubule development","termid":"GO:0072025"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"},{"relation_name":"part_of","term_name":"metanephric distal tubule development","termid":"GO:0072235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric distal convoluted tubule development","termid":"GO:0072221"}


id: PR:O13801
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nrp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C17H9.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.04c","synonyms":[{"name":"Spom972h-nrp1","type":"exact"}],"termid":"PR:O13801"}


id: PBO:0059381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 6","termid":"PBO:0059381"}


id: PBO:0073074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan binding protein pseudogene 3","termid":"PBO:0073074"}


id: GO:0140127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H3 dimethylate at arginine 8. The methylation can be symmetrical or asymmetrical.","definition_xrefs":["PMID:24589551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 reader activity","termid":"GO:0140006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140566"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0060090","GO:0030674","GO:0003674","GO:0140566"],"is_obsolete":false,"name":"histone H3R8me2 reader activity","termid":"GO:0140127"}


id: PBO:0084295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Intra-Golgi v-SNARE; required for transport of proteins between an early and a later Golgi compartment","termid":"PBO:0084295"}


id: PBO:0081622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 551","termid":"PBO:0081622"}


id: MONDO:0043139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"visual epilepsy","termid":"MONDO:0001386"},{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"microcephaly sparse hair intellectual disability seizures","secondary_identifiers":["UMLS:C2931530","MEDGEN:444077","MESH:C537545"],"termid":"MONDO:0043139","xrefs":{"Monarch":{"xref_id":"0043139"}}}


id: PBO:0079069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 3-3","termid":"PBO:0079069"}


id: GO:0018655
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxo-delta3-4,5,5-trimethylcyclopentenylacetyl-CoA + NADH + H+ + O2 = NAD+ + H2O + delta2,5-3,4,4-trimethylpimelyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0430"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-oxo-delta3-4,5,5-trimethylcyclopentenylacetyl-CoA 1,2-monooxygenase activity (obsolete GO:0018655)","termid":"GO:0018655"}


id: MONDO:0035876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"belinostat toxicity or dose selection","secondary_identifiers":["Orphanet:574671"],"termid":"MONDO:0035876","xrefs":{"Monarch":{"xref_id":"0035876"}}}


id: GO:0102689
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + N(6)-dimethylallyladenine = H+ + 7-(alpha-D-glucosyl)-N(6)-isopentenyladenine + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:isopentenyladenine 7-N-glucosyltransferase activity (obsolete GO:0102689)","termid":"GO:0102689"}


id: PATO:0002164
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the middle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved medial","termid":"PATO:0002164"}


id: PBO:0047232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 230 member D","termid":"PBO:0047232"}


id: MONDO:1011232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Entropion that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entropion, non-human animal","termid":"MONDO:1010323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"entropion, rabbit","secondary_identifiers":["OMIA:000337-9986"],"termid":"MONDO:1011232","xrefs":{"Monarch":{"xref_id":"1011232"}}}


id: GO:0043966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3 acetylation (obsolete GO:0043966)","termid":"GO:0043966"}


id: PBO:0027484
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_hydrogen_peroxide-induced_proteins_during_G0","termid":"PBO:0027484"}


id: PBO:0058026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3976","termid":"PBO:0058026"}


id: GO:0021741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the spinal trigeminal nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:curators","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trigeminal sensory nucleus development","termid":"GO:0021730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal trigeminal nucleus development","termid":"GO:0021741"}


id: MONDO:0030908
data:
  {"annotated_genes":["SJAG_04176"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87125],"is_not":false,"summary":null,"term":"MONDO:0030908"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04176":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked, syndromic, 35","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080241","MEDGEN:1392054","OMIM:300998","UMLS:C4478383"],"synonyms":[{"name":"MRXS35","type":"related"},{"name":"intellectual developmental disorder, X-linked, syndromic, 35, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, 35","type":"exact"},{"name":"mental retardation, X-linked, syndromic, 35","type":"related"},{"name":"syndromic X-linked intellectual disability 35","type":"related"},{"name":"syndromic X-linked mental retardation 35","type":"related"}],"termid":"MONDO:0030908","terms_by_termid":{"MONDO:0030908":null},"xrefs":{"Monarch":{"xref_id":"0030908"}}}


id: GO:0004109
data:
  {"annotated_genes":["SJAG_04944"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81822],"is_not":false,"summary":null,"term":"GO:0004109"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: coproporphyrinogen III + 2 H+ + O2 = 2 CO2 + 2 H2O + protoporphyrinogen IX.","definition_xrefs":["RHEA:18257","EC:1.3.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","termid":"GO:0016634"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04944":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"coproporphyrinogen oxidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:RXN0-1461","KEGG_REACTION:R03220","Reactome:R-HSA-189421"],"synonyms":[{"name":"coprogen oxidase activity","type":"exact"},{"name":"coproporphyrinogen-III oxidase activity","type":"exact"},{"name":"coproporphyrinogen:oxygen oxidoreductase (decarboxylating)","type":"related"},{"name":"coproporphyrinogenase activity","type":"exact"}],"termid":"GO:0004109","terms_by_termid":{"GO:0004109":null}}


id: FYPO:0002238
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cerulenin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002060","FYPO:0002058","FYPO:0000139","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on cerulenin","synonyms":[{"name":"normal cell population growth in presence of cerulenin","type":"exact"},{"name":"normal cell population growth on cerulenin","type":"exact"},{"name":"normal cellular response to cerulenin","type":"related"},{"name":"normal vegetative cell population growth on cerulenin","type":"exact"}],"termid":"FYPO:0002238"}


id: GO:2000672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of motor neuron apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron apoptotic process","termid":"GO:0043524"},{"relation_name":"is_a","term_name":"regulation of motor neuron apoptotic process","termid":"GO:2000671"},{"relation_name":"negatively_regulates","term_name":"motor neuron apoptotic process","termid":"GO:0097049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of motor neuron apoptotic process","synonyms":[{"name":"negative regulation of motoneuron apoptosis","type":"exact"},{"name":"negative regulation of motor neuron apoptosis","type":"narrow"}],"termid":"GO:2000672"}


id: PBO:0005542
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.7","termid":"PBO:0005542"}


id: PBO:0000506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex beta subunit Cct2","termid":"PBO:0000506"}


id: GO:0006446
data:
  {"annotated_genes":["SJAG_02026","SJAG_03869","SJAG_00786","SJAG_02592","SJAG_01436","SJAG_04383","SJAG_00169","SJAG_02072","SJAG_00892","SJAG_01942","SJAG_01249","SJAG_04873","SJAG_02638","SJAG_00690"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93188,114141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904689"},{"annotations":[71694,101250,117620,96253,111648,77010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"},{"annotations":[102384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"},{"annotations":[74492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045948"},{"annotations":[105895,105262,97127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990611"},{"annotations":[105033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990983"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translational initiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"regulates","term_name":"translational initiation","termid":"GO:0006413"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_00892":null,"SJAG_01249":null,"SJAG_01436":null,"SJAG_01942":null,"SJAG_02026":null,"SJAG_02072":null,"SJAG_02592":null,"SJAG_02638":null,"SJAG_03869":null,"SJAG_04383":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translational initiation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0006446","terms_by_termid":{"GO:0045948":null,"GO:0070134":null,"GO:1904689":null,"GO:1990611":null,"GO:1990625":null,"GO:1990983":null}}


id: PBO:0016918
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement A. nidulans nimA","termid":"PBO:0016918"}


id: FYPO:0009084
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of lithium chloride and methyl methanesulfonate. Cells stop growing (and may die) at concentrations of lithium chloride and methyl methanesulfonate that allow wild type cells to grow.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to lithium chloride and methyl methanesulfonate","synonyms":[{"name":"hypersensitive to lithium chloride and MMS","type":"exact"},{"name":"hypersensitive to lithium chloride and methyl methanesulfonate","type":"exact"},{"name":"sensitive to lithium chloride and MMS","type":"exact"},{"name":"sensitive to lithium chloride and MMS during vegetative growth","type":"exact"},{"name":"sensitive to lithium chloride and MMS in combination","type":"exact"},{"name":"sensitive to lithium chloride and methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"sensitive to lithium chloride and methyl methanesulfonate in combination","type":"exact"}],"termid":"FYPO:0009084"}


id: MONDO:0958097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of superior vena cava","termid":"MONDO:0019829"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary superior vena cava aneurysm","secondary_identifiers":["MEDGEN:1863724","UMLS:C5925121","Orphanet:652668"],"termid":"MONDO:0958097","xrefs":{"Monarch":{"xref_id":"0958097"}}}


id: PBO:0065066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteoglycan 4","termid":"PBO:0065066"}


id: GO:1990596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of an acetyl group from lysine at position 4 of the histone.","definition_xrefs":["PMID:20299449"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K4 deacetylation (obsolete GO:1990596)","termid":"GO:1990596"}


id: GO:0061122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of positive chemotaxis","termid":"GO:0050927"},{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP","termid":"GO:0061118"},{"relation_name":"positively_regulates","term_name":"chemotaxis to cAMP","termid":"GO:0043327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of positive chemotaxis to cAMP","termid":"GO:0061122"}


id: PBO:0064219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C beta 4","termid":"PBO:0064219"}


id: GO:0043812
data:
  {"annotated_genes":["SJAG_00880","SJAG_02706"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75613,79957],"is_not":false,"summary":null,"term":"GO:0043812"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol 4-phosphate) + H2O = a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol) + phosphate.","definition_xrefs":["RHEA:55652","PMID:10224048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate 4-phosphatase activity","termid":"GO:0034596"},{"relation_name":"is_a","term_name":"phosphatidylinositol monophosphate phosphatase activity","termid":"GO:0052744"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_02706":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:RXN-10961"],"synonyms":[{"name":"phosphatidylinositol 4-phosphate phosphatase activity","type":"exact"}],"termid":"GO:0043812","terms_by_termid":{"GO:0043812":null}}


id: FYPO:0005984
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to the dye Congo Red. Cells stop growing (and may die) at a concentration of Congo Red that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to Congo Red","synonyms":[{"name":"hypersensitive to Congo Red","type":"exact"},{"name":"sensitive to Congo Red during mitotic cell cycle","type":"related"},{"name":"sensitive to Congo Red during vegetative growth","type":"exact"}],"termid":"FYPO:0005984"}


id: PBO:0048456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCC2 antisense RNA 1","termid":"PBO:0048456"}


id: GO:0007140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process by which the cell nucleus divides as part of a meiotic cell cycle in the male germline.","definition_xrefs":["GOC:dph","GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic nuclear division","termid":"GO:0140013"},{"relation_name":"part_of","term_name":"male gamete generation","termid":"GO:0048232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"male meiotic nuclear division","synonyms":[{"name":"male meiosis","type":"related"},{"name":"male nuclear division","type":"broad"}],"termid":"GO:0007140"}


id: FYPO:0001148
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing amiloride.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000003","FYPO:0000257","FYPO:0000139","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on amiloride","synonyms":[{"name":"normal cell population growth in presence of amiloride","type":"exact"},{"name":"normal cell population growth on amiloride","type":"exact"},{"name":"normal cellular response to amiloride","type":"related"},{"name":"normal vegetative cell population growth on amiloride","type":"exact"}],"termid":"FYPO:0001148"}


id: GO:0019700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphonates, any organic compound containing one or more C-PO(OH)2 or C-PO(OR)2 (with R=alkyl, aryl) groups. Catabolism of phosphonic acid itself, an inorganic compound without the biochemically relevant C-P bond, is not included.","definition_xrefs":["GOC:js"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"organic phosphonate metabolic process","termid":"GO:0019634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"organic phosphonate catabolic process","synonyms":[{"name":"organophosphonate catabolic process","type":"related"},{"name":"phosphonate breakdown","type":"exact"},{"name":"phosphonate catabolism","type":"exact"},{"name":"phosphonate degradation","type":"exact"}],"termid":"GO:0019700"}


id: GO:0007572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete age dependent decreased translational activity (obsolete GO:0007572)","synonyms":[{"name":"age dependent decreased translational activity","type":"exact"}],"termid":"GO:0007572"}


id: MONDO:0016094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor that involves the vagina.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal cancer","termid":"MONDO:0001402"},{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vaginal germ cell malignant tumor","secondary_identifiers":["MEDGEN:1670250","Orphanet:206489","GARD:20347","UMLS:C4749402"],"synonyms":[{"name":"malignant germ cell tumor of the vagina","type":"related"},{"name":"malignant germ cell tumour of the vagina","type":"related"},{"name":"vagina malignant germ cell tumor","type":"exact"},{"name":"vagina malignant germ cell tumour","type":"exact"},{"name":"vaginal germ cell cancer","type":"exact"}],"termid":"MONDO:0016094","xrefs":{"Monarch":{"xref_id":"0016094"}}}


id: PBO:0039840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 10","termid":"PBO:0039840"}


id: PBO:0078682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 15-1","termid":"PBO:0078682"}


id: MONDO:0017942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hendra virus infection is a rare viral infection disorder caused by the Hendra virus characterized by onset of flu-like symptoms (fever, myalgia, headaches, lethargy) approximately one week after having been in close contact with bodily fluids of infected horses. Neurological manifestations (e.g. vertigo, confusion, ataxia) and progressive respiratory failure, leading to death, have also been reported.","definition_xrefs":["Orphanet:324632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious encephalitis","termid":"MONDO:0020067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hendra virus infection","secondary_identifiers":["UMLS:C4505487","GARD:21448","MEDGEN:1388276"],"synonyms":[{"name":"Hendra henipavirus caused disease or disorder","type":"exact"},{"name":"Hendra henipavirus disease or disorder","type":"exact"},{"name":"Hendra henipavirus infectious disease","type":"exact"}],"termid":"MONDO:0017942","xrefs":{"Monarch":{"xref_id":"0017942"}}}


id: PBO:0059600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 12","termid":"PBO:0059600"}


id: PBO:0087654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the heterohexameric Gim/prefoldin protein complex; involved in the folding of alpha-tubulin, beta-tubulin, and actin; prefoldin complex also localizes to chromatin of actively transcribed genes in the nucleus and facilitates transcriptional elongation","termid":"PBO:0087654"}


id: PATO:0000652
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000652 substance value (obsolete PATO:0000652)","termid":"PATO:0000652"}


id: PBO:0065597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 13","termid":"PBO:0065597"}


id: PBO:0069169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 421, pseudogene","termid":"PBO:0069169"}


id: GO:0061796
data:
  {"annotated_genes":["SJAG_03915","SJAG_04358"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93173,101683],"is_not":false,"summary":null,"term":"GO:0061796"}]},"cv_name":"biological_process","definition":"A mitotic cell cycle process involved in the net addition of membrane at the site of cytokinesis; includes vesicle recruitment and fusion, local lipid synthesis and insertion.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane addition at site of cytokinesis","termid":"GO:0007107"},{"relation_name":"is_a","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03915":null,"SJAG_04358":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0000281","GO:0061024"],"is_obsolete":false,"name":"membrane addition at site of mitotic cytokinesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061796","terms_by_termid":{"GO:0061796":null}}


id: SO:1000140
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A compound chromosome whereby two arms from different chromosomes are connected through the centromere of one of them.","definition_xrefs":["SO:ke","FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound_chromosome","termid":"SO:1000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hetero_compound_chromosome","synonyms":[{"name":"hetero compound chromosome","type":"exact"},{"name":"hetero-compound chromosome","type":"exact"}],"termid":"SO:1000140"}


id: GO:2001020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of response to DNA damage stimulus.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of response to DNA damage stimulus (obsolete GO:2001020)","synonyms":[{"name":"regulation of DNA damage response","type":"exact"},{"name":"regulation of cellular DNA damage response","type":"exact"},{"name":"regulation of cellular response to DNA damage stimulus","type":"exact"},{"name":"regulation of response to genotoxic stress","type":"exact"}],"termid":"GO:2001020"}


id: GO:0019778
data:
  {"annotated_genes":["SJAG_00645"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75189],"is_not":false,"summary":null,"term":"GO:0019778"}]},"cv_name":"molecular_function","definition":"Catalysis of the activation of the small ubiquitin-related modifier APG12, through the formation of an ATP-dependent high-energy thiolester bond.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like modifier activating enzyme activity","termid":"GO:0008641"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00645":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"Atg12 activating enzyme activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"APG12 activating enzyme activity","type":"related"}],"termid":"GO:0019778","terms_by_termid":{"GO:0019778":null}}


id: GO:0052557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the immune response of the symbiont organism; the immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of symbiont immune response (obsolete GO:0052557)","synonyms":[{"name":"positive regulation by organism of symbiont immune response","type":"exact"}],"termid":"GO:0052557"}


id: FYPO:0001734
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which duplicated mitotic spindle pole bodies do not separate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body separation","termid":"FYPO:0001733"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000337","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0000641"],"is_obsolete":false,"name":"abolished mitotic spindle pole body separation","synonyms":[{"name":"abolished spindle pole body separation during mitotic cell cycle","type":"related"},{"name":"clustered mitotic spindle pole bodies","type":"related"},{"name":"mitotic SPB separation abolished","type":"exact"},{"name":"mitotic spindle pole body separation abolished","type":"exact"},{"name":"spindle pole body separation abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001734"}


id: PATO:0000904
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000904 wild abortive value (obsolete PATO:0000904)","termid":"PATO:0000904"}


id: PBO:0087156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA helicase in the DEAH-box family; functions in both RNA polymerase I and polymerase II transcript metabolism; catalyzes removal of U2, U5, and U6 snRNPs from the postsplicing lariat-intron ribonucleoprotein complex; required for efficient biogenesis of both small- and large-subunit rRNAs; acts with Sqs1p to promote 20S to 18S rRNA processing catalyzed by endonuclease Nob1p","termid":"PBO:0087156"}


id: PBO:0045768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ECI2 divergent transcript","termid":"PBO:0045768"}


id: GO:0102940
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phloroglucinol + S-adenosyl-L-methionine = H+ + 3,5-dihydroxyanisole + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete phloroglucinol O-methyltransferase activity (obsolete GO:0102940)","termid":"GO:0102940"}


id: GO:1905434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retrograde trans-synaptic signaling by neuropeptide.","definition_xrefs":["GOC:PARL","GOC:TermGenie","PMID:19448629","GOC:bf","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"is_a","term_name":"positive regulation of signaling","termid":"GO:0023056"},{"relation_name":"is_a","term_name":"regulation of retrograde trans-synaptic signaling by neuropeptide","termid":"GO:1905432"},{"relation_name":"positively_regulates","term_name":"retrograde trans-synaptic signaling by neuropeptide","termid":"GO:0099082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of retrograde trans-synaptic signaling by neuropeptide","synonyms":[{"name":"activation of retrograde trans-synaptic signaling by neuropeptide","type":"narrow"},{"name":"positive regulation of neuropeptide-mediated retrograde trans-synaptic signaling","type":"related"},{"name":"up regulation of retrograde trans-synaptic signaling by neuropeptide","type":"exact"},{"name":"up-regulation of retrograde trans-synaptic signaling by neuropeptide","type":"exact"},{"name":"upregulation of retrograde trans-synaptic signaling by neuropeptide","type":"exact"}],"termid":"GO:1905434"}


id: PBO:0075558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm equatorial segment protein 1","termid":"PBO:0075558"}


id: MONDO:0008068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete navicular bone, accessory (obsolete MONDO:0008068)","secondary_identifiers":["MESH:C536002","OMIM:161600"],"synonyms":[{"name":"navicular bone, accessory","type":"exact"}],"termid":"MONDO:0008068","xrefs":{"Monarch":{"xref_id":"0008068"}}}


id: GO:1900267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of substance P receptor binding.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of substance P receptor binding (obsolete GO:1900267)","synonyms":[{"name":"activation of neurokinin-1 receptor binding","type":"exact"},{"name":"activation of substance P receptor binding","type":"narrow"},{"name":"activation of substance P receptor ligand","type":"narrow"},{"name":"positive regulation of neurokinin-1 receptor binding","type":"exact"},{"name":"positive regulation of substance P receptor ligand","type":"narrow"},{"name":"up regulation of neurokinin-1 receptor binding","type":"exact"},{"name":"up regulation of substance P receptor binding","type":"exact"},{"name":"up regulation of substance P receptor ligand","type":"narrow"},{"name":"up-regulation of neurokinin-1 receptor binding","type":"exact"},{"name":"up-regulation of substance P receptor binding","type":"exact"},{"name":"up-regulation of substance P receptor ligand","type":"narrow"},{"name":"upregulation of neurokinin-1 receptor binding","type":"exact"},{"name":"upregulation of substance P receptor binding","type":"exact"},{"name":"upregulation of substance P receptor ligand","type":"narrow"}],"termid":"GO:1900267"}


id: PBO:0082787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the TOM (translocase of outer membrane) complex; responsible for recognition and initial import steps for all mitochondrially directed proteins; promotes assembly and stability of the TOM complex","termid":"PBO:0082787"}


id: MONDO:0018151
data:
  {"annotated_genes":["SJAG_01866","SJAG_06603","SJAG_01043","SJAG_04000","SJAG_00721","SJAG_04568","SJAG_01865","SJAG_00459","SJAG_00933"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012784"},{"annotations":[88280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011829"},{"annotations":[88130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013838"},{"annotations":[87695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033615"},{"annotations":[88129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013837"},{"annotations":[88127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013840"},{"annotations":[88126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013836"},{"annotations":[87258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014562"},{"annotations":[87723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014754"}]},"cv_name":"mondo","definition":"A genetically heterogeneous condition, typically inherited in an autosomal recessive fashion, characterized by coenzyme Q10 deficiency.","definition_xrefs":["NCIT:C142083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00459":null,"SJAG_00721":null,"SJAG_00933":null,"SJAG_01043":null,"SJAG_01865":null,"SJAG_01866":null,"SJAG_04000":null,"SJAG_04568":null,"SJAG_06603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0005244"],"is_obsolete":false,"name":"coenzyme Q10 deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10423","icd11.foundation:1251664337","DOID:0050730","OMIMPS:607426","Orphanet:35656","SCTID:724575009","UMLS:C1843920","MEDGEN:334528","MESH:C564403"],"synonyms":[{"name":"CoQ10 deficiency","type":"exact"},{"name":"CoQ10 deficiency, primary","type":"related"},{"name":"coenzyme Q10 deficiency disease","type":"exact"},{"name":"coenzyme Q10 deficiency, primary","type":"exact"}],"termid":"MONDO:0018151","terms_by_termid":{"MONDO:0011829":null,"MONDO:0012784":null,"MONDO:0013836":null,"MONDO:0013837":null,"MONDO:0013838":null,"MONDO:0013840":null,"MONDO:0014562":null,"MONDO:0014754":null,"MONDO:0033615":null},"xrefs":{"Monarch":{"xref_id":"0018151"}}}


id: PBO:0061842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-linked N-acetylglucosamine (GlcNAc) transferase","termid":"PBO:0061842"}


id: MONDO:0021042
data:
  {"annotated_genes":["SJAG_01111","SJAG_04213"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89170,89169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"}]},"cv_name":"mondo","definition":"A benign or malignant brain and spinal cord tumor that arises from glial cells (astrocytes, oligodendrocytes, ependymal cells). Tumors that arise from astrocytes are called astrocytic tumors or astrocytomas. Tumors that arise from oligodendrocytes are called oligodendroglial tumors. Tumors that arise from ependymal cells are called ependymomas.","definition_xrefs":["NCIT:C3059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroepithelial neoplasm","termid":"MONDO:0021193"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_04213":null},"genotype_count":0,"is_obsolete":false,"name":"glioma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D005910","Orphanet:182067","MEDGEN:9030","EFO:0005543","UMLS:C0017638","SCTID:393564001","GARD:6513"],"synonyms":[{"name":"glial neoplasm","type":"exact"},{"name":"glial tumor","type":"exact"},{"name":"glial tumour","type":"exact"},{"name":"glioma","type":"exact"},{"name":"neoplasm of neuroglia","type":"exact"},{"name":"neoplasm of the neuroglia","type":"exact"},{"name":"neuroglial neoplasm","type":"exact"},{"name":"neuroglial tumor","type":"exact"},{"name":"neuroglial tumour","type":"exact"},{"name":"tumor of neuroglia","type":"exact"},{"name":"tumor of the neuroglia","type":"exact"},{"name":"tumour of neuroglia","type":"exact"},{"name":"tumour of the neuroglia","type":"exact"}],"termid":"MONDO:0021042","terms_by_termid":{"MONDO:0024517":null},"xrefs":{"Monarch":{"xref_id":"0021042"}}}


id: GO:0070177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of water from a contractile vacuole to the outside of a cell by fusion of the contractile vacuole membrane with the plasma membrane.","definition_xrefs":["GOC:mah","PMID:10369671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulated exocytosis","termid":"GO:0045055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"contractile vacuole discharge","termid":"GO:0070177"}


id: MONDO:0000033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete frontonasal dysplasia (obsolete MONDO:0000033)","termid":"MONDO:0000033","xrefs":{"Monarch":{"xref_id":"0000033"}}}


id: PBO:0079293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTLL10 antisense RNA 1","termid":"PBO:0079293"}


id: FYPO:0002532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of protein localization to nucleoplasm","synonyms":[{"name":"delayed onset of protein localisation to nucleoplasm","type":"exact"},{"name":"delayed onset of protein localization to nucleoplasm during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to nucleoplasm during vegetative growth","type":"exact"},{"name":"delayed protein localization to nucleoplasm","type":"exact"}],"termid":"FYPO:0002532"}


id: PBO:0016097
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POmbe Boi","termid":"PBO:0016097"}


id: GO:0090060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of metaxylem development. Metaxylem development is the process whose specific outcome is the progression of the metaxylem over time, from its formation to the mature structure. The metaxylem is the part of the primary xylem that differentiates after the protoxylem and before the secondary xylem, if any of the latter is formed.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"metaxylem development","termid":"GO:0090058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metaxylem development","termid":"GO:0090060"}


id: PR:Q10318
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dihydroxy-acid dehydratase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxy-acid dehydratase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.06c","secondary_identifiers":["UniProtKB:Q10318"],"synonyms":[{"name":"2,3-dihydroxy acid hydrolyase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DAD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ilvD","type":"exact"}],"termid":"PR:Q10318"}


id: PR:O74731
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA-dihydrouridine synthase 2-like that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11082:SF4","PRO:DNx","OMA:SCHPO02719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-dihydrouridine(20) synthase [NAD(P)+] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.06","secondary_identifiers":["UniProtKB:O74731"],"synonyms":[{"name":"Spom972h-DUS2","type":"exact"},{"name":"tRNA-dihydrouridine synthase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74731"}


id: MONDO:0011266
data:
  {"annotated_genes":["SJAG_02043"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88074],"is_not":false,"summary":null,"term":"MONDO:0011266"}]},"cv_name":"mondo","definition":"Myotonic dystrophy type 2 (MD2), also known as proximal myotonic myopathy, is a very rare genetic multi-system disorder of late childhood or adult-onset characterized by mild myotonia, muscle weakness, and rarely cardiac conduction disorders.","definition_xrefs":["Orphanet:606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotonic dystrophy","termid":"MONDO:0016107"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02043":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myotonic dystrophy type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2931689","DOID:0050759","GARD:9728","NCIT:C122789","SCTID:41574007","NCIT:C84680","ICD9:359.2","icd11.foundation:1005849639","MEDGEN:419137","NCIT:C122790","OMIM:602668"],"synonyms":[{"name":"CNBP myotonic dystrophy","type":"exact"},{"name":"DM2","type":"related"},{"name":"PROMM","type":"related"},{"name":"dystrophia myotonica 2","type":"related"},{"name":"dystrophia myotonica type 2","type":"related"},{"name":"myotonic dystrophy 2","type":"related"},{"name":"myotonic dystrophy caused by mutation in CNBP","type":"exact"},{"name":"myotonic dystrophy type 2","type":"exact"},{"name":"myotonic myopathy, proximal","type":"related"},{"name":"proximal myotonic dystrophy","type":"exact"},{"name":"proximal myotonic myopathy","type":"exact"},{"name":"ricker disease","type":"exact"},{"name":"ricker syndrome","type":"exact"}],"termid":"MONDO:0011266","terms_by_termid":{"MONDO:0011266":null},"xrefs":{"Monarch":{"xref_id":"0011266"}}}


id: PBO:0005175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein Cwf23","termid":"PBO:0005175"}


id: GO:0086045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which AV node cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"},{"relation_name":"part_of","term_name":"AV node cell action potential","termid":"GO:0086016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"membrane depolarization during AV node cell action potential","synonyms":[{"name":"membrane depolarization during AV node cardiac muscle cell action potential","type":"exact"},{"name":"membrane depolarization during atrioventricular node cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086045"}


id: PBO:0059915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 1","termid":"PBO:0059915"}


id: GO:0102751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + a glucosyl-glycogenin = (1,4-alpha-D-glucosyl)n-glucosyl glucogenin + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-alpha-D-glucose:glucosyl-glycogenin alpha-D-glucosyltransferase activity (obsolete GO:0102751)","termid":"GO:0102751"}


id: GO:0008935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-succinylbenzoyl-CoA + H+ = 1,4-dihydroxy-2-naphthoyl-CoA + H2O.","definition_xrefs":["RHEA:26562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1,4-dihydroxy-2-naphthoyl-CoA synthase activity","secondary_identifiers":["EC:4.1.3.36","KEGG_REACTION:R04150","MetaCyc:NAPHTHOATE-SYN-RXN"],"synonyms":[{"name":"DHNA synthetase activity","type":"related"},{"name":"O-succinylbenzoyl-CoA 1,4-dihydroxy-2-naphthoate-lyase (cyclizing) activity","type":"related"},{"name":"dihydroxynaphthoate synthase activity","type":"related"},{"name":"dihydroxynaphthoic acid synthetase activity","type":"related"},{"name":"naphthoate synthase activity","type":"related"}],"termid":"GO:0008935"}


id: MONDO:0020397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Parachute tricuspid valve is a rare congenital heart malformation defined as an insertion of the chordal apparatus into a single papillary muscle or a muscle group, making a pathognomonic 'pear' shape sign in the four-chamber echocardiographic view with the atrium forming the larger base of the pear and the leaflets the apex. Isolated parachute tricuspid valve may be asymptomatic or present with symptoms of tricuspid stenosis (diastolic inspiratory murmur, pulsation of jugular veins, hepatomegaly, edema, epigastric discomfort, right atrial enlargement, right ventricular hypertrophy, electrocardiography abnormalities). It may also be associated with other heart malformations and present with symptoms of the complex of malformations.","definition_xrefs":["Orphanet:99056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital tricuspid malformation","termid":"MONDO:0020289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"parachute tricuspid valve","secondary_identifiers":["GARD:19624","UMLS:C0344755","MEDGEN:576478"],"termid":"MONDO:0020397","xrefs":{"Monarch":{"xref_id":"0020397"}}}


id: PBO:0038772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein T1","termid":"PBO:0038772"}


id: GO:0000435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving galactose that activates or increases the rate of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by galactose","termid":"GO:0000411"},{"relation_name":"is_a","term_name":"regulation of transcription from RNA polymerase II promoter by galactose","termid":"GO:0000431"},{"relation_name":"is_a","term_name":"carbon catabolite activation of transcription from RNA polymerase II promoter","termid":"GO:0000436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"positive regulation of transcription from RNA polymerase II promoter by galactose","synonyms":[{"name":"activation of transcription from RNA polymerase II promoter by galactose","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter by galactose","type":"narrow"},{"name":"up regulation of transcription from RNA polymerase II promoter by galactose","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter by galactose","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter by galactose","type":"exact"}],"termid":"GO:0000435"}


id: GO:0061370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of testosterone, an androgen having 17beta-hydroxy and 3-oxo groups, together with unsaturation at C-4 C-5.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"testosterone biosynthetic process","termid":"GO:0061370"}


id: GO:0002308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a CD8-positive, alpha-beta cytotoxic T cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD8-positive, alpha-beta T cell differentiation","termid":"GO:0043374"},{"relation_name":"is_a","term_name":"cytotoxic T cell differentiation","termid":"GO:0045065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD8-positive, alpha-beta cytotoxic T cell differentiation","synonyms":[{"name":"CD8-positive, alpha-beta cytotoxic T cell development","type":"related"},{"name":"CD8-positive, alpha-beta cytotoxic T lymphocyte differentiation","type":"exact"},{"name":"CD8-positive, alpha-beta cytotoxic T-cell differentiation","type":"exact"},{"name":"CD8-positive, alpha-beta cytotoxic T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002308"}


id: GO:0014049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the controlled release of glutamate.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamate secretion","termid":"GO:0014048"},{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"positively_regulates","term_name":"glutamate secretion","termid":"GO:0014047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of glutamate secretion","synonyms":[{"name":"activation of glutamate secretion","type":"narrow"},{"name":"stimulation of glutamate secretion","type":"narrow"},{"name":"up regulation of glutamate secretion","type":"exact"},{"name":"up-regulation of glutamate secretion","type":"exact"},{"name":"upregulation of glutamate secretion","type":"exact"}],"termid":"GO:0014049"}


id: GO:0035639
data:
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id: MONDO:0005850
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Virus diseases caused by the poxviridae.","definition_xrefs":["MESH:D011213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"milker's nodule","secondary_identifiers":["SCTID:27240009","ICD9:051.9","UMLS:C0026143","DOID:8729","ICD9:051.1","MEDGEN:44449"],"synonyms":[{"name":"Paravaccinia","type":"exact"},{"name":"Pseudocowpox","type":"related"},{"name":"milker nodule","type":"exact"},{"name":"milkers' node","type":"exact"}],"termid":"MONDO:0005850","xrefs":{"Monarch":{"xref_id":"0005850"}}}


id: PBO:0074656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 46","termid":"PBO:0074656"}


id: PBO:0081145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP64 zinc finger protein","termid":"PBO:0081145"}


id: GO:0002121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Aggressive behavior based on competition between males of the same species over access to resources such as females, dominance, status, etc. and characterized by noise, threats, and is often less injurious.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive behavior","termid":"GO:0002118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inter-male aggressive behavior","synonyms":[{"name":"inter-male aggression","type":"exact"}],"termid":"GO:0002121"}


id: PBO:0000953
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.5.5.1","termid":"PBO:0000953"}


id: GO:0030996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the mitotic cell cycle is halted during one of the normal phases (G1, S, G2, M) as a result of deprivation of nitrogen.","definition_xrefs":["GOC:mah","GOC:vw","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic cell cycle arrest in response to nitrogen starvation (obsolete GO:0030996)","synonyms":[{"name":"cell cycle arrest in response to nitrogen starvation","type":"broad"}],"termid":"GO:0030996"}


id: PBO:0059106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORN repeat containing 2","termid":"PBO:0059106"}


id: GO:0019451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown into pyruvate of L-cystine, catalyzed by the enzyme cysteine dioxygenase (EC:1.13.11.20).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process to pyruvate","termid":"GO:0019450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-cysteine catabolic process to pyruvate, using cysteine dioxygenase","secondary_identifiers":["MetaCyc:CYSTEINE-DEG-PWY"],"synonyms":[{"name":"L-cysteine breakdown to pyruvate, using cysteine dioxygenase","type":"exact"},{"name":"L-cysteine degradation to pyruvate, using cysteine dioxygenase","type":"exact"}],"termid":"GO:0019451"}


id: GO:0008787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-allose = ADP + D-allose 6-phosphate.","definition_xrefs":["EC:2.7.1.55"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexokinase activity","termid":"GO:0004396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"D-allose kinase activity","secondary_identifiers":["MetaCyc:ALLOSE-KINASE-RXN","RHEA:14805"],"synonyms":[{"name":"ATP:D-allose 6-phosphotransferase activity","type":"related"},{"name":"D-allokinase activity","type":"related"},{"name":"D-allose-6-kinase activity","type":"related"},{"name":"allokinase (phosphorylating)","type":"related"},{"name":"allokinase activity","type":"related"},{"name":"allose kinase activity","type":"narrow"}],"termid":"GO:0008787"}


id: PR:Q9C0V7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An arylsulfatase B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized sulfatase PB10D8.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB10D8.02c","secondary_identifiers":["UniProtKB:Q9C0V7"],"synonyms":[{"name":"Spom972h-ARSB","type":"exact"}],"termid":"PR:Q9C0V7"}


id: MONDO:0011009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, congenital, with severe central nervous system atrophy and absence of large myelinated fibers","secondary_identifiers":["UMLS:C1832665","OMIM:601170","MESH:C563378","MEDGEN:331338"],"synonyms":[{"name":"muscular dystrophy, congenital, with severe central nervous system atrophy and absence of large myelinated fibers","type":"exact"}],"termid":"MONDO:0011009","xrefs":{"Monarch":{"xref_id":"0011009"}}}


id: PBO:0028045
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_polymerization","termid":"PBO:0028045"}


id: PBO:0082098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"7,8-diamino-pelargonic acid aminotransferase (DAPA); catalyzes the second step in the biotin biosynthesis pathway; BIO3 is in a cluster of 3 genes (BIO3, BIO4, and BIO5) that mediate biotin synthesis; BIO3 and BIO4 were acquired by horizontal gene transfer (HGT) from bacteria","termid":"PBO:0082098"}


id: PR:O60164
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pescadillo that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03820","PANTHER:PTHR12221:SF6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pescadillo homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F5.05c","secondary_identifiers":["UniProtKB:O60164"],"synonyms":[{"name":"Spom972h-PES1","type":"exact"},{"name":"nucleolar protein 7 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60164"}


id: GO:0015011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an enzyme cofactor consisting of a tetrapyrrole structure containing nickel, such as the F-430 cofactor found in methyl-coenzyme M reductase.","definition_xrefs":["GOC:mah","Wikipedia:Cofactor_F430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"nickel-tetrapyrrole coenzyme metabolic process","synonyms":[{"name":"coenzyme F430 metabolic process","type":"narrow"},{"name":"nickel-tetrapyrrole coenzyme metabolism","type":"exact"}],"termid":"GO:0015011"}


id: GO:0030775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + glucuronoxylan D-glucuronate = S-adenosyl-L-homocysteine + glucuronoxylan 4-O-methyl-D-glucuronate.","definition_xrefs":["EC:2.1.1.112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"glucuronoxylan 4-O-methyltransferase activity","secondary_identifiers":["MetaCyc:GLUCURONOXYLAN-4-O-METHYLTRANSFERASE-RXN","RHEA:20413"],"synonyms":[{"name":"S-adenosyl-L-methionine:glucuronoxylan-D-glucuronate 4-O-methyltransferase activity","type":"related"}],"termid":"GO:0030775"}


id: PBO:0003503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6,7-dimethyl-8-ribityllumazine synthase (predicted)","termid":"PBO:0003503"}


id: PBO:0044226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cubilin","termid":"PBO:0044226"}


id: PBO:0076865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEX13 family member C","termid":"PBO:0076865"}


id: PBO:0024839
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SUV3","termid":"PBO:0024839"}


id: PBO:0050387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 11","termid":"PBO:0050387"}


id: PBO:0013765
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vps38 was previously annotated as atg14","termid":"PBO:0013765"}


id: PBO:0013838
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PhosphoPantothenate-Cysteine","termid":"PBO:0013838"}


id: PBO:0052472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kruppel like factor 17 pseudogene 1","termid":"PBO:0052472"}


id: GO:1904611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 3,3',4,4',5-pentachlorobiphenyl stimulus.","definition_xrefs":["PMID:23196670","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to 3,3',4,4',5-pentachlorobiphenyl","termid":"GO:1904610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 3,3',4,4',5-pentachlorobiphenyl","synonyms":[{"name":"cellular response to PCB 126","type":"exact"}],"termid":"GO:1904611"}


id: GO:0035662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Toll-like 4 protein, a pattern recognition receptor that binds bacterial lipopolysaccharide (LPS) to initiate an innate immune response.","definition_xrefs":["GOC:BHF","PMID:18304834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Toll-like receptor binding","termid":"GO:0035325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"Toll-like receptor 4 binding","synonyms":[{"name":"TLR4 binding","type":"exact"}],"termid":"GO:0035662"}


id: MONDO:0060745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with or without epilepsy or cerebellar ataxia","secondary_identifiers":["MEDGEN:1648354","UMLS:C4748041","OMIM:618060"],"synonyms":[{"name":"IDDECA","type":"related"},{"name":"intellectual developmental disorder with or without epilepsy or cerebellar ataxia","type":"exact"}],"termid":"MONDO:0060745","xrefs":{"Monarch":{"xref_id":"0060745"}}}


id: PBO:0029704
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_polymyxin_B","termid":"PBO:0029704"}


id: PBO:0005388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper binding protein of the mitchondrial inner membrane Cmc2 (predicted)","termid":"PBO:0005388"}


id: PBO:0081198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger imprinted 3","termid":"PBO:0081198"}


id: PBO:0038937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase 5 (class III), chi polypeptide","termid":"PBO:0038937"}


id: GO:0050615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 17-O-acetylnorajmaline + NADP+ = 1,2-dihydrovomilenine + H+ + NADPH.","definition_xrefs":["EC:1.3.1.73","RHEA:12320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"1,2-dihydrovomilenine reductase activity","secondary_identifiers":["MetaCyc:1.3.1.73-RXN","KEGG_REACTION:R05879"],"synonyms":[{"name":"17-O-acetylnorajmaline:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050615"}


id: GO:0050768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neurogenesis, the generation of cells within the nervous system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of neurogenesis","termid":"GO:0050767"},{"relation_name":"is_a","term_name":"negative regulation of nervous system development","termid":"GO:0051961"},{"relation_name":"negatively_regulates","term_name":"neurogenesis","termid":"GO:0022008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neurogenesis","synonyms":[{"name":"down regulation of neurogenesis","type":"exact"},{"name":"down-regulation of neurogenesis","type":"exact"},{"name":"downregulation of neurogenesis","type":"exact"},{"name":"inhibition of neurogenesis","type":"narrow"}],"termid":"GO:0050768"}


id: PBO:0075935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST20-MTHFS readthrough","termid":"PBO:0075935"}


id: GO:0071097
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to paxillin and the FAK-related kinase Pyk2.","definition_xrefs":["PMID:11683411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alphaV-beta3 integrin-paxillin-Pyk2 complex","synonyms":[{"name":"ITGAV-ITGB3-PXN-PTK2b complex","type":"narrow"}],"termid":"GO:0071097"}


id: MONDO:0012602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the RDX gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 24","secondary_identifiers":["GARD:22626","MESH:C567027","DOID:0110482","OMIM:611022","UMLS:C1970239","MEDGEN:370208"],"synonyms":[{"name":"DFNB24","type":"narrow"},{"name":"RDX autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 24","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 24","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in RDX","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 24","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 24","type":"exact"},{"name":"deafness, autosomal recessive 24","type":"narrow"},{"name":"deafness, autosomal recessive type 24","type":"narrow"}],"termid":"MONDO:0012602","xrefs":{"Monarch":{"xref_id":"0012602"}}}


id: PBO:0090161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP I,II and III complex subunit Trs20","termid":"PBO:0090161"}


id: PBO:0011426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no apparent S. cerevisiae ortholog","termid":"PBO:0011426"}


id: PBO:0050779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 1D","termid":"PBO:0050779"}


id: GO:0036302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the atrioventricular canal over time, from its formation to the mature structure. The atrioventricular canal is the part of the heart connecting the atrium to the cardiac ventricle.","definition_xrefs":["UBERON:0002087","ZFA:0001315","PMID:14701881","GOC:BHF","GOC:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular canal development","termid":"GO:0036302"}


id: PBO:0060859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA-related kinase 4 pseudogene 1","termid":"PBO:0060859"}


id: PBO:0068950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 194, pseudogene","termid":"PBO:0068950"}


id: PBO:0108623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO conjugating enzyme E2 Hus5/Ubc9","termid":"PBO:0108623"}


id: PBO:0065211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripherin","termid":"PBO:0065211"}


id: PBO:0016574
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiotic Coiled coil Protein","termid":"PBO:0016574"}


id: PBO:0017495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyketide cyclase SnoaL-like domain protein","termid":"PBO:0017495"}


id: MONDO:0850094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"nonsyndromic genetic hearing loss","termid":"MONDO:0019497"},{"relation_name":"is_a","term_name":"hearing loss disorder","termid":"MONDO:0005365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drug-induced hearing loss","secondary_identifiers":["DOID:0070310"],"termid":"MONDO:0850094","xrefs":{"Monarch":{"xref_id":"0850094"}}}


id: MONDO:0012913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sub-phenotype of WAGR that includes obesity, and is associated with mutation(s) in the BDNF gene.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"WAGR syndrome","termid":"MONDO:0008681"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wilms tumor, aniridia, genitourinary anomalies, intellectual disability, and obesity syndrome","secondary_identifiers":["OMIM:612469","UMLS:C2675904","GARD:15559","MEDGEN:382718","MESH:C567292","NCIT:C122804"],"synonyms":[{"name":"WAGR syndrome with obesity","type":"related"},{"name":"WAGRO","type":"related"},{"name":"Wagro syndrome","type":"related"},{"name":"Wilms tumor, aniridia, genitourinary anomalies, intellectual disability, and obesity syndrome","type":"exact"},{"name":"Wilms tumor, aniridia, genitourinary anomalies, mental retardation, and obesity syndrome","type":"exact"},{"name":"Wilms tumor-aniridia-genitourinary anomalies-intellectual disability-obesity syndrome","type":"exact"},{"name":"Wilms tumor-aniridia-genitourinary anomalies-mental retardation-obesity syndrome","type":"exact"},{"name":"chromosome 11P13-p12 deletion syndrome","type":"related"}],"termid":"MONDO:0012913","xrefs":{"Monarch":{"xref_id":"0012913"}}}


id: FYPO:0001788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to all or part of the cytoplasm is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to cytoplasm","synonyms":[{"name":"normal protein localisation to cytoplasm","type":"exact"},{"name":"normal protein localization to cytoplasm during mitotic cell cycle","type":"related"},{"name":"normal protein localization to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0001788"}


id: PBO:0082755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the septin ring that is required for cytokinesis; present at the ends of rod-like septin hetero-oligomers; C-terminal extension is important for recruitment of Bni5p to the mother-bud neck, which in turn is required for Myo1p recruitment and cytokinesis; septin rings at the mother-bud neck act as scaffolds for recruiting cell division factors and as barriers to prevent diffusion of specific proteins between mother and daughter cells","termid":"PBO:0082755"}


id: GO:1902674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any ciliary basal body that is part of a right posteriolateral flagellum found in Giardia species (trophozoite stage).","definition_xrefs":["PMID:16607022","GO_REF:0000064","PMID:5961344","GOC:giardia","ISBN:9780124260207","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary basal body","termid":"GO:0036064"},{"relation_name":"part_of","term_name":"right posteriolateral flagellum","termid":"GO:0097557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"right posteriolateral basal body","synonyms":[{"name":"cilial basal body of right posteriolateral cilium","type":"exact"},{"name":"cilial basal body of right posteriolateral flagellum","type":"exact"},{"name":"cilial basal body of right posterolateral cilium","type":"exact"},{"name":"cilial basal body of right posterolateral flagellum","type":"exact"},{"name":"ciliary basal body of right posteriolateral cilium","type":"exact"},{"name":"ciliary basal body of right posteriolateral flagellum","type":"exact"},{"name":"ciliary basal body of right posterolateral cilium","type":"exact"},{"name":"ciliary basal body of right posterolateral flagellum","type":"exact"},{"name":"cilium basal body of right posteriolateral cilium","type":"exact"},{"name":"cilium basal body of right posteriolateral flagellum","type":"exact"},{"name":"cilium basal body of right posterolateral cilium","type":"exact"},{"name":"cilium basal body of right posterolateral flagellum","type":"exact"},{"name":"microtubule basal body of right posteriolateral cilium","type":"exact"},{"name":"microtubule basal body of right posteriolateral flagellum","type":"exact"},{"name":"microtubule basal body of right posterolateral cilium","type":"exact"},{"name":"microtubule basal body of right posterolateral flagellum","type":"exact"},{"name":"right posteriolateral flagellum ciliary basal body","type":"exact"}],"termid":"GO:1902674"}


id: PBO:0049216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP1 associated protein 1","termid":"PBO:0049216"}


id: PBO:0075408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm acrosome associated 5B","termid":"PBO:0075408"}


id: MONDO:0003063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hydranencephaly (obsolete MONDO:0003063)","termid":"MONDO:0003063","xrefs":{"Monarch":{"xref_id":"0003063"}}}


id: GO:0009114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of hypoxanthine, 6-hydroxy purine, an intermediate in the degradation of adenylate. Its ribonucleoside is known as inosine and its ribonucleotide as inosinate.","definition_xrefs":["PMID:3196295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase catabolic process","termid":"GO:0006145"},{"relation_name":"is_a","term_name":"hypoxanthine metabolic process","termid":"GO:0046100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"hypoxanthine catabolic process","secondary_identifiers":["GO:0006150"],"synonyms":[{"name":"hypoxanthine breakdown","type":"exact"},{"name":"hypoxanthine catabolism","type":"exact"},{"name":"hypoxanthine degradation","type":"exact"},{"name":"hypoxanthine oxidation","type":"narrow"}],"termid":"GO:0009114"}


id: GO:0015546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of sulfathiazole from one side of a membrane to the other. Sulfathiazole is an antibacterial agent of the sulfonamide group.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"sulfathiazole transmembrane transporter activity","synonyms":[{"name":"bicyclomycin/sulfathiazole:hydrogen antiporter activity","type":"related"},{"name":"sulphathiazole transporter activity","type":"exact"}],"termid":"GO:0015546"}


id: MOD:01340
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["PubMed:11085420","Unimod:91#K","PubMed:11821862","PubMed:11078590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ESP-Tag heavy d10","termid":"MOD:00469"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESP-Tag heavy d10 - site K","synonyms":[{"name":"ESP-Tag heavy d10","type":"related"},{"name":"ESP:2H(10)","type":"related"}],"termid":"MOD:01340"}


id: MONDO:0859223
data:
  {"annotated_genes":["SJAG_04127"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88947],"is_not":false,"summary":null,"term":"MONDO:0859223"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04127":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"congenital disorder of glycosylation, type Iw, autosomal dominant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619714","UMLS:C5562068","MEDGEN:1794278"],"termid":"MONDO:0859223","terms_by_termid":{"MONDO:0859223":null},"xrefs":{"Monarch":{"xref_id":"0859223"}}}


id: MONDO:0013982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant hypohidrotic ectodermal dysplasia","termid":"MONDO:0015884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia 11A, hypohidrotic/hair/tooth type, autosomal dominant","secondary_identifiers":["UMLS:C3541517","GARD:18592","MEDGEN:762105","OMIM:614940","DOID:0111653"],"synonyms":[{"name":"ECTD11A","type":"related"},{"name":"ectodermal dysplasia 11A, hypohidrotic/hair/tooth type, autosomal dominant","type":"exact"},{"name":"ectodermal dysplasia, hypohidrotic, autosomal dominant","type":"related"}],"termid":"MONDO:0013982","xrefs":{"Monarch":{"xref_id":"0013982"}}}


id: MONDO:0022732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chorea minor (obsolete MONDO:0022732)","termid":"MONDO:0022732","xrefs":{"Monarch":{"xref_id":"0022732"}}}


id: MONDO:0007464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Isolated distichiasis is a rare congenital eyelid anomaly characterized by an accessory row of eyelashes (that may be partial or complete) posterior to the normal row of cilia, at or close to the meibomian gland orifices, that is not associated with any other condition, and that may lead to ocular irritation and corneal damage if left untreated.","definition_xrefs":["Orphanet:99177"],"gene_count":0,"genotype_count":0,"name":"obsolete isolated distichiasis (obsolete MONDO:0007464)","secondary_identifiers":["ICD9:743.63","OMIM:126300","SCTID:95339000"],"synonyms":[{"name":"distichiasis","type":"related"},{"name":"eyelashes, two rows of","type":"related"}],"termid":"MONDO:0007464","xrefs":{"Monarch":{"xref_id":"0007464"}}}


id: GO:0047246
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: luteolin 7-O-beta-D-glucosiduronate + UDP-alpha-D-glucuronate = H+ + luteolin 7-O-[(beta-D-glucosiduronate)-(1->2)-(beta-D-glucosiduronate)] + UDP.","definition_xrefs":["RHEA:14149","EC:2.4.1.190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"luteolin-7-O-glucuronide 7-O-glucuronosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R06827","MetaCyc:2.4.1.190-RXN"],"synonyms":[{"name":"LMT activity","type":"related"},{"name":"UDP-glucuronate:luteolin 7-O-glucuronide-glucuronosyltransferase activity","type":"related"},{"name":"UDP-glucuronate:luteolin-7-O-beta-D-glucuronide 2''-O-glucuronosyltransferase activity","type":"related"},{"name":"luteolin-7-O-glucuronide 2''-O-glucuronosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucuronate-luteolin 7-O-glucuronide glucuronosyltransferase activity","type":"related"}],"termid":"GO:0047246"}


id: PBO:0028868
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_snoRNA_level","termid":"PBO:0028868"}


id: PR:O59677
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsm23 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S23, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.15c","synonyms":[{"name":"Spom972h-rsm23","type":"exact"}],"termid":"PR:O59677"}


id: PR:O94579
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit alpha type-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04818","PANTHER:PTHR11599:SF16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.06","secondary_identifiers":["UniProtKB:O94579"],"synonyms":[{"name":"Spom972h-PSMA2","type":"exact"}],"termid":"PR:O94579"}


id: GO:1901494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cysteine metabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"regulation of sulfur amino acid metabolic process","termid":"GO:0031335"},{"relation_name":"regulates","term_name":"cysteine metabolic process","termid":"GO:0006534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790","GO:0006520"],"is_obsolete":false,"name":"regulation of cysteine metabolic process","synonyms":[{"name":"regulation of cysteine metabolism","type":"exact"}],"termid":"GO:1901494"}


id: MONDO:0054697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 11b with atopic dermatitis","secondary_identifiers":["MEDGEN:1627819","NCIT:C176630","OMIM:617638","DOID:0111958","UMLS:C4539957"],"synonyms":[{"name":"IMD11B","type":"related"},{"name":"atopic dermatitis, elevated IgE, and eosinophilia","type":"related"},{"name":"immunodeficiency 11B with ATOPIC dermatitis","type":"related"}],"termid":"MONDO:0054697","xrefs":{"Monarch":{"xref_id":"0054697"}}}


id: MONDO:0017902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic variant of Mendelian susceptibility to mycobacterial diseases characterized by a partial deficiency in IFN-gammaR2, leading to a residual response to IFN-gamma and consequently to recurrent, moderately severe infections with bacillus Calmette-Guerin (BCG) and other environmental mycobacteria (EM).","definition_xrefs":["Orphanet:319574"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"immunodeficiency 28","termid":"MONDO:0013953"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive Mendelian susceptibility to mycobacterial diseases due to partial IFNgammaR2 deficiency","secondary_identifiers":["MEDGEN:1387677","UMLS:C4511098"],"synonyms":[{"name":"IFNGR2 autosomal recessive mendelian susceptibility to mycobacterial diseases due to a partial deficiency","type":"exact"},{"name":"autosomal recessive MSMD due to partial IFNgammaR2 deficiency","type":"exact"},{"name":"autosomal recessive MSMD due to partial interferon gamma receptor 2 deficiency","type":"exact"},{"name":"autosomal recessive mendelian susceptibility to mycobacterial diseases due to a partial deficiency caused by mutation in IFNGR2","type":"exact"},{"name":"autosomal recessive mendelian susceptibility to mycobacterial diseases due to partial interferon gamma receptor 2 deficiency","type":"exact"}],"termid":"MONDO:0017902","xrefs":{"Monarch":{"xref_id":"0017902"}}}


id: PBO:0038462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 2","termid":"PBO:0038462"}


id: GO:0001927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of various polypeptides into the exocyst complex.","definition_xrefs":["GOC:hjd","PMID:9700152","Wikipedia:Exocyst"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"vesicle docking involved in exocytosis","termid":"GO:0006904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0140056"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0140056","GO:0016192","GO:0006810","GO:0044085"],"is_obsolete":false,"name":"exocyst assembly","termid":"GO:0001927"}


id: GO:0061053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a somite from its initial formation to the mature structure. Somites are mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"embryo development","termid":"GO:0009790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somite development","termid":"GO:0061053"}


id: PBO:0044994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIAPH1 antisense RNA 1","termid":"PBO:0044994"}


id: GO:0062078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a TSC1-TSC2 complex.","definition_xrefs":["PMID:28561066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"TSC1-TSC2 complex binding","synonyms":[{"name":"tuberin sclerosis complex binding","type":"exact"},{"name":"tuberin-hamartin complex binding","type":"exact"}],"termid":"GO:0062078"}


id: PBO:0090169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface protein involved in ascospore wall assembly, GPI anchored Meu10","termid":"PBO:0090169"}


id: PBO:0048756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylate reductase 1 homolog","termid":"PBO:0048756"}


id: GO:0018630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-hydroxytoluene + NADH + O2 = NAD+ + OH- + 3-hydroxybenzyl alcohol.","definition_xrefs":["UM-BBD_reactionID:r0081"],"gene_count":0,"genotype_count":0,"name":"obsolete 3,5-xylenol methylhydroxylase activity (obsolete GO:0018630)","termid":"GO:0018630"}


id: GO:0047259
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glucomannan(n) + GDP-mannose = glucomannan(n+1) + GDP.","definition_xrefs":["EC:2.4.1.32","MetaCyc:2.4.1.32-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-1,4-mannosyltransferase activity","termid":"GO:0019187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"glucomannan 4-beta-mannosyltransferase activity","synonyms":[{"name":"GDP-man-beta-mannan mannosyltransferase activity","type":"related"},{"name":"GDP-mannose:glucomannan 1,4-beta-D-mannosyltransferase activity","type":"exact"},{"name":"glucomannan 4-b-mannosyltransferase activity","type":"exact"},{"name":"glucomannan-synthase activity","type":"exact"}],"termid":"GO:0047259"}


id: GO:2000499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of induction of apoptosis in response to chemical stimulus.","definition_xrefs":["GOC:mtg_apoptosis","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of induction of apoptosis in response to chemical stimulus (obsolete GO:2000499)","synonyms":[{"name":"negative regulation of induction of apoptosis in response to chemical stimulus","type":"exact"},{"name":"negative regulation of induction of apoptosis in response to chemical substance","type":"exact"}],"termid":"GO:2000499"}


id: SOFP:sp_status
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sp_status","termid":"SOFP:sp_status"}


id: GO:0016720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (9Z,12Z)-octadecadienoyl-containing glycerolipid + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = a (9Z)-octadec-9-en-12-ynoyl-containing glycerolipid + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["RHEA:46552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"acyl-lipid Delta(12)-acetylenase","secondary_identifiers":["KEGG_REACTION:R05740","EC:1.14.19.39","MetaCyc:1.14.99.33-RXN"],"synonyms":[{"name":"D12-fatty acid dehydrogenase activity","type":"exact"},{"name":"Delta12 fatty acid acetylenase","type":"exact"},{"name":"delta12-fatty acid dehydrogenase activity","type":"related"},{"name":"linoleate delta-12-fatty acid acetylenase (desaturase) activity","type":"exact"}],"termid":"GO:0016720"}


id: PBO:0061592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrophic receptor tyrosine kinase 3","termid":"PBO:0061592"}


id: PBO:0076374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGF-beta activated kinase 1 (MAP3K7) binding protein 2","termid":"PBO:0076374"}


id: MONDO:1012427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy (limb-girdle), non-human animal","termid":"MONDO:1011803"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (limb-girdle), domestic cat","secondary_identifiers":["OMIA:001621-9685"],"termid":"MONDO:1012427","xrefs":{"Monarch":{"xref_id":"1012427"}}}


id: GO:0035964
data:
  {"annotated_genes":["SJAG_03268","SJAG_04391"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73019,119754],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048205"}]},"cv_name":"biological_process","definition":"The evagination of a Golgi membrane, resulting in formation of a COPI-coated vesicle.","definition_xrefs":["PMID:10052452","PMID:17041781","GOC:br"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle budding from membrane","termid":"GO:0006900"},{"relation_name":"part_of","term_name":"vesicle targeting, to, from or within Golgi","termid":"GO:0048199"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03268":null,"SJAG_04391":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"COPI-coated vesicle budding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"COPI vesicle budding","type":"exact"}],"termid":"GO:0035964","terms_by_termid":{"GO:0048205":null}}


id: PBO:0039605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic nuclear phosphoprotein 32 family member E","termid":"PBO:0039605"}


id: GO:1990630
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of IRE1 (Inositol-requiring enzyme-1), RACK1 (Receptor of activated protein kinase C 1, GNB2L1) and PP2A (protein phosphatase 2A). RACK1 acts as an adaptor to bridge an interaction between IRE1 and PP2A.","definition_xrefs":["PMID:20103773","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"IRE1-RACK1-PP2A complex","synonyms":[{"name":"ERN1-RACK1-PP2A complex","type":"related"},{"name":"IRE1alpha-RACK1-PP2A complex","type":"narrow"}],"termid":"GO:1990630"}


id: GO:0033810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: malonyl-CoA + pelargonidin 3-O-(6-caffeoyl-beta-D-glucoside) 5-O-beta-D-glucoside = CoA + 4'''-demalonylsalvianin.","definition_xrefs":["EC:2.3.1.172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"anthocyanin 5-O-glucoside 6'''-O-malonyltransferase activity","secondary_identifiers":["RHEA:21988","MetaCyc:2.3.1.172-RXN"],"synonyms":[{"name":"Ss5MaT1","type":"related"},{"name":"malonyl-CoA:pelargonidin-3-O-(6-caffeoyl-beta-D-glucoside)-5-O-beta-D-glucoside 6'''-O-malonyltransferase activity","type":"related"}],"termid":"GO:0033810"}


id: GO:0050448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-cyclopiazonate + A = alpha-cyclopiazonate + AH(2).","definition_xrefs":["RHEA:14525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond","termid":"GO:0046992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"beta-cyclopiazonate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R04080","MetaCyc:BETA-CYCLOPIAZONATE-DEHYDROGENASE-RXN","EC:1.21.99.1"],"synonyms":[{"name":"b-cyclopiazonate dehydrogenase activity","type":"exact"},{"name":"beta-cyclopiazonate oxidocyclase activity","type":"related"},{"name":"beta-cyclopiazonate:(acceptor) oxidoreductase (cyclizing)","type":"related"},{"name":"beta-cyclopiazonate:acceptor oxidoreductase (cyclizing)","type":"related"},{"name":"beta-cyclopiazonic oxidocyclase activity","type":"related"}],"termid":"GO:0050448"}


id: GO:1900562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dehydroaustinol.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"dehydroaustinol metabolic process","termid":"GO:1900561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"dehydroaustinol catabolic process","synonyms":[{"name":"dehydroaustinol breakdown","type":"exact"},{"name":"dehydroaustinol catabolism","type":"exact"},{"name":"dehydroaustinol degradation","type":"exact"}],"termid":"GO:1900562"}


id: GO:0106174
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a phagolysosome.","definition_xrefs":["GOC:pde","PMID:29471269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"is_a","term_name":"phagocytic vesicle lumen","termid":"GO:0097013"},{"relation_name":"part_of","term_name":"phagolysosome","termid":"GO:0032010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005773","GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"phagolysosome vesicle lumen","termid":"GO:0106174"}


id: PR:Q9UTD4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prefoldin subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00196","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.05","secondary_identifiers":["UniProtKB:Q9UTD4"],"synonyms":[{"name":"Spom972h-PFDN4","type":"exact"}],"termid":"PR:Q9UTD4"}


id: PBO:0042322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD44 molecule (Indian blood group)","termid":"PBO:0042322"}


id: MONDO:1010733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Systemic lupus erythematosus that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"systemic lupus erythematosus, non-human animal","termid":"MONDO:1010118"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus, dog","secondary_identifiers":["OMIA:000968-9615"],"termid":"MONDO:1010733","xrefs":{"Monarch":{"xref_id":"1010733"}}}


id: PBO:0070838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 17","termid":"PBO:0070838"}


id: PBO:0059333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S6 pseudogene 2","termid":"PBO:0059333"}


id: PBO:0046183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor for RNA polymerase II 2 pseudogene 4","termid":"PBO:0046183"}


id: MONDO:0009231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"acromesomelic dysplasia","termid":"MONDO:0019696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005497"],"is_obsolete":false,"name":"acromesomelic dysplasia 2B","secondary_identifiers":["MEDGEN:346432","DOID:0050790","UMLS:C1856738","GARD:9879","MESH:C537931","OMIM:228900","SCTID:715474004","Orphanet:2639"],"synonyms":[{"name":"Du Pan syndrome","type":"exact"},{"name":"acromesomelic dysplasia 2B","type":"exact"},{"name":"fibular aplasia-complex brachydactyly syndrome","type":"related"},{"name":"fibular hypoplasia and complex brachydactyly","type":"exact"}],"termid":"MONDO:0009231","xrefs":{"Monarch":{"xref_id":"0009231"}}}


id: MOD:00844
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes atoms of particular common isotopes with atoms of or groups containing (18)O.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope labeled residue","termid":"MOD:00702"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O labeled residue","termid":"MOD:00844"}


id: GO:0085022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type VI secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host morphology or physiology via protein secreted by type VI secretion system (obsolete GO:0085022)","termid":"GO:0085022"}


id: PBO:0085794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; component of the SWR1 complex, which exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A; required for formation of nuclear-associated array of smooth endoplasmic reticulum known as karmellae","termid":"PBO:0085794"}


id: PBO:0061633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 15 pseudogene 1","termid":"PBO:0061633"}


id: PBO:0004083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Slu7","termid":"PBO:0004083"}


id: GO:1905284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epidermal growth factor receptor signaling pathway involved in heart process.","definition_xrefs":["PMID:23069713","GOC:BHF_miRNA","GO_REF:0000058","GOC:bc","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epidermal growth factor receptor signaling pathway","termid":"GO:0045742"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of epidermal growth factor receptor signaling pathway involved in heart process","termid":"GO:1905282"},{"relation_name":"positively_regulates","term_name":"epidermal growth factor receptor signaling pathway involved in heart process","termid":"GO:1905251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of epidermal growth factor receptor signaling pathway involved in heart process","synonyms":[{"name":"activation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"activation of EGF receptor signaling pathway involved in heart process","type":"narrow"},{"name":"activation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"activation of EGF receptor signalling pathway involved in heart process","type":"narrow"},{"name":"activation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"activation of EGFR signaling pathway involved in heart process","type":"narrow"},{"name":"activation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"activation of ERBB1 signaling pathway involved in heart process","type":"narrow"},{"name":"activation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"activation of epidermal growth factor receptor signaling pathway involved in heart process","type":"narrow"},{"name":"activation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"activation of epidermal growth factor receptor signalling pathway involved in heart process","type":"narrow"},{"name":"activation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"activation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"narrow"},{"name":"positive regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"positive regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"positive regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"positive regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"positive regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"positive regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"positive regulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"positive regulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"positive regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"positive regulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"positive regulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"positive regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"positive regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"},{"name":"up regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"up regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"up regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"up regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"up regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"up regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"up regulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"up regulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"up regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"up regulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"up regulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"up regulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"up regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"up regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"},{"name":"up-regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"up-regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"up-regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"up-regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"up-regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"up-regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"up-regulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"up-regulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"up-regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"up-regulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"up-regulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"up-regulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"up-regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"up-regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"},{"name":"upregulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"upregulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"upregulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"upregulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"upregulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"upregulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"upregulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"upregulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"upregulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"upregulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"upregulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"upregulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"upregulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"upregulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"}],"termid":"GO:1905284"}


id: PBO:0036546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved eukaryotic protein, human C6orf136 ortholog","termid":"PBO:0036546"}


id: PBO:0014231
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transports_or_maintains_localization_of","termid":"PBO:0014231"}


id: FYPO:0000510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which karyogamy involved in conjugation with cellular fusion is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"},{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000301","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nuclear fusion during mating","synonyms":[{"name":"abnormal karyogamy","type":"exact"},{"name":"abnormal karyogamy involved in conjugation with cellular fusion","type":"exact"},{"name":"abnormal nuclear fusion during conjugation","type":"exact"},{"name":"nuclear fusion during mating: abnormal","type":"related"}],"termid":"FYPO:0000510"}


id: PBO:0088005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type 2C protein phosphatase (PP2C); dephosphorylates Hog1p (see also Ptc2p) to limit maximal kinase activity induced by osmotic stress; dephosphorylates T169 phosphorylated Cdc28p (see also Ptc2p); role in DNA damage checkpoint inactivation; PTC3 has a paralog, PTC2, that arose from the whole genome duplication","termid":"PBO:0088005"}


id: GO:0003021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about the levels of carbon dioxide are received and are converted to a molecular signal by chemoreceptors in the carotid bodies and the aortic bodies.","definition_xrefs":["ISBN:0323031951","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of carbon dioxide","termid":"GO:0003031"},{"relation_name":"part_of","term_name":"detection of hypoxic conditions in blood by chemoreceptor signaling","termid":"GO:0002007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of increased carbon dioxide by chemoreceptor signaling","synonyms":[{"name":"detection of increased carbon dioxide by chemoreceptor signalling","type":"exact"}],"termid":"GO:0003021"}


id: PATO:0000530
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000530 soil nutrient sensitivity value (obsolete PATO:0000530)","termid":"PATO:0000530"}


id: GO:0090647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the processes that arise as an organism progresses toward the end of its lifespan that results in a decline in behavioral activities such as locomotory behavior, and learning or memory.","definition_xrefs":["GOC:cjm","GOC:kmv","PMID:20523893"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of age-related behavioral decline (obsolete GO:0090647)","termid":"GO:0090647"}


id: MONDO:0016490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemoglobin C - beta-thalassemia (HbC - BT) is a form of beta-thalassemia resulting in moderate hemolytic anemia.","definition_xrefs":["Orphanet:231242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-thalassemia and related diseases","termid":"MONDO:0017145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hemoglobin C-beta-thalassemia syndrome","secondary_identifiers":["UMLS:C0221020","MEDGEN:526128","GARD:20608"],"synonyms":[{"name":"C-beta-thalassemia","type":"exact"},{"name":"HBC-beta-thalassemia syndrome","type":"exact"}],"termid":"MONDO:0016490","xrefs":{"Monarch":{"xref_id":"0016490"}}}


id: PBO:0075823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCO-spondin, pseudogene","termid":"PBO:0075823"}


id: PBO:0089767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor poly(A) polymerase Pla1","termid":"PBO:0089767"}


id: GO:0033969
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(L-gamma-glutamylamino)butanoate + H2O = 4-aminobutanoate + L-glutamate.","definition_xrefs":["EC:3.5.1.94","RHEA:19737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"gamma-glutamyl-gamma-aminobutyrate hydrolase activity","secondary_identifiers":["KEGG_REACTION:R07419","MetaCyc:RXN0-3942"],"synonyms":[{"name":"4-(glutamylamino)butanoate amidohydrolase activity","type":"related"},{"name":"PuuD","type":"related"},{"name":"YcjL","type":"related"},{"name":"gamma-glutamyl-GABA hydrolase activity","type":"related"}],"termid":"GO:0033969"}


id: GO:1900845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of monodictyphenone biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of monodictyphenone biosynthetic process","termid":"GO:1900843"},{"relation_name":"positively_regulates","term_name":"monodictyphenone biosynthetic process","termid":"GO:1900815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of monodictyphenone biosynthetic process","synonyms":[{"name":"upregulation of monodictyphenone biosynthetic process","type":"exact"}],"termid":"GO:1900845"}


id: GO:0060477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine that is part of the acrosome reaction.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-serine phosphorylation involved in acrosome reaction (obsolete GO:0060477)","termid":"GO:0060477"}


id: PBO:0046519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"estrogen receptor responsive lncRNA 1","termid":"PBO:0046519"}


id: MONDO:0001707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sarcoidosis affecting the tissues of the heart.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-familial restrictive cardiomyopathy","termid":"MONDO:0016345"},{"relation_name":"is_a","term_name":"sarcoidosis","termid":"MONDO:0019338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiac sarcoidosis","secondary_identifiers":["SCTID:75403004","NCIT:C35589","DOID:13405","UMLS:C0392077","MEDGEN:140260"],"synonyms":[{"name":"heart sarcoidosis","type":"exact"},{"name":"sarcoidosis of heart","type":"exact"}],"termid":"MONDO:0001707","xrefs":{"Monarch":{"xref_id":"0001707"}}}


id: PR:Q8X1T0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A desumoylating isopeptidase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01966","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DeSI-like protein sdu1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPYUG7.06","secondary_identifiers":["UniProtKB:Q8X1T0"],"synonyms":[{"name":"Spom972h-DESI2","type":"exact"},{"name":"meiotically up-regulated gene 67 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q8X1T0"}


id: MONDO:0971143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant mesothelioma","termid":"MONDO:0006292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pleural mesothelioma in situ","secondary_identifiers":["MEDGEN:1805153","Orphanet:675841","UMLS:C5668165"],"termid":"MONDO:0971143","xrefs":{"Monarch":{"xref_id":"0971143"}}}


id: GO:0002945
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin Kand cyclin-dependent kinase 13 (CDK13). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:22012619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin K-CDK13 complex","synonyms":[{"name":"CycK/Cdk13 complex","type":"related"}],"termid":"GO:0002945"}


id: MONDO:0021283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant teratoma that involves the mediastinum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant teratoma","termid":"MONDO:0003514"},{"relation_name":"is_a","term_name":"mediastinum teratoma","termid":"MONDO:0003518"},{"relation_name":"is_a","term_name":"extragonadal nonseminomatous germ cell tumor","termid":"MONDO:0003578"},{"relation_name":"is_a","term_name":"mediastinal malignant germ cell tumor","termid":"MONDO:0006298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant teratoma of mediastinum","secondary_identifiers":["NCIT:C4668","MEDGEN:91164","UMLS:C0349663","SCTID:278042005"],"synonyms":[{"name":"immature malignant teratoma of mediastinum","type":"exact"},{"name":"immature malignant teratoma of the mediastinum","type":"exact"},{"name":"malignant mediastinal teratoma","type":"exact"},{"name":"malignant teratoma of the mediastinum","type":"exact"},{"name":"mediastinal immature malignant teratoma","type":"exact"},{"name":"mediastinum malignant teratoma","type":"exact"}],"termid":"MONDO:0021283","xrefs":{"Monarch":{"xref_id":"0021283"}}}


id: MOD:00595
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an manose group through a glycosidic bond","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosylated residue","termid":"MOD:00434"},{"relation_name":"is_a","term_name":"mannosylated","termid":"MOD:00727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"mannosylated residue","synonyms":[{"name":"ManRes","type":"exact"}],"termid":"MOD:00595"}


id: MONDO:0030674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Teebi hypertelorism syndrome","termid":"MONDO:0030639"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Teebi hypertelorism syndrome 2","secondary_identifiers":["OMIM:619736","UMLS:C5676911","DOID:0081074","MEDGEN:1809276"],"synonyms":[{"name":"TBHS2","type":"exact"},{"name":"Teebi hypertelorism syndrome 2","type":"exact"}],"termid":"MONDO:0030674","xrefs":{"Monarch":{"xref_id":"0030674"}}}


id: MONDO:0005833
data:
  {"annotated_genes":["SJAG_04745","SJAG_01407","SJAG_00993","SJAG_02923","SJAG_02648","SJAG_01181","SJAG_02453","SJAG_02342","SJAG_03536","SJAG_00570","SJAG_03453","SJAG_01697","SJAG_02572"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012146"},{"annotations":[87499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011336"},{"annotations":[88457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013135"},{"annotations":[87805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[88306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007918"},{"annotations":[88158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011257"},{"annotations":[88764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009756"},{"annotations":[88032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011871"},{"annotations":[88025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011873"},{"annotations":[89118,89117,89119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[87599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[88484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[88274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"}]},"cv_name":"mondo","definition":"A disease involving the lymphatic part of lymphoid system.","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid system disorder","termid":"MONDO:0044986"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00570":null,"SJAG_00993":null,"SJAG_01181":null,"SJAG_01407":null,"SJAG_01697":null,"SJAG_02342":null,"SJAG_02453":null,"SJAG_02572":null,"SJAG_02648":null,"SJAG_02923":null,"SJAG_03453":null,"SJAG_03536":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic system disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:75","MEDGEN:892707","MESH:D008206","UMLS:C4021976","EFO:0007352","NCIT:C50764","SCTID:362971004"],"synonyms":[{"name":"adenopathy","type":"related"},{"name":"disease of lymphatic part of lymphoid system","type":"exact"},{"name":"disease of lympoid system","type":"related"},{"name":"disease or disorder of lymphatic part of lymphoid system","type":"exact"},{"name":"disorder of lymph node and lymphatics","type":"exact"},{"name":"disorder of lymphatic part of lymphoid system","type":"exact"},{"name":"disorder of lymphatic system","type":"exact"},{"name":"disorder of lymphoid system","type":"related"},{"name":"glands, swollen","type":"exact"},{"name":"lymphadenopathy","type":"narrow"},{"name":"lymphangiopathy","type":"narrow"},{"name":"lymphatic disease","type":"exact"},{"name":"lymphatic disorder","type":"exact"},{"name":"lymphatic part of lymphoid system disease","type":"exact"},{"name":"lymphatic part of lymphoid system disease or disorder","type":"exact"},{"name":"lympoid system disease","type":"related"},{"name":"swollen gland","type":"exact"},{"name":"swollen glands","type":"exact"}],"termid":"MONDO:0005833","terms_by_termid":{"MONDO:0007918":null,"MONDO:0008104":null,"MONDO:0009756":null,"MONDO:0011257":null,"MONDO:0011336":null,"MONDO:0011871":null,"MONDO:0011873":null,"MONDO:0011997":null,"MONDO:0012146":null,"MONDO:0012371":null,"MONDO:0013135":null,"MONDO:0013186":null,"MONDO:0033669":null},"xrefs":{"Monarch":{"xref_id":"0005833"}}}


id: GO:0042538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, an increase in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperosmotic response","termid":"GO:0006972"},{"relation_name":"is_a","term_name":"response to salt stress","termid":"GO:0009651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hyperosmotic salinity response","synonyms":[{"name":"response to hyperosmotic salt stress","type":"exact"},{"name":"salt tolerance","type":"related"}],"termid":"GO:0042538"}


id: PBO:0060583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 20","termid":"PBO:0060583"}


id: PBO:0088227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L8/L2","termid":"PBO:0088227"}


id: PBO:0111967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dsl1/NZR complex secretory pathway protein RINT1 family","termid":"PBO:0111967"}


id: GO:0072126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glomerular mesangial cell proliferation","termid":"GO:0072124"},{"relation_name":"is_a","term_name":"positive regulation of cell proliferation involved in kidney development","termid":"GO:1901724"},{"relation_name":"positively_regulates","term_name":"glomerular mesangial cell proliferation","termid":"GO:0072110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glomerular mesangial cell proliferation","termid":"GO:0072126"}


id: FYPO:0003298
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of autophosphorylation of one or more specific proteins, or of specific protein sites, is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"},{"relation_name":"is_a","term_name":"abnormal protein autophosphorylation during vegetative growth","termid":"FYPO:0003019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"decreased protein autophosphorylation during vegetative growth","synonyms":[{"name":"decreased protein autophosphorylation during mitotic cell cycle","type":"related"},{"name":"reduced protein autophosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0003298"}


id: MONDO:0015861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare uterine adnexal tumor (obsolete MONDO:0015861)","secondary_identifiers":["Orphanet:180220"],"synonyms":[{"name":"syn: Rare tumor of ovaries and fallopian tubes","type":"exact"}],"termid":"MONDO:0015861","xrefs":{"Monarch":{"xref_id":"0015861"}}}


id: FYPO:0006727
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which DNA strand elongation involved in mitotic nuclear DNA replication does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication elongation","termid":"FYPO:0006730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abolished mitotic DNA replication elongation","synonyms":[{"name":"abolished DNA strand elongation involved in mitotic DNA replication","type":"exact"},{"name":"abolished DNA strand elongation involved in nuclear cell cycle DNA replication","type":"exact"},{"name":"abolished mitotic DNA replication elongation during mitotic cell cycle","type":"related"},{"name":"abolished mitotic DNA replication elongation during vegetative growth","type":"exact"},{"name":"mitotic DNA replication elongation abolished","type":"exact"}],"termid":"FYPO:0006727"}


id: MONDO:0100605
data:
  {"annotated_genes":["SJAG_00637","SJAG_04934","SJAG_03144","SJAG_03761","SJAG_01444"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014666"},{"annotations":[87350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013722"},{"annotations":[88347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030263"},{"annotations":[87927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958018"},{"annotations":[88009,88008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011897"}]},"cv_name":"mondo","definition":"A rare hypomyelinating leukodystrophy disorder in which the cause of the disease is a variation in any of the POLR genes, including POLR1C, POLR3A or POLR3B. It is characterized by the association of dental abnormalities (delayed dentition, abnormal order of dentition, hypodontia), hypogonadotropic hypogonadism, and hypomyelinating leukodystrophy manifesting with neurodevelopmental delay or regression and/or progressive cerebellar symptoms.","definition_xrefs":["Orphanet:289494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00637":null,"SJAG_01444":null,"SJAG_03144":null,"SJAG_03761":null,"SJAG_04934":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"POLR-related leukodystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1803536","UMLS:C5679947"],"synonyms":[{"name":"4H leukodystrophy","type":"exact"}],"termid":"MONDO:0100605","terms_by_termid":{"MONDO:0011897":null,"MONDO:0013722":null,"MONDO:0014666":null,"MONDO:0030263":null,"MONDO:0958018":null},"xrefs":{"Monarch":{"xref_id":"0100605"}}}


id: GO:0061826
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The ring structure surrounding the podosome core, containing proteins such as vinculin and talin.","definition_xrefs":["PMID:23158496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"podosome","termid":"GO:0002102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"podosome ring","termid":"GO:0061826"}


id: PBO:0039076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase 4","termid":"PBO:0039076"}


id: PBO:0041847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CASK interacting protein 1","termid":"PBO:0041847"}


id: GO:0001890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin.","definition_xrefs":["GOC:add","ISBN:068340007X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"placenta development","synonyms":[{"name":"placental development","type":"exact"},{"name":"placentation","type":"exact"}],"termid":"GO:0001890"}


id: GO:0005322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete low-density lipoprotein (obsolete GO:0005322)","synonyms":[{"name":"LDL","type":"exact"},{"name":"low-density lipoprotein","type":"exact"}],"termid":"GO:0005322"}


id: MONDO:0021331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that involves the parotid gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parotid gland cancer","termid":"MONDO:0004700"},{"relation_name":"is_a","term_name":"major salivary gland carcinoma","termid":"MONDO:0006284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"carcinoma of parotid gland","secondary_identifiers":["NCIT:C6791","EFO:1000460","SCTID:254462001","UMLS:C0345602","MEDGEN:91047"],"synonyms":[{"name":"carcinoma of parotid","type":"exact"},{"name":"carcinoma of parotid gland","type":"exact"},{"name":"carcinoma of the parotid","type":"exact"},{"name":"carcinoma of the parotid gland","type":"exact"},{"name":"parotid carcinoma","type":"exact"},{"name":"parotid gland cancer","type":"broad"},{"name":"parotid gland carcinoma","type":"exact"}],"termid":"MONDO:0021331","xrefs":{"Monarch":{"xref_id":"0021331"}}}


id: GO:0000923
data:
  {"annotated_genes":["SJAG_00856","SJAG_07018","SJAG_02886","SJAG_03073","SJAG_02737","SJAG_01756","SJAG_01215","SJAG_03052","SJAG_02761","SJAG_03835","SJAG_03264","SJAG_02609"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102004,102289,102905,103355,104251,108399,110811,111571,112553,114753,118944,119197],"is_not":false,"summary":null,"term":"GO:0000923"}]},"cv_name":"cellular_component","definition":"A microtubule organizing center formed by a band of gamma-tubulin that is recruited to a circumferential band of F-actin at the midpoint of a cell and which nucleates microtubules from the cell division site at the end of mitosis.","definition_xrefs":["PMID:11792817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center","termid":"GO:0005815"},{"relation_name":"part_of","term_name":"cell division site","termid":"GO:0032153"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01215":null,"SJAG_01756":null,"SJAG_02609":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03052":null,"SJAG_03073":null,"SJAG_03264":null,"SJAG_03835":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"equatorial microtubule organizing center","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"EMTOC","type":"exact"},{"name":"equatorial microtubule organising centre","type":"exact"}],"termid":"GO:0000923","terms_by_termid":{"GO:0000923":null}}


id: PBO:0114350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasme amembrane amino acid transmembrane transporter Nrg1","termid":"PBO:0114350"}


id: MONDO:0968983
data:
  {"annotated_genes":["SJAG_03151"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89028],"is_not":false,"summary":null,"term":"MONDO:0968983"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"proteosome-associated autoinflammatory syndrome","termid":"MONDO:0009726"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03151":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005046"],"is_obsolete":false,"name":"proteasome-associated autoinflammatory syndrome 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1857440","OMIM:620796","UMLS:C5935614"],"termid":"MONDO:0968983","terms_by_termid":{"MONDO:0968983":null},"xrefs":{"Monarch":{"xref_id":"0968983"}}}


id: GO:0001746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the anatomical structures of the larval eye in Drosophila are generated and organized. The larval eye in Drosophila is a relatively simple sensory system composed of Bolwig's organs: two clusters, each composed of 12 photoreceptor cells from which axons extend in a single fascicle to the brain.","definition_xrefs":["PMID:6185380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye morphogenesis","termid":"GO:0048592"},{"relation_name":"part_of","term_name":"Bolwig's organ development","termid":"GO:0055034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Bolwig's organ morphogenesis","termid":"GO:0001746"}


id: MONDO:0002389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adenofibroma (obsolete MONDO:0002389)","termid":"MONDO:0002389","xrefs":{"Monarch":{"xref_id":"0002389"}}}


id: PBO:0069032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 277, pseudogene","termid":"PBO:0069032"}


id: MONDO:0017874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Argentine hemorrhagic fever (AHF), caused by the Junin virus (JUNV), is an acute viral hemorrhagic disease characterized by initial fever and malaise followed by gastrointestinal symptoms and in some cases hemorrhagic and neurological manifestations.","definition_xrefs":["Orphanet:319223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arenavirus hemorrhagic fever","termid":"MONDO:0005651"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Argentine hemorrhagic fever","secondary_identifiers":["MEDGEN:9211","GARD:21411","SCTID:58868000","icd11.foundation:257166193","UMLS:C0019097","DOID:0050194"],"synonyms":[{"name":"Argentinian hemorrhagic fever","type":"exact"},{"name":"Junin hemorrhagic fever","type":"exact"}],"termid":"MONDO:0017874","xrefs":{"Monarch":{"xref_id":"0017874"}}}


id: FYPO:0006412
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more histone RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells) during S phase of the mitotic cell cycle. Histone RNAs are transcribed from genes encoding histones.","definition_xrefs":["PomBase:mah","PMID:17452352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of histone gene mRNA during vegetative growth","termid":"FYPO:0004906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of histone gene mRNA during mitotic S phase","synonyms":[{"name":"decreased histone gene mRNA accumulation during mitotic S phase","type":"related"},{"name":"decreased level of histone gene RNA during mitotic S phase","type":"exact"},{"name":"decreased level of histone gene mRNA during S phase of mitotic cell cycle","type":"exact"},{"name":"decreased level of histone gene transcripts during mitotic S phase","type":"exact"},{"name":"reduced level of histone gene mRNA during mitotic S phase","type":"exact"}],"termid":"FYPO:0006412"}


id: MONDO:0006438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Synovial chondromatosis is a type of non-cancerous tumor that arises in the lining of a joint. The knee is most commonly affected, however it can affect any joint. The tumors begin as small nodules of cartilage. These nodules can separate and become loose within the joint. Some tumors may be no larger than a grain of rice. Synovial chondromatosis most commonly occurs in adults ages 20 to 50. Signs and symptoms may include pain, swelling, a decreased range of motion, and locking of the joint. The exact underlying cause of the condition is unknown. Treatment may involve surgery to remove the tumor. Recurrence of the condition is common.","definition_xrefs":["GARD:0006054"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"sarcoma","termid":"MONDO:0005089"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"connective and soft tissue neoplasm","termid":"MONDO:0044334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synovial chondromatosis","secondary_identifiers":["NCIT:C34467","EFO:1000557","MEDGEN:40275","UMLS:C0008476","MESH:D015838"],"synonyms":[{"name":"Henderson-Jones syndrome","type":"exact"},{"name":"Reichel's syndrome","type":"exact"},{"name":"synovial osteochondromatosis","type":"related"}],"termid":"MONDO:0006438","xrefs":{"Monarch":{"xref_id":"0006438"}}}


id: PR:P11620
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ras-related protein Rab-1B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03481","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.10","secondary_identifiers":["UniProtKB:P11620"],"synonyms":[{"name":"Spom972h-RAB1B","type":"exact"}],"termid":"PR:P11620"}


id: MONDO:0009136
data:
  {"annotated_genes":["SJAG_00566","SJAG_00083"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87133,87134],"is_not":false,"summary":null,"term":"MONDO:0009136"}]},"cv_name":"mondo","definition":"A dyskeratosis congenita that has material basis in an autosomal recessive mutation of NOLA3 on chromosome 15q14.","definition_xrefs":["DOID:0070015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00566":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dyskeratosis congenita, autosomal recessive 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C176925","SCTID:707272006","GARD:6300","MEDGEN:341705","UMLS:C1857144","MESH:C565611","OMIM:224230"],"synonyms":[{"name":"DKCB","type":"related"},{"name":"DKCB1","type":"exact"},{"name":"autosomal recessive dyskeratosis congenita","type":"related"},{"name":"autosomal recessive dyskeratosis congenita 1","type":"related"},{"name":"dyskeratosis congenita autosomal recessive","type":"related"},{"name":"dyskeratosis congenita, autosomal recessive 1","type":"exact"},{"name":"dyskeratosis congenita, autosomal recessive type 1","type":"exact"}],"termid":"MONDO:0009136","terms_by_termid":{"MONDO:0009136":null},"xrefs":{"Monarch":{"xref_id":"0009136"}}}


id: MONDO:0022901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Crohn disease involving a pathogenic inflammatory response in the esophagus.","definition_xrefs":["MONDO:patterns/specific_inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophagitis","termid":"MONDO:0001409"},{"relation_name":"is_a","term_name":"Crohn disease","termid":"MONDO:0005011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"Crohn disease of the esophagus","secondary_identifiers":["UMLS:C0341116","MEDGEN:574175"],"synonyms":[{"name":"Crohn's disease of the esophagus","type":"exact"},{"name":"Crohn's disease of the oesophagus","type":"exact"}],"termid":"MONDO:0022901","xrefs":{"Monarch":{"xref_id":"0022901"}}}


id: PBO:0049555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 17","termid":"PBO:0049555"}


id: MONDO:1012950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alzheimer disease that occurs in white-tufted-ear marmoset due to a mutation in the PSEN1 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"Alzheimer disease, non-human animal","termid":"MONDO:1011443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer disease, PSEN1-related, white-tufted-ear marmoset","secondary_identifiers":["OMIA:002493-9483"],"termid":"MONDO:1012950","xrefs":{"Monarch":{"xref_id":"1012950"}}}


id: GO:0072258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the interstitial fibroblasts of the metanephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney interstitial fibroblast differentiation","termid":"GO:0072071"},{"relation_name":"is_a","term_name":"cell differentiation involved in metanephros development","termid":"GO:0072202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric interstitial fibroblast differentiation","synonyms":[{"name":"metanephros interstitial cell differentiation","type":"exact"}],"termid":"GO:0072258"}


id: GO:0004528
data:
  {"annotated_genes":["SJAG_03994","SJAG_02298"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68894,111930],"is_not":false,"summary":null,"term":"GO:0004528"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential hydrolytic removal of 5'-nucleotides from the 3'-hydroxy termini of 3'-hydroxy-terminated oligonucleotides.","definition_xrefs":["EC:3.1.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exonuclease activity","termid":"GO:0004527"},{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02298":null,"SJAG_03994":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0004527","GO:0016788"],"is_obsolete":false,"name":"phosphodiesterase I activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.4.1-RXN"],"synonyms":[{"name":"5' nucleotide phosphodiesterase/alkaline phosphodiesterase I activity","type":"related"},{"name":"5'-NPDase activity","type":"related"},{"name":"5'-PDE activity","type":"related"},{"name":"5'-PDase activity","type":"related"},{"name":"5'-exonuclease activity","type":"related"},{"name":"5'-nucleotide phosphodiesterase activity","type":"related"},{"name":"5'-phosphodiesterase activity","type":"related"},{"name":"5'NPDE activity","type":"related"},{"name":"PDE I activity","type":"related"},{"name":"alkaline phosphodiesterase activity","type":"related"},{"name":"exonuclease I activity","type":"related"},{"name":"nucleotide pyrophosphatase/phosphodiesterase I activity","type":"related"},{"name":"oligonucleate 5'-nucleotidohydrolase activity","type":"related"},{"name":"orthophosphoric diester phosphohydrolase activity","type":"related"},{"name":"phosphodiesterase activity","type":"broad"}],"termid":"GO:0004528","terms_by_termid":{"GO:0004528":null}}


id: PBO:0047115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 162 member B","termid":"PBO:0047115"}


id: PBO:0071731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 29","termid":"PBO:0071731"}


id: PBO:0041732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase IV","termid":"PBO:0041732"}


id: PBO:0081544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF460 antisense RNA 1","termid":"PBO:0081544"}


id: PBO:0034131
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_develops_from","termid":"PBO:0034131"}


id: PBO:0074048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 29","termid":"PBO:0074048"}


id: PBO:0112605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein, implicated in transmembrane transport or endocytosis","termid":"PBO:0112605"}


id: GO:0051394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the activity of the nerve growth factor (NGF) receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of nerve growth factor receptor activity","synonyms":[{"name":"regulation of NGF receptor activity","type":"exact"}],"termid":"GO:0051394"}


id: MONDO:0007440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bipolar I disorder","termid":"MONDO:0001866"},{"relation_name":"is_a","term_name":"bipolar disorder","termid":"MONDO:0004985"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major affective disorder 1","secondary_identifiers":["OMIM:125480","MEDGEN:377615","DOID:0080220","MESH:C565111","UMLS:C1852197"],"synonyms":[{"name":"MAFD1","type":"exact"},{"name":"MAJOR affective disorder 1","type":"related"},{"name":"bipolar affective disorder","type":"related"},{"name":"major affective disorder 1","type":"exact"},{"name":"manic-depressive psychosis","type":"related"},{"name":"manic-depressive psychosis, autosomal","type":"related"}],"termid":"MONDO:0007440","xrefs":{"Monarch":{"xref_id":"0007440"}}}


id: GO:0032392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a transformation is induced in the geometry of a DNA double helix, resulting in a change in twist, writhe, or both, but with no change in linking number. Includes the unwinding of double-stranded DNA by helicases.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA conformation change","termid":"GO:0071103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DNA geometric change","termid":"GO:0032392"}


id: MONDO:0020663
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A malignant neoplasm characterized by the presence of atypical spindle cells.","definition_xrefs":["NCIT:C27091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"spindle cell neoplasm","termid":"MONDO:0020664"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant spindle cell neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0334230","MEDGEN:90746"],"synonyms":[{"name":"malignant spindle cell neoplasm","type":"exact"},{"name":"malignant spindle cell tumor","type":"exact"},{"name":"malignant spindle cell tumour","type":"exact"},{"name":"spindle cell cancer","type":"exact"}],"termid":"MONDO:0020663","terms_by_termid":{"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0020663"}}}


id: PBO:0042775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 85","termid":"PBO:0042775"}


id: SO:0001573
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby an intron is gained by the processed transcript; usually a result of an alteration of the donor or acceptor.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splicing_variant","termid":"SO:0001568"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intron_gain_variant","synonyms":[{"name":"intron gain","type":"exact"},{"name":"intron gain variant","type":"exact"}],"termid":"SO:0001573"}


id: GO:1900718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of violaceol II biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of violaceol II biosynthetic process","termid":"GO:1900716"},{"relation_name":"positively_regulates","term_name":"violaceol II biosynthetic process","termid":"GO:1900593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"positive regulation of violaceol II biosynthetic process","synonyms":[{"name":"activation of violaceol II anabolism","type":"exact"},{"name":"activation of violaceol II biosynthesis","type":"exact"},{"name":"activation of violaceol II biosynthetic process","type":"narrow"},{"name":"activation of violaceol II formation","type":"exact"},{"name":"activation of violaceol II synthesis","type":"exact"},{"name":"positive regulation of violaceol II anabolism","type":"exact"},{"name":"positive regulation of violaceol II biosynthesis","type":"exact"},{"name":"positive regulation of violaceol II formation","type":"exact"},{"name":"positive regulation of violaceol II synthesis","type":"exact"},{"name":"up regulation of violaceol II anabolism","type":"exact"},{"name":"up regulation of violaceol II biosynthesis","type":"exact"},{"name":"up regulation of violaceol II biosynthetic process","type":"exact"},{"name":"up regulation of violaceol II formation","type":"exact"},{"name":"up regulation of violaceol II synthesis","type":"exact"},{"name":"up-regulation of violaceol II anabolism","type":"exact"},{"name":"up-regulation of violaceol II biosynthesis","type":"exact"},{"name":"up-regulation of violaceol II biosynthetic process","type":"exact"},{"name":"up-regulation of violaceol II formation","type":"exact"},{"name":"up-regulation of violaceol II synthesis","type":"exact"},{"name":"upregulation of violaceol II anabolism","type":"exact"},{"name":"upregulation of violaceol II biosynthesis","type":"exact"},{"name":"upregulation of violaceol II biosynthetic process","type":"exact"},{"name":"upregulation of violaceol II formation","type":"exact"},{"name":"upregulation of violaceol II synthesis","type":"exact"}],"termid":"GO:1900718"}


id: GO:0016767
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 geranylgeranyl diphosphate = diphosphate + prephytoene diphosphate.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete geranylgeranyl-diphosphate geranylgeranyltransferase activity (obsolete GO:0016767)","termid":"GO:0016767"}


id: MONDO:0004033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial ovarian carcinoma (obsolete MONDO:0004033)","termid":"MONDO:0004033","xrefs":{"Monarch":{"xref_id":"0004033"}}}


id: PBO:0053027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal protein transmembrane 4 alpha","termid":"PBO:0053027"}


id: PBO:0052419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIRREL1 intronic transcript 1","termid":"PBO:0052419"}


id: PBO:0074014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 6 pseudogene 5","termid":"PBO:0074014"}


id: MONDO:0017357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient hyperammonemia of the newborn","secondary_identifiers":["MEDGEN:541358","Orphanet:289877","GARD:21159","UMLS:C0268549"],"termid":"MONDO:0017357","xrefs":{"Monarch":{"xref_id":"0017357"}}}


id: PATO:0001818
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's increasing over time.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive","termid":"PATO:0001818"}


id: MONDO:0019628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rieger's anomaly is a congenital ocular defect caused by anterior segment dysgenesis and is characterized by severe anterior chamber deformity with prominent strands and marked atrophy of the iris stroma, with hole or pseudo-hole formation and corectopia. The term covers the association of these iris and pupil anomalies with the features of AxenfeldBs anomaly.","definition_xrefs":["Orphanet:91483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iridogoniodysgenesis","termid":"MONDO:0011119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Rieger anomaly","secondary_identifiers":["UMLS:C0265341","GARD:16482","MedDRA:10059198","MEDGEN:78558"],"termid":"MONDO:0019628","xrefs":{"Monarch":{"xref_id":"0019628"}}}


id: GO:1902175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an oxidative stress-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["PMID:11672522","GOC:BHF","GOC:mtg_apoptosis","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway in response to oxidative stress","termid":"GO:0008631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"}],"termid":"GO:1902175"}


id: PBO:0044594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 4","termid":"PBO:0044594"}


id: GO:0046557
data:
  {"annotated_genes":["SJAG_03646","SJAG_01171","SJAG_05001"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75026,103880,103881],"is_not":false,"summary":null,"term":"GO:0046557"}]},"cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->6) linkages in (1->6)-beta-D-glucans.","definition_xrefs":["EC:3.2.1.75"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01171":null,"SJAG_03646":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"glucan endo-1,6-beta-glucosidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.2.1.75-RXN"],"synonyms":[{"name":"1,6-beta-D-glucan glucanohydrolase activity","type":"related"},{"name":"beta-1,6-glucan 6-glucanohydrolase activity","type":"related"},{"name":"beta-1,6-glucan hydrolase activity","type":"related"},{"name":"beta-1,6-glucanase activity","type":"related"},{"name":"beta-1,6-glucanase-pustulanase activity","type":"related"},{"name":"beta-1->6-glucan hydrolase activity","type":"related"},{"name":"endo-(1,6)-beta-D-glucanase activity","type":"exact"},{"name":"endo-(1->6)-beta-D-glucanase activity","type":"related"},{"name":"endo-1,6-beta-D-glucanase activity","type":"related"},{"name":"endo-1,6-beta-glucanase activity","type":"related"},{"name":"endo-beta-1,6-glucanase activity","type":"related"}],"termid":"GO:0046557","terms_by_termid":{"GO:0046557":null}}


id: PBO:0060668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudE neurodevelopment protein 1 pseudogene 1","termid":"PBO:0060668"}


id: GO:1905358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of snRNA pseudouridine synthesis.","definition_xrefs":["PMID:27268497","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of RNA metabolic process","termid":"GO:0051254"},{"relation_name":"is_a","term_name":"regulation of snRNA pseudouridine synthesis","termid":"GO:1905356"},{"relation_name":"positively_regulates","term_name":"snRNA pseudouridine synthesis","termid":"GO:0031120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016073"},{"rel_name":"regulates","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0016073","GO:0008150"],"is_obsolete":false,"name":"positive regulation of snRNA pseudouridine synthesis","synonyms":[{"name":"activation of snRNA pseudouridine synthesis","type":"narrow"},{"name":"up regulation of snRNA pseudouridine synthesis","type":"exact"},{"name":"up-regulation of snRNA pseudouridine synthesis","type":"exact"},{"name":"upregulation of snRNA pseudouridine synthesis","type":"exact"}],"termid":"GO:1905358"}


id: MONDO:0024771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"distal myopathy","termid":"MONDO:0018949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, distal, 7, adult-onset, X-linked","secondary_identifiers":["MEDGEN:1808663","OMIM:301075","UMLS:C5676880"],"synonyms":[{"name":"MPD7","type":"exact"},{"name":"myopathy, distal, 7, adult-onset, X-linked","type":"exact"}],"termid":"MONDO:0024771","xrefs":{"Monarch":{"xref_id":"0024771"}}}


id: PBO:0031000
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_degradation_during_vegetative_growth","termid":"PBO:0031000"}


id: PR:Q9UTH9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA-dihydrouridine synthase 3-like that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01833","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-dihydrouridine(47) synthase [NAD(P)(+)] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16.04","secondary_identifiers":["UniProtKB:Q9UTH9"],"synonyms":[{"name":"Spom972h-DUS3L","type":"exact"},{"name":"tRNA-dihydrouridine synthase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTH9"}


id: MONDO:0976138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukodystrophy, demyelinating, adult-onset","termid":"MONDO:0976138","xrefs":{"Monarch":{"xref_id":"0976138"}}}


id: GO:0140361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cyclic-GMP-AMP from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:31126740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"},{"relation_name":"is_a","term_name":"cyclic nucleotide transport","termid":"GO:0070729"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"guanine nucleotide transmembrane transport","termid":"GO:1903790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"cyclic-GMP-AMP transmembrane import across plasma membrane","termid":"GO:0140361"}


id: PBO:0078025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 15","termid":"PBO:0078025"}


id: GO:0009666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the outer membrane of a plastid.","definition_xrefs":["GOC:ai","GOC:jl","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane organization","termid":"GO:0009668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"plastid outer membrane organization","synonyms":[{"name":"plastid outer membrane organisation","type":"exact"},{"name":"plastid outer membrane organization and biogenesis","type":"related"}],"termid":"GO:0009666"}


id: FYPO:0006571
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cyclin-dependent protein kinase activity is increased during a cellular response to a pheromone.","definition_xrefs":["PMID:9614176","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cyclin-dependent protein kinase activity","termid":"FYPO:0004319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"increased cyclin-dependent protein kinase activity during cellular response to pheromone","termid":"FYPO:0006571"}


id: GO:0006667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sphinganine, D-erythro-2-amino-1,3-octadecanediol.","definition_xrefs":["PMID:29165427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"},{"relation_name":"is_a","term_name":"sphingoid metabolic process","termid":"GO:0046519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"sphinganine metabolic process","synonyms":[{"name":"dihydrosphingosine metabolic process","type":"exact"},{"name":"dihydrosphingosine metabolism","type":"exact"},{"name":"sphinganine metabolism","type":"exact"}],"termid":"GO:0006667"}


id: MONDO:0000724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A language disorder characterized by difficulty in language acquisition despite otherwise normal development and in the absence of any obvious explanatory factors.","definition_xrefs":["DOID:0060244","PMID:19646677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"language disorder","termid":"MONDO:0004750"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"specific language impairment","secondary_identifiers":["EFO:1001510","OMIMPS:606711","Orphanet:458713","UMLS:C0454651","MEDGEN:627772"],"synonyms":[{"name":"language impairment (disease)","type":"exact"}],"termid":"MONDO:0000724","xrefs":{"Monarch":{"xref_id":"0000724"}}}


id: GO:0060399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the growth hormone receptor signaling pathway. The growth hormone receptor signaling pathway is the series of molecular signals generated as a consequence of growth hormone receptor binding to its physiological ligand.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of growth hormone receptor signaling pathway","termid":"GO:0060398"},{"relation_name":"positively_regulates","term_name":"growth hormone receptor signaling pathway","termid":"GO:0060396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of growth hormone receptor signaling pathway","synonyms":[{"name":"positive regulation of growth hormone receptor signalling pathway","type":"exact"}],"termid":"GO:0060399"}


id: PBO:0086571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YPR053C is not an essential gene; partially overlaps verified ORF NHP6A/YPR052C","termid":"PBO:0086571"}


id: GO:1903722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of centriole elongation.","definition_xrefs":["GOC:als","GO_REF:0000058","GOC:TermGenie","PMID:20616062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"regulates","term_name":"centriole elongation","termid":"GO:0061511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of centriole elongation","termid":"GO:1903722"}


id: PBO:0091811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein with a role in ER insertion of tail-anchored membrane proteins","termid":"PBO:0091811"}


id: GO:0036252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a menadione stimulus. Menadione (also called vitamin K3) is a naphthoquinone having a methyl substituent at the 2-position.","definition_xrefs":["GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to menadione (obsolete GO:0036252)","synonyms":[{"name":"positive regulation of transcription from RNA polymerase II promoter in response to menadione stress","type":"narrow"}],"termid":"GO:0036252"}


id: MONDO:0009374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyprolinemia","secondary_identifiers":["ICD9:270.8","MESH:C562669","MEDGEN:75691","SCTID:25739007","UMLS:C0268531","HP:0003260","OMIM:237000"],"synonyms":[{"name":"4 alpha hydroxy-L-proline oxidase deficiency","type":"related"},{"name":"4-hydroxy-L-proline oxidase deficiency","type":"related"},{"name":"HYDROXYPROLINEMIA","type":"related"},{"name":"Hydroxyprolinemia","type":"exact"},{"name":"hydroxyprolinemia","type":"exact"},{"name":"hydroxyprolinemia (disease)","type":"exact"}],"termid":"MONDO:0009374","xrefs":{"Monarch":{"xref_id":"0009374"}}}


id: PR:O74986
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctp1 gene.","definition_xrefs":["UniProtKB:O74986","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA endonuclease ctp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.08","synonyms":[{"name":"SAE2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ctp1","type":"exact"},{"name":"double-strand break repair protein ctp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotically up-regulated gene 38 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nbs1-interacting protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sporulation in the absence of SPO11 protein 2 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74986"}


id: GO:0043013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or prevents the binding and fusion of a sperm to the oocyte plasma membrane.","definition_xrefs":["PMID:34459848","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fusion of sperm to egg plasma membrane","termid":"GO:0043012"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"fusion of sperm to egg plasma membrane involved in single fertilization","termid":"GO:0007342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fusion of sperm to egg plasma membrane","synonyms":[{"name":"down regulation of fusion of sperm to egg plasma membrane","type":"exact"},{"name":"down-regulation of fusion of sperm to egg plasma membrane","type":"exact"},{"name":"downregulation of fusion of sperm to egg plasma membrane","type":"exact"},{"name":"inhibition of fusion of sperm to egg plasma membrane","type":"narrow"},{"name":"inhibition of sperm-oocyte fusion","type":"narrow"},{"name":"negative regulation of sperm-oocyte fusion","type":"narrow"}],"termid":"GO:0043013"}


id: PBO:0013082
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement E. coli hisH","termid":"PBO:0013082"}


id: GO:1903981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to enterobactin.","definition_xrefs":["GOC:mr","GO_REF:0000067","GOC:TermGenie","PMID:21951132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macrolide binding","termid":"GO:0005527"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"enterobactin binding","synonyms":[{"name":"enterochelin binding","type":"exact"},{"name":"siderophore binding","type":"broad"}],"termid":"GO:1903981"}


id: PBO:0050366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 69","termid":"PBO:0050366"}


id: PBO:0054485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1885","termid":"PBO:0054485"}


id: MONDO:0000907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete amelogenesis imperfecta type 1C (obsolete MONDO:0000907)","termid":"MONDO:0000907","xrefs":{"Monarch":{"xref_id":"0000907"}}}


id: PBO:0005764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxamine/pyridoxine/pyridoxal transmembrane transporter (predicted)","termid":"PBO:0005764"}


id: GO:0071224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptidoglycan","termid":"GO:0032494"},{"relation_name":"is_a","term_name":"cellular response to molecule of bacterial origin","termid":"GO:0071219"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to peptidoglycan","termid":"GO:0071224"}


id: PBO:0087197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA m5C methyltransferase; methylates cytosine at position 2870 of 25S rRNA; has an essential function independent of rRNA methylation; contains seven beta-strand methyltransferase motif; essential for processing and maturation of 27S pre-rRNA and large ribosomal subunit biogenesis; localized to the nucleolus; constituent of 66S pre-ribosomal particles; rRNA methylation defect and lethality are functionally complemented by human NOP2, a gene upregulated in cancer","termid":"PBO:0087197"}


id: PBO:0052308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA0319 like","termid":"PBO:0052308"}


id: PBO:0080359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 14 pseudogene","termid":"PBO:0080359"}


id: MONDO:0010235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability-psychosis-macroorchidism syndrome","secondary_identifiers":["Orphanet:3077","GARD:3506","OMIM:300055","SCTID:702356009","MEDGEN:163232","ICD9:758.89","UMLS:C0796222","DOID:0060827"],"synonyms":[{"name":"Lindsay-Burn syndrome","type":"exact"},{"name":"MRXS13","type":"exact"},{"name":"PPM-X","type":"exact"},{"name":"PPM-X syndrome","type":"related"},{"name":"X-linked intellectual disability 79","type":"exact"},{"name":"X-linked intellectual disability with spasticity","type":"exact"},{"name":"X-linked mental retardation 79","type":"exact"},{"name":"X-linked mental retardation with spasticity","type":"exact"},{"name":"intellectual deficit, X-linked - psychosis - macroorchidism","type":"related"},{"name":"intellectual developmental disorder, X-linked, syndromic 13, X-linked recessive","type":"exact"},{"name":"intellectual disability psychosis macroorchidism","type":"related"},{"name":"intellectual disability with psychosis, pyramidal signs, and macroorchidism","type":"exact"},{"name":"intellectual disability, X-linked 16","type":"related"},{"name":"intellectual disability, X-linked 79","type":"related"},{"name":"intellectual disability, X-linked, syndromic 13","type":"exact"},{"name":"intellectual disability, X-linked, syndromic type 13","type":"exact"},{"name":"intellectual disability, X-linked, with spasticity","type":"related"},{"name":"mental retardation psychosis macroorchidism","type":"related"},{"name":"mental retardation with psychosis, pyramidal signs, and macroorchidism","type":"exact"},{"name":"mental retardation, X-linked 16","type":"related"},{"name":"mental retardation, X-linked 79","type":"related"},{"name":"mental retardation, X-linked, syndromic 13","type":"exact"},{"name":"mental retardation, X-linked, syndromic type 13","type":"exact"},{"name":"mental retardation, X-linked, with spasticity","type":"related"}],"termid":"MONDO:0010235","xrefs":{"Monarch":{"xref_id":"0010235"}}}


id: GO:0098664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a G protein-coupled serotonin receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"G protein-coupled serotonin receptor signaling pathway","synonyms":[{"name":"G-protein coupled serotonin receptor signaling pathway","type":"exact"}],"termid":"GO:0098664"}


id: PBO:0003878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex subunit Vps71","termid":"PBO:0003878"}


id: MONDO:0850282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asthma that is characterized by the development of persistent airway inflammation and recurrent attacks of breathlessness and wheezing, which vary in severity and frequency.","definition_xrefs":["DOID:0080809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asthma","termid":"MONDO:0004979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic asthma","secondary_identifiers":["UMLS:C0877430","MEDGEN:1843404"],"synonyms":[{"name":"adult-onset severe asthma","type":"narrow"},{"name":"persistent mild asthma","type":"narrow"},{"name":"persistent moderate asthma","type":"narrow"},{"name":"persistent severe asthma","type":"narrow"}],"termid":"MONDO:0850282","xrefs":{"Monarch":{"xref_id":"0850282"}}}


id: PBO:0029258
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_G1/S_phase_transition_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0029258"}


id: PBO:0112994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adenylate kinase, required for purine metabolism; controls ATP homeostasis; localized to the cytoplasm and the mitochondria; lacks cleavable signal sequence; protein abundance increases in response to DNA replication stress; mutations affecting Adk1p catalytic activity deregulate expression of phosphate utilization genes PHO5 and PHO84; human homolog AK1 can complement yeast adk1 mutant","termid":"PBO:0112994"}


id: PBO:0034501
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_UV_during_late_mitotic_G2_phase","termid":"PBO:0034501"}


id: GO:1901346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any negative regulation of vasculature development that is involved in developing an avascular cornea of a camera-type eye.","definition_xrefs":["PMID:17051153","GOC:uh","GOC:TermGenie","PMID:16849433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vasculature development","termid":"GO:1901343"},{"relation_name":"part_of","term_name":"avascular cornea development in camera-type eye","termid":"GO:0036331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vasculature development involved in avascular cornea development in camera-type eye","synonyms":[{"name":"down regulation of vascular system development involved in avascular cornea development","type":"related"},{"name":"down regulation of vascular system development involved in avascular cornea development in camera-type eye","type":"related"},{"name":"down regulation of vasculature development involved in avascular cornea development","type":"exact"},{"name":"down regulation of vasculature development involved in avascular cornea development in camera-type eye","type":"exact"},{"name":"down-regulation of vascular system development involved in avascular cornea development","type":"related"},{"name":"down-regulation of vascular system development involved in avascular cornea development in camera-type eye","type":"related"},{"name":"down-regulation of vasculature development involved in avascular cornea development","type":"exact"},{"name":"down-regulation of vasculature development involved in avascular cornea development in camera-type eye","type":"exact"},{"name":"downregulation of vascular system development involved in avascular cornea development","type":"related"},{"name":"downregulation of vascular system development involved in avascular cornea development in camera-type eye","type":"related"},{"name":"downregulation of vasculature development involved in avascular cornea development","type":"exact"},{"name":"downregulation of vasculature development involved in avascular cornea development in camera-type eye","type":"exact"},{"name":"inhibition of vascular system development involved in avascular cornea development","type":"related"},{"name":"inhibition of vascular system development involved in avascular cornea development in camera-type eye","type":"related"},{"name":"inhibition of vasculature development involved in avascular cornea development","type":"narrow"},{"name":"inhibition of vasculature development involved in avascular cornea development in camera-type eye","type":"narrow"},{"name":"negative regulation of vascular system development involved in avascular cornea development","type":"related"},{"name":"negative regulation of vascular system development involved in avascular cornea development in camera-type eye","type":"related"},{"name":"negative regulation of vasculature development involved in avascular cornea development","type":"exact"}],"termid":"GO:1901346"}


id: GO:0090741
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any membrane that is part of a pigment granule.","definition_xrefs":["PMID:11294610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"pigment granule","termid":"GO:0048770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"pigment granule membrane","termid":"GO:0090741"}


id: PATO:0001358
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having a knob or knoblike protuberance.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protruding","termid":"PATO:0001598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"umbonate","termid":"PATO:0001358"}


id: MONDO:0005520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bone softening and weakening usually caused by deficiency or impaired metabolism of vitamin D. Deficiency of calcium, magnesium, or phosphorus may also cause rickets. It predominantly affects children who suffer from severe malnutrition. It manifests with bone pain, fractures, muscle weakness, and skeletal deformities.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone remodeling disease","termid":"MONDO:0000833"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rickets","secondary_identifiers":["ICD9:268.0","MESH:D012279","DOID:10609","GARD:5700","SCTID:68295002","MEDGEN:48470","HP:0002748","NCIT:C26878","EFO:0005583","SCTID:41345002","UMLS:C0035579"],"synonyms":[{"name":"active rickets","type":"related"},{"name":"hypovitaminosis D","type":"related"},{"name":"nutritional rickets","type":"related"},{"name":"rachitis","type":"exact"},{"name":"rickets","type":"exact"},{"name":"rickets (disease)","type":"exact"},{"name":"vitamin D deficiency disease","type":"related"},{"name":"vitamin D hydroxylation-deficient rickets","type":"exact"},{"name":"vitamin-D deficiency rickets","type":"related"}],"termid":"MONDO:0005520","xrefs":{"Monarch":{"xref_id":"0005520"}}}


id: MONDO:0005098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sudden loss of neurological function secondary to hemorrhage or ischemia in the brain parenchyma due to a vascular event.","definition_xrefs":["NCIT:C3390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stroke disorder","secondary_identifiers":["NIFSTD:birnlex_12783","MEDGEN:52522","MESH:D020521","SCTID:230690007","UMLS:C0038454","EFO:0000712","HP:0001297"],"synonyms":[{"name":"CVA","type":"exact"},{"name":"CVA, cerebrovascular accident","type":"exact"},{"name":"cerebral infarction","type":"related"},{"name":"cerebrovascular accident","type":"exact"},{"name":"cerebrovascular accident, (CVA)","type":"exact"},{"name":"stroke","type":"exact"},{"name":"stroke syndrome","type":"exact"},{"name":"syndrome, stroke","type":"exact"},{"name":"undetermined stroke","type":"exact"}],"termid":"MONDO:0005098","xrefs":{"Monarch":{"xref_id":"0005098"}}}


id: MONDO:0007826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incisors, shovel-shaped","secondary_identifiers":["MEDGEN:278058","OMIM:147400","UMLS:C1409763"],"synonyms":[{"name":"Sinodonty","type":"related"},{"name":"incisors, shovel-shaped","type":"exact"}],"termid":"MONDO:0007826","xrefs":{"Monarch":{"xref_id":"0007826"}}}


id: PBO:0062807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 7","termid":"PBO:0062807"}


id: PBO:0040767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 3 pseudogene 2","termid":"PBO:0040767"}


id: GO:2000923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of arabinoxylan-containing compound catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of arabinoxylan-containing compound catabolic process","termid":"GO:2000921"},{"relation_name":"is_a","term_name":"positive regulation of xylan catabolic process","termid":"GO:2001002"},{"relation_name":"positively_regulates","term_name":"arabinoxylan-containing compound catabolic process","termid":"GO:2000888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of arabinoxylan-containing compound catabolic process","synonyms":[{"name":"positive regulation of arabinoxylan catabolism","type":"exact"}],"termid":"GO:2000923"}


id: GO:0002874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a chronic inflammatory response to an antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chronic inflammatory response","termid":"GO:0002676"},{"relation_name":"is_a","term_name":"regulation of inflammatory response to antigenic stimulus","termid":"GO:0002861"},{"relation_name":"regulates","term_name":"chronic inflammatory response to antigenic stimulus","termid":"GO:0002439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chronic inflammatory response to antigenic stimulus","termid":"GO:0002874"}


id: FYPO:0001692
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to purvalanol A. Cells stop growing (and may die) at a concentration of purvalanol A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002683","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to purvalanol A","synonyms":[{"name":"hypersensitive to purvalanol A","type":"exact"},{"name":"sensitive to purvalanol A during mitotic cell cycle","type":"related"},{"name":"sensitive to purvalanol A during vegetative growth","type":"exact"}],"termid":"FYPO:0001692"}


id: PBO:0069382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 642, pseudogene","termid":"PBO:0069382"}


id: PBO:0089915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIB complex subunit Bdp1","termid":"PBO:0089915"}


id: PBO:0055766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia NUP98 fusion partner 1","termid":"PBO:0055766"}


id: MONDO:0018455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dysostosis of genetic origin with limb anomaly as a major feature (obsolete MONDO:0018455)","secondary_identifiers":["Orphanet:404571"],"termid":"MONDO:0018455","xrefs":{"Monarch":{"xref_id":"0018455"}}}


id: GO:0043174
data:
  {"annotated_genes":["SJAG_05029","SJAG_01070","SJAG_02179","SJAG_00134","SJAG_03096","SJAG_06634","SJAG_01859","SJAG_04264","SJAG_03881","SJAG_01781"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100498,100499],"is_not":false,"summary":null,"term":"GO:0043174"},{"annotations":[118845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[71666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[75199,95641,62512,67880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[115810,99651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"}]},"cv_name":"biological_process","definition":"Any process which produces a nucleotide, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose (a deoxyribonucleotide), from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside biosynthetic process","termid":"GO:0009163"},{"relation_name":"is_a","term_name":"metabolic compound salvage","termid":"GO:0043094"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00134":null,"SJAG_01070":null,"SJAG_01781":null,"SJAG_01859":null,"SJAG_02179":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_04264":null,"SJAG_05029":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nucleoside salvage","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"termid":"GO:0043174","terms_by_termid":{"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0043097":null,"GO:0043174":null}}


