# terms

id: GO:1904973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of viral translation.","definition_xrefs":["GOC:bhm","GO_REF:0000058","GOC:TermGenie","PMID:19666601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of viral process","termid":"GO:0048524"},{"relation_name":"is_a","term_name":"regulation of viral translation","termid":"GO:1904971"},{"relation_name":"positively_regulates","term_name":"viral translation","termid":"GO:0019081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of viral translation","synonyms":[{"name":"activation of viral protein anabolism","type":"narrow"},{"name":"activation of viral protein biosynthesis","type":"narrow"},{"name":"activation of viral protein biosynthetic process","type":"narrow"},{"name":"activation of viral protein formation","type":"narrow"},{"name":"activation of viral protein synthesis","type":"narrow"},{"name":"activation of viral translation","type":"narrow"},{"name":"positive regulation of viral protein anabolism","type":"exact"},{"name":"positive regulation of viral protein biosynthesis","type":"exact"},{"name":"positive regulation of viral protein biosynthetic process","type":"exact"},{"name":"positive regulation of viral protein formation","type":"exact"},{"name":"positive regulation of viral protein synthesis","type":"exact"},{"name":"up regulation of viral protein anabolism","type":"exact"},{"name":"up regulation of viral protein biosynthesis","type":"exact"},{"name":"up regulation of viral protein biosynthetic process","type":"exact"},{"name":"up regulation of viral protein formation","type":"exact"},{"name":"up regulation of viral protein synthesis","type":"exact"},{"name":"up regulation of viral translation","type":"exact"},{"name":"up-regulation of viral protein anabolism","type":"exact"},{"name":"up-regulation of viral protein biosynthesis","type":"exact"},{"name":"up-regulation of viral protein biosynthetic process","type":"exact"},{"name":"up-regulation of viral protein formation","type":"exact"},{"name":"up-regulation of viral protein synthesis","type":"exact"},{"name":"up-regulation of viral translation","type":"exact"},{"name":"upregulation of viral protein anabolism","type":"exact"},{"name":"upregulation of viral protein biosynthesis","type":"exact"},{"name":"upregulation of viral protein biosynthetic process","type":"exact"},{"name":"upregulation of viral protein formation","type":"exact"},{"name":"upregulation of viral protein synthesis","type":"exact"},{"name":"upregulation of viral translation","type":"exact"}],"termid":"GO:1904973"}


id: GO:2001269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of cysteine-type endopeptidase activity involved in apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway (obsolete GO:2001269)","synonyms":[{"name":"positive regulation of cysteine-type endopeptidase activity involved in apoptotic signalling pathway","type":"exact"},{"name":"positive regulation of initiator caspase activity","type":"narrow"}],"termid":"GO:2001269"}


id: MONDO:0015898
data:
  {"annotated_genes":["SJAG_02148","SJAG_04270","SJAG_02696"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013310"},{"annotations":[87390,87391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011503"}]},"cv_name":"mondo","definition":"Abnormal sex differentiation or congenital disorders of sex development caused by abnormal levels of steroid hormones expressed by the gonads or the adrenal glands, such as in congenital adrenal hyperplasia and adrenal cortex neoplasms. Due to abnormal steroid biosynthesis, clinical features include virilism in females; feminization in males; or precocious sexual development in children.","definition_xrefs":["MESH:D047808"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare genetic adrenal disease (obsolete MONDO:0015971)","termid":"MONDO:0015971"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"},{"relation_name":"is_a","term_name":"steroid metabolism disease","termid":"MONDO:0045012"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02148":null,"SJAG_02696":null,"SJAG_04270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"adrenogenital syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:131153029","SCTID:267395000","MEDGEN:86215","UMLS:C0302280","GARD:20226","MedDRA:10061630","Orphanet:181412","ICD9:255.2"],"synonyms":[{"name":"adrenogenital disorder","type":"exact"},{"name":"adrenogenital syndrome","type":"exact"},{"name":"androgenital syndrome","type":"exact"},{"name":"congenital adrenal hyperplasia","type":"related"}],"termid":"MONDO:0015898","terms_by_termid":{"MONDO:0011503":null,"MONDO:0013310":null},"xrefs":{"Monarch":{"xref_id":"0015898"}}}


id: PBO:0083003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-Amino acid N-acetyltransferase that detoxifies D-amino acids; catalyzes N-acetylation of D-amino acids through ordered bi-bi mechanism in which acetyl-CoA is first substrate bound and CoA is last product liberated; acetylates histones and polyamines, also autoacetylates","termid":"PBO:0083003"}


id: PBO:0028738
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-hercynylcysteine_sulfoxide_absent_from_cell","termid":"PBO:0028738"}


id: PBO:0027067
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_metabolic_process","termid":"PBO:0027067"}


id: PBO:0077702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"troponin C1, slow skeletal and cardiac type","termid":"PBO:0077702"}


id: PBO:0086245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that may be involved in pH regulation; probable ortholog of A. nidulans PalC, which is involved in pH regulation and binds to the ESCRT-III complex; null mutant does not properly process Rim101p and has decreased resistance to rapamycin; GFP-fusion protein is cytoplasmic; relative distribution to cytoplasm increases upon DNA replication stress","termid":"PBO:0086245"}


id: MONDO:1011806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immune-mediated myositis, non-human animal","secondary_identifiers":["OMIA:002141"],"termid":"MONDO:1011806","xrefs":{"Monarch":{"xref_id":"1011806"}}}


id: MONDO:0016267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Undifferentiated carcinoma of the corpus uteri is a rare cancer of corpus uteri presenting as a large, polypoid, intraluminal mass with necrosis, composed of small to intermediate-size, relatively uniform, dyshesive cells displaying no differentiation. It usually presents with dysfunctional bleeding or vaginal discharge and, less often, abdominal pain. Association with Lynch syndrome was reported.","definition_xrefs":["Orphanet:213721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine carcinoma","termid":"MONDO:0005213"},{"relation_name":"is_a","term_name":"undifferentiated carcinoma","termid":"MONDO:0005617"},{"relation_name":"is_a","term_name":"uterine corpus cancer","termid":"MONDO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"undifferentiated carcinoma of the corpus uteri","secondary_identifiers":["ICD10CM:C54.9","GARD:20480","MEDGEN:1638762","UMLS:C4707822"],"synonyms":[{"name":"body of uterus undifferentiated carcinoma","type":"exact"},{"name":"endometrial undifferentiated carcinoma","type":"related"}],"termid":"MONDO:0016267","xrefs":{"Monarch":{"xref_id":"0016267"}}}


id: PBO:0076392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor associated calcium signal transducer 2","termid":"PBO:0076392"}


id: GO:0034964
data:
  {"annotated_genes":["SJAG_04754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000495"}]},"cv_name":"biological_process","definition":"Any process involved in the conversion of a primary box H/ACA type small RNA transcript into a mature box H/ACA RNA.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"box H/ACA sno(s)RNA metabolic process","termid":"GO:0033979"},{"relation_name":"is_a","term_name":"sno(s)RNA processing","termid":"GO:0043144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0016074","GO:0010467"],"is_obsolete":false,"name":"box H/ACA sno(s)RNA processing","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"box H/ACA sRNA processing","type":"narrow"},{"name":"box H/ACA snoRNA processing","type":"narrow"}],"termid":"GO:0034964","terms_by_termid":{"GO:0000495":null}}


id: MONDO:0032942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly and dysmorphic facies","secondary_identifiers":["OMIM:618828","UMLS:C5394218","Orphanet:662179","MEDGEN:1719418"],"synonyms":[{"name":"NEDMIDF","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY AND DYSMORPHIC FACIES","type":"related"},{"name":"nabais sa-de vries syndrome, type 1","type":"exact"}],"termid":"MONDO:0032942","xrefs":{"Monarch":{"xref_id":"0032942"}}}


id: PBO:0076363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SZT2 antisense RNA 1","termid":"PBO:0076363"}


id: PBO:0005396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsk1 complex gamma subunit (predicted)","termid":"PBO:0005396"}


id: PBO:0117176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNGB3 antisense RNA 1","termid":"PBO:0117176"}


id: PBO:0049385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF3C6 pseudogene 1","termid":"PBO:0049385"}


id: PATO:0002348
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer resembling wood.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/ligneous"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligneous","termid":"PATO:0002348"}


id: MONDO:0007449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermo-odonto dysplasia belongs to the group of tricho-odonto-onychial dysplasias. It is characterized by signs of variable severity: dry and thin skin, dental anomalies, nail alteration and trichodysplasia. Fourteen cases have been described so far. Autosomal dominant transmission is likely.","definition_xrefs":["Orphanet:1660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dermo-odonto dysplasia","secondary_identifiers":["MESH:C565103","SCTID:721091003","MEDGEN:377602","UMLS:C1852144","OMIM:125640","GARD:1816"],"synonyms":[{"name":"DERMOODONTODYSPLASIA","type":"related"},{"name":"dermo odontodysplasia","type":"related"},{"name":"dermo-odonto dysplasia","type":"exact"},{"name":"dermo-odonto-dysplasia","type":"related"},{"name":"dermoodonto dysplasia","type":"related"},{"name":"ectodermal dysplasia, hair-nail-Tooth type","type":"related"}],"termid":"MONDO:0007449","xrefs":{"Monarch":{"xref_id":"0007449"}}}


id: GO:0010048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of thermal induction in plants in which flowering is promoted by exposure to low temperatures.","definition_xrefs":["ISBN:0521591392","GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cold","termid":"GO:0009409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vernalization response","termid":"GO:0010048"}


id: PBO:0077973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon CGC) 1-1","termid":"PBO:0077973"}


id: PBO:0036436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface adhesion protein for conjugation Map4","termid":"PBO:0036436"}


id: PBO:0047395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXO34 antisense RNA 1","termid":"PBO:0047395"}


id: GO:0008657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of ATP-hydrolyzing DNA topoisomerase. ATP-hydrolyzing DNA topoisomerase catalyzes the DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"ATPase inhibitor activity","termid":"GO:0042030"},{"relation_name":"is_a","term_name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) regulator activity","termid":"GO:0072586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0004857","GO:0140678","GO:0003674","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity","synonyms":[{"name":"DNA gyrase inhibitor activity","type":"exact"}],"termid":"GO:0008657"}


id: GO:0019285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of betaine (N-trimethylglycine) from the oxidation of choline.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline metabolic process","termid":"GO:0019695"},{"relation_name":"is_a","term_name":"glycine betaine biosynthetic process","termid":"GO:0031456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycine betaine biosynthetic process from choline","synonyms":[{"name":"N-trimethylglycine biosynthesis from choline","type":"exact"},{"name":"N-trimethylglycine biosynthetic process from choline","type":"exact"},{"name":"choline oxidation","type":"exact"},{"name":"glycine betaine anabolism from choline","type":"exact"},{"name":"glycine betaine formation from choline","type":"exact"},{"name":"glycine betaine synthesis from choline","type":"exact"}],"termid":"GO:0019285"}


id: GO:0051067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 6,7-dihydropteridine, a bicyclic compound with the formula C6H6N4.","definition_xrefs":["PMID:2557335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pteridine-containing compound metabolic process","termid":"GO:0042558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dihydropteridine metabolic process","synonyms":[{"name":"6,7-dihydropteridine metabolic process","type":"exact"},{"name":"dihydropteridine metabolism","type":"exact"},{"name":"dihydropteridine reduction","type":"narrow"}],"termid":"GO:0051067"}


id: PATO:0001176
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001176 deaf (obsolete PATO:0001176)","termid":"PATO:0001176"}


id: PBO:0067127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 173, pseudogene","termid":"PBO:0067127"}


id: MONDO:0859235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"auditory neuropathy","termid":"MONDO:0021944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"auditory neuropathy, autosomal dominant 3","secondary_identifiers":["DOID:0112373","OMIM:619832","MEDGEN:1805371","UMLS:C5676964"],"termid":"MONDO:0859235","xrefs":{"Monarch":{"xref_id":"0859235"}}}


id: MONDO:0015778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A hypothyroidism that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic hypothyroidism (obsolete MONDO:0015778)","secondary_identifiers":["Orphanet:177107"],"synonyms":[{"name":"syndrome associated with hypothyroidism","type":"exact"},{"name":"syndromic hypothyroidism","type":"exact"}],"termid":"MONDO:0015778","xrefs":{"Monarch":{"xref_id":"0015778"}}}


id: PBO:0080614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 48","termid":"PBO:0080614"}


id: MONDO:0018018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-familial restrictive cardiomyopathy","termid":"MONDO:0016345"},{"relation_name":"is_a","term_name":"amyloidosis","termid":"MONDO:0019065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"wild type ATTR amyloidosis","secondary_identifiers":["Orphanet:330001","DOID:0080937","UMLS:C0342623","ICD9:277.39","GARD:21501","MEDGEN:87446","SCTID:237877004","NANDO:1200212"],"synonyms":[{"name":"ATTRwt amyloidosis","type":"exact"},{"name":"ATTRwt-related amyloidosis","type":"exact"},{"name":"SSA","type":"exact"},{"name":"Senile systemic amyloidosis","type":"exact"},{"name":"wild type ATTR-related amyloidosis","type":"exact"}],"termid":"MONDO:0018018","xrefs":{"Monarch":{"xref_id":"0018018"}}}


id: SO:0001246
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The loop of the hairpin loop formed by folding of the pre-miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA_primary_transcript_region","termid":"SO:0001243"},{"relation_name":"part_of","term_name":"pre_miRNA","termid":"SO:0001244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miRNA_loop","synonyms":[{"name":"miRNA loop","type":"exact"}],"termid":"SO:0001246"}


id: GO:0050253
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: retinyl palmitate + H2O = retinol + palmitate + H+.","definition_xrefs":["RHEA:21508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"retinyl-palmitate esterase activity","secondary_identifiers":["MetaCyc:RETINYL-PALMITATE-ESTERASE-RXN","Reactome:R-HSA-975593","Reactome:R-HSA-975594","Reactome:R-HSA-2404133","Reactome:R-HSA-8848355"],"synonyms":[{"name":"retinyl ester hydrolase activity","type":"related"},{"name":"retinyl palmitate hydrolase activity","type":"related"},{"name":"retinyl palmitate hydrolyase activity","type":"related"},{"name":"retinyl-palmitate palmitohydrolase activity","type":"related"}],"termid":"GO:0050253"}


id: PBO:0074681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 63C","termid":"PBO:0074681"}


id: PBO:0064466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta 3, accessory subunit","termid":"PBO:0064466"}


id: MONDO:0016473
data:
  {"annotated_genes":["SJAG_04755","SJAG_05313","SJAG_04213","SJAG_01111"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87009,87008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012252"},{"annotations":[89184,89185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"}]},"cv_name":"mondo","definition":"A neoplastic syndrome most often caused by mutations in the hSNF5/INI1 tumor suppressor gene. It is characterized by the development of an atypical teratoid/rhabdoid tumor in infancy and early childhood. This highly aggressive tumor develops in the central nervous system as an isolated lesion or in combination with extrarenal or renal rhabdoid tumor. Patients may also develop other central nervous system malignancies including medulloblastoma, supratentorial primitive neuroectodermal tumor, and choroid plexus carcinoma.","definition_xrefs":["NCIT:C93268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhabdoid tumor","termid":"MONDO:0002728"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_04213":null,"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"familial rhabdoid tumor","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:457750","UMLS:C2985524","OMIMPS:609322","Orphanet:231108","GARD:17159"],"synonyms":[{"name":"RTPS","type":"exact"},{"name":"familial posterior fossa brain tumor syndrome of infancy","type":"exact"},{"name":"familial posterior fossa brain tumour syndrome of infancy","type":"exact"},{"name":"familial rhabdoid tumor","type":"exact"},{"name":"hereditary rhabdoid tumor","type":"exact"},{"name":"hereditary rhabdoid tumour","type":"exact"},{"name":"rhabdoid predisposition syndrome","type":"exact"},{"name":"rhabdoid tumor predisposition syndrome","type":"exact"},{"name":"rhabdoid tumour predisposition syndrome","type":"exact"}],"termid":"MONDO:0016473","terms_by_termid":{"MONDO:0012252":null,"MONDO:0013224":null},"xrefs":{"Monarch":{"xref_id":"0016473"}}}


id: MONDO:0008192
data:
  {"annotated_genes":["SJAG_02398"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87669],"is_not":false,"summary":null,"term":"MONDO:0008192"}]},"cv_name":"mondo","definition":"Any paraganglioma in which the cause of the disease is a mutation in the SDHD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraganglioma","termid":"MONDO:0000448"},{"relation_name":"is_a","term_name":"hereditary pheochromocytoma-paraganglioma","termid":"MONDO:0017366"},{"relation_name":"is_a","term_name":"adrenal gland neoplasm","termid":"MONDO:0021227"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02398":null},"genotype_count":0,"is_obsolete":false,"name":"paragangliomas 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:488134","OMIM:168000","GARD:7324","UMLS:C3494181"],"synonyms":[{"name":"PGL1","type":"related"},{"name":"Paragangliomata","type":"related"},{"name":"SDHD paraganglioma","type":"exact"},{"name":"carotid body tumors","type":"related"},{"name":"carotid body tumours","type":"related"},{"name":"chemodectomas","type":"related"},{"name":"glomus jugulare tumors","type":"related"},{"name":"glomus jugulare tumours","type":"related"},{"name":"glomus tumors, familial, 1","type":"related"},{"name":"paraganglioma caused by mutation in SDHD","type":"exact"},{"name":"paraganglioma, carotid body","type":"related"},{"name":"paragangliomas 1","type":"exact"},{"name":"paragangliomas 1, with or without deafness","type":"exact"},{"name":"paragangliomas type 1","type":"exact"},{"name":"paragangliomas with sensorineural hearing loss","type":"related"},{"name":"paragangliomas, familial nonchromaffin, 1","type":"related"},{"name":"paragangliomas, familial, 1","type":"related"}],"termid":"MONDO:0008192","terms_by_termid":{"MONDO:0008192":null},"xrefs":{"Monarch":{"xref_id":"0008192"}}}


id: PBO:0066846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 146","termid":"PBO:0066846"}


id: PBO:0003007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal of transmembrane channel, trunucated","termid":"PBO:0003007"}


id: GO:0030557
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of a posttranscriptional modification in a tRNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["GOC:mah","PMID:12457565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA binding","termid":"GO:0000049"},{"relation_name":"is_a","term_name":"RNA modification guide activity","termid":"GO:0030555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"tRNA modification guide activity","termid":"GO:0030557"}


id: GO:0023002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Migration of the nuclei of the two-nucleate embryo sac to opposite poles of the cell.","definition_xrefs":["GOC:mtg_plant","ISBN:047186840X","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryo sac nuclear migration","termid":"GO:0009562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"nuclear migration to embryo sac poles","synonyms":[{"name":"nuclear migration to female gametophyte poles","type":"exact"},{"name":"nuclear migration to megagametophyte poles","type":"exact"},{"name":"nucleus migration to embryo sac poles","type":"exact"},{"name":"nucleus migration to female gametophyte poles","type":"exact"},{"name":"nucleus migration to megagametophyte poles","type":"exact"}],"termid":"GO:0023002"}


id: PBO:0052396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member C2","termid":"PBO:0052396"}


id: GO:1900202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of spread of virus in host, cell to cell.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of spread of virus in host, cell to cell (obsolete GO:1900202)","synonyms":[{"name":"down regulation of cell to cell spread of virus within host","type":"exact"},{"name":"down regulation of spread of virus in host, cell to cell","type":"exact"},{"name":"down regulation of spread of virus within host, cell to cell","type":"exact"},{"name":"down regulation of viral spread within host, cell to cell","type":"exact"},{"name":"down-regulation of cell to cell spread of virus within host","type":"exact"},{"name":"down-regulation of spread of virus in host, cell to cell","type":"exact"},{"name":"down-regulation of spread of virus within host, cell to cell","type":"exact"},{"name":"down-regulation of viral spread within host, cell to cell","type":"exact"},{"name":"downregulation of cell to cell spread of virus within host","type":"exact"},{"name":"downregulation of spread of virus in host, cell to cell","type":"exact"},{"name":"downregulation of spread of virus within host, cell to cell","type":"exact"},{"name":"downregulation of viral spread within host, cell to cell","type":"exact"},{"name":"inhibition of cell to cell spread of virus within host","type":"exact"},{"name":"inhibition of spread of virus in host, cell to cell","type":"narrow"},{"name":"inhibition of spread of virus within host, cell to cell","type":"exact"},{"name":"inhibition of viral spread within host, cell to cell","type":"exact"},{"name":"negative regulation of cell to cell spread of virus within host","type":"exact"},{"name":"negative regulation of spread of virus in host, cell to cell","type":"exact"},{"name":"negative regulation of spread of virus within host, cell to cell","type":"exact"},{"name":"negative regulation of viral spread within host, cell to cell","type":"exact"}],"termid":"GO:1900202"}


id: PBO:0042288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD2AP divergent transcript","termid":"PBO:0042288"}


id: GO:1903597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gap junction assembly.","definition_xrefs":["GO_REF:0000058","GOC:rl","GOC:TermGenie","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","PMID:25017399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell junction assembly","termid":"GO:1901889"},{"relation_name":"is_a","term_name":"regulation of gap junction assembly","termid":"GO:1903596"},{"relation_name":"negatively_regulates","term_name":"gap junction assembly","termid":"GO:0016264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gap junction assembly","synonyms":[{"name":"down regulation of gap junction assembly","type":"exact"},{"name":"down-regulation of gap junction assembly","type":"exact"},{"name":"downregulation of gap junction assembly","type":"exact"},{"name":"inhibition of gap junction assembly","type":"narrow"}],"termid":"GO:1903597"}


id: MONDO:0006983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon neurovascular condition seen with exertion of the upper extremity. It is usually caused by atherosclerotic stenosis or occlusion of the subclavian artery proximal to the origin of the vertebral artery. In order to maintain adequate perfusion of the arm during exercise on the affected side, the narrowed subclavian artery siphons off retrograde blood flow from the ipsilateral vertebral artery. This is possible due to lower blood pressure distal to the site of narrowing and collateral circulation through the circle of Willis. Affected individuals may remain asymptomatic until the oxygen demand generated from upper extremity exercise requires a large enough compensatory volume of blood to be diverted from the vertebral artery to provoke vertebrobasilar insufficiency and its accompanying neurological sequelae. Presenting clinical signs may include pain or numbness of the affected arm (with diminished pulses and a brachial systolic blood pressure differential of greater than 20 mmHg as compared to the opposite arm), vertigo, tinnitus, dysarthria, diplopia and syncope. Notably, unlike cerebral infarction, the clinical course does not lead to chronic neurologic disability. Prognosis for recovery of normal anterograde circulation is favorable following endovascular or surgical intervention.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subclavian steal syndrome","secondary_identifiers":["MESH:D013349","DOID:13002","ICD9:435.2","NCIT:C35044","MedDRA:10042335","MEDGEN:20983","SCTID:15258001","icd11.foundation:2123391417","UMLS:C0038531"],"synonyms":[{"name":"subclavian artery stenosis","type":"exact"},{"name":"subclavian steal phenomenon","type":"exact"},{"name":"subclavian steal steno-occlusive disease","type":"exact"}],"termid":"MONDO:0006983","xrefs":{"Monarch":{"xref_id":"0006983"}}}


id: PBO:0039464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 13A","termid":"PBO:0039464"}


id: PBO:0056910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mast cell immunoglobulin like receptor 1","termid":"PBO:0056910"}


id: PBO:0062997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl arginine deiminase 3","termid":"PBO:0062997"}


id: GO:0106362
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginyl-[protein] + UDP-N-acetyl-alpha-D-glucosamine = H+ + N(omega)-(N-acetyl-beta-D-glucosaminyl)-L-arginyl-[protein] + UDP.","definition_xrefs":["RHEA:66632","PMID:30619781","PMID:23955153","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein N-acetylglucosaminyltransferase activity","termid":"GO:0016262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"protein-arginine N-acetylglucosaminyltransferase activity","termid":"GO:0106362"}


id: PBO:0052394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family binding protein","termid":"PBO:0052394"}


id: GO:0090248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled self-propelled movement of a cell that contributes to somitogenic axis elongation.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"axis elongation involved in somitogenesis","termid":"GO:0090245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in somitogenic axis elongation","secondary_identifiers":["GO:0090247"],"synonyms":[{"name":"cell motility involved in somitogenic axis elongation","type":"broad"}],"termid":"GO:0090248"}


id: PBO:0028098
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_index","termid":"PBO:0028098"}


id: PBO:0030764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_copper_ion","termid":"PBO:0030764"}


id: PBO:0069218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 473, pseudogene","termid":"PBO:0069218"}


id: PBO:0081016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB47 and NKTR antisense RNA 1","termid":"PBO:0081016"}


id: PBO:0054236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1618","termid":"PBO:0054236"}


id: PBO:0083577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps YFR035C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083577"}


id: PBO:0055973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and IQ motif containing 3","termid":"PBO:0055973"}


id: MONDO:0009739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete infantile neuroaxonal dystrophy (obsolete MONDO:0009739)","secondary_identifiers":["NANDO:2200887"],"termid":"MONDO:0009739","xrefs":{"Monarch":{"xref_id":"0009739"}}}


id: PBO:0060822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NECAP endocytosis associated 2","termid":"PBO:0060822"}


id: PR:O94546
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug150 gene.","definition_xrefs":["UniProtKB:O94546","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 150 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.07c","synonyms":[{"name":"Spom972h-mug150","type":"exact"}],"termid":"PR:O94546"}


id: PBO:0054425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1821","termid":"PBO:0054425"}


id: FYPO:0001612
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-arginine measured in the vacuole is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in vacuole","termid":"FYPO:0001602"},{"relation_name":"is_a","term_name":"decreased cellular arginine level","termid":"FYPO:0001621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased vacuolar arginine level","synonyms":[{"name":"decreased level of arginine in vacuole","type":"exact"},{"name":"decreased vacuolar L-arginine level","type":"exact"},{"name":"decreased vacuolar arginine level during mitotic cell cycle","type":"related"},{"name":"decreased vacuolar arginine level during vegetative growth","type":"exact"},{"name":"reduced level of arginine in vacuole","type":"exact"},{"name":"reduced vacuolar arginine level","type":"exact"}],"termid":"FYPO:0001612"}


id: PBO:0048783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNA13 pseudogene 1","termid":"PBO:0048783"}


id: GO:0017151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DEAD/H-box RNA helicase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"DEAD/H-box RNA helicase binding","termid":"GO:0017151"}


id: PBO:0016562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein Nap2","termid":"PBO:0016562"}


id: PATO:0001838
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A flow that is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"fluid flow rate","termid":"PATO:0002243"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased fluid flow","synonyms":[{"name":"low flow","type":"exact"}],"termid":"PATO:0001838"}


id: PBO:0044067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin 11","termid":"PBO:0044067"}


id: PBO:0054219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1600","termid":"PBO:0054219"}


id: SO:0002165
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short tandem repeat expansion with an increase in a sequence of three nucleotide units repeated in tandem compared to a reference sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"short_tandem_repeat_expansion","termid":"SO:0002162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide_repeat_expansion","synonyms":[{"name":"trinucleotide repeat expansion","type":"exact"}],"termid":"SO:0002165"}


id: MONDO:0004865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A acute transudative otitis media involving thick, viscid and mucuslike fluid effusion due to which the drum appears blue in color.","definition_xrefs":["DOID:9736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute transudative otitis media","termid":"MONDO:0002738"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blue drum syndrome","secondary_identifiers":["MEDGEN:583099","SCTID:52353000","UMLS:C0395863","ICD9:381.02"],"synonyms":[{"name":"acute mucoid otitis media","type":"exact"},{"name":"acute non-suppurative otitis media - mucoid","type":"related"},{"name":"blue drum syndrome","type":"exact"}],"termid":"MONDO:0004865","xrefs":{"Monarch":{"xref_id":"0004865"}}}


id: GO:0019286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycine betaine from other compounds, including glycine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine metabolic process","termid":"GO:0006544"},{"relation_name":"is_a","term_name":"glycine betaine biosynthetic process","termid":"GO:0031456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"glycine betaine biosynthetic process from glycine","secondary_identifiers":["MetaCyc:P541-PWY"],"synonyms":[{"name":"N-trimethylglycine biosynthesis from glycine","type":"exact"},{"name":"N-trimethylglycine biosynthetic process from glycine","type":"exact"},{"name":"glycine betaine anabolism from glycine","type":"exact"},{"name":"glycine betaine formation from glycine","type":"exact"},{"name":"glycine betaine synthesis from glycine","type":"exact"}],"termid":"GO:0019286"}


id: PBO:0087054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L26A; binds to 5.8S rRNA; non-essential even when paralog is also deleted; deletion has minimal affections on ribosome biosynthesis; homologous to mammalian ribosomal protein L26 and bacterial L24; RPL26A has a paralog, RPL26B, that arose from the whole genome duplication","termid":"PBO:0087054"}


id: MONDO:0023833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multifocal choroiditis (MFC) is an inflammatory disorder characterized by swelling of the eye (called uveitis) and multiple lesions in the choroid, a layer of blood vessels between the white of the eye and the retina. Symptoms include blurry vision, floaters, sensitivity to light, blind spots and mild eye discomfort. Though the cause is unknown, multifocal choroiditis is seen most frequently in women ages 20 to 60, and usually affects both eyes. MFC is generally treated with steroid medication that can be taken orally or injected into the eye. Multifocal choroiditis is a chronic condition, thus symptoms may return or worsen even after successful treatment.","definition_xrefs":["GARD:0009824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choroiditis","termid":"MONDO:0001280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"multifocal choroiditis","secondary_identifiers":["MEDGEN:288551","GARD:9824","SCTID:414783007","icd11.foundation:1197219411","MESH:C537374","UMLS:C1533060","MESH:D000080364"],"termid":"MONDO:0023833","xrefs":{"Monarch":{"xref_id":"0023833"}}}


id: PBO:0047949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, distamycin A type, rare, fra(17)(p12)","termid":"PBO:0047949"}


id: GO:0097510
data:
  {"annotated_genes":["SJAG_02528"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80074],"is_not":false,"summary":null,"term":"GO:0097510"}]},"cv_name":"biological_process","definition":"A base-excision repair, AP site formation process occurring via excision of a deaminated base.","definition_xrefs":["GOC:al","PMID:18789404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base-excision repair, AP site formation","termid":"GO:0006285"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"base-excision repair, AP site formation via deaminated base removal","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0097510","terms_by_termid":{"GO:0097510":null}}


id: GO:0051286
data:
  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id: MONDO:0015118
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id: GO:1990715
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id: PBO:0116749
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id: PBO:0060019
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id: FYPO:0002435
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id: PBO:0068784
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id: MOD:01697
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id: PBO:0078664
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id: MONDO:1010759
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id: _global:directly_negatively_regulated_by
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  {"annotation_feature_type":"gene","cv_name":"external","definition":"Process(P2) is directly negatively regulated by process(P1) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2).  For example, if protein A has protein binding activity(P1) that targets protein B and this binding  negatively regulates the kinase activity (P2) of protein B then P2 directly negatively regulated by P1.","direct_ancestors":[{"relation_name":"is_a","term_name":"directly_regulated_by","termid":"_global:directly_regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_negatively_regulated_by","secondary_identifiers":["RO:0002023"],"termid":"_global:directly_negatively_regulated_by"}


id: MONDO:0004224
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id: GO:1903576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-arginine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:mr","GOC:TermGenie","PMID:6394628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-arginine","termid":"GO:1903576"}


id: FYPO:0000678
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosomes are not segregated equally to the two spindle poles in the first meiotic nuclear division. For example, both homologs of one or more chromosomes may be segregated to the same spindle pole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unequal meiotic chromosome segregation","termid":"FYPO:0000925"},{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"unequal homologous chromosome segregation","synonyms":[{"name":"aneuploidy","type":"related"},{"name":"chromosome non-disjunction at meiosis I","type":"related"},{"name":"chromosome nondisjunction at meiosis I","type":"related"},{"name":"chromosome nondisjunction during meiosis I","type":"related"},{"name":"impaired disjunction of homologous chromosomes","type":"exact"},{"name":"impaired homologous chromosome disjunction","type":"exact"},{"name":"meiosis I nondisjunction","type":"related"},{"name":"unequal chromosome disjunction during meiosis I","type":"exact"},{"name":"unequal homologous chromosome disjunction","type":"exact"}],"termid":"FYPO:0000678"}


id: GO:0008910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + kanamycin = ADP + 2 H+ + kanamycin 3'-phosphate.","definition_xrefs":["EC:2.7.1.95","RHEA:24256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside phosphotransferase activity","termid":"GO:0034071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"kanamycin kinase activity","secondary_identifiers":["KEGG_REACTION:R01888","MetaCyc:KANAMYCIN-KINASE-RXN"],"synonyms":[{"name":"APH(3') activity","type":"broad"},{"name":"ATP:kanamycin 3'-O-phosphotransferase activity","type":"related"},{"name":"aminoglycoside 3'-phosphotransferase activity","type":"broad"},{"name":"kanamycin kinase (phosphorylating)","type":"related"},{"name":"neomycin phosphotransferase activity","type":"related"},{"name":"neomycin-kanamycin phosphotransferase activity","type":"related"}],"termid":"GO:0008910"}


id: PBO:0002720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin Spn1","termid":"PBO:0002720"}


id: PBO:0036230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase, pseudogene (4 frameshifts)","termid":"PBO:0036230"}


id: PBO:0063274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma cluster","termid":"PBO:0063274"}


id: GO:0003811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any of a set of activities involved in the complement cascade.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete complement activity (obsolete GO:0003811)","synonyms":[{"name":"complement activity","type":"exact"}],"termid":"GO:0003811"}


id: PBO:0003592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps68 (predicted)","termid":"PBO:0003592"}


id: PBO:0030894
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleus_localization_during_vegetative_growth","termid":"PBO:0030894"}


id: GO:1902989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any telomere maintenance via semi-conservative replication that is involved in meiotic cell cycle.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance via semi-conservative replication","termid":"GO:0032201"},{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0032200","GO:0006259","GO:0007049"],"is_obsolete":false,"name":"meiotic telomere maintenance via semi-conservative replication","synonyms":[{"name":"equal telomere replication involved in meiotic cell cycle","type":"related"},{"name":"telomeric fork progression involved in meiotic cell cycle","type":"narrow"},{"name":"telomeric replication fork progression involved in meiotic cell cycle","type":"narrow"}],"termid":"GO:1902989"}


id: PBO:0030387
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cortex_morphology_during_nitrogen_starvation","termid":"PBO:0030387"}


id: PBO:0065595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 11","termid":"PBO:0065595"}


id: PBO:0044357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 44","termid":"PBO:0044357"}


id: MONDO:0015675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distomatosis is a group of parasitoses caused by flat worms that live in contact with epitheliums. Clinical classification depends on the organ infected by the adult parasite: liver, lungs, or intestines.","definition_xrefs":["Orphanet:1685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic infectious disease","termid":"MONDO:0005135"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distomatosis","secondary_identifiers":["GARD:1891","SCTID:26089000","MEDGEN:21251","ICD9:121.9","ICD9:121.8","UMLS:C0040820"],"synonyms":[{"name":"distomiasis","type":"exact"},{"name":"fluke infection","type":"exact"}],"termid":"MONDO:0015675","xrefs":{"Monarch":{"xref_id":"0015675"}}}


id: GO:0061158
data:
  {"annotated_genes":["SJAG_04825"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120344],"is_not":false,"summary":null,"term":"GO:0061158"}]},"cv_name":"biological_process","definition":"An mRNA destabilization process in which one or more RNA-binding proteins associate with the 3'-untranslated region (UTR) of an mRNA.","definition_xrefs":["GOC:jh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA destabilization","termid":"GO:0061157"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04825":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"3'-UTR-mediated mRNA destabilization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061158","terms_by_termid":{"GO:0061158":null}}


id: PBO:0046999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A2, pseudogene","termid":"PBO:0046999"}


id: GO:0160048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of fusing together the edges of a craniofacial suture.","definition_xrefs":["PMID:33842480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone morphogenesis","termid":"GO:0060349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"craniofacial suture closure","termid":"GO:0160048"}


id: FYPO:0002643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing clotrimazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002058","FYPO:0000003","FYPO:0000139","FYPO:0002060","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on clotrimazole","synonyms":[{"name":"normal cell population growth in presence of clotrimazole","type":"exact"},{"name":"normal cell population growth on clotrimazole","type":"exact"},{"name":"normal cellular response to clotrimazole","type":"related"},{"name":"normal vegetative cell population growth on clotrimazole","type":"exact"}],"termid":"FYPO:0002643"}


id: PBO:0049825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparin binding growth factor","termid":"PBO:0049825"}


id: GO:0044592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of pullulan stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:tt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to pullulan","termid":"GO:0044592"}


id: PBO:0077730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide repeat containing 18 pseudogene 2","termid":"PBO:0077730"}


id: MONDO:0014853
data:
  {"annotated_genes":["SJAG_02348"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87458],"is_not":false,"summary":null,"term":"MONDO:0014853"}]},"cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the MCM2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02348":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 70","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:934742","OMIM:616968","UMLS:C4310775","GARD:18145","DOID:0110592"],"synonyms":[{"name":"DFNA70","type":"narrow"},{"name":"MCM2 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 70","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 70","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in MCM2","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 70","type":"narrow"},{"name":"autosomal dominant nonsyndromic hearing loss 70","type":"exact"},{"name":"deafness, autosomal dominant 70","type":"narrow"},{"name":"deafness, autosomal dominant type 70","type":"narrow"}],"termid":"MONDO:0014853","terms_by_termid":{"MONDO:0014853":null},"xrefs":{"Monarch":{"xref_id":"0014853"}}}


id: GO:0016229
data:
  {"annotated_genes":["SJAG_02291","SJAG_01326","SJAG_02855","SJAG_04124","SJAG_03235"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103742,119550],"is_not":false,"summary":null,"term":"GO:0016229"},{"annotations":[72679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000253"},{"annotations":[112062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000252"},{"annotations":[63206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003865"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which one substrate is a sterol derivative.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01326":null,"SJAG_02291":null,"SJAG_02855":null,"SJAG_03235":null,"SJAG_04124":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"steroid dehydrogenase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0016229","terms_by_termid":{"GO:0000252":null,"GO:0000253":null,"GO:0003865":null,"GO:0016229":null}}


id: PBO:0066408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing","termid":"PBO:0066408"}


id: MONDO:0003288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of leiomyoma characterized by the presence of pleomorphic muscle cells with bizarre hyperchromatic nuclei and eosinophilic cytoplasm.","definition_xrefs":["NCIT:C4257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bizarre leiomyoma","secondary_identifiers":["UMLS:C0334478","ICDO:8893/0","DOID:5127","MEDGEN:90789"],"synonyms":[{"name":"Symplastic leiomyoma","type":"exact"},{"name":"atypical leiomyoma","type":"exact"},{"name":"bizarre leiomyoma","type":"exact"},{"name":"pleomorphic leiomyoma","type":"exact"}],"termid":"MONDO:0003288","xrefs":{"Monarch":{"xref_id":"0003288"}}}


id: MONDO:0011643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete permanent neonatal diabetes mellitus (obsolete MONDO:0011643)","termid":"MONDO:0011643","xrefs":{"Monarch":{"xref_id":"0011643"}}}


id: PBO:0067474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 605, pseudogene","termid":"PBO:0067474"}


id: PBO:0039952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C","termid":"PBO:0039952"}


id: MONDO:0015155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spotted fever rickettsiosis (obsolete MONDO:0015155)","termid":"MONDO:0015155","xrefs":{"Monarch":{"xref_id":"0015155"}}}


id: GO:0008441
data:
  {"annotated_genes":["SJAG_01702"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80570],"is_not":false,"summary":null,"term":"GO:0008441"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine 3',5'-bisphosphate + H2O = adenosine 5'-phosphate + phosphate.","definition_xrefs":["EC:3.1.3.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidase activity","termid":"GO:0008252"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"3'(2'),5'-bisphosphate nucleotidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:10040","Reactome:R-HSA-176606","Reactome:R-HSA-8953499","MetaCyc:325-BISPHOSPHATE-NUCLEOTIDASE-RXN"],"synonyms":[{"name":"3'(2'),5' bisphosphate nucleotidase activity","type":"exact"},{"name":"3'(2'),5'-bisphosphonucleoside 3'(2')-phosphohydrolase activity","type":"related"},{"name":"3'-phosphoadenylylsulfate 3'-phosphatase activity","type":"related"},{"name":"DPNPase activity","type":"related"},{"name":"adenosine-3'(2'),5'-bisphosphate 3'(2')-phosphohydrolase activity","type":"related"},{"name":"phosphoadenylate 3'-nucleotidase activity","type":"related"}],"termid":"GO:0008441","terms_by_termid":{"GO:0008441":null}}


id: MONDO:1012041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar abiotrophy, non-human animal","termid":"MONDO:1011834"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar abiotrophy, cattle","secondary_identifiers":["OMIA:000175-9913"],"termid":"MONDO:1012041","xrefs":{"Monarch":{"xref_id":"1012041"}}}


id: PATO:0002279
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being strongly articulated with another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"articulated with","termid":"PATO:0002278"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tightly articulated with","termid":"PATO:0002279"}


id: GO:0062223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the rate, frequency or extent of somatic muscle development.","definition_xrefs":["PMID:16643882","PMID:25758712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"somatic muscle development","termid":"GO:0007525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of somatic muscle development","termid":"GO:0062223"}


id: GO:0047341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-L-fucose 1-phosphate + GTP + H+ = diphosphate + GDP-beta-L-fucose.","definition_xrefs":["RHEA:13549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"fucose-1-phosphate guanylyltransferase activity","secondary_identifiers":["Reactome:R-HSA-6787533","KEGG_REACTION:R01951","MetaCyc:2.7.7.30-RXN","EC:2.7.7.30"],"synonyms":[{"name":"GDP fucose pyrophosphorylase activity","type":"related"},{"name":"GDP-L-fucose pyrophosphorylase activity","type":"related"},{"name":"GDP-fucose diphosphorylase activity","type":"related"},{"name":"GDP-fucose pyrophosphorylase activity","type":"related"},{"name":"GTP:L-fucose-1-phosphate guanylyltransferase activity","type":"related"},{"name":"GTP:beta-L-fucose-1-phosphate guanylyltransferase activity","type":"related"},{"name":"GTP:fucose-1-phosphate guanylyltransferase activity","type":"exact"},{"name":"guanosine diphosphate L-fucose pyrophosphorylase activity","type":"related"}],"termid":"GO:0047341"}


id: PBO:0053803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1060","termid":"PBO:0053803"}


id: GO:1905317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which an inferior endocardial cushion is generated and organized.","definition_xrefs":["GOC:BHF","PMID:17050629","GOC:TermGenie","GOC:rl","GO_REF:0000083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardial cushion morphogenesis","termid":"GO:0003203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior endocardial cushion morphogenesis","synonyms":[{"name":"ventral endocardial cushion morphogenesis","type":"exact"}],"termid":"GO:1905317"}


id: MONDO:0044255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Multiple genes influence normal human skin, hair, and/or eye pigmentation. Pigmentation phenotypes influenced by variation in the OCA2 gene are termed SHEP1. The SHEP2 association (OMIM:266300) is determined by variation at the MC1R locus (OMIM:155555) and describes a phenotype predominantly characterized by red hair and fair skin. SHEP3 (OMIM:601800) encompasses pigment variation influenced by the TYR gene (OMIM:606933); SHEP4 (OMIM:113750), that influenced by the SLC24A5 gene (OMIM:609802). Variation in the SLC45A2 (OMIM:606202) and SLC24A4 (OMIM:609840) genes result in the phenotypic associations SHEP5 (OMIM:227240) and SHEP6 (OMIM:210750), respectively. Sequence variation thought to affect expression of KITLG (OMIM:184745) results in the SHEP7 (OMIM:611664) phenotypic association. SHEP8 (OMIM:611724) is associated with variation in the IRF4 gene (OMIM:601900). Polymorphism in the 3-prime untranslated region of the ASIP gene (OMIM:600201) influences the SHEP9 association (OMIM:611742). The SHEP10 association (OMIM:612267) comprises variation in the TPCN2 gene (OMIM:612163), and SHEP11 (OMIM:612271) is associated with polymorphism near the TYRP1 gene (OMIM:115501).","definition_xrefs":["OMIM:227220"],"gene_count":0,"genotype_count":0,"name":"obsolete skin/hair/eye pigmentation, variation in, 1 (obsolete MONDO:0044255)","synonyms":[{"name":"Brown eye color 2","type":"related"},{"name":"SHEP1","type":"related"},{"name":"eye color 3","type":"related"},{"name":"eye color, Brown/blue","type":"related"},{"name":"eye color, blue/Nonblue","type":"related"},{"name":"hair color 3","type":"related"},{"name":"skin/hair/eye pigmentation 1, Blond/Brown hair","type":"related"},{"name":"skin/hair/eye pigmentation 1, blond/brown hair","type":"exact"},{"name":"skin/hair/eye pigmentation 1, blue/Brown eyes","type":"related"},{"name":"skin/hair/eye pigmentation 1, blue/Nonblue eyes","type":"related"},{"name":"skin/hair/eye pigmentation 1, blue/nonblue eyes","type":"exact"},{"name":"skin/hair/eye pigmentation, variation IN, 1","type":"related"}],"termid":"MONDO:0044255","xrefs":{"Monarch":{"xref_id":"0044255"}}}


id: PBO:0061316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member A1","termid":"PBO:0061316"}


id: FYPO:0006024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more actin filaments is normal (i.e. indistinguishable from wild type). The relevant actin-binding protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex binding","termid":"FYPO:0005232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal actin filament binding","synonyms":[{"name":"normal F-actin binding","type":"exact"},{"name":"normal filamentous actin binding","type":"exact"}],"termid":"FYPO:0006024"}


id: PBO:0001229
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.5.1","termid":"PBO:0001229"}


id: PBO:0016102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate 1-dehydrogenase Zwf2 (predicted)","termid":"PBO:0016102"}


id: PBO:0080390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 25 homolog","termid":"PBO:0080390"}


id: FYPO:0004486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the deacetylation of one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abnormal protein deacetylation during vegetative growth","termid":"FYPO:0004485"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"abolished protein deacetylation during vegetative growth","synonyms":[{"name":"abolished protein deacetylation during mitotic cell cycle","type":"related"},{"name":"protein deacetylation abolished during vegetative growth","type":"exact"},{"name":"protein deacetylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0004486"}


id: PBO:0084665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial acetyl-coenzyme A carboxylase; catalyzes production of malonyl-CoA in mitochondrial fatty acid biosynthesis; relocalizes from mitochondrion to cytoplasm upon DNA replication stress; genetic and comparative analysis suggests that translation begins at a non-canonical (Ile) start codon at -372 relative to the annotated start codon","termid":"PBO:0084665"}


id: SO:0002252
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"CDS region corresponding to a transit peptide region of a polypeptide.","direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_region","termid":"SO:0000851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transit_peptide_region_of_CDS","synonyms":[{"name":"INSDC_feature:transit_peptide","type":"exact"},{"name":"transit peptide region of CDS","type":"exact"}],"termid":"SO:0002252"}


id: GO:0046447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving terpenoid indole alkaloids, compounds formed from the condensation of tryptamine (derived from tryptophan) and secologanin (derived from geranyl pyrophosphate).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole alkaloid metabolic process","termid":"GO:0035834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"terpenoid indole alkaloid metabolic process","synonyms":[{"name":"terpenoid indole alkaloid metabolism","type":"exact"}],"termid":"GO:0046447"}


id: MONDO:1011317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Endocrine system disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317","xrefs":{"Monarch":{"xref_id":"1011317"}}}


id: MONDO:0001561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing of the pyloric lumen caused either by hypertrophy of the surrounding muscles or tissue scarring due to a chronic peptic ulcer.","definition_xrefs":["NCIT:C34966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pyloric stenosis","secondary_identifiers":["EFO:0009626","DOID:3122","MedDRA:10062499","UMLS:C0034194","MEDGEN:18780","MESH:D011707","DOID:12639","HP:0002021","MESH:D017219","SCTID:367403001"],"synonyms":[{"name":"GOO","type":"exact"},{"name":"gastric outflow obstruction","type":"exact"},{"name":"gastric outlet obstruction","type":"exact"},{"name":"pyloric stenosis","type":"exact"},{"name":"pyloric stenosis (disease)","type":"exact"}],"termid":"MONDO:0001561","xrefs":{"Monarch":{"xref_id":"0001561"}}}


id: GO:0022829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of propanediol through a large pore, un-gated channel. Examples include gap junctions, which transport substances from one cell to another; and porins which transport substances in and out of bacteria, mitochondria and chloroplasts.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"wide pore channel activity","synonyms":[{"name":"gap junction activity","type":"narrow"},{"name":"non-gated, wide pore channel activity","type":"exact"}],"termid":"GO:0022829"}


id: PBO:0085370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphotyrosine-specific protein phosphatase; dephosphorylates a broad range of substrates in vivo, including Fpr3p; localized to the cytoplasm and the mitochondria; proposed to be a negative regulator of filamentation","termid":"PBO:0085370"}


id: PBO:0029112
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_cell_cycle_process","termid":"PBO:0029112"}


id: MONDO:0002056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign tumor of the breast characterized by the presence of stromal and epithelial elements. It presents as a painless, solitary, slow growing, firm, and mobile mass. It is the most common benign breast lesion. It usually occurs in women of childbearing age. The majority of fibroadenomas do not recur after complete excision. A slightly increased risk of developing cancer within fibroadenomas or in the breast tissue of patients previously treated for fibroadenomas has been reported.","definition_xrefs":["NCIT:C3744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast benign neoplasm","termid":"MONDO:0000620"},{"relation_name":"is_a","term_name":"breast fibroepithelial neoplasm","termid":"MONDO:0021046"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast fibroadenoma","secondary_identifiers":["ICDO:9010/0","MEDGEN:64231","MESH:D018226","SCTID:254847007","UMLS:C0178421","ONCOTREE:FA","DOID:1618"],"synonyms":[{"name":"Complex fibroadenoma of breast","type":"exact"},{"name":"FA","type":"related"},{"name":"breast fibroadenoma","type":"exact"},{"name":"cellular fibroadenoma","type":"exact"},{"name":"fibroadenoma","type":"exact"},{"name":"fibroadenoma of breast","type":"exact"},{"name":"fibroadenoma of the breast","type":"exact"},{"name":"fibroadenoma, benign","type":"exact"},{"name":"juvenile fibroadenoma","type":"exact"},{"name":"juvenile fibroadenoma (morphologic abnormality)","type":"exact"},{"name":"juvenile fibroadenoma of breast","type":"exact"}],"termid":"MONDO:0002056","xrefs":{"Monarch":{"xref_id":"0002056"}}}


id: PBO:0073511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2 domain containing 4B","termid":"PBO:0073511"}


id: PBO:0036183
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_methylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036183"}


id: FYPO:0007307
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 acetylation at centromere during vegetative growth","termid":"FYPO:0000893"},{"relation_name":"is_a","term_name":"increased histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0005310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K14 acetylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3K14 acetylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K14 acetylation at centromere during mitotic cell cycle","type":"related"},{"name":"increased histone H3K14 acetylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0007307"}


id: MONDO:0000106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete apnea (obsolete MONDO:0000106)","synonyms":[{"name":"apnea","type":"exact"},{"name":"obsolete apnea (disease)","type":"exact"}],"termid":"MONDO:0000106","xrefs":{"Monarch":{"xref_id":"0000106"}}}


id: RO:0002234
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p has output c iff c is a participant in p, c is present at the end of p, and c is not present at the beginning of p.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_output","termid":"RO:0002234"}


id: PBO:0059959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 4","termid":"PBO:0059959"}


id: MONDO:0002176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A malignant neoplasm involving the connective tissue","gene_count":0,"genotype_count":0,"name":"obsolete connective tissue cancer (obsolete MONDO:0002176)","secondary_identifiers":["SCTID:126598008","DOID:201","MESH:D009372"],"synonyms":[{"name":"cancer of connective tissue","type":"exact"},{"name":"connective tissue cancer","type":"exact"},{"name":"connective tissue neoplasm","type":"broad"},{"name":"malignant connective tissue neoplasm","type":"exact"},{"name":"malignant neoplasm of connective tissue","type":"exact"},{"name":"neoplasm of connective tissues","type":"broad"}],"termid":"MONDO:0002176","xrefs":{"Monarch":{"xref_id":"0002176"}}}


id: GO:0009502
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A series of membrane-linked oxidation-reduction reactions in which electrons are transferred from an initial electron donor through a series of intermediates to a final electron acceptor (usually oxygen).","definition_xrefs":["ISBN:0140514031","GOC:mtg_electron_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete photosynthetic electron transport chain (obsolete GO:0009502)","synonyms":[{"name":"photosynthetic electron transport chain","type":"exact"}],"termid":"GO:0009502"}


id: FYPO:0001280
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to oxidative stress is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to oxidative stress","synonyms":[{"name":"decreased RNA accumulation during cellular response to oxidative stress","type":"related"},{"name":"decreased RNA level during cellular response to DEM","type":"narrow"},{"name":"decreased RNA level during cellular response to diethyl maleate","type":"narrow"},{"name":"decreased RNA level during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"decreased RNA level during oxidative stress response","type":"exact"},{"name":"decreased mRNA level during cellular response to oxidative stress","type":"narrow"},{"name":"decreased transcript level during cellular response to oxidative stress","type":"exact"},{"name":"reduced RNA level during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0001280"}


id: SO:0001204
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region (DNA) to which Bacteriophage RNA polymerase binds, to begin transcription.","definition_xrefs":["xenbase:jb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral_promoter","termid":"SO:0002311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phage_RNA_Polymerase_Promoter","synonyms":[{"name":"Phage RNA Polymerase Promoter","type":"exact"}],"termid":"SO:0001204"}


id: PBO:0005139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XP-C family","termid":"PBO:0005139"}


id: PBO:0076475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAO kinase 3","termid":"PBO:0076475"}


id: GO:2000949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of xyloglucan metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of xyloglucan metabolic process","termid":"GO:2000948"},{"relation_name":"negatively_regulates","term_name":"xyloglucan metabolic process","termid":"GO:0010411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of xyloglucan metabolic process","synonyms":[{"name":"negative regulation of xyloglucan metabolism","type":"exact"}],"termid":"GO:2000949"}


id: MONDO:0007467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA, low-repetitive sequences of","secondary_identifiers":["OMIM:126390","UMLS:C1852041","MEDGEN:342148"],"synonyms":[{"name":"DNA, low-repetitive sequences of","type":"exact"},{"name":"repetitive sequence DNA","type":"related"}],"termid":"MONDO:0007467","xrefs":{"Monarch":{"xref_id":"0007467"}}}


id: PBO:0078462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyrotropin releasing hormone","termid":"PBO:0078462"}


id: MONDO:0015146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly spectrum disorders","termid":"MONDO:0018838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"classic lissencephaly","secondary_identifiers":["UMLS:C0431375","Orphanet:102009","icd11.foundation:570001324","MEDGEN:98463","NANDO:1201069","GARD:5049","NANDO:1201068"],"synonyms":[{"name":"ILS","type":"related"},{"name":"lissencephaly classic","type":"related"},{"name":"lissencephaly sequence isolated","type":"related"},{"name":"lissencephaly type 1","type":"exact"}],"termid":"MONDO:0015146","xrefs":{"Monarch":{"xref_id":"0015146"}}}


id: PR:O14046
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A V-type proton ATPase 21 kDa proteolipid subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10263:SF1","OMA:SCHPO01776","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase 20 kDa proteolipid subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.13","secondary_identifiers":["UniProtKB:O14046"],"synonyms":[{"name":"vacuolar proton pump 20 kDa proteolipid subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ATP6V0B","type":"exact"},{"name":"V-ATPase 20 kDa proteolipid subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14046"}


id: GO:0098572
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the plastid thylakoid membrane that faces the stroma, and any proteins embedded in it or loosely bound to its surface.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"side of membrane","termid":"GO:0098552"},{"relation_name":"part_of","term_name":"plastid thylakoid membrane","termid":"GO:0055035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"stromal side of plastid thylakoid membrane","termid":"GO:0098572"}


id: PBO:0069144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 395, pseudogene","termid":"PBO:0069144"}


id: PBO:0077167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tousled like kinase 1","termid":"PBO:0077167"}


id: GO:0003271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened contributing to the modulation of the frequency, rate or extent of cardioblast proliferation in the secondary heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway involved in heart development","termid":"GO:0061311"},{"relation_name":"part_of","term_name":"regulation of secondary heart field cardioblast proliferation","termid":"GO:0003266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"smoothened signaling pathway involved in regulation of secondary heart field cardioblast proliferation","synonyms":[{"name":"hedgehog signaling pathway involved in regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"hh signaling pathway involved in regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"smoothened receptor signaling pathway involved in regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"smoothened receptor signaling pathway involved in regulation of secondary heart field cardioblast proliferation","type":"exact"},{"name":"smoothened receptor signalling pathway involved in regulation of secondary heart field cardioblast proliferation","type":"exact"}],"termid":"GO:0003271"}


id: PBO:0065125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase D3","termid":"PBO:0065125"}


id: PBO:0039614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A2 pseudogene 1","termid":"PBO:0039614"}


id: GO:1905502
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to acetyl-CoA, an acyl-CoA having acetyl as its S-acetyl component.","definition_xrefs":["GOC:bc","GOC:PARL","GO_REF:0000067","PMID:24927529","GOC:krc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA binding","termid":"GO:0120227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"acetyl-CoA binding","synonyms":[{"name":"acetyl-coenzyme A binding","type":"exact"}],"termid":"GO:1905502"}


id: GO:0061138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a branched epithelium are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of a branching structure","termid":"GO:0001763"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of a branching epithelium","termid":"GO:0061138"}


id: GO:0009138
data:
  {"annotated_genes":["SJAG_03676","SJAG_04665","SJAG_04657","SJAG_00779","SJAG_00885","SJAG_02874"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[94318,109212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046704"},{"annotations":[97390,109213,94319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[72795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[72794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[82209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[78225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrimidine nucleoside diphosphate, a compound consisting of a pyrimidine base linked to a ribose or deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate metabolic process","termid":"GO:0009132"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_00885":null,"SJAG_02874":null,"SJAG_03676":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyrimidine nucleoside diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine nucleoside diphosphate metabolism","type":"exact"}],"termid":"GO:0009138","terms_by_termid":{"GO:0006225":null,"GO:0006227":null,"GO:0006233":null,"GO:0006240":null,"GO:0006256":null,"GO:0046704":null,"GO:0046705":null}}


id: PBO:0054368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1762","termid":"PBO:0054368"}


id: PBO:0068638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 18, pseudogene","termid":"PBO:0068638"}


id: PBO:0056034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukotriene B4 receptor","termid":"PBO:0056034"}


id: SO:0000729
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute of protein-coding genes where the initial protein product contains an intein.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_coding","termid":"SO:0000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intein_containing","synonyms":[{"name":"intein containing","type":"exact"}],"termid":"SO:0000729"}


id: PBO:0030223
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_spindle_pole_body","termid":"PBO:0030223"}


id: GO:0052781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any chitobiose, a family of compounds derived from chitin and based on the structure of D-glucosaminyl-(1->4)-D-glucosamine.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitobiose metabolic process","termid":"GO:0052780"},{"relation_name":"is_a","term_name":"amino disaccharide catabolic process","termid":"GO:0052782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitobiose catabolic process","termid":"GO:0052781"}


id: SO:0000173
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved GC-rich region located upstream of the start point of eukaryotic transcription units which may occur in multiple copies or in either orientation; consensus=GGGCGG.","direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"},{"relation_name":"part_of","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GC_rich_promoter_region","synonyms":[{"name":"GC rich promoter region","type":"exact"},{"name":"GC-rich region","type":"exact"},{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:GC_rich_promoter_region","type":"exact"}],"termid":"SO:0000173"}


id: FYPO:0005417
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic spindle elongation begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle elongation","termid":"FYPO:0000131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000337","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0000054"],"is_obsolete":false,"name":"premature mitotic spindle elongation","synonyms":[{"name":"advanced mitotic spindle elongation","type":"exact"},{"name":"premature mitotic sister chromatid separation during vegetative growth","type":"related"},{"name":"premature spindle elongation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005417"}


id: PBO:0011154
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Metachromatic leukodystrophy","termid":"PBO:0011154"}


id: MONDO:1012202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteodystrophy, non-human animal","termid":"MONDO:1011951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteodystrophy, dog","secondary_identifiers":["OMIA:000753-9615"],"termid":"MONDO:1012202","xrefs":{"Monarch":{"xref_id":"1012202"}}}


id: PBO:0062279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily H member 15","termid":"PBO:0062279"}


id: GO:0034930
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-hydroxypyrene + XSO3- = 1-pyrenylsulfate + HX.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-hydroxypyrene sulfotransferase activity (obsolete GO:0034930)","termid":"GO:0034930"}


id: PBO:0027039
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_mitotically_up-regulated_gene_mRNA_during_vegetative_growth","termid":"PBO:0027039"}


id: PR:Q9C108
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB1E7.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB1E7.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.01c","synonyms":[{"name":"Spom972h-SPAPB1E7.01c","type":"exact"}],"termid":"PR:Q9C108"}


id: MONDO:0018828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudo-TORCH syndrome","termid":"MONDO:0009626"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"type 1 interferonopathy of childhood","termid":"MONDO:0957408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"pseudo-TORCH syndrome 2","secondary_identifiers":["UMLS:C4479376","MEDGEN:1373355","GARD:17875","OMIM:617397","Orphanet:481665"],"synonyms":[{"name":"PTORCH2","type":"related"},{"name":"USP18 deficiency","type":"related"},{"name":"pseudo-TORCH syndrome 2","type":"exact"}],"termid":"MONDO:0018828","xrefs":{"Monarch":{"xref_id":"0018828"}}}


id: PATO:0000783
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000783 digestive function value (obsolete PATO:0000783)","termid":"PATO:0000783"}


id: PBO:0058886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10523","termid":"PBO:0058886"}


id: PBO:0113350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for mRNA m6A methylation and meiosis; subunit of the m6A methyltransferase (MIS) complex; required for the stability of MIS complex subunits and consistent with a scaffolding function; non-essential gene required for pre-meiotic S-phase; may be required to initiate the meiotic program, for progression through meiotic divisions and for spore formation; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; homolog of VIRMA/virilizer/VIR","termid":"PBO:0113350"}


id: PBO:0057157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 302c","termid":"PBO:0057157"}


id: PBO:0068329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF32 divergent transcript","termid":"PBO:0068329"}


id: PBO:0004667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L34 (predicted)","termid":"PBO:0004667"}


id: MOD:00889
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-prolinium (charged L-proline) residue to N,N-dimethyl-L-proline.","definition_xrefs":["Unimod:36#P"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"protonated L-proline (L-prolinium) residue","termid":"MOD:00888"},{"relation_name":"is_a","term_name":"N,N-dimethyl-L-proline","termid":"MOD:00075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N-dimethyl-L-proline (from L-prolinium)","termid":"MOD:00889"}


id: PBO:0079476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twisted gastrulation BMP signaling modulator 1","termid":"PBO:0079476"}


id: MONDO:0002139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pathological processes in the sigmoid colon region of the large intestine (intestine, large).","definition_xrefs":["MESH:D012810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colonic disorder","termid":"MONDO:0003409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"sigmoid disease","secondary_identifiers":["UMLS:C0037072","DOID:1897","MEDGEN:20752"],"termid":"MONDO:0002139","xrefs":{"Monarch":{"xref_id":"0002139"}}}


id: GO:0015928
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of fucosyl compounds, substances containing a group derived from a cyclic form of fucose or a fucose derivative.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"fucosidase activity","termid":"GO:0015928"}


id: GO:0042004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Promotion of female sex and sexual phenotypes in the hermaphroditic soma. An example of this is found in Caenorhabditis elegans.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hermaphrodite somatic sex determination","termid":"GO:0042001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"feminization of hermaphrodite soma","termid":"GO:0042004"}


id: PBO:0042720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle exit and neuronal differentiation 1 pseudogene 2","termid":"PBO:0042720"}


id: PBO:0079742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein 8","termid":"PBO:0079742"}


id: GO:0042016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-20 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-20 receptor activity","synonyms":[{"name":"IL-20 receptor activity","type":"exact"},{"name":"IL-20R","type":"exact"}],"termid":"GO:0042016"}


id: MONDO:0006887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the parametrium, the connective tissue of the pelvic floor, extending from the subserous coat of the uterus laterally between the layers of the broad ligament.","definition_xrefs":["MESH:D010249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pelvic inflammatory disease","termid":"MONDO:0000922"},{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"},{"relation_name":"is_a","term_name":"serositis","termid":"MONDO:0043786"},{"relation_name":"is_a","term_name":"disorder of uterine broad ligament","termid":"MONDO:0045043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parametritis","secondary_identifiers":["SCTID:280483007","UMLS:C0030455","DOID:1260","EFO:1001084","MEDGEN:18295"],"synonyms":[{"name":"inflammation of parametrium","type":"exact"},{"name":"parametrium inflammation","type":"exact"},{"name":"pelvic cellulitis","type":"exact"}],"termid":"MONDO:0006887","xrefs":{"Monarch":{"xref_id":"0006887"}}}


id: MONDO:0008239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 4","secondary_identifiers":["UMLS:C1868356","MEDGEN:358301","OMIM:172110"],"synonyms":[{"name":"Pgm4","type":"related"},{"name":"milk PGM","type":"related"},{"name":"phosphoglucomutase 4","type":"exact"},{"name":"phosphoglucomutase type 4","type":"exact"}],"termid":"MONDO:0008239","xrefs":{"Monarch":{"xref_id":"0008239"}}}


id: GO:1905452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any canonical Wnt signaling pathway that is involved in regulation of stem cell proliferation.","definition_xrefs":["PMID:25640183","GO_REF:0000060","GOC:bc","GOC:TermGenie","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in regulation of stem cell proliferation (obsolete GO:1905452)","synonyms":[{"name":"Wnt receptor signaling pathway through beta-catenin involved in regulation of stem cell proliferation","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in regulation of stem cell proliferation","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in regulation of stem cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in regulation of stem cell proliferation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in regulation of stem cell proliferation","type":"exact"},{"name":"frizzled-1 receptor signaling pathway involved in regulation of stem cell proliferation","type":"narrow"}],"termid":"GO:1905452"}


id: GO:0008077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:rb"],"gene_count":0,"genotype_count":0,"name":"obsolete Hsp70/Hsp90 organizing protein activity (obsolete GO:0008077)","synonyms":[{"name":"Hsp70/Hsp90 organising protein activity","type":"exact"},{"name":"Hsp70/Hsp90 organizing protein activity","type":"exact"}],"termid":"GO:0008077"}


id: PBO:0039990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 6 interacting protein 4","termid":"PBO:0039990"}


id: GO:0140509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization of a polarized cell layer during morphogenesis in protozoa; an example is found during culmination in D. discoideum, involving alpha and beta catenins.","definition_xrefs":["PMID:22902739","PMID:21393547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelium-like organization","termid":"GO:0140509"}


id: GO:0035372
data:
  {"annotated_genes":["SJAG_02695","SJAG_02045"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72471],"is_not":false,"summary":null,"term":"GO:0035372"},{"annotations":[98890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904518"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, a microtubule.","definition_xrefs":["GOC:lb","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule cytoskeleton","termid":"GO:0072698"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02045":null,"SJAG_02695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to microtubule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to microtubule","type":"exact"}],"termid":"GO:0035372","terms_by_termid":{"GO:0035372":null,"GO:1904518":null}}


id: PBO:0067586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 745, pseudogene","termid":"PBO:0067586"}


id: GO:0030688
data:
  {"annotated_genes":["SJAG_03654","SJAG_00838","SJAG_05187","SJAG_04339","SJAG_01338","SJAG_00897","SJAG_03458","SJAG_05018","SJAG_01618","SJAG_03539","SJAG_05186","SJAG_02250","SJAG_04611"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[67449,71081,71618,72108,73094,76385,80997,81112,108920,113041,114980],"is_not":false,"summary":null,"term":"GO:0030688"},{"annotations":[74578,80439],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030692"}]},"cv_name":"cellular_component","definition":"A preribosomal complex consisting of 20S pre-rRNA, ribosomal proteins including late-associating small subunit proteins, and associated proteins; a precursor of the eukaryotic cytoplasmic small ribosomal subunit.","definition_xrefs":["PMID:10567516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preribosome","termid":"GO:0030684"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00838":null,"SJAG_00897":null,"SJAG_01338":null,"SJAG_01618":null,"SJAG_02250":null,"SJAG_03458":null,"SJAG_03539":null,"SJAG_03654":null,"SJAG_04339":null,"SJAG_04611":null,"SJAG_05018":null,"SJAG_05186":null,"SJAG_05187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030684"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0030684","GO:0005575"],"is_obsolete":false,"name":"preribosome, small subunit precursor","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"43S preribosome","type":"narrow"}],"termid":"GO:0030688","terms_by_termid":{"GO:0030688":null,"GO:0030692":null}}


id: GO:0016123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of xanthophylls, oxygen-containing carotenoids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid biosynthetic process","termid":"GO:0016117"},{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"xanthophyll biosynthetic process","synonyms":[{"name":"xanthophyll anabolism","type":"exact"},{"name":"xanthophyll biosynthesis","type":"exact"},{"name":"xanthophyll formation","type":"exact"},{"name":"xanthophyll synthesis","type":"exact"}],"termid":"GO:0016123"}


id: GO:0007006
data:
  {"annotated_genes":["SJAG_02501","SJAG_01951","SJAG_02656","SJAG_01405","SJAG_04370","SJAG_03168","SJAG_01640","SJAG_00576","SJAG_03282","SJAG_04996","SJAG_00404","SJAG_05300","SJAG_06468","SJAG_00687","SJAG_00168","SJAG_02398","SJAG_04208","SJAG_02034","SJAG_04317","SJAG_01470","SJAG_03710","SJAG_03416","SJAG_01917","SJAG_00569","SJAG_04965","SJAG_02355","SJAG_05268","SJAG_03502","SJAG_03515","SJAG_01305","SJAG_05241","SJAG_01120","SJAG_01949","SJAG_01780","SJAG_02361","SJAG_02002","SJAG_03700","SJAG_02028","SJAG_06440","SJAG_05302","SJAG_04237","SJAG_02524","SJAG_03633","SJAG_03563","SJAG_02797","SJAG_00230"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94923,98533,103210,104145,106324,107800,108162,109481,109606,111486,115010,119863],"is_not":false,"summary":null,"term":"GO:0007006"},{"annotations":[91366,76824,80401,109277,80777,103634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042407"},{"annotations":[94366,77295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007007"},{"annotations":[106855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990627"},{"annotations":[59048,71701],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070096"},{"annotations":[59349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007008"},{"annotations":[109549,77477,115188,90519,75741,79557,58405,118270,75195,109525,104858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045039"},{"annotations":[80068,80326,80387,58530,76242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"},{"annotations":[71702,112376,78377,59047,113778,112023,100144,109526,100495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045040"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a mitochondrial membrane, either of the lipid bilayer surrounding a mitochondrion.","definition_xrefs":["GOC:jl","GOC:mah","GOC:dph","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion organization","termid":"GO:0007005"},{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_00230":null,"SJAG_00404":null,"SJAG_00569":null,"SJAG_00576":null,"SJAG_00687":null,"SJAG_01120":null,"SJAG_01305":null,"SJAG_01405":null,"SJAG_01470":null,"SJAG_01640":null,"SJAG_01780":null,"SJAG_01917":null,"SJAG_01949":null,"SJAG_01951":null,"SJAG_02002":null,"SJAG_02028":null,"SJAG_02034":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02398":null,"SJAG_02501":null,"SJAG_02524":null,"SJAG_02656":null,"SJAG_02797":null,"SJAG_03168":null,"SJAG_03282":null,"SJAG_03416":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03563":null,"SJAG_03633":null,"SJAG_03700":null,"SJAG_03710":null,"SJAG_04208":null,"SJAG_04237":null,"SJAG_04317":null,"SJAG_04370":null,"SJAG_04965":null,"SJAG_04996":null,"SJAG_05241":null,"SJAG_05268":null,"SJAG_05300":null,"SJAG_05302":null,"SJAG_06440":null,"SJAG_06468":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0007005"],"is_obsolete":false,"name":"mitochondrial membrane organization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"mitochondrial membrane organisation","type":"exact"},{"name":"mitochondrial membrane organization and biogenesis","type":"related"}],"termid":"GO:0007006","terms_by_termid":{"GO:0007006":null,"GO:0007007":null,"GO:0007008":null,"GO:0032979":null,"GO:0042407":null,"GO:0045039":null,"GO:0045040":null,"GO:0070096":null,"GO:1990627":null}}


id: MONDO:0001232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute orbital inflammation","termid":"MONDO:0001230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orbital osteomyelitis","secondary_identifiers":["DOID:11232","MEDGEN:509878","UMLS:C0155258","ICD9:376.03","SCTID:65875003"],"synonyms":[{"name":"orbital osteomyelitis","type":"exact"}],"termid":"MONDO:0001232","xrefs":{"Monarch":{"xref_id":"0001232"}}}


id: GO:1900473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of phosphatidylcholine biosynthetic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:8056324","GOC:TermGenie","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphatidylcholine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900473)","synonyms":[{"name":"negative regulation of phosphatidylcholine anabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylcholine biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylcholine formation by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylcholine synthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900473"}


id: PBO:0090689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin alpha family nuclear import signal receptor adaptor Cut15","termid":"PBO:0090689"}


id: PBO:0045229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C17","termid":"PBO:0045229"}


id: PBO:0048917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member M","termid":"PBO:0048917"}


id: GO:0060107
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The extracellular matrix that is a regularly spaced circumferential ridge present in the cortical region of the cuticle. Annuli are delineated by annular furrows and are present throughout the cuticle with the exception of lateral regions where longitudinal alae are present.","definition_xrefs":["ISSN:15518507","GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cortical layer of collagen and cuticulin-based cuticle extracellular matrix","termid":"GO:0060106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"annuli extracellular matrix","synonyms":[{"name":"annulae","type":"related"},{"name":"annular rings","type":"related"},{"name":"annule(s)","type":"related"},{"name":"annulus","type":"related"}],"termid":"GO:0060107"}


id: MOD:00963
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modification from DeltaMass. OBSOLETE because redundant and identical to MOD:00462. Remap to MOD:00462.","definition_xrefs":["DeltaMass:357"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00963 Oxidation of Trp to kynurenine (obsolete MOD:00963)","termid":"MOD:00963"}


id: PR:Q9P7C1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erj5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7C1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C2E1P5.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P5.03","synonyms":[{"name":"Spom972h-erj5","type":"exact"}],"termid":"PR:Q9P7C1"}


id: PBO:0047840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box S1","termid":"PBO:0047840"}


id: GO:0140825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 a phenolic donor + H2O2 = 2 a phenolic radical donor + 2 H2O.","definition_xrefs":["RHEA:56136","PMID:19339248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"lactoperoxidase activity","secondary_identifiers":["MetaCyc:PEROXID-RXN","EC:1.11.1.7"],"synonyms":[{"name":"peroxidase activity","type":"broad"}],"termid":"GO:0140825"}


id: GO:0030901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles).","definition_xrefs":["PMID:4975589","PMID:4992177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"brain development","termid":"GO:0007420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"midbrain development","synonyms":[{"name":"mesencephalon development","type":"exact"}],"termid":"GO:0030901"}


id: MOD:01243
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a C-terminal residue to the potassium carboxylate salt.","definition_xrefs":["Unimod:530#C-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monopotassium salt","termid":"MOD:01072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium carboxylate C-terminal residue","synonyms":[{"name":"Cation:K","type":"related"},{"name":"Replacement of proton by potassium","type":"related"}],"termid":"MOD:01243"}


id: PBO:0000794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain protein","termid":"PBO:0000794"}


id: SO:0000723
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic sequence removed from the genome, as a normal event, by a process of recombination.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombination_feature","termid":"SO:0000298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iDNA","synonyms":[{"name":"INSDC_feature:iDNA","type":"exact"},{"name":"intervening DNA","type":"exact"}],"termid":"SO:0000723"}


id: SO:0001954
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region related to restriction enzyme function.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restriction_enzyme_region","synonyms":[{"name":"restriction enzyme region","type":"related"}],"termid":"SO:0001954"}


id: MONDO:0017327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary non-gestational choriocarcinoma of ovary is a rare ovarian germ cell malignant tumor, arising from primordial germ cells, usually presenting with nausea, vomiting, abdominal pain, menstrual irregularities, and characterized by fast growth pattern, metastasis to lung, liver and brain and production of human chorionic gonadotrophin (hCG). It is apparently chemoresistant and has a worse prognosis than gestational choriocarcinoma and hence should be distinguished from the latter by DNA polymorphism.","definition_xrefs":["Orphanet:289356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant germ cell tumor of ovary","termid":"MONDO:0018171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"primary non-gestational choriocarcinoma of ovary","secondary_identifiers":["MEDGEN:906353","UMLS:C4274424","SCTID:716588005","GARD:21136"],"synonyms":[{"name":"NGCO","type":"exact"},{"name":"primary non-gestational ovarian choriocarcinoma","type":"exact"}],"termid":"MONDO:0017327","xrefs":{"Monarch":{"xref_id":"0017327"}}}


id: GO:0043994
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 23) = CoA + histone H3 N6-acetyl-L-lysine (position 23).","definition_xrefs":["PMID:18552846","PMID:19056256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0140096","GO:0016740","GO:0003824","GO:0034212","GO:0003674"],"is_obsolete":false,"name":"histone H3K23 acetyltransferase activity","synonyms":[{"name":"histone H3-K23 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K23 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K23 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K23 specific)","type":"exact"}],"termid":"GO:0043994"}


id: GO:0006026
data:
  {"annotated_genes":["SJAG_00620"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006032"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aminoglycans, any polymer containing amino groups that consists of more than about 10 monosaccharide residues joined to each other by glycosidic linkages.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycan metabolic process","termid":"GO:0006022"},{"relation_name":"is_a","term_name":"macromolecule catabolic process","termid":"GO:0009057"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00620":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aminoglycan catabolic process","references_by_uniquename":{"GO_REF:0000043":null},"synonyms":[{"name":"aminoglycan breakdown","type":"exact"},{"name":"aminoglycan catabolism","type":"exact"},{"name":"aminoglycan degradation","type":"exact"}],"termid":"GO:0006026","terms_by_termid":{"GO:0006032":null}}


id: MONDO:0005654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection that is caused by the roundworm Ascaris lumbricoides, many cases of which remain asymptomatic. During the transient larval migratory phase, shortness of breath, fever, and eosinophilia can occur. Depending on the intestinal worm burden, a spectrum of gastrointestinal tract symptoms can occur.","definition_xrefs":["NCIT:C128392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ascaridida infectious disease","termid":"MONDO:0005656"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ascariasis","secondary_identifiers":["ICD10CM:B77","MEDGEN:2087","CSP:1248-7284","ICD9:127.0","DOID:456","icd11.foundation:17842540","MESH:D001196","EFO:0007154","SCTID:2435008","UMLS:C0003950"],"synonyms":[{"name":"Ascaris lumbricoides caused disease or disorder","type":"exact"},{"name":"Ascaris lumbricoides disease or disorder","type":"exact"},{"name":"Ascaris lumbricoides infection","type":"related"},{"name":"Ascaris lumbricoides infectious disease","type":"exact"},{"name":"ascariasis - roundworm","type":"exact"}],"termid":"MONDO:0005654","xrefs":{"Monarch":{"xref_id":"0005654"}}}


id: PBO:0059707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 15","termid":"PBO:0059707"}


id: PBO:0053123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin like 1","termid":"PBO:0053123"}


id: MONDO:1010766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vitiligo that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitiligo, non-human animal","termid":"MONDO:1010136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitiligo, domestic cat","secondary_identifiers":["OMIA:001055-9685"],"termid":"MONDO:1010766","xrefs":{"Monarch":{"xref_id":"1010766"}}}


id: PBO:0048230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 2A","termid":"PBO:0048230"}


id: PBO:0040395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit E1 pseudogene 3","termid":"PBO:0040395"}


id: MONDO:0016907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 8q deletion is a chromosome abnormality that occurs when there is a missing copy of the genetic material located on the long arm (q) of chromosome 8. The severity of the condition and the signs and symptoms depend on the size and location of the deletion and which genes are involved. Features that often occur in people with chromosome 8q deletion include developmental delay, intellectual disability, behavioral problems, and distinctive facial features. Most cases are not inherited, but people can pass the deletion on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0003770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 8","termid":"MONDO:0016873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 8","secondary_identifiers":["MEDGEN:208638","MESH:C537828","UMLS:C0795828","Orphanet:262065","GARD:3770","icd11.foundation:653068448"],"synonyms":[{"name":"8q deletion","type":"related"},{"name":"8q monosomy","type":"related"},{"name":"chromosome 8q deletion","type":"related"},{"name":"deletion 8q","type":"related"},{"name":"monosomy 8q","type":"related"},{"name":"partial deletion of chromosome 8q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 8","type":"exact"},{"name":"partial monosomy 8q","type":"related"},{"name":"partial monosomy of chromosome 8q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 8","type":"exact"}],"termid":"MONDO:0016907","xrefs":{"Monarch":{"xref_id":"0016907"}}}


id: PBO:0058308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4681","termid":"PBO:0058308"}


id: GO:1902867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of retina development in camera-type eye.","definition_xrefs":["GOC:TermGenie","GOC:mr","GO_REF:0000058","PMID:16872597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of retina development in camera-type eye","termid":"GO:1902866"},{"relation_name":"negatively_regulates","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of retina development in camera-type eye","synonyms":[{"name":"down regulation of retina development in camera-style eye","type":"exact"},{"name":"down regulation of retina development in camera-type eye","type":"exact"},{"name":"down regulation of retinal development","type":"related"},{"name":"down-regulation of retina development in camera-style eye","type":"exact"},{"name":"down-regulation of retina development in camera-type eye","type":"exact"},{"name":"down-regulation of retinal development","type":"related"},{"name":"downregulation of retina development in camera-style eye","type":"exact"},{"name":"downregulation of retina development in camera-type eye","type":"exact"},{"name":"downregulation of retinal development","type":"related"},{"name":"inhibition of retina development in camera-style eye","type":"narrow"},{"name":"inhibition of retina development in camera-type eye","type":"narrow"},{"name":"inhibition of retinal development","type":"related"},{"name":"negative regulation of retina development in camera-style eye","type":"exact"},{"name":"negative regulation of retinal development","type":"related"}],"termid":"GO:1902867"}


id: PBO:0065720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader Willi/Angelman region RNA 6","termid":"PBO:0065720"}


id: GO:0044693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: trehalose(out) + H+(out) = trehalose(in) + H+(in).","definition_xrefs":["PMID:11136464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:proton symporter activity","termid":"GO:0005351"},{"relation_name":"is_a","term_name":"trehalose transmembrane transporter activity","termid":"GO:0015574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"trehalose:proton symporter activity","synonyms":[{"name":"trehalose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0044693"}


id: GO:1990298
data:
  {"annotated_genes":["SJAG_01082","SJAG_02451"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[81662,116486],"is_not":false,"summary":null,"term":"GO:1990298"}]},"cv_name":"cellular_component","definition":"Protein complex that associates with the kinetochores.","definition_xrefs":["PMID:22521786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_02451":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"bub1-bub3 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1990298","terms_by_termid":{"GO:1990298":null}}


id: PBO:0040967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 38","termid":"PBO:0040967"}


id: PBO:0058814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7856","termid":"PBO:0058814"}


id: FYPO:0001298
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of palmitoyl-CoA ligase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal palmitoyl-CoA ligase activity","termid":"FYPO:0001297"},{"relation_name":"is_a","term_name":"decreased long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased palmitoyl-CoA ligase activity","synonyms":[{"name":"decreased palmitoyl-CoA synthetase activity","type":"exact"},{"name":"reduced palmitoyl-CoA ligase activity","type":"exact"}],"termid":"FYPO:0001298"}


id: MONDO:0700137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphosarcoma that occurs in a cow.","definition_xrefs":["NCIT:C134767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bovine neoplasm","termid":"MONDO:0700134"},{"relation_name":"is_a","term_name":"lymphosarcoma, non-human animal","termid":"MONDO:1010209"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bovine lymphosarcoma","termid":"MONDO:0700137","xrefs":{"Monarch":{"xref_id":"0700137"}}}


id: GO:2000659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-1-mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-1-mediated signaling pathway","termid":"GO:0070498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of interleukin-1-mediated signaling pathway","synonyms":[{"name":"regulation of IL-1 alpha-mediated signaling pathway","type":"related"},{"name":"regulation of IL-1 beta-mediated signaling pathway","type":"related"},{"name":"regulation of IL-1-mediated signaling pathway","type":"exact"},{"name":"regulation of interleukin-1 alpha-mediated signaling pathway","type":"related"},{"name":"regulation of interleukin-1 beta-mediated signaling pathway","type":"related"},{"name":"regulation of interleukin-1-mediated signalling pathway","type":"exact"}],"termid":"GO:2000659"}


id: GO:0071364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an epidermal growth factor stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to epidermal growth factor","termid":"GO:0070849"},{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to epidermal growth factor stimulus","synonyms":[{"name":"cellular response to EGF stimulus","type":"exact"}],"termid":"GO:0071364"}


id: FYPO:0000736
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the meiotic spindle is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long spindle","termid":"FYPO:0000730"},{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000120","FYPO:0002399"],"is_obsolete":false,"name":"long meiotic spindle","synonyms":[{"name":"elongated meiotic spindle","type":"exact"},{"name":"increased meiotic spindle length","type":"exact"},{"name":"long meiotic spindles","type":"exact"}],"termid":"FYPO:0000736"}


id: PBO:0058630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6762","termid":"PBO:0058630"}


id: GO:0050029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + L-lysine + O2 = 6-amino-2-oxohexanoate + H2O2 + NH4+.","definition_xrefs":["RHEA:14437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid oxidase activity","termid":"GO:0001716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-lysine oxidase activity","secondary_identifiers":["EC:1.4.3.14","KEGG_REACTION:R00447","MetaCyc:L-LYSINE-OXIDASE-RXN"],"synonyms":[{"name":"L-lysine alpha-oxidase activity","type":"related"},{"name":"L-lysine:oxygen 2-oxidoreductase (deaminating)","type":"related"},{"name":"L-lysyl-alpha-oxidase activity","type":"related"}],"termid":"GO:0050029"}


id: PBO:0057943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3667 host gene","termid":"PBO:0057943"}


id: PBO:0091681
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MicroTubule Organizer","termid":"PBO:0091681"}


id: PBO:0084400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lunapark family member involved in ER network formation; regulates the ER asymmetry-induced inheritance block during ER stress; localizes to ER junctions and this localization is regulated by the yeast atlastin ortholog Sey1p; required for reticulophagy where it is proposed to stabilize the actin-dependent remodeling of the ER; interacts with the reticulon protein Rtn1p; induced in response to the DNA-damaging agent MMS","termid":"PBO:0084400"}


id: PBO:0085371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphotyrosine-specific protein phosphatase; major role in the pheromone adaptive response through dephosphorylation of the Fus3p MAPK with a minor role by Ptp2p and Msg5p; minor role in the inactivation of Hog1p MAPK during osmolarity sensing with major role by Ptp2p; dephosphorylates and regulates the localization of Hog1p; minor role in the cell wall integrity pathway through tyrosine dephosphorylation of the MAPK Slt2p while Ptp2p plays a major role; localizes to the cytoplasm","termid":"PBO:0085371"}


id: PBO:0048696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLIS3 antisense RNA 1","termid":"PBO:0048696"}


id: GO:1905364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endosomal vesicle fusion.","definition_xrefs":["GOC:bc","GOC:PARL","PMID:26911690","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle fusion","termid":"GO:0031338"},{"relation_name":"regulates","term_name":"endosomal vesicle fusion","termid":"GO:0034058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"regulation of endosomal vesicle fusion","synonyms":[{"name":"regulation of endosome vesicle fusion","type":"exact"}],"termid":"GO:1905364"}


id: PBO:0028145
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleolus,_with_protein_mislocalized_to_cytoplasm","termid":"PBO:0028145"}


id: GO:1902415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mRNA binding.","definition_xrefs":["PMID:22890846","GOC:TermGenie","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of binding","termid":"GO:0051098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mRNA binding","termid":"GO:1902415"}


id: PBO:0029056
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-large_vacuoles_present_in_decreased_numbers_during_vegetative_growth","termid":"PBO:0029056"}


id: MONDO:0002779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extraskeletal chondroma usually arising from the dura.","definition_xrefs":["NCIT:C7001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"},{"relation_name":"is_a","term_name":"soft tissue chondroma","termid":"MONDO:0006423"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system chondroma","secondary_identifiers":["UMLS:C1333019","MEDGEN:272474","DOID:3813"],"synonyms":[{"name":"CNS chondroma","type":"exact"},{"name":"CNS osteochondroma","type":"exact"},{"name":"central nervous system chondroma","type":"exact"},{"name":"central nervous system osteochondroma","type":"exact"},{"name":"chondroma of CNS","type":"exact"},{"name":"chondroma of central nervous system","type":"exact"},{"name":"chondroma of the CNS","type":"exact"},{"name":"chondroma of the central nervous system","type":"exact"},{"name":"osteochondroma of CNS","type":"exact"},{"name":"osteochondroma of central nervous system","type":"exact"},{"name":"osteochondroma of the CNS","type":"exact"},{"name":"osteochondroma of the central nervous system","type":"exact"}],"termid":"MONDO:0002779","xrefs":{"Monarch":{"xref_id":"0002779"}}}


id: PBO:0117102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLK antisense RNA 1","termid":"PBO:0117102"}


id: PBO:0048718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin pseudogene 1","termid":"PBO:0048718"}


id: PBO:0077279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 18","termid":"PBO:0077279"}


id: MONDO:0011357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eccrine syringofibroadenomatosis with eyelid abnormalities","secondary_identifiers":["MESH:C566347","OMIM:603669","MEDGEN:355022","UMLS:C1863618"],"synonyms":[{"name":"eccrine syringofibroadenomatosis with eyelid abnormalities","type":"exact"}],"termid":"MONDO:0011357","xrefs":{"Monarch":{"xref_id":"0011357"}}}


id: MONDO:0002936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A scrotal carcinoma that involves the basal cell.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scrotum squamous cell carcinoma","termid":"MONDO:0001651"},{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"scrotum basal cell carcinoma","secondary_identifiers":["MEDGEN:233437","NCIT:C6386","UMLS:C1335934","DOID:4278"],"synonyms":[{"name":"basal cell carcinoma of scrotum","type":"exact"},{"name":"basal cell carcinoma of the scrotum","type":"related"},{"name":"basal cell scrotal carcinoma","type":"exact"},{"name":"scrotal basal cell carcinoma","type":"exact"},{"name":"scrotum skin basal cell carcinoma","type":"exact"},{"name":"skin basal cell carcinoma of scrotum","type":"exact"}],"termid":"MONDO:0002936","xrefs":{"Monarch":{"xref_id":"0002936"}}}


id: GO:0060262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate frequency or extent of the covalent attachment of a palmitoyl group to the N-terminal amino acid residue of a protein.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of N-terminal protein palmitoylation","termid":"GO:0060254"},{"relation_name":"is_a","term_name":"negative regulation of protein lipidation","termid":"GO:1903060"},{"relation_name":"negatively_regulates","term_name":"N-terminal protein palmitoylation","termid":"GO:0006500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of N-terminal protein palmitoylation","termid":"GO:0060262"}


id: GO:0009620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a fungus.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fungus","secondary_identifiers":["GO:0009621"],"synonyms":[{"name":"response to fungi","type":"exact"}],"termid":"GO:0009620"}


id: PBO:0078318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta diversity 3","termid":"PBO:0078318"}


id: GO:0050069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + NAD+ = 1,2-didehydropiperidine-2-carboxylate + NH3 + NADH.","definition_xrefs":["EC:1.4.1.15","MetaCyc:LYSINE-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lysine dehydrogenase activity","secondary_identifiers":["RHEA:18505"],"synonyms":[{"name":"L-lysine:NAD+ oxidoreductase (deaminating, cyclizing)","type":"related"}],"termid":"GO:0050069"}


id: PBO:0041183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin like 3","termid":"PBO:0041183"}


id: MONDO:0000609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sideroblastic anemia with spinocerebellar ataxia (obsolete MONDO:0000609)","termid":"MONDO:0000609","xrefs":{"Monarch":{"xref_id":"0000609"}}}


id: GO:0006180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that generates deoxyguanosine from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyguanosine biosynthetic process","termid":"GO:0042452"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside salvage","termid":"GO:0043098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"deoxyguanosine salvage","termid":"GO:0006180"}


id: PBO:0082325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in the degradation of ubiquitinated substrates; recruited to the GAL1-10 promoter region upon induction of transcription; similar to human TBP1","termid":"PBO:0082325"}


id: GO:0042592
data:
  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id: PBO:0051672
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id: MONDO:1010120
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sudden death in children < 19 years of age that remains unexplained after a thorough case investigation, including performance of a complete autopsy with ancillary testing, and review of the clinical history and circumstances of death.","definition_xrefs":["PMID:28679642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sudden unexpected death in pediatrics","synonyms":[{"name":"SUDP","type":"exact"}],"termid":"MONDO:1010120","xrefs":{"Monarch":{"xref_id":"1010120"}}}


id: GO:0141074
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id: GO:0007170
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane receptor protein tyrosine kinase ligand binding (obsolete GO:0007170)","synonyms":[{"name":"transmembrane receptor protein tyrosine kinase ligand binding","type":"exact"}],"termid":"GO:0007170"}


id: MONDO:0016410
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Central or secondary congenital hypothyroidism is a type of permanent congenital hypothyroidism characterized by permanent thyroid hormone deficiency that is present from birth and secondary to a disorder in the thyroid-stimulating hormone (TSH) - thyrotropin-releasing hormone (TRH) system.","definition_xrefs":["Orphanet:226298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"permanent congenital hypothyroidism","termid":"MONDO:0016408"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central congenital hypothyroidism","secondary_identifiers":["NANDO:2200332","NCIT:C113144","NANDO:1200390","NANDO:2200340","icd11.foundation:848364569","MEDGEN:927869","GARD:12280","UMLS:C4302200"],"synonyms":[{"name":"TSH deficiency","type":"exact"},{"name":"central hypothyroidism","type":"exact"},{"name":"hypothalamic-pituitary hypothyroidism","type":"exact"},{"name":"secondary hypothyroidism","type":"exact"},{"name":"thyroid stimulating hormone deficiency","type":"exact"},{"name":"thyrotropin deficiency","type":"exact"}],"termid":"MONDO:0016410","xrefs":{"Monarch":{"xref_id":"0016410"}}}


id: PR:O14333
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id: MONDO:0008571
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id: MONDO:0006430
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mantle cell lymphoma occurring in the spleen.","definition_xrefs":["NCIT:C7306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mantle cell lymphoma","termid":"MONDO:0018876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"splenic mantle cell lymphoma","secondary_identifiers":["EFO:1000549","MEDGEN:384473","UMLS:C2018777"],"synonyms":[{"name":"splenic mantle cell lymphoma","type":"exact"}],"termid":"MONDO:0006430","xrefs":{"Monarch":{"xref_id":"0006430"}}}


id: PBO:0030130
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_potassium_level","termid":"PBO:0030130"}


id: MONDO:0002002
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypothyroidism","termid":"MONDO:0005420"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postsurgical hypothyroidism","secondary_identifiers":["DOID:1458","SCTID:27059002","UMLS:C0154157","ICD9:244.0","MEDGEN:509534"],"synonyms":[{"name":"post-surgical hypothyroidism","type":"exact"},{"name":"postoperative hypothyroidism","type":"exact"}],"termid":"MONDO:0002002","xrefs":{"Monarch":{"xref_id":"0002002"}}}


id: MONDO:0022457
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyloblepharon filiforme imperforate anus","termid":"MONDO:0022457","xrefs":{"Monarch":{"xref_id":"0022457"}}}


id: PBO:0087825
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIE large subunit; involved in recruitment of RNA polymerase II to the promoter, activation of TFIIH, and promoter opening","termid":"PBO:0087825"}


id: PBO:0013003
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  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curator_email","termid":"PBO:0013003"}


id: PBO:0086670
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology and RT-PCR; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0086670"}


id: GO:0040019
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id: MONDO:0019669
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"achondrogenesis","termid":"MONDO:0019648"},{"relation_name":"is_a","term_name":"type 2 collagenopathy","termid":"MONDO:0022800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"hypochondrogenesis","secondary_identifiers":["GARD:16815","DOID:0080044","Orphanet:93297","MEDGEN:107448","MESH:C563007","icd11.foundation:1494246635","NANDO:2201346","UMLS:C0542428"],"termid":"MONDO:0019669","xrefs":{"Monarch":{"xref_id":"0019669"}}}


id: MONDO:0001019
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A nonspecific term referring to impaired vision. Major subcategories include stimulus deprivation-induced amblyopia and toxic amblyopia. Stimulus deprivation-induced amblyopia is a developmental disorder of the visual cortex. A discrepancy between visual information received by the visual cortex from each eye results in abnormal cortical development. strabismus and refractive errors may cause this condition. Toxic amblyopia is a disorder of the optic nerve which is associated with alcoholism, tobacco smoking, and other toxins and as an adverse effect of the use of some medications.","definition_xrefs":["MESH:D000550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amblyopia","termid":"MONDO:0001020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppression amblyopia","secondary_identifiers":["SCTID:35600002","ICD9:368.01","UMLS:C0750903","DOID:10375","MEDGEN:152911"],"synonyms":[{"name":"strabismic amblyopia","type":"exact"}],"termid":"MONDO:0001019","xrefs":{"Monarch":{"xref_id":"0001019"}}}


id: GO:1900489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of [2Fe-2S] cluster assembly.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of [2Fe-2S] cluster assembly","termid":"GO:1900487"},{"relation_name":"is_a","term_name":"positive regulation of iron-sulfur cluster assembly","termid":"GO:1903331"},{"relation_name":"positively_regulates","term_name":"[2Fe-2S] cluster assembly","termid":"GO:0044571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016226"}],"interesting_parent_ids":["GO:0044085","GO:0016226","GO:0008150"],"is_obsolete":false,"name":"positive regulation of [2Fe-2S] cluster assembly","synonyms":[{"name":"activation of 2Fe-2S cluster assembly","type":"narrow"},{"name":"activation of [2Fe-2S] cluster assembly","type":"narrow"},{"name":"activation of [2Fe-2S] cluster biosynthetic process","type":"related"},{"name":"positive regulation of 2Fe-2S cluster assembly","type":"exact"},{"name":"positive regulation of [2Fe-2S] cluster biosynthetic process","type":"related"},{"name":"up regulation of 2Fe-2S cluster assembly","type":"exact"},{"name":"up regulation of [2Fe-2S] cluster assembly","type":"exact"},{"name":"up regulation of [2Fe-2S] cluster biosynthetic process","type":"related"},{"name":"up-regulation of 2Fe-2S cluster assembly","type":"exact"},{"name":"up-regulation of [2Fe-2S] cluster assembly","type":"exact"},{"name":"up-regulation of [2Fe-2S] cluster biosynthetic process","type":"related"},{"name":"upregulation of 2Fe-2S cluster assembly","type":"exact"},{"name":"upregulation of [2Fe-2S] cluster assembly","type":"exact"},{"name":"upregulation of [2Fe-2S] cluster biosynthetic process","type":"related"}],"termid":"GO:1900489"}


id: GO:0035120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring after embryonic development, by which the anatomical structures of an appendage are generated and organized. An appendage is an organ or part that is attached to the trunk of an organism, such as a limb or a branch.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"is_a","term_name":"appendage morphogenesis","termid":"GO:0035107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic appendage morphogenesis","termid":"GO:0035120"}


id: GO:1901622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of smoothened signaling pathway involved in dorsal/ventral neural tube patterning.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smoothened signaling pathway","termid":"GO:0045880"},{"relation_name":"is_a","term_name":"regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","termid":"GO:1901620"},{"relation_name":"positively_regulates","term_name":"smoothened signaling pathway involved in dorsal/ventral neural tube patterning","termid":"GO:0060831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","synonyms":[{"name":"activation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"activation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"activation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"activation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"positive regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"positive regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"positive regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"}],"termid":"GO:1901622"}


id: GO:0043550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lipid kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a simple or complex lipid.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kinase activity","termid":"GO:0043549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lipid kinase activity","termid":"GO:0043550"}


id: GO:0098534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the assembly of one or more centrioles.","definition_xrefs":["GOC:dos","PMID:24075808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center organization","termid":"GO:0031023"},{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007010","GO:0044085"],"is_obsolete":false,"name":"centriole assembly","termid":"GO:0098534"}


id: PBO:0060772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B6","termid":"PBO:0060772"}


id: GO:0009196
data:
  {"annotated_genes":["SJAG_00885","SJAG_04665","SJAG_02874","SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109213,97390,94319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[72795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[72794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrimidine deoxynucleoside diphosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate metabolic process","termid":"GO:0009138"},{"relation_name":"is_a","term_name":"deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009186"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine deoxyribonucleoside diphosphate metabolism","type":"exact"}],"termid":"GO:0009196","terms_by_termid":{"GO:0006227":null,"GO:0006233":null,"GO:0006240":null}}


id: PATO:0002008
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A complete three dimensional shape in which there is a line connecting pair of points on the object that lies outside the object. Or: a shape with cavities. Contrast: concave.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"has_part","term_name":"concave","termid":"PATO:0001857"},{"relation_name":"is_a","term_name":"3-D shape","termid":"PATO:0002266"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concave 3-D shape","secondary_identifiers":["Image:http\\://en.wikipedia.org/wiki/Image\\:Convex_polygon_illustration2.png"],"termid":"PATO:0002008"}


id: GO:0048936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process from a neuron whose cell body resides in the peripheral nervous system. The axon carries action potential from the cell body towards target cells.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonogenesis","termid":"GO:0007409"},{"relation_name":"part_of","term_name":"peripheral nervous system neuron development","termid":"GO:0048935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral nervous system neuron axonogenesis","termid":"GO:0048936"}


id: PBO:0071548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 13","termid":"PBO:0071548"}


id: GO:0018520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-1,2-dihydroxy-4-methylcyclohexa-3,5-diene-1-carboxylate + NADP+ = 4-methylcatechol + NADPH + H+ + CO2.","definition_xrefs":["EC:1.3.1.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cis-1,2-dihydroxy-4-methylcyclohexa-3,5-diene-1-carboxylate dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0179","MetaCyc:1.3.1.67-RXN"],"synonyms":[{"name":"4-methylcyclohexa-3,5-diene-1,2-cis-diol-1-carboxylic acid dehydrogenase activity","type":"exact"},{"name":"cis-1,2-dihydroxy-4-methylcyclohexa-3,5-diene-1-carboxylate:NAD(P)+ oxidoreductase (decarboxylating)","type":"related"}],"termid":"GO:0018520"}


id: GO:1901878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of calcium ion binding.","definition_xrefs":["PMID:16432188","GOC:rl","GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of calcium ion binding (obsolete GO:1901878)","synonyms":[{"name":"activation of calcium ion binding","type":"narrow"},{"name":"activation of calcium ion storage activity","type":"related"},{"name":"positive regulation of calcium ion storage activity","type":"related"},{"name":"up regulation of calcium ion binding","type":"exact"},{"name":"up regulation of calcium ion storage activity","type":"related"},{"name":"up-regulation of calcium ion binding","type":"exact"},{"name":"up-regulation of calcium ion storage activity","type":"related"},{"name":"upregulation of calcium ion binding","type":"exact"},{"name":"upregulation of calcium ion storage activity","type":"related"}],"termid":"GO:1901878"}


id: PBO:0074322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCA4 interacting SWI/SNF chromatin remodeling complex scaffold lncRNA","termid":"PBO:0074322"}


id: MONDO:1011770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrosis of digits, non-human animal","secondary_identifiers":["OMIA:001665"],"termid":"MONDO:1011770","xrefs":{"Monarch":{"xref_id":"1011770"}}}


id: PBO:0041423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C8orf34 antisense RNA 1","termid":"PBO:0041423"}


id: PBO:0045797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin 1","termid":"PBO:0045797"}


id: MONDO:0044262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cyanide, inability to smell (obsolete MONDO:0044262)","secondary_identifiers":["OMIM:304300"],"synonyms":[{"name":"cyanide, inability to smell","type":"related"}],"termid":"MONDO:0044262","xrefs":{"Monarch":{"xref_id":"0044262"}}}


id: PBO:0046369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTPD4 divergent transcript","termid":"PBO:0046369"}


id: GO:0016235
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An inclusion body formed by dynein-dependent retrograde transport of an aggregated protein on microtubules.","definition_xrefs":["PMID:11121744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body","termid":"GO:0016234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"aggresome","secondary_identifiers":["Wikipedia:Aggresome"],"termid":"GO:0016235"}


id: SO:0002323
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A frameshift_variant (SO:0001589) that is degraded by nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift_variant","termid":"SO:0001589"},{"relation_name":"is_a","term_name":"NMD_triggering_variant","termid":"SO:0002319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshift_variant_NMD_triggering","synonyms":[{"name":"frameshift variant-NMD triggering","type":"exact"},{"name":"frameshift variant-nonsense-mediated decay triggering","type":"exact"}],"termid":"SO:0002323"}


id: PBO:0050672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 7 (pseudogene)","termid":"PBO:0050672"}


id: GO:0047830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N2-(D-1-carboxyethyl)-L-arginine + NAD+ + H2O = L-arginine + pyruvate + NADH.","definition_xrefs":["EC:1.5.1.11","MetaCyc:D-OCTOPINE-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"D-octopine dehydrogenase activity","secondary_identifiers":["RHEA:16285"],"synonyms":[{"name":"2-N-(D-1-carboxyethyl)-L-arginine:NAD+ oxidoreductase (L-arginine-forming)","type":"related"},{"name":"D-octopine synthase activity","type":"related"},{"name":"N2-(D-1-carboxyethyl)-L-arginine:NAD+ oxidoreductase (L-arginine-forming)","type":"related"},{"name":"ODH activity","type":"related"},{"name":"octopine dehydrogenase activity","type":"related"},{"name":"octopine:NAD oxidoreductase activity","type":"related"}],"termid":"GO:0047830"}


id: GO:0071437
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A cell projection that emerges from the ECM-facing surface of a cell, is enriched in actin and associated cytoskeletal proteins, and displays localized proteolytic activity toward the substrate.","definition_xrefs":["PMID:19491051","PMID:19931459","GOC:mah","PMID:16651416"],"gene_count":0,"genotype_count":0,"name":"obsolete invadopodium (obsolete GO:0071437)","termid":"GO:0071437"}


id: GO:0031533
data:
  {"annotated_genes":["SJAG_01724","SJAG_04488"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[64696,70224],"is_not":false,"summary":null,"term":"GO:0031533"}]},"cv_name":"cellular_component","definition":"A protein complex that consists of an RNA 5' triphosphatase and a guanyl transferase (Cet1p and Ceg1p in S. cerevisiae; Pct1 and Ceg1 in S. pombe) and is involved in mRNA capping.","definition_xrefs":["PMID:9345280","PMID:12455993","GOC:vw","PMID:10347220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01724":null,"SJAG_04488":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"mRNA capping enzyme complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000104":null},"termid":"GO:0031533","terms_by_termid":{"GO:0031533":null}}


id: MONDO:0018979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multifocal motor neuropathy (MMN) is a rare acquired immune-mediatedneuropathy characterized clinically by a purely motor deficit with conduction block and asymmetric multifocal weakness, fasciculations, and cramping.","definition_xrefs":["Orphanet:641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired peripheral neuropathy","termid":"MONDO:0015923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"multifocal motor neuropathy","secondary_identifiers":["UMLS:C0393847","NANDO:1200031","GARD:11011","SCTID:230591002","MEDGEN:581615","ICD10CM:G61.82","NORD:1952","ICD9:357.89"],"synonyms":[{"name":"MMN","type":"exact"},{"name":"MMNCB","type":"exact"},{"name":"multifocal motor neuropathy with conduction block","type":"exact"}],"termid":"MONDO:0018979","xrefs":{"Monarch":{"xref_id":"0018979"}}}


id: PBO:0030700
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_hydrogen_peroxide","termid":"PBO:0030700"}


id: GO:1903082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of C-C chemokine receptor CCR7 signaling pathway.","definition_xrefs":["PMID:11602640","GOC:rl","GOC:BHF","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine-mediated signaling pathway","termid":"GO:0070101"},{"relation_name":"is_a","term_name":"regulation of C-C chemokine receptor CCR7 signaling pathway","termid":"GO:1903080"},{"relation_name":"positively_regulates","term_name":"C-C chemokine receptor CCR7 signaling pathway","termid":"GO:0038118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of C-C chemokine receptor CCR7 signaling pathway","synonyms":[{"name":"activation of C-C chemokine receptor CCR7 signaling pathway","type":"narrow"},{"name":"activation of C-C chemokine receptor CCR7 signalling pathway","type":"narrow"},{"name":"activation of CCR7 signaling pathway","type":"related"},{"name":"positive regulation of C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"positive regulation of CCR7 signaling pathway","type":"related"},{"name":"up regulation of C-C chemokine receptor CCR7 signaling pathway","type":"exact"},{"name":"up regulation of C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"up regulation of CCR7 signaling pathway","type":"related"},{"name":"up-regulation of C-C chemokine receptor CCR7 signaling pathway","type":"exact"},{"name":"up-regulation of C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"up-regulation of CCR7 signaling pathway","type":"related"},{"name":"upregulation of C-C chemokine receptor CCR7 signaling pathway","type":"exact"},{"name":"upregulation of C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"upregulation of CCR7 signaling pathway","type":"related"}],"termid":"GO:1903082"}


id: PBO:0045565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 13","termid":"PBO:0045565"}


id: MONDO:0012358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"leprosy","termid":"MONDO:0005124"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leprosy, susceptibility to, 1","secondary_identifiers":["OMIM:609888","MEDGEN:332089","UMLS:C1835932"],"synonyms":[{"name":"LPRS1","type":"exact"},{"name":"leprosy, Paucibacillary type, susceptibility to, 1","type":"related"},{"name":"leprosy, paucibacillary type, susceptibility to","type":"exact"},{"name":"leprosy, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0012358","xrefs":{"Monarch":{"xref_id":"0012358"}}}


id: GO:0071576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to tetrahydrodictyopterin, the pterin 2-amino-6-[(1R,2R)-1,2-dihydroxypropyl]-5,6,7,8-tetrahydropteridin-4(3H)-one.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrahydrobiopterin binding","termid":"GO:0034617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"tetrahydrodictyopterin binding","synonyms":[{"name":"D-threo-tetrahydrobiopterin","type":"exact"},{"name":"DH4 binding","type":"exact"}],"termid":"GO:0071576"}


id: MONDO:0029000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition or physical state produced by the ingestion, injection, inhalation of or exposure to a deleterious agent.","definition_xrefs":["MESH:D011041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poisoning","secondary_identifiers":["SCTID:75478009","EFO:0008546"],"synonyms":[{"name":"Poisonings","type":"related"},{"name":"intoxication","type":"related"},{"name":"poisoning syndrome","type":"related"}],"termid":"MONDO:0029000","xrefs":{"Monarch":{"xref_id":"0029000"}}}


id: GO:0050072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 7-methylguanosine 5'-triphospho-5'-polynucleotide + H2O = 7-methylguanosine 5'-phosphate + polynucleotide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete m7G(5')pppN diphosphatase activity (obsolete GO:0050072)","synonyms":[{"name":"M(7)G(5')pppN pyrophosphatase activity","type":"exact"}],"termid":"GO:0050072"}


id: GO:0033148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the activity of an intracellular estrogen receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033145"},{"relation_name":"is_a","term_name":"regulation of intracellular estrogen receptor signaling pathway","termid":"GO:0033146"},{"relation_name":"positively_regulates","term_name":"estrogen receptor signaling pathway","termid":"GO:0030520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of intracellular estrogen receptor signaling pathway","synonyms":[{"name":"positive regulation of estrogen receptor signaling pathway","type":"broad"},{"name":"positive regulation of estrogen receptor signalling pathway","type":"broad"}],"termid":"GO:0033148"}


id: PBO:0064886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit Balpha","termid":"PBO:0064886"}


id: PBO:0082387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta 7 subunit of the 20S proteasome","termid":"PBO:0082387"}


id: FYPO:0002797
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of protein degradation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased protein level","termid":"FYPO:0000836"},{"relation_name":"is_a","term_name":"abnormal protein degradation","termid":"FYPO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein degradation","synonyms":[{"name":"decreased protein breakdown","type":"exact"},{"name":"decreased protein catabolic process","type":"exact"},{"name":"decreased protein catabolism","type":"exact"},{"name":"reduced protein degradation","type":"exact"}],"termid":"FYPO:0002797"}


id: PBO:0075562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine kinase 1","termid":"PBO:0075562"}


id: FYPO:0002811
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a non-ionic osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to osmotic stress","termid":"FYPO:0000270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to non-ionic osmotic stress","synonyms":[{"name":"decreased growth during cellular response to non-ionic osmotic stress","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to non-ionic osmotic stress","type":"exact"},{"name":"hypersensitive to non-ionic osmotic stress","type":"exact"},{"name":"sensitive to non-ionic osmotic stress during mitotic cell cycle","type":"related"},{"name":"sensitive to non-ionic osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0002811"}


id: MONDO:0010500
data:
  {"annotated_genes":["SJAG_03900"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87137],"is_not":false,"summary":null,"term":"MONDO:0010500"}]},"cv_name":"mondo","definition":"Any X-linked syndromic intellectual disability in which the cause of the disease is a mutation in the TAF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03900":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked, syndromic 33","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:895979","UMLS:C4225418","OMIM:300966"],"synonyms":[{"name":"MRXS33","type":"exact"},{"name":"TAF1 X-linked syndromic intellectual disability","type":"exact"},{"name":"X-linked syndromic intellectual disability caused by mutation in TAF1","type":"exact"},{"name":"intellectual developmental disorder, X-linked syndromic 33, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked, syndromic 33","type":"exact"},{"name":"intellectual disability, X-linked, syndromic type 33","type":"exact"},{"name":"mental retardation, X-linked, syndromic 33","type":"exact"},{"name":"mental retardation, X-linked, syndromic type 33","type":"exact"}],"termid":"MONDO:0010500","terms_by_termid":{"MONDO:0010500":null},"xrefs":{"Monarch":{"xref_id":"0010500"}}}


id: PBO:0112818
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphate Quantity Regulator","termid":"PBO:0112818"}


id: MONDO:0008624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Upington disease is characterized by Perthes-like pelvic anomalies (premature closure of the capital femoral epiphyses and widened femoral necks with flattened femoral heads), enchondromata and ecchondromata. It has been described in siblings from three generations of one family. Transmission is autosomal dominant.","definition_xrefs":["Orphanet:3408"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Upington disease","secondary_identifiers":["icd11.foundation:1846351406","MESH:C536472","UMLS:C1860596","MEDGEN:348145","SCTID:719041000","GARD:5421","OMIM:191520"],"synonyms":[{"name":"Perthes-like hip disease, enchondromata, and Ecchondromata","type":"related"},{"name":"Upington disease","type":"exact"},{"name":"familial dyschondroplasia","type":"related"},{"name":"hip dysplasia-enchondromata-ecchondroma syndrome","type":"exact"}],"termid":"MONDO:0008624","xrefs":{"Monarch":{"xref_id":"0008624"}}}


id: PBO:0087893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription cofactor; forms complexes with Swi4p and Mbp1p to regulate transcription at the G1/S transition; involved in meiotic gene expression; also binds Stb1p to regulate transcription at START; cell wall stress induces phosphorylation by Mpk1p, which regulates Swi6p localization; required for the unfolded protein response, independently of its known transcriptional coactivators","termid":"PBO:0087893"}


id: PBO:0025499
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trimethylaminuria","termid":"PBO:0025499"}


id: MONDO:0014571
data:
  {"annotated_genes":["SJAG_03588","SJAG_01630"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87262,87263],"is_not":false,"summary":null,"term":"MONDO:0014571"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary optic atrophy","termid":"MONDO:0043878"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01630":null,"SJAG_03588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"optic atrophy 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18199","OMIM:616289","UMLS:C4225384","MEDGEN:898858","DOID:0111442"],"synonyms":[{"name":"ACO2 autosomal recessive isolated optic atrophy","type":"exact"},{"name":"OPA9","type":"related"},{"name":"autosomal recessive isolated optic atrophy caused by mutation in ACO2","type":"exact"},{"name":"optic atrophy 9","type":"exact"}],"termid":"MONDO:0014571","terms_by_termid":{"MONDO:0014571":null},"xrefs":{"Monarch":{"xref_id":"0014571"}}}


id: PBO:0089220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-like protein involved in autophagy Clg1","termid":"PBO:0089220"}


id: PBO:0011969
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cerevisiae YLL042C","termid":"PBO:0011969"}


id: MONDO:0021068
data:
  {"annotated_genes":["SJAG_02426","SJAG_04206","SJAG_04394"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88328,88329,88330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008170"}]},"cv_name":"mondo","definition":"A benign, borderline, or malignant neoplasm involving the ovary.","definition_xrefs":["NCIT:C4984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian disorder","termid":"MONDO:0005558"},{"relation_name":"is_a","term_name":"female reproductive system neoplasm","termid":"MONDO:0021148"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02426":null,"SJAG_04206":null,"SJAG_04394":null},"genotype_count":0,"is_obsolete":false,"name":"ovarian neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:239.5","MEDGEN:181539","UMLS:C0919267","SCTID:123843001","EFO:0003893"],"synonyms":[{"name":"neoplasm of ovary","type":"exact"},{"name":"neoplasm of the ovary","type":"exact"},{"name":"ovarian neoplasm","type":"exact"},{"name":"ovarian tumor","type":"exact"},{"name":"ovarian tumors","type":"exact"},{"name":"ovarian tumour","type":"exact"},{"name":"ovarian tumours","type":"exact"},{"name":"ovary neoplasm","type":"exact"},{"name":"ovary neoplasm (disease)","type":"exact"},{"name":"ovary tumor","type":"exact"},{"name":"ovary tumour","type":"exact"},{"name":"tumor of ovary","type":"exact"},{"name":"tumor of the ovary","type":"exact"},{"name":"tumour of ovary","type":"exact"},{"name":"tumour of the ovary","type":"exact"}],"termid":"MONDO:0021068","terms_by_termid":{"MONDO:0008170":null},"xrefs":{"Monarch":{"xref_id":"0021068"}}}


id: MONDO:0015037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lissencephaly with cerebellar hypoplasia type D (LCHd) is a form of lissencephaly with cerebellar hypoplasia characterized by pronounced microcephaly (at least B1 3 SD), intellectual disability, spastic diplegia and moderate to severe cerebellar hypoplasia involving both vermis and hemispheres.","definition_xrefs":["Orphanet:100014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly with cerebellar hypoplasia","termid":"MONDO:0019450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly with cerebellar hypoplasia type D","secondary_identifiers":["GARD:19734","icd11.foundation:1633599738","MEDGEN:895252","SCTID:715821000","UMLS:C4274991"],"termid":"MONDO:0015037","xrefs":{"Monarch":{"xref_id":"0015037"}}}


id: MONDO:0010515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meester-Loeys syndrome","secondary_identifiers":["DOID:0111861","UMLS:C4310811","MEDGEN:934778","NCIT:C187989","OMIM:300989"],"synonyms":[{"name":"MRLS","type":"exact"},{"name":"Meester-Loeys syndrome","type":"exact"},{"name":"Meester-Loeys syndrome; MRLS","type":"exact"}],"termid":"MONDO:0010515","xrefs":{"Monarch":{"xref_id":"0010515"}}}


id: PBO:0039491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A14, pseudogene","termid":"PBO:0039491"}


id: MONDO:0008793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiomatosis, diffuse Corticomeningeal, of Divry and van Bogaert","secondary_identifiers":["OMIM:206570","UMLS:C1859783","MESH:C536367","MEDGEN:347234"],"synonyms":[{"name":"Corticomeningeal angiomatosis, myelination of the white substance of the centrum ovale, hemianopsia and marbled skin","type":"related"},{"name":"Divry-Van Bogaert syndrome","type":"related"},{"name":"angiomatosis, diffuse Corticomeningeal, of Divry and van Bogaert","type":"exact"}],"termid":"MONDO:0008793","xrefs":{"Monarch":{"xref_id":"0008793"}}}


id: MONDO:0850312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant astrocytoma that is characterized by the presence of five or more mitoses per 10 high-power fields.","definition_xrefs":["DOID:0080854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocytic tumor","termid":"MONDO:0021636"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaplastic pleomorphic xanthoastrocytoma","secondary_identifiers":["NCIT:C129327","MEDGEN:924393","GARD:13624","UMLS:C4283858"],"termid":"MONDO:0850312","xrefs":{"Monarch":{"xref_id":"0850312"}}}


id: GO:0003694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with a plasmid, an extrachromosomal genetic element usually characterized as a covalently continuous double stranded DNA molecule found in bacteria and some other microorganisms.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete plasmid binding (obsolete GO:0003694)","synonyms":[{"name":"plasmid binding","type":"exact"},{"name":"plasmid-associated protein","type":"related"}],"termid":"GO:0003694"}


id: GO:0007180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta ligand binding to type II receptor (obsolete GO:0007180)","synonyms":[{"name":"TGF-beta ligand binding to type II receptor","type":"exact"},{"name":"TGFbeta ligand binding to type II receptor","type":"exact"},{"name":"transforming growth factor beta ligand binding to type II receptor","type":"exact"}],"termid":"GO:0007180"}


id: GO:0140403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the suppression of a host innate immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:21467214","PMID:30584105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"},{"relation_name":"is_a","term_name":"effector-mediated perturbation of host innate immune response by symbiont","termid":"GO:0140404"},{"relation_name":"is_a","term_name":"effector-mediated suppression of host defense response","termid":"GO:0140590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated suppression of host innate immune response","synonyms":[{"name":"effector dependent suppression of host immune innate response by symbiont","type":"exact"},{"name":"effector triggered suppression of host immune innate response by symbiont","type":"exact"},{"name":"effector-dependent suppression of host immune innate response by symbiont","type":"exact"},{"name":"effector-mediated suppression of host immune innate response by symbiont","type":"exact"},{"name":"effector-mediated suppression of host innate immune response by symbiont","type":"exact"},{"name":"effector-mediated suppression of host innate immunity","type":"exact"},{"name":"effector-triggered suppression of host immune innate response by symbiont","type":"exact"}],"termid":"GO:0140403"}


id: MONDO:0015660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sporadic fetal brain disruption sequence is a rare, non-syndromic, central nervous system malformation disorder characterized by severe microcephaly (average occipitofrontal circumference -5.8 SD), overlapping sutures, keel-like occipital bone prominence, scalp rugae with normal hair pattern and signs of neurological impairment. Brain imaging may show ventriculomegaly, cortical tissue deficit, and hydranencephaly.","definition_xrefs":["Orphanet:1665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system disorder","termid":"MONDO:0002602"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporadic fetal brain disruption sequence","secondary_identifiers":["GARD:18734","MEDGEN:1636968","SCTID:763717004","UMLS:C4706553"],"termid":"MONDO:0015660","xrefs":{"Monarch":{"xref_id":"0015660"}}}


id: PBO:0038511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily D member 2","termid":"PBO:0038511"}


id: GO:0046920
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to an acceptor molecule to form an alpha-(1->3) linkage.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosyltransferase activity","termid":"GO:0008417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"alpha-(1->3)-fucosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9603984","Reactome:R-HSA-9605609","Reactome:R-HSA-9605682","Reactome:R-HSA-9605644"],"synonyms":[{"name":"alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"alpha-(1,3)-fucosyltransferase activity","type":"exact"},{"name":"alpha-1,3-fucosyltransferase activity","type":"exact"}],"termid":"GO:0046920"}


id: PBO:0109025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHLA2 member of B7 family","termid":"PBO:0109025"}


id: PBO:0069716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 996, pseudogene","termid":"PBO:0069716"}


id: FYECO:0000139
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing glycerol and ethanol as the carbon sources, yeast extract and other components.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol and ethanol rich medium","synonyms":[{"name":"YCEG","type":"narrow"},{"name":"YEGES","type":"narrow"},{"name":"glycerol + ethanol YE","type":"related"},{"name":"glycerol and ethanol YE","type":"related"},{"name":"non-fermentable glycerol and ethanol rich medium","type":"exact"},{"name":"nonfermentable glycerol and ethanol rich medium","type":"exact"}],"termid":"FYECO:0000139"}


id: PBO:0070902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 10","termid":"PBO:0070902"}


id: MOD:01651
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces a natural, standard, encoded residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural residue","termid":"MOD:00009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural, standard, encoded residue removal","termid":"MOD:01651"}


id: MONDO:0019501
data:
  {"annotated_genes":["SJAG_00103"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013788"}]},"cv_name":"mondo","definition":"A syndromic diseae characterized by the association of sensorineural deafness (usually congenital) with retinitis pigmentosa and progressive vision loss.","definition_xrefs":["Orphanet:886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00103":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Usher syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1452641873","DOID:0050439","MedDRA:10063396","NORD:1816","MESH:D052245","ICD10CM:H35.5","MEDGEN:78754","NANDO:1200941","UMLS:C0271097","NCIT:C85217","OMIMPS:276900","GARD:7843"],"synonyms":[{"name":"Graefe-Usher syndrome","type":"related"},{"name":"Hallgren syndrome","type":"related"},{"name":"USH","type":"exact"},{"name":"Usher's syndrome","type":"exact"},{"name":"deafness-retinitis pigmentosa syndrome","type":"narrow"},{"name":"dystrophia retinae pigmentosa-dysostosis syndrome","type":"related"},{"name":"retinitis pigmentosa-deafness syndrome","type":"narrow"},{"name":"ush","type":"exact"}],"termid":"MONDO:0019501","terms_by_termid":{"MONDO:0013788":null},"xrefs":{"Monarch":{"xref_id":"0019501"}}}


id: PBO:0070069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 26, pseudogene","termid":"PBO:0070069"}


id: PBO:0080959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB2 pseudogene 1","termid":"PBO:0080959"}


id: MONDO:0020454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital complete agenesis of pericardium is a rare, mostly asymptomatic, congenital heart malformation characterized by the complete absence of the entire pericardium, or by the absence of either the right (uncommon) or left pericardium. It is occasionally associated with chest pain (common), dyspnea, dizziness, bradycardia and syncope, while exertional manifestations are rare. The disease is usually incidentally diagnosed during surgery or at autopsy.","definition_xrefs":["Orphanet:99129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pericardium anomaly","termid":"MONDO:0017300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital complete agenesis of pericardium","secondary_identifiers":["GARD:19666"],"termid":"MONDO:0020454","xrefs":{"Monarch":{"xref_id":"0020454"}}}


id: PBO:0063351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCNX4 divergent transcript","termid":"PBO:0063351"}


id: PBO:0086696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; localized to the membranes; gene expression regulated by copper levels","termid":"PBO:0086696"}


id: PBO:0053380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 307","termid":"PBO:0053380"}


id: PBO:0063818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology like domain family A member 3","termid":"PBO:0063818"}


id: PBO:0017012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin domain-like protein Blt1","termid":"PBO:0017012"}


id: PBO:0059261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L27","termid":"PBO:0059261"}


id: MONDO:0014389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, glycogen storage disorder characterized by polyglucosan accumulation in various tissues, manifesting with progressive proximal muscle weakness in the lower limbs and rapidly progressive, usually dilated, cardiomyopathy. Hepatic involvement and growth retardation may be associated. Early-onset immunodeficiency and autoinflammation, presenting with recurrent bacterial infections, have also been reported.","definition_xrefs":["Orphanet:397937"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuromuscular disease with dilated cardiomyopathy (obsolete MONDO:0016334)","termid":"MONDO:0016334"},{"relation_name":"excluded_subClassOf","term_name":"obsolete neurometabolic disease (obsolete MONDO:0019058)","termid":"MONDO:0019058"},{"relation_name":"is_a","term_name":"polyglucosan body myopathy","termid":"MONDO:0000192"},{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"polyglucosan body myopathy 1 with or without immunodeficiency","secondary_identifiers":["NANDO:2200766","UMLS:C4014605","OMIM:615895","MEDGEN:863042","GARD:17643"],"synonyms":[{"name":"PGBM1","type":"exact"},{"name":"polyglucosan body myopathy 1 with or without immunodeficiency","type":"exact"},{"name":"polyglucosan body myopathy type 1","type":"exact"},{"name":"polyglucosan body myopathy, early-onset, with or without immunodeficiency","type":"exact"}],"termid":"MONDO:0014389","xrefs":{"Monarch":{"xref_id":"0014389"}}}


id: MONDO:0035027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly-facial dysmorphism-ocular anomalies-multiple congenital anomalies syndrome","secondary_identifiers":["Orphanet:521445","MEDGEN:1830117","GARD:22145","UMLS:C5681443"],"termid":"MONDO:0035027","xrefs":{"Monarch":{"xref_id":"0035027"}}}


id: PBO:0046359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosulfine alpha pseudogene 1","termid":"PBO:0046359"}


id: GO:0002223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of C-type lectin to its receptor on the surface of a target cell, and resulting in cellular activation.","definition_xrefs":["GOC:add","ISBN:0781735149","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response activating cell surface receptor signaling pathway","termid":"GO:0002220"},{"relation_name":"is_a","term_name":"cellular response to lectin","termid":"GO:1990858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"stimulatory C-type lectin receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-5621481"],"synonyms":[{"name":"stimulatory C-type lectin receptor signalling pathway","type":"exact"},{"name":"stimulatory Ly49 family receptor signaling pathway","type":"narrow"}],"termid":"GO:0002223"}


id: MONDO:0021666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral or bacterial infection that affects the external, middle, or inner ear. It may follow an upper respiratory infection. Signs and symptoms include pain, ear discharge, ear fullness, hearing loss, vertigo, nausea, and vomiting.","definition_xrefs":["NCIT:C27193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"disorder of ear","termid":"MONDO:0021205"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ear infection","secondary_identifiers":["MEDGEN:147064","MESH:D010031","UMLS:C0699744"],"synonyms":[{"name":"Ear infection","type":"exact"},{"name":"otitis","type":"exact"}],"termid":"MONDO:0021666","xrefs":{"Monarch":{"xref_id":"0021666"}}}


id: PBO:0053098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 4A","termid":"PBO:0053098"}


id: MONDO:1010323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Entropion that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"entropion, non-human animal","secondary_identifiers":["OMIA:000337"],"termid":"MONDO:1010323","xrefs":{"Monarch":{"xref_id":"1010323"}}}


id: MOD:02014
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino group with a linoloylamino group.","direct_ancestors":[{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"},{"relation_name":"is_a","term_name":"linoloylated residue","termid":"MOD:02015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"N-linoloylated residue","termid":"MOD:02014"}


id: GO:0001854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C3d product of the complement cascade.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement binding","termid":"GO:0001848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"complement component C3d binding","termid":"GO:0001854"}


id: GO:0030324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the esophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax.","definition_xrefs":["UBERON:0002048","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"respiratory tube development","termid":"GO:0030323"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung development","termid":"GO:0030324"}


id: MONDO:0009244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Freesia Flowers, inability to smell","secondary_identifiers":["UMLS:C1856707","MEDGEN:383969","OMIM:229250"],"synonyms":[{"name":"Freesia Flowers, inability to smell","type":"exact"}],"termid":"MONDO:0009244","xrefs":{"Monarch":{"xref_id":"0009244"}}}


id: PBO:0091262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER alcohol acetyltransferase involved in intermembrane phospholipid transfer","termid":"PBO:0091262"}


id: PBO:0051040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy constant alpha 1","termid":"PBO:0051040"}


id: MONDO:0043207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urethral obstruction","termid":"MONDO:0001556"},{"relation_name":"is_a","term_name":"fetal lower urinary tract obstruction","termid":"MONDO:0018559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"urethral obstruction sequence","secondary_identifiers":["GARD:5428","MEDGEN:75568","MESH:C536477","SCTID:18241005","UMLS:C0265363"],"synonyms":[{"name":"EUOS","type":"related"},{"name":"early urethral obstruction sequence","type":"exact"},{"name":"renal dysplasia or hydronephrosis, oligohydramnios and subsequent lung hypoplasia due to urethral obstruction","type":"related"}],"termid":"MONDO:0043207","xrefs":{"Monarch":{"xref_id":"0043207"}}}


id: PBO:0039355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidohydrolase domain containing 1","termid":"PBO:0039355"}


id: PBO:0012857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosomal 3'-5' exoribonuclease, PH-like Mtr3","termid":"PBO:0012857"}


id: PBO:0004347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin-protein ligase (predicted)","termid":"PBO:0004347"}


id: PBO:0074942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 107","termid":"PBO:0074942"}


id: FYPO:0006165
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is branched, has more than one nucleus, and has a larger volume and is longer, than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multinucleate vegetative cell","termid":"FYPO:0000133"},{"relation_name":"is_a","term_name":"swollen elongated cell","termid":"FYPO:0001429"},{"relation_name":"is_a","term_name":"branched, elongated cell","termid":"FYPO:0001512"},{"relation_name":"is_a","term_name":"swollen multinucleate vegetative cell","termid":"FYPO:0004257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000005","FYPO:0000032","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"branched, swollen, elongated, multinucleate vegetative cell","synonyms":[{"name":"branched, elongated, swollen, multinucleate vegetative cell","type":"exact"},{"name":"branched, swollen, elongated, multinucleate cell during vegetative growth","type":"exact"},{"name":"branched, swollen, elongated, multinucleate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006165"}


id: MONDO:0019864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetrasomy 21 is an extremely rare autosomal anomaly resulting from the presence of 4 copies of chromosome 21, characterized by features of trisomy 21 including developmental delay/intellectual disability, muscular hypotonia, short neck with redundant skin, brachycephaly, microcephaly, flat face, epicanthus, upslanted palpebral fissures, small ears, protruding tongue, single transverse palmar crease, brachydactyly, hypoplastic iliac wings, together with additional features such as prematurity, intrauterine growth retardation, high and broad forehead, hypertelorism. Haematological malignancies are also associated and may occur earlier than in trisomy 21.","definition_xrefs":["Orphanet:96055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrasomy","termid":"MONDO:0030502"},{"relation_name":"is_a","term_name":"chromosome 21 disorder","termid":"MONDO:0700124"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrasomy 21","secondary_identifiers":["MEDGEN:1640242","SCTID:764690001","GARD:12480","UMLS:C4707057","icd11.foundation:1246904243"],"synonyms":[{"name":"Isochromosome 21","type":"exact"},{"name":"tetrasomy type 21","type":"exact"}],"termid":"MONDO:0019864","xrefs":{"Monarch":{"xref_id":"0019864"}}}


id: PBO:0080515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP family member 2","termid":"PBO:0080515"}


id: GO:0043323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte degranulation","termid":"GO:0043302"},{"relation_name":"is_a","term_name":"regulation of natural killer cell degranulation","termid":"GO:0043321"},{"relation_name":"is_a","term_name":"positive regulation of natural killer cell mediated cytotoxicity","termid":"GO:0045954"},{"relation_name":"positively_regulates","term_name":"natural killer cell degranulation","termid":"GO:0043320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell degranulation","synonyms":[{"name":"activation of natural killer cell degranulation","type":"narrow"},{"name":"positive regulation of NK cell degranulation","type":"exact"},{"name":"positive regulation of NK cell granule exocytosis","type":"exact"},{"name":"positive regulation of natural killer cell granule exocytosis","type":"exact"},{"name":"stimulation of natural killer cell degranulation","type":"narrow"},{"name":"up regulation of natural killer cell degranulation","type":"exact"},{"name":"up-regulation of natural killer cell degranulation","type":"exact"},{"name":"upregulation of natural killer cell degranulation","type":"exact"}],"termid":"GO:0043323"}


id: MONDO:0007511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ectodermal dysplasia, trichoodontoonychial type is a form of ectodermal dysplasia with hair, teeth and nail involvement characterized predominantly by hypodontia, hypotrichosis, delayed hair growth and brittle nails. Additionally, focal dermal hypoplasia, irregular hyperpigmentation, hypoplastic or absent nipples, amastia, hearing impairment, congenital hip dislocation and asthma have been associated. There have been no further descriptions in the literature since 1996.","definition_xrefs":["Orphanet:1818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia, trichoodontoonychial type","secondary_identifiers":["MESH:C565068","OMIM:129510","UMLS:C1851858","GARD:2055","SCTID:734018003","MEDGEN:338798"],"synonyms":[{"name":"ectodermal dysplasia trichoodontoonychial type","type":"related"},{"name":"ectodermal dysplasia, trichoodontoonychial type","type":"exact"}],"termid":"MONDO:0007511","xrefs":{"Monarch":{"xref_id":"0007511"}}}


id: PBO:0070551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 17","termid":"PBO:0070551"}


id: MOD:00592
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:272","PubMed:16046801","PubMed:12705581","PubMed:15732931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfonation of N-terminal","synonyms":[{"name":"CAF","type":"related"},{"name":"sulfonation of N-terminus","type":"related"}],"termid":"MOD:00592"}


id: MONDO:1011306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cardiovascular disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306","xrefs":{"Monarch":{"xref_id":"1011306"}}}


id: PBO:0000938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM22 inner membrane protein import complex subunit Tim40 (predicted)","termid":"PBO:0000938"}


id: GO:0102899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + dehydroabietadienol + NADPH + O2 = dehydroabietadiene-diol + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dehydroabietadienol hydroxylase activity (obsolete GO:0102899)","termid":"GO:0102899"}


id: MONDO:0019247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete combined hyperlipidemia (including acquired and inherited) (obsolete MONDO:0019247)","termid":"MONDO:0019247","xrefs":{"Monarch":{"xref_id":"0019247"}}}


id: PBO:0056329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 10","termid":"PBO:0056329"}


id: PR:Q9P7T4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mediator of replication checkpoint protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PomBase:MAH","PMID:14585996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mediator of replication checkpoint protein 1","termid":"PR:000027605"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of replication checkpoint protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC694.06c","secondary_identifiers":["UniProtKB:Q9P7T4","PR:000027606"],"synonyms":[{"name":"SPAC694.06C","type":"related"},{"name":"Spom972h-mrc1","type":"exact"}],"termid":"PR:Q9P7T4"}


id: GO:0075273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of zygosporangium development, a process in which a fruiting body called zygosporangium is formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of zygosporangium development","termid":"GO:0075272"},{"relation_name":"positively_regulates","term_name":"zygosporangium development","termid":"GO:0075271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of zygosporangium development","termid":"GO:0075273"}


id: PBO:0004778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V1 subunit F (predicted)","termid":"PBO:0004778"}


id: MOD:01645
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-proline.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-proline removal","termid":"MOD:01645"}


id: PBO:0040889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 15","termid":"PBO:0040889"}


id: MONDO:1010478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arrhythmogenic right ventricular cardiomyopathy that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arrhythmogenic right ventricular cardiomyopathy, non-human animal","termid":"MONDO:1010019"},{"relation_name":"is_a","term_name":"cardiomyopathy, dog","termid":"MONDO:1010441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrhythmogenic right ventricular cardiomyopathy, dog","secondary_identifiers":["OMIA:000878-9615"],"termid":"MONDO:1010478","xrefs":{"Monarch":{"xref_id":"1010478"}}}


id: MONDO:0011689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"dyslexia","termid":"MONDO:0005489"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyslexia, susceptibility to, 6","secondary_identifiers":["MEDGEN:335762","OMIM:606616","UMLS:C1847757"],"synonyms":[{"name":"DYX6","type":"exact"},{"name":"dyslexia, susceptibility to, 6","type":"exact"}],"termid":"MONDO:0011689","xrefs":{"Monarch":{"xref_id":"0011689"}}}


id: PBO:0080254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 17 pseudogene","termid":"PBO:0080254"}


id: PR:Q09866
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein mio that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00133","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C12G12.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.01c","secondary_identifiers":["UniProtKB:Q09866"],"synonyms":[{"name":"Spom972h-MIOS","type":"exact"}],"termid":"PR:Q09866"}


id: PBO:0091053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm2-8 complex subunit Lsm7","termid":"PBO:0091053"}


id: GO:0072101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor that results in the establishment of the ureteric bud such that there is a similar arrangement in form and relationship of parts along its anterior/posterior axis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete specification of ureteric bud anterior/posterior symmetry by BMP signaling pathway (obsolete GO:0072101)","synonyms":[{"name":"specification of ureteric bud anterior/posterior asymmetry by BMP signaling pathway","type":"exact"},{"name":"specification of ureteric bud anterior/posterior symmetry by BMP signalling pathway","type":"exact"}],"termid":"GO:0072101"}


id: GO:0033591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an L-ascorbic acid (vitamin C) stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to monosaccharide","termid":"GO:0034284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-ascorbic acid","synonyms":[{"name":"response to L-ascorbate","type":"exact"},{"name":"response to ascorbic acid","type":"broad"},{"name":"response to vitamin C","type":"exact"}],"termid":"GO:0033591"}


id: GO:0052719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages immediately 5' to an apurinic/apyrimidinic (AP; also called abasic) site within a ribonucleic acid molecule by creating internal breaks, generating a single-strand break with 5'-ribose phosphate and 3'-hydroxyl ends.","definition_xrefs":["PMID:19401441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism","termid":"GO:0016891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140098","GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"RNA-(apurinic or apyrimidinic site) endonuclease activity","synonyms":[{"name":"AP endoribonuclease activity","type":"exact"},{"name":"abasic endoribonuclease activity","type":"exact"},{"name":"apurinic endoribonuclease activity","type":"narrow"},{"name":"apyrimidinic endoribonuclease activity","type":"narrow"}],"termid":"GO:0052719"}


id: _global:during_which_ends
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"_global:temporally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"during_which_ends","secondary_identifiers":["RO:0002084"],"termid":"_global:during_which_ends"}


id: MONDO:0006949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Colloid or hyaline bodies lying beneath the retinal pigment epithelium. They may occur either secondary to changes in the choroid that affect the pigment epithelium or as an autosomal dominant disorder of the retinal pigment epithelium.","definition_xrefs":["MESH:D015593"],"direct_ancestors":[{"relation_name":"is_a","term_name":"degeneration of macula and posterior pole","termid":"MONDO:0002175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal drusen","secondary_identifiers":["EFO:1001155","SCTID:247153005","DOID:2569","MedDRA:10062776","ICD9:362.57","MEDGEN:20549","UMLS:C0035312"],"termid":"MONDO:0006949","xrefs":{"Monarch":{"xref_id":"0006949"}}}


id: MOD:01423
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a palmitoleyl group.","definition_xrefs":["Unimod:431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"palmitoleylated residue","termid":"MOD:01423"}


id: MONDO:1010131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A debilitating condition characterized by a fibrocollagenous membrane encasing the small intestine, resulting in recurrent small bowel obstructions.","definition_xrefs":["PMID:39631118","PMID:30065556","PMID:24133081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal obstruction","termid":"MONDO:0004565"},{"relation_name":"is_a","term_name":"peritonitis","termid":"MONDO:1010128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"encapsulating peritoneal sclerosis","secondary_identifiers":["MEDGEN:439295","UMLS:C2717860"],"synonyms":[{"name":"EPS","type":"exact"},{"name":"abdominal cocoon syndrome","type":"exact"},{"name":"peritonitis chronica fibrosa incapsulata","type":"exact"},{"name":"sclerosing encapsulating peritonitis","type":"exact"}],"termid":"MONDO:1010131","xrefs":{"Monarch":{"xref_id":"1010131"}}}


id: PBO:0068487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 70, pseudogene","termid":"PBO:0068487"}


id: PBO:0013067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan, localizing to double strand breaks Dbl7","termid":"PBO:0013067"}


id: GO:0019434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sophorosyloxydocosanoate, 13-sophorosyloxydocosanoate 6',6''-diacetate, an aromatic hydrocarbon.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sophorosyloxydocosanoate metabolic process","synonyms":[{"name":"sophorosyloxydocosanoate metabolism","type":"exact"}],"termid":"GO:0019434"}


id: GO:0051134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer T cell activation.","definition_xrefs":["PMID:12154375","ISBN:0781735149","PMID:9133426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell activation","termid":"GO:0046636"},{"relation_name":"is_a","term_name":"regulation of NK T cell activation","termid":"GO:0051133"},{"relation_name":"negatively_regulates","term_name":"NK T cell activation","termid":"GO:0051132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of NK T cell activation","synonyms":[{"name":"down regulation of NK T cell activation","type":"exact"},{"name":"down-regulation of NK T cell activation","type":"exact"},{"name":"downregulation of NK T cell activation","type":"exact"},{"name":"inhibition of NK T cell activation","type":"narrow"},{"name":"negative regulation of NK T lymphocyte activation","type":"exact"},{"name":"negative regulation of NK T-cell activation","type":"exact"},{"name":"negative regulation of NK T-lymphocyte activation","type":"exact"},{"name":"negative regulation of NKT cell activation","type":"exact"},{"name":"negative regulation of NT cell activation","type":"exact"},{"name":"negative regulation of natural T cell activation","type":"exact"},{"name":"negative regulation of natural killer T cell activation","type":"exact"}],"termid":"GO:0051134"}


id: PBO:0054081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1431","termid":"PBO:0054081"}


id: GO:0019686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a purine nucleoside is synthesized from another purine nucleoside.","definition_xrefs":["ISBN:0471394831","ISBN:0306444747","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing small molecule interconversion","termid":"GO:0015949"},{"relation_name":"is_a","term_name":"purine nucleoside metabolic process","termid":"GO:0042278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine nucleoside interconversion","termid":"GO:0019686"}


id: GO:0044835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of H2 (dihydrogen) which involve a nitrogenase activity as one of the steps. This process is observed in cyanobacteria.","definition_xrefs":["GOC:mengo_curators","PMID:22128188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrogen biosynthetic process","termid":"GO:1902422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrogen generation via nitrogenase","termid":"GO:0044835"}


id: PBO:0069815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1101, pseudogene","termid":"PBO:0069815"}


id: GO:1905605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases blood-brain barrier permeability, the quality of the blood-brain barrier that allows for a controlled passage of substances (e.g. macromolecules, small molecules, ions) into and out of the brain.","definition_xrefs":["GO_REF:0000058","GOC:als","GOC:aruk","GOC:bc","GOC:TermGenie","PMID:22524708","PMID:30280653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vascular permeability","termid":"GO:0043117"},{"relation_name":"is_a","term_name":"regulation of blood-brain barrier permeability","termid":"GO:1905603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood-brain barrier permeability","synonyms":[{"name":"activation of maintenance of permeability of BBB","type":"narrow"},{"name":"activation of maintenance of permeability of blood-brain barrier","type":"narrow"},{"name":"positive regulation of BBB permeability","type":"exact"},{"name":"positive regulation of blood/brain barrier permeability","type":"exact"},{"name":"up-regulation of BBB permeability","type":"exact"},{"name":"up-regulation of blood-brain barrier permeability","type":"exact"},{"name":"up-regulation of blood/brain barrier permeability","type":"exact"},{"name":"upregulation of BBB permeability","type":"exact"},{"name":"upregulation of blood-brain barrier permeability","type":"exact"},{"name":"upregulation of blood/brain barrier permeability","type":"exact"}],"termid":"GO:1905605"}


id: PR:Q09154
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome b-c1 complex subunit Rieske, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10134:SF0","PRO:DNx","OMA:SCHPO03211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b-c1 complex subunit Rieske, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.06","secondary_identifiers":["UniProtKB:Q09154"],"synonyms":[{"name":"RISP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-UQCRFS1","type":"exact"},{"name":"complex III subunit 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rieske iron-sulfur protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquinol-cytochrome c reductase iron-sulfur subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09154"}


id: PBO:0029785
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_septated_vegetative_cell_with_abnormal_cell_morphology","termid":"PBO:0029785"}


id: FYPO:0002794
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the number, distribution, or morphology of all or part of the vacuole(s) is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal vacuole","synonyms":[{"name":"abnormal vacuole physical object quality","type":"exact"},{"name":"abnormal vacuoles","type":"exact"}],"termid":"FYPO:0002794"}


id: GO:0046252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of toluene, a volatile monoaromatic hydrocarbon found in crude petroleum and petroleum products.","definition_xrefs":["GOC:ai","PMID:6508079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene metabolic process","termid":"GO:0018970"},{"relation_name":"is_a","term_name":"hydrocarbon biosynthetic process","termid":"GO:0120251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"toluene biosynthetic process","synonyms":[{"name":"toluene anabolism","type":"exact"},{"name":"toluene biosynthesis","type":"exact"},{"name":"toluene formation","type":"exact"},{"name":"toluene synthesis","type":"exact"}],"termid":"GO:0046252"}


id: FYPO:0003841
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone is decreased. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["PomBase:mah","GO:1902967","GO:1990023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle","termid":"FYPO:0002825"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle midzone","termid":"FYPO:0004883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle midzone","synonyms":[{"name":"decreased protein localisation to mitotic spindle midzone","type":"exact"},{"name":"decreased protein localization to mitotic spindle midzone during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to spindle midzone during mitosis","type":"exact"},{"name":"decreased protein localization to spindle midzone during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitotic spindle midzone","type":"exact"}],"termid":"FYPO:0003841"}


id: PBO:0069810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1096, pseudogene","termid":"PBO:0069810"}


id: GO:0032581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of peroxisome organization in which assembly or arrangement of constituent parts takes place in the endoplasmic reticulum.","definition_xrefs":["PMID:17646399","PMID:16717127","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome organization","termid":"GO:0007031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007031"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007031"],"is_obsolete":false,"name":"ER-dependent peroxisome organization","synonyms":[{"name":"ER-dependent peroxisome biogenesis","type":"related"},{"name":"ER-dependent peroxisome organisation","type":"exact"},{"name":"endoplasmic reticulum-dependent peroxisome organization","type":"exact"}],"termid":"GO:0032581"}


id: PBO:0042173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular communication network factor 3","termid":"PBO:0042173"}


id: PBO:0081895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 846","termid":"PBO:0081895"}


id: PBO:0059644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 10","termid":"PBO:0059644"}


id: GO:0001978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates blood pressure by sensing the amount of stretch occurring in large arteries and responding to the input via central nervous system control.","definition_xrefs":["GOC:dph","ISBN:0721643949","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by baroreceptor feedback","termid":"GO:0003025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by carotid sinus baroreceptor feedback","synonyms":[{"name":"baroreceptor feedback control of blood pressure","type":"related"},{"name":"baroreceptor pressure buffer system","type":"related"},{"name":"carotid sinus baroreceptor feedback regulation of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0001978"}


id: GO:0036225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of vitamin B1 (also called thiamin and thiamine).","definition_xrefs":["GOC:al","Wikipedia:Thiamine"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin B1 starvation","synonyms":[{"name":"cellular response to thiamin starvation","type":"exact"},{"name":"cellular response to vitamin B1 deprivation","type":"exact"}],"termid":"GO:0036225"}


id: PBO:0045916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 11","termid":"PBO:0045916"}


id: PBO:0074061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A38 pseudogene 1","termid":"PBO:0074061"}


id: PBO:0013110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead transcription factor Fkh2","termid":"PBO:0013110"}


id: MONDO:0042491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic process that affects the squamous epithelium of the cervix. It is classified as cervical squamous intraepithelial neoplasia 1, 2, or 3, according to the degree of squamous cell maturation and cellular atypia, and the number of mitotic figures.","definition_xrefs":["NCIT:C7346"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"dysplasia of cervix","termid":"MONDO:0006736"},{"relation_name":"is_a","term_name":"uterine cervix neoplasm","termid":"MONDO:0021230"},{"relation_name":"is_a","term_name":"cervical intraepithelial neoplasia","termid":"MONDO:0022394"},{"relation_name":"is_a","term_name":"squamous cell intraepithelial neoplasia","termid":"MONDO:0024475"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical squamous intraepithelial neoplasia","secondary_identifiers":["MEDGEN:234116","MESH:D065310","UMLS:C1332922"],"synonyms":[{"name":"CIN","type":"exact"},{"name":"cervical sil","type":"exact"},{"name":"cervical squamous intraepithelial lesion","type":"exact"},{"name":"cervical squamous intraepithelial neoplasia","type":"exact"},{"name":"cervix squamous intraepithelial lesion","type":"exact"},{"name":"cervix uteri sil","type":"exact"},{"name":"cervix uteri squamous intraepithelial lesion","type":"exact"},{"name":"squamous intraepithelial lesion of cervix","type":"exact"},{"name":"squamous intraepithelial lesion of cervix uteri","type":"exact"},{"name":"squamous intraepithelial lesion of the cervix","type":"exact"},{"name":"squamous intraepithelial lesion of the cervix uteri","type":"exact"},{"name":"squamous intraepithelial lesion of the uterine cervix","type":"exact"},{"name":"squamous intraepithelial lesion of uterine cervix","type":"exact"},{"name":"uterine cervix sil","type":"exact"},{"name":"uterine cervix squamous intraepithelial lesion","type":"exact"}],"termid":"MONDO:0042491","xrefs":{"Monarch":{"xref_id":"0042491"}}}


id: PBO:0073952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 1","termid":"PBO:0073952"}


id: GO:0140252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein at the postsynapse.","definition_xrefs":["PMID:17062563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation protein catabolic process at synapse","termid":"GO:0140250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation protein catabolic process at postsynapse","termid":"GO:0140252"}


id: PBO:0087561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex; role in proteolysis of spindle positioning protein Kar9, DNA repair proteins Rad52p and Rad57p; stimulated by SUMO-modified substrates; contains a C-terminal RING domain; forms nuclear foci upon DNA replication stress; required for maintenance of genome integrity like human ortholog RNF","termid":"PBO:0087561"}


id: GO:0031859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a platelet activating factor receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"platelet activating factor receptor binding","synonyms":[{"name":"platelet activating factor receptor ligand","type":"narrow"}],"termid":"GO:0031859"}


id: PBO:0004494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTR family peptide transporter (predicted)","termid":"PBO:0004494"}


id: PBO:0034154
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-innervates","termid":"PBO:0034154"}


id: PBO:0065147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protamine 3","termid":"PBO:0065147"}


id: GO:0042464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Compensating for the two-fold variation in X:autosome chromosome ratios between sexes by an inactivation of a proportion of genes on both of the X chromosomes of the XX sex, leading to a decrease, of half, of the levels of gene expression from these chromosomes. An example of this process is found in Caenorhabditis elegans.","definition_xrefs":["GOC:mr","PMID:11102361","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex-chromosome dosage compensation","termid":"GO:0007549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"dosage compensation by hypoactivation of X chromosome","secondary_identifiers":["Wikipedia:XY_sex-determination_system"],"termid":"GO:0042464"}


id: GO:1990876
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side of the nuclear pore complex (NPC) that faces the cytoplasm.","definition_xrefs":["PMID:8422679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005643"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0005643","GO:0032991"],"is_obsolete":false,"name":"cytoplasmic side of nuclear pore","synonyms":[{"name":"cytoplasmic side of NPC","type":"exact"},{"name":"cytoplasmic side of nuclear pore complex","type":"exact"},{"name":"cytoplasmic side of nucleopore","type":"exact"}],"termid":"GO:1990876"}


id: PBO:0083614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dynamin-related GTPase involved in mitochondrial organization; required for mitochondrial fission and inheritance; self assembles on the cytoplasmic face of mitochondrial tubules at sites where division will occur; participates in endocytosis and regulates peroxisome fission along with Vps1p; mutants in the human ortholog DNM1L, which mediates mitochondrial fission, peroxisomal division, autophagy, and mitophagy, are associated with slowly progressive infantile encephalopathy","termid":"PBO:0083614"}


id: PBO:0036468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-F0 ATPase synthase peripheral stalk assembly factor Ina17 (predicted)","termid":"PBO:0036468"}


id: MONDO:0010256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-syndromic X-linked intellectual disability in which the cause of the disease is a mutation in the IL1RAPL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 21","secondary_identifiers":["DOID:0112022","GARD:22669","MEDGEN:1790509","OMIM:300143","UMLS:C5551510"],"synonyms":[{"name":"IL1RAPL1 non-syndromic X-linked intellectual disability","type":"exact"},{"name":"MRX21","type":"related"},{"name":"intellectual developmental disorder, X-linked 21, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked 21","type":"exact"},{"name":"intellectual disability, X-linked 34","type":"related"},{"name":"intellectual disability, X-linked type 21","type":"exact"},{"name":"mental retardation, X-linked 21","type":"related"},{"name":"mental retardation, X-linked 34","type":"related"},{"name":"mental retardation, X-linked type 21","type":"exact"},{"name":"non-syndromic X-linked intellectual disability caused by mutation in IL1RAPL1","type":"exact"}],"termid":"MONDO:0010256","xrefs":{"Monarch":{"xref_id":"0010256"}}}


id: MONDO:0012154
data:
  {"annotated_genes":["SJAG_04553"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87873],"is_not":false,"summary":null,"term":"MONDO:0012154"}]},"cv_name":"mondo","definition":"Any myopia in which the cause of the disease is a mutation in the SCO2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C536105","OMIM:608908","UMLS:C1837148","GARD:9937","MEDGEN:324696"],"synonyms":[{"name":"MYP6","type":"related"},{"name":"SCO2 myopia (disease)","type":"exact"},{"name":"myopia (disease) caused by mutation in SCO2","type":"exact"},{"name":"myopia 6","type":"exact"},{"name":"myopia type 6","type":"exact"},{"name":"myopia, susceptibility to","type":"related"}],"termid":"MONDO:0012154","terms_by_termid":{"MONDO:0012154":null},"xrefs":{"Monarch":{"xref_id":"0012154"}}}


id: PBO:0078619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM67 antisense RNA 1","termid":"PBO:0078619"}


id: PATO:0000068
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"quality","termid":"PATO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative","termid":"PATO:0000068"}


id: GO:0045344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class I.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of MHC class I biosynthetic process","termid":"GO:0045343"},{"relation_name":"negatively_regulates","term_name":"MHC class I biosynthetic process","termid":"GO:0045341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of MHC class I biosynthetic process","synonyms":[{"name":"down regulation of MHC class I biosynthetic process","type":"exact"},{"name":"down-regulation of MHC class I biosynthetic process","type":"exact"},{"name":"downregulation of MHC class I biosynthetic process","type":"exact"},{"name":"inhibition of MHC class I biosynthetic process","type":"narrow"},{"name":"negative regulation of MHC class I anabolism","type":"exact"},{"name":"negative regulation of MHC class I biosynthesis","type":"exact"},{"name":"negative regulation of MHC class I formation","type":"exact"},{"name":"negative regulation of MHC class I synthesis","type":"exact"},{"name":"negative regulation of major histocompatibility complex class I biosynthesis","type":"exact"},{"name":"negative regulation of major histocompatibility complex class I biosynthetic process","type":"exact"}],"termid":"GO:0045344"}


id: PBO:0078678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 11-1","termid":"PBO:0078678"}


id: FYPO:0005206
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle when cells are shifted from one nitrogen source to another. Normally, cell division is delayed upon shifting from a poor to a rich nitrogen source, and accelerated upon shifting from a rich to a poor nitrogen source.","definition_xrefs":["PMID:872891","PomBase:mah","PMID:21965528","PMID:689088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation upon nitrogen source shift","synonyms":[{"name":"abnormal cell cycle regulation upon nitrogen source shift","type":"exact"},{"name":"abnormal cell cycle regulation upon nitrogen source shift during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to nitrogen source shift","type":"exact"},{"name":"abnormal mitotic cell cycle regulation upon nitrogen source shift during vegetative growth","type":"exact"}],"termid":"FYPO:0005206"}


id: PATO:0002459
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a sepal,","definition_xrefs":["PATOC:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sepal-like","termid":"PATO:0002459"}


id: PBO:0047884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(5)(p14)","termid":"PBO:0047884"}


id: GO:0071219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of bacterial origin such as peptides derived from bacterial flagellin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to molecule of bacterial origin","termid":"GO:0002237"},{"relation_name":"is_a","term_name":"cellular response to biotic stimulus","termid":"GO:0071216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to molecule of bacterial origin","synonyms":[{"name":"cellular response to bacteria associated molecule","type":"exact"},{"name":"cellular response to bacterial associated molecule","type":"exact"},{"name":"cellular response to bacterium associated molecule","type":"exact"}],"termid":"GO:0071219"}


id: GO:0042991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a transcription factor from the cytoplasm to the nucleus.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor import into nucleus (obsolete GO:0042991)","synonyms":[{"name":"transcription factor import into cell nucleus","type":"exact"},{"name":"transcription factor transport from cytoplasm to nucleus","type":"exact"},{"name":"transcription factor-nucleus import","type":"exact"}],"termid":"GO:0042991"}


id: GO:0120332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process involved in maintaining the steady-state number of cells within a population of free-living cells, such as the bacteria, in the mouth.","definition_xrefs":["PMID:31882545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"},{"relation_name":"is_a","term_name":"host-mediated perturbation of symbiont process","termid":"GO:0051851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host-mediated regulation of oral microbiota composition","synonyms":[{"name":"host-induced regulation of oral microbiota composition","type":"related"}],"termid":"GO:0120332"}


id: MONDO:0026765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"congenital disorder of glycosylation, type IIr","secondary_identifiers":["OMIM:301045","UMLS:C5393313","MEDGEN:1717186"],"synonyms":[{"name":"CDG IIr","type":"related"},{"name":"CDG2R","type":"related"},{"name":"CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIr","type":"related"},{"name":"congenital disorder of glycosylation, type IIr, X-linked recessive","type":"exact"}],"termid":"MONDO:0026765","xrefs":{"Monarch":{"xref_id":"0026765"}}}


id: PBO:0077360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 100","termid":"PBO:0077360"}


id: PATO:0002274
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Multicolored quality inhering in a bearer by virtue of the bearer's being dappled with spots, patches, or blotches of different colors.","direct_ancestors":[{"relation_name":"is_a","term_name":"multi-colored","termid":"PATO:0001533"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mottled","termid":"PATO:0002274"}


id: MONDO:0022171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare condition characterized by the secretion of colored sweat, caused by the deposition of lipofuscin in the sweat glands. Usually chromhidrosis affects the apocrine glands, mainly on the face and underarms.","definition_xrefs":["Wikipedia:Chromhidrosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apocrine sweat gland disorder","termid":"MONDO:0024467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"chromhidrosis","secondary_identifiers":["SCTID:26147006","UMLS:C0263473","MEDGEN:82667","ICD10CM:L75.1","icd11.foundation:864449620","ICD9:705.89"],"synonyms":[{"name":"chromhidrosis","type":"exact"},{"name":"secretion of colored sweat","type":"related"},{"name":"secretion of coloured sweat","type":"related"}],"termid":"MONDO:0022171","xrefs":{"Monarch":{"xref_id":"0022171"}}}


id: PBO:0061063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium/potassium transporting ATPase interacting 2","termid":"PBO:0061063"}


id: GO:0048642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle tissue development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of striated muscle tissue development","termid":"GO:0045843"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle tissue development","termid":"GO:0048641"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle tissue development","synonyms":[{"name":"down regulation of skeletal muscle development","type":"exact"},{"name":"down-regulation of skeletal muscle development","type":"exact"},{"name":"downregulation of skeletal muscle development","type":"exact"},{"name":"inhibition of skeletal muscle development","type":"narrow"}],"termid":"GO:0048642"}


id: GO:1990090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nerve growth factor stimulus.","definition_xrefs":["PMID:22399805","Wikipedia:Nerve_growth_factor"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"},{"relation_name":"is_a","term_name":"response to nerve growth factor","termid":"GO:1990089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nerve growth factor stimulus","synonyms":[{"name":"cellular response to NGF","type":"exact"}],"termid":"GO:1990090"}


id: GO:0033781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + H+ + NADPH + O2 = (24S)-24-hydroxycholesterol + H2O + NADP+.","definition_xrefs":["RHEA:22716","EC:1.14.14.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cholesterol 24-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R07207","MetaCyc:1.14.13.98-RXN","Reactome:R-HSA-192061"],"synonyms":[{"name":"CYP46","type":"related"},{"name":"CYP46A1","type":"related"},{"name":"cholesterol 24-monooxygenase activity","type":"related"},{"name":"cholesterol 24S-hydroxylase activity","type":"related"},{"name":"cholesterol,NADPH:oxygen oxidoreductase (24-hydroxylating) activity","type":"related"},{"name":"cytochrome P450 46A1","type":"related"}],"termid":"GO:0033781"}


id: PBO:0079676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 W pseudogene 1","termid":"PBO:0079676"}


id: PBO:0110357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENR pseudogene 1","termid":"PBO:0110357"}


id: PBO:0039411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC15 pseudogene 1","termid":"PBO:0039411"}


id: FYPO:0007119
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable when cells the population are subject to starvation for one or more amino acids.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of viability upon nutrient depletion","termid":"FYPO:0000244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"loss of viability upon amino acid starvation","synonyms":[{"name":"decreased viability upon amino acid starvation","type":"exact"},{"name":"loss of cell population viability upon amino acid starvation","type":"exact"},{"name":"loss of viability upon amino acid depletion","type":"exact"},{"name":"loss of viability upon amino acid deprivation","type":"exact"},{"name":"loss of viability upon amino acid limitation","type":"exact"},{"name":"reduced viability upon amino acid starvation","type":"exact"}],"termid":"FYPO:0007119"}


id: GO:0043757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: ATP + adenosylcobyric acid + (R)-1-aminopropan-2-yl phosphate = ADP + phosphate + adenosylcobinamide phosphate, and ATP + adenosylcobyric acid + (R)-1-aminopropan-2-ol = ADP + phosphate + adenosylcobinamide.","definition_xrefs":["EC:6.3.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"adenosylcobinamide-phosphate synthase activity","secondary_identifiers":["MetaCyc:RXN-6261","RHEA:21896"],"synonyms":[{"name":"AdoCbi-P synthase activity","type":"related"},{"name":"CbiB","type":"related"},{"name":"adenosylcobyric acid:(R)-1-aminopropan-2-yl phosphate ligase (ADP-forming)","type":"exact"}],"termid":"GO:0043757"}


id: GO:0061643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuron growth cone is directed to a specific target site in response to a repulsive chemical cue.","definition_xrefs":["GOC:krc","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative chemotaxis","termid":"GO:0050919"},{"relation_name":"part_of","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion of axon","termid":"GO:0061643"}


id: MONDO:0024857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An immature teratoma that develops as a primary tumor in an anatomic site other than the testis or ovary.","definition_xrefs":["NCIT:C8884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant teratoma","termid":"MONDO:0003514"},{"relation_name":"is_a","term_name":"extragonadal nonseminomatous germ cell tumor","termid":"MONDO:0003578"},{"relation_name":"is_a","term_name":"immature teratoma","termid":"MONDO:0024746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"immature extragonadal teratoma","secondary_identifiers":["MEDGEN:167781","UMLS:C0855163"],"synonyms":[{"name":"extragonadal primary malignant teratoma","type":"exact"},{"name":"immature extragonadal teratoma","type":"exact"},{"name":"malignant extragonadal teratoma","type":"exact"},{"name":"primary malignant extragonadal teratoma","type":"exact"}],"termid":"MONDO:0024857","xrefs":{"Monarch":{"xref_id":"0024857"}}}


id: MONDO:0007308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant Charcot-Marie-Tooth disease type 2A1 (CMT2A1) is a form of axonal Charcot-Marie-Tooth disease, a peripheral sensorimotor neuropathy. CMT2A presents with a more prominent muscle weakness in lower than upper limbs and frequent postural tremor.","definition_xrefs":["Orphanet:99946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 2A1","secondary_identifiers":["NCIT:C134952","SCTID:717016001","OMIM:118210","UMLS:C1861678","MESH:C566138","DOID:0110154","GARD:1248","NCIT:C150609","icd11.foundation:2087067372","MEDGEN:350076"],"synonyms":[{"name":"CMT 2A","type":"related"},{"name":"CMT2A","type":"exact"},{"name":"CMT2A1","type":"exact"},{"name":"Charcot Marie Tooth disease type 2A","type":"related"},{"name":"Charcot-Marie-Tooth disease neuronal type 2A1","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2 caused by mutation in KIF1B","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2A","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2A1","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal dominant, type 2A1","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2A","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2A1","type":"related"},{"name":"Charcot-Marie-Tooth disease, neuronal, type 2A","type":"related"},{"name":"Charcot-Marie-Tooth disease, neuronal, type 2A1","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 2A1","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 2A1","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 2A1","type":"related"},{"name":"HMSN IIA","type":"related"},{"name":"HMSN IIA1","type":"exact"},{"name":"HMSN IIa1","type":"related"},{"name":"HMSN2A1","type":"exact"},{"name":"KIF1B Charcot-Marie-Tooth disease type 2","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease axonal type 2A1","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2A1","type":"related"},{"name":"hereditary motor and sensory neuropathy 2 A","type":"related"},{"name":"hereditary motor and sensory neuropathy IIA1","type":"exact"},{"name":"hereditary motor and sensory neuropathy IIa1","type":"related"}],"termid":"MONDO:0007308","xrefs":{"Monarch":{"xref_id":"0007308"}}}


id: GO:0031974
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id: MONDO:0003708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive, high-grade and poorly differentiated carcinoma with neuroendocrine differentiation that arises from the extrahepatic bile ducts. It is characterized by the presence of malignant small cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"extrahepatic bile duct adenocarcinoma","termid":"MONDO:0002665"},{"relation_name":"is_a","term_name":"liver neuroendocrine carcinoma","termid":"MONDO:0015072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"extrahepatic bile duct small cell adenocarcinoma","secondary_identifiers":["NCIT:C5845","DOID:5926","MEDGEN:277648","UMLS:C1335979"],"synonyms":[{"name":"Oat cell carcinoma of extrahepatic bile duct","type":"exact"},{"name":"Oat cell carcinoma of the extrahepatic bile duct","type":"exact"},{"name":"Oat cell extrahepatic bile duct carcinoma","type":"exact"},{"name":"extrahepatic bile duct small cell NEC","type":"exact"},{"name":"extrahepatic bile duct small cell neuroendocrine carcinoma","type":"exact"},{"name":"small cell adenocarcinoma of extrahepatic bile duct","type":"exact"},{"name":"small cell adenocarcinoma of the extrahepatic bile duct","type":"exact"},{"name":"small cell extrahepatic bile duct carcinoma","type":"exact"},{"name":"small cell extrahepatic bile duct neuroendocrine carcinoma","type":"exact"}],"termid":"MONDO:0003708","xrefs":{"Monarch":{"xref_id":"0003708"}}}


id: MONDO:0018961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial melanoma (FM) is a rare inherited form of melanoma characterized by development of histologically confirmed melanoma in two first degrees relatives or more relatives in an affected family.","definition_xrefs":["Orphanet:618"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited skin tumor (obsolete MONDO:0015950)","termid":"MONDO:0015950"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"excluded_subClassOf","term_name":"obsolete pigmented palpebral tumor (obsolete MONDO:0020177)","termid":"MONDO:0020177"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial melanoma","secondary_identifiers":["MEDGEN:268851","NCIT:C8498","DOID:6846","GARD:3460","UMLS:C1512419"],"synonyms":[{"name":"hereditary melanoma (disease)","type":"exact"}],"termid":"MONDO:0018961","xrefs":{"Monarch":{"xref_id":"0018961"}}}


id: MONDO:0007259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniofaciofrontodigital is a rare multiple congenital anomalies syndrome characterized by mild intellectual disability, short stature, cardiac anomalies, mild dysmorphic features (macrocephaly, prominent forehead, hypertelorism, exophthalmos), cutis laxa, joint hyperlaxity, wrinkled palms and soles and skeletal anomalies (sella turcica, wide ribs and small vertebral bodies).","definition_xrefs":["Orphanet:363705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"inherited cutis laxa","termid":"MONDO:0100237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniofaciofrontodigital syndrome","secondary_identifiers":["MEDGEN:393947","MESH:C567298","SCTID:763320005","UMLS:C2676032","GARD:17571","OMIM:114620"],"synonyms":[{"name":"Cantu craniofaciofrontodigital syndrome","type":"exact"},{"name":"craniofaciofrontodigital syndrome","type":"exact"}],"termid":"MONDO:0007259","xrefs":{"Monarch":{"xref_id":"0007259"}}}


id: PBO:0071980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 9","termid":"PBO:0071980"}


id: GO:1905683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The disaggregation of a peroxisome into its constituent components.","definition_xrefs":["GO_REF:0000079","GOC:pr","GOC:TermGenie","GOC:autophagy"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisome disassembly (obsolete GO:1905683)","termid":"GO:1905683"}


id: PBO:0015236
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CwP1 Partner","termid":"PBO:0015236"}


id: GO:0050732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein phosphorylation","termid":"GO:0001933"},{"relation_name":"is_a","term_name":"regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050730"},{"relation_name":"negatively_regulates","term_name":"peptidyl-tyrosine phosphorylation","termid":"GO:0018108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-tyrosine phosphorylation","synonyms":[{"name":"down regulation of peptidyl-tyrosine phosphorylation","type":"exact"},{"name":"down-regulation of peptidyl-tyrosine phosphorylation","type":"exact"},{"name":"downregulation of peptidyl-tyrosine phosphorylation","type":"exact"},{"name":"inhibition of peptidyl-tyrosine phosphorylation","type":"narrow"}],"termid":"GO:0050732"}


id: PBO:0083477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene STE3","termid":"PBO:0083477"}


id: MONDO:0009958
data:
  {"annotated_genes":["SJAG_00326"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88136],"is_not":false,"summary":null,"term":"MONDO:0009958"}]},"cv_name":"mondo","definition":"A very rare, clinically variable, multisystemic metabolic disease, characterized by anosmia, early-onset retinitis pigmentosa and possible neurological manifestations, including neuropathy, and cerebellar ataxia, deafness, ichthyosis, skeletal abnormalities, and cardiac arrhythmia. It is characterized biochemically by accumulation of phytanic acid in plasma and tissues.","definition_xrefs":["Orphanet:773"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive congenital ichthyosis","termid":"MONDO:0017265"},{"relation_name":"excluded_subClassOf","term_name":"obsolete autosomal ichthyosis syndrome with prominent neurologics signs (obsolete MONDO:0017272)","termid":"MONDO:0017272"},{"relation_name":"excluded_subClassOf","term_name":"obsolete disorder of peroxisomal alpha-, beta- and omega-oxidation (obsolete MONDO:0017753)","termid":"MONDO:0017753"},{"relation_name":"excluded_subClassOf","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive metabolic cerebellar ataxia","termid":"MONDO:0020044"},{"relation_name":"excluded_subClassOf","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"excluded_subClassOf","term_name":"obsolete cataract associated with a metabolic disease (obsolete MONDO:0020228)","termid":"MONDO:0020228"},{"relation_name":"excluded_subClassOf","term_name":"obsolete metabolic disease with pigmentary retinitis (obsolete MONDO:0020281)","termid":"MONDO:0020281"},{"relation_name":"is_a","term_name":"phytanoyl-CoA hydroxylase deficiency","termid":"MONDO:0100258"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00326":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005066"],"is_obsolete":false,"name":"adult Refsum disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:600964","NORD:1654","ICD10CM:G60.1","NANDO:1200769","UMLS:C0034960","MEDGEN:11161","ICD9CM:356.3","MESH:C535517","NANDO:2200577","SCTID:25362006","OMIM:266500","DOID:10582","ICD9:272.8","MedDRA:10038275","GARD:5691","MESH:D012035"],"synonyms":[{"name":"DOC 11 (phytanic acid type)","type":"related"},{"name":"HMSN 4","type":"exact"},{"name":"HMSN type IV","type":"exact"},{"name":"HSMN IV","type":"exact"},{"name":"RDPA","type":"related"},{"name":"Refsum Disease","type":"exact"},{"name":"Refsum disease","type":"exact"},{"name":"Refsum disease with increased pipecolic acidemia","type":"related"},{"name":"Refsum disease, adult, 1","type":"exact"},{"name":"Refsum disease, classic","type":"exact"},{"name":"Refsum's disease","type":"exact"},{"name":"adult Refsum disease","type":"exact"},{"name":"adult Refsum disease due to PHYH","type":"exact"},{"name":"classic Refsum disease","type":"exact"},{"name":"disorder of cornification 11 (phytanic acid type)","type":"related"},{"name":"hereditary motor and sensory neuropathy 4","type":"exact"},{"name":"hereditary motor and sensory neuropathy type 4","type":"exact"},{"name":"hereditary sensory and motor neuropathy type 4","type":"exact"},{"name":"heredopathia atactica polyneuritiformis","type":"exact"},{"name":"hypertrophic neuropathy of Refsum","type":"exact"},{"name":"phytanic acid oxidase deficiency","type":"exact"},{"name":"phytanic-CoA hydroxylase deficiency","type":"exact"}],"termid":"MONDO:0009958","terms_by_termid":{"MONDO:0009958":null},"xrefs":{"Monarch":{"xref_id":"0009958"}}}


