# terms

id: PBO:0045105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in malignant brain tumors 1 like 1 (pseudogene)","termid":"PBO:0045105"}


id: PBO:0039661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 2 subunit mu 1","termid":"PBO:0039661"}


id: PBO:0012223
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RAD3","termid":"PBO:0012223"}


id: PBO:0015215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocytosis protein Mso1 (predicted)","termid":"PBO:0015215"}


id: PBO:0068686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 67, pseudogene","termid":"PBO:0068686"}


id: PBO:0003213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase (NAD+) subunit 2","termid":"PBO:0003213"}


id: PBO:0047103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 153 member B","termid":"PBO:0047103"}


id: MONDO:1011100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephropathy characterized by renal tubular necrosis with extensive oxalate crystal deposition that occurs in dogs due to a mutation in the AGXT gene.","definition_xrefs":["PMID:22486513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"nephropathy, dog","termid":"MONDO:1012186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary hyperoxaluria, AGXT-related, dog","secondary_identifiers":["OMIA:001672-9615"],"synonyms":[{"name":"primary hyperoxaluria type I (Oxalosis I), dog","type":"related"}],"termid":"MONDO:1011100","xrefs":{"Monarch":{"xref_id":"1011100"}}}


id: GO:1990433
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A DNA-binding transcription factor complex consisting of CSL and mastermind proteins in complex with the cleaved, intracellular domain of Notch. It is required for both repression and activation of Notch target genes.","definition_xrefs":["GOC:bhm","GOC:dos","PMID:16530045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"CSL-Notch-Mastermind transcription factor complex","synonyms":[{"name":"CSL-NotchIC-MASTERMIND complex","type":"exact"}],"termid":"GO:1990433"}


id: MONDO:0010007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microbrachycephaly-ptosis-cleft lip syndrome is characterized by the association of intellectual deficit, microbrachycephaly, hypotelorism, palpebral ptosis, a thin/long face, cleft lip, and anomalies of the lumbar vertebra, sacrum and pelvis. It has been described in two Brazilian sisters. Transmission appears to be autosomal recessive.","definition_xrefs":["Orphanet:2511"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microbrachycephaly-ptosis-cleft lip syndrome","secondary_identifiers":["MEDGEN:162914","UMLS:C0796142","GARD:3596","OMIM:268850"],"synonyms":[{"name":"Richieri Costa-Guion Almeida-Ramos syndrome","type":"exact"},{"name":"Richieri-COSTA/Guion-Almeida syndrome","type":"related"},{"name":"microbrachycephaly ptosis cleft lip","type":"related"},{"name":"sao Paulo MCA/Mr syndrome","type":"related"},{"name":"short stature, intellectual disability, eye anomalies, and cleft Lip/palate","type":"related"},{"name":"short stature, mental retardation, eye anomalies, and cleft Lip/palate","type":"related"}],"termid":"MONDO:0010007","xrefs":{"Monarch":{"xref_id":"0010007"}}}


id: MONDO:0013967
data:
  {"annotated_genes":["SJAG_04146","SJAG_02788"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89055,89056],"is_not":false,"summary":null,"term":"MONDO:0013967"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX11B defect","termid":"MONDO:0100279"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02788":null,"SJAG_04146":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066","MONDO:0005244","MONDO:0019053","MONDO:0006025"],"is_obsolete":false,"name":"peroxisome biogenesis disorder 14B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15881","UMLS:C3554055","OMIM:614920","MEDGEN:766969","DOID:0081274"],"synonyms":[{"name":"PEX11B peroxisome biogenesis disorder","type":"exact"},{"name":"PEX14B","type":"related"},{"name":"peroxisome biogenesis disorder 14B","type":"exact"},{"name":"peroxisome biogenesis disorder type 14B","type":"exact"}],"termid":"MONDO:0013967","terms_by_termid":{"MONDO:0013967":null},"xrefs":{"Monarch":{"xref_id":"0013967"}}}


id: GO:1903404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of renal phosphate excretion.","definition_xrefs":["PMID:8700837","GO_REF:0000058","GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of renal phosphate excretion","termid":"GO:1903402"},{"relation_name":"positively_regulates","term_name":"renal phosphate excretion","termid":"GO:0044722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of renal phosphate excretion","synonyms":[{"name":"activation of renal phosphate excretion","type":"narrow"},{"name":"activation of renal phosphate ion excretion","type":"narrow"},{"name":"positive regulation of renal phosphate ion excretion","type":"exact"},{"name":"up regulation of renal phosphate excretion","type":"exact"},{"name":"up regulation of renal phosphate ion excretion","type":"exact"},{"name":"up-regulation of renal phosphate excretion","type":"exact"},{"name":"up-regulation of renal phosphate ion excretion","type":"exact"},{"name":"upregulation of renal phosphate excretion","type":"exact"},{"name":"upregulation of renal phosphate ion excretion","type":"exact"}],"termid":"GO:1903404"}


id: PBO:0039541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 37","termid":"PBO:0039541"}


id: PBO:0045047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide S-acetyltransferase","termid":"PBO:0045047"}


id: MONDO:0030870
data:
  {"annotated_genes":["SJAG_02339"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87532],"is_not":false,"summary":null,"term":"MONDO:0030870"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 17","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1748767","UMLS:C5436889","OMIM:619146","DOID:0080874"],"synonyms":[{"name":"POF17","type":"exact"},{"name":"premature ovarian failure 17","type":"exact"}],"termid":"MONDO:0030870","terms_by_termid":{"MONDO:0030870":null},"xrefs":{"Monarch":{"xref_id":"0030870"}}}


id: PBO:0071107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 109","termid":"PBO:0071107"}


id: GO:0070990
data:
  {"annotated_genes":["SJAG_04914","SJAG_02279","SJAG_02558","SJAG_03291"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72221,89283],"is_not":false,"summary":null,"term":"GO:0070990"},{"annotations":[72015,115852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990446"},{"annotations":[115853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990447"}]},"cv_name":"molecular_function","definition":"Binding to a small nuclear ribonucleoprotein particle.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex binding","termid":"GO:0043021"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02279":null,"SJAG_02558":null,"SJAG_03291":null,"SJAG_04914":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"snRNP binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070990","terms_by_termid":{"GO:0070990":null,"GO:1990446":null,"GO:1990447":null}}


id: GO:0033513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including acetyl-CoA, via the intermediate 5-aminopentanamide.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine catabolic process to acetyl-CoA","termid":"GO:0019474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0055086","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"L-lysine catabolic process to acetyl-CoA via 5-aminopentanamide","synonyms":[{"name":"L-lysine breakdown to acetyl-CoA via 5-aminopentanamide","type":"exact"},{"name":"L-lysine degradation to acetyl-CoA via 5-aminopentanamide","type":"exact"}],"termid":"GO:0033513"}


id: PBO:0001960
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates cfh4","termid":"PBO:0001960"}


id: GO:0098029
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A short structure attached to an icosahedral virion capsid, and used for attachment to the host cell.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"icosahedral viral capsid, spike","termid":"GO:0098029"}


id: PBO:0073821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 1","termid":"PBO:0073821"}


id: GO:0044428
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear part (obsolete GO:0044428)","synonyms":[{"name":"nuclear subcomponent","type":"exact"},{"name":"nucleus component","type":"exact"}],"termid":"GO:0044428"}


id: PBO:0091350
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human CLNS1A","termid":"PBO:0091350"}


id: PBO:0065901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB43, member RAS oncogene family","termid":"PBO:0065901"}


id: GO:0022628
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The large subunit of a ribosome contained within a chloroplast.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid large ribosomal subunit","termid":"GO:0000311"},{"relation_name":"part_of","term_name":"chloroplast ribosome","termid":"GO:0043253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast large ribosomal subunit","synonyms":[{"name":"chloroplast ribosomal LSU complex","type":"exact"},{"name":"chloroplast ribosomal large subunit complex","type":"exact"}],"termid":"GO:0022628"}


id: PBO:0110471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COA1 pseudogene 1","termid":"PBO:0110471"}


id: GO:1905773
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 8-hydroxy-2'-deoxyguanosine an oxidized purine residue found in damaged DNA.","definition_xrefs":["GOC:BHF","GOC:nc","GOC:TermGenie","PMID:19734539","GOC:BHF_telomere","GO_REF:0000067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized purine DNA binding","termid":"GO:0032357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"8-hydroxy-2'-deoxyguanosine DNA binding","termid":"GO:1905773"}


id: GO:0099138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a chimeric sorocarp in which cells of all genotypes have an equal chance of becoming a spore cell.","definition_xrefs":["PMID:18272966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chimeric sorocarp development","termid":"GO:0099134"},{"relation_name":"is_a","term_name":"altruistic, chimeric, non-reproductive fruiting body development","termid":"GO:0099137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"altruistic, chimeric sorocarp development","synonyms":[{"name":"fully co-operative, chimeric sorocarp development","type":"exact"}],"termid":"GO:0099138"}


id: PBO:0030177
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_3'-5'-exoribonuclease_activity","termid":"PBO:0030177"}


id: MONDO:0016415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immunodeficiency-centromeric instability-facial anomalies syndrome (obsolete MONDO:0016415)","termid":"MONDO:0016415","xrefs":{"Monarch":{"xref_id":"0016415"}}}


id: GO:0021972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a pyramidal cell that is part of the corticospinal tract is directed after decussation through the spinal cord in response to a combination of attractive and repulsive cues.","definition_xrefs":["PMID:9878731","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"corticospinal neuron axon guidance","termid":"GO:0021966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticospinal neuron axon guidance through spinal cord","synonyms":[{"name":"corticospinal neuron axon pathfinding through spinal cord","type":"exact"}],"termid":"GO:0021972"}


id: PR:O74758
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17D11.03c gene.","definition_xrefs":["UniProtKB:O74758","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17D11.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.03c","synonyms":[{"name":"Spom972h-SPBC17D11.03c","type":"exact"}],"termid":"PR:O74758"}


id: PBO:0085561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein containing GATA family zinc finger motifs; similar to Gln3p and Dal80p; expression repressed by leucine","termid":"PBO:0085561"}


id: GO:0005046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a KDEL sequence, the C terminus tetrapeptide sequence Lys-Asp-Glu-Leu found in proteins that are to be retained in the endoplasmic reticulum.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER retention sequence binding","termid":"GO:0046923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005048","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"KDEL sequence binding","synonyms":[{"name":"KDEL receptor activity","type":"narrow"}],"termid":"GO:0005046"}


id: GO:0048818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hair follicle maturation.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hair follicle maturation","termid":"GO:0048819"},{"relation_name":"is_a","term_name":"positive regulation of hair follicle development","termid":"GO:0051798"},{"relation_name":"positively_regulates","term_name":"hair follicle maturation","termid":"GO:0048820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hair follicle maturation","synonyms":[{"name":"activation of hair follicle maturation","type":"narrow"},{"name":"stimulation of hair follicle maturation","type":"narrow"},{"name":"up regulation of hair follicle maturation","type":"exact"},{"name":"up-regulation of hair follicle maturation","type":"exact"},{"name":"upregulation of hair follicle maturation","type":"exact"}],"termid":"GO:0048818"}


id: GO:0035213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the clypeo-labral disc over time, from its formation to the metamorphosis to form adult structures. The clypeo-labral disc develops into the labrum, anterior cibarial plate, fish trap bristles, epistomal sclerite.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clypeo-labral disc development","synonyms":[{"name":"development of structures derived from the clypeo-labral disc","type":"exact"}],"termid":"GO:0035213"}


id: PBO:0083032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta-1-pyrroline-5-carboxylate dehydrogenase; nuclear-encoded mitochondrial protein involved in utilization of proline as sole nitrogen source; deficiency of human homolog ALDH4A1 causes type II hyperprolinemia (HPII), an autosomal recessive inborn error of metabolism; human homolog ALDH4A1 can complement yeast null mutant","termid":"PBO:0083032"}


id: GO:0099543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse mediated by a soluble gas ligand crossing the synaptic cleft.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling by soluble gas","termid":"GO:0099543"}


id: PBO:0045848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 38","termid":"PBO:0045848"}


id: PBO:0043133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 1","termid":"PBO:0043133"}


id: GO:0008141
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A glue which attaches the pupae to the substrate during metamorphosis, as in, but not restricted to, the true flies (Diptera, ncbi_taxonomy_id:7147).","definition_xrefs":["PMID:825230"],"gene_count":0,"genotype_count":0,"name":"obsolete puparial glue (sensu Diptera) (obsolete GO:0008141)","synonyms":[{"name":"puparial glue (sensu Diptera)","type":"exact"}],"termid":"GO:0008141"}


id: GO:1904755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gut granule assembly.","definition_xrefs":["GOC:TermGenie","PMID:17535251","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"gut granule assembly","termid":"GO:1902900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of gut granule assembly","synonyms":[{"name":"regulation of gut granule biogenesis","type":"exact"},{"name":"regulation of gut granule formation","type":"exact"}],"termid":"GO:1904755"}


id: PBO:0080119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UXT antisense RNA 1","termid":"PBO:0080119"}


id: GO:0044160
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pigmented membrane of any host thylakoid.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"part_of","term_name":"host thylakoid","termid":"GO:0044159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host thylakoid membrane","termid":"GO:0044160"}


id: GO:0035299
data:
  {"annotated_genes":["SJAG_01148"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76547],"is_not":false,"summary":null,"term":"GO:0035299"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + ATP = 1D-myo-inositol hexakisphosphate + ADP + H+.","definition_xrefs":["RHEA:20313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol pentakisphosphate kinase activity","termid":"GO:0120517"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01148":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"inositol-1,3,4,5,6-pentakisphosphate 2-kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:2.7.1.158","Reactome:R-HSA-1855176","Reactome:R-HSA-1855179","MetaCyc:RXN-7163","KEGG_REACTION:R05202"],"synonyms":[{"name":"IP5 2-kinase activity","type":"related"},{"name":"Ins(1,3,4,5,6)P5 2-kinase activity","type":"related"},{"name":"inositol hexakisphosphate synthase","type":"related"},{"name":"inositol pentakisphosphate 2-kinase activity","type":"exact"},{"name":"inositol polyphosphate kinase activity","type":"related"},{"name":"inositol-pentakisphosphate 2-kinase activity","type":"related"}],"termid":"GO:0035299","terms_by_termid":{"GO:0035299":null}}


id: PBO:0030564
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_tyrosine_level","termid":"PBO:0030564"}


id: PBO:0090670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial CH-OH group oxidoreductase, human RTN4IP1 ortholog, implicated in mitochondrial organization or tethering","termid":"PBO:0090670"}


id: PBO:0029487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_phosphatidylethanolamine_level","termid":"PBO:0029487"}


id: GO:0010857
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Calcium-dependent catalysis of the reaction: a protein + ATP = a phosphoprotein + ADP.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium-dependent protein kinase activity (obsolete GO:0010857)","termid":"GO:0010857"}


id: GO:0052624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: demethylphylloquinol + S-adenosyl-L-methionine = H+ + phylloquinol + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:40551","PMID:14617060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-methyltransferase activity","termid":"GO:0008169"},{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"2-phytyl-1,4-naphthoquinone methyltransferase activity","secondary_identifiers":["EC:2.1.1.329","MetaCyc:RXN-7569","KEGG_REACTION:R06859"],"synonyms":[{"name":"S-adenosyl-L-methionine:2-phytyl-1,4-naphthoquinone methyltransferase activity","type":"exact"},{"name":"S-adenosyl-L-methionine:demethylphylloquinone methyltransferase activity","type":"exact"},{"name":"S-adenosyl-L-methionine:salicylate carboxyl methyltransferase activity","type":"exact"},{"name":"SA methyltransferase activity","type":"broad"},{"name":"demethylphylloquinone methyltransferase activity","type":"exact"},{"name":"salicylate methyltransferase activity","type":"broad"},{"name":"salicylic acid methyltransferase activity","type":"broad"}],"termid":"GO:0052624"}


id: PBO:0074927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 95","termid":"PBO:0074927"}


id: MOD:00184
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to L-3'-bromophenylalanine.","definition_xrefs":["RESID:AA0175","PubMed:2076468","PubMed:9033387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monobrominated L-phenylalanine","termid":"MOD:00972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3'-bromophenylalanine","synonyms":[{"name":"(S)-2-amino-3-(3-bromophenyl)propanoic acid","type":"exact"},{"name":"3'BrPhe","type":"exact"},{"name":"Bromo","type":"related"},{"name":"L-3'-bromophenylalanine","type":"exact"},{"name":"bromination","type":"related"},{"name":"m-bromophenylalanine","type":"exact"},{"name":"meta-bromophenylalanine","type":"exact"}],"termid":"MOD:00184"}


id: PBO:0030666
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_25S_rRNA_level","termid":"PBO:0030666"}


id: PBO:0088853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane TRP-like calcium ion channel Trp1322","termid":"PBO:0088853"}


id: GO:0050402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-xylono-1,4-lactone + H2O = D-xylonate.","definition_xrefs":["EC:3.1.1.68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"xylono-1,4-lactonase activity","secondary_identifiers":["MetaCyc:RXN-19753","RHEA:18341"],"synonyms":[{"name":"D-xylono-1,4-lactone lactonohydrolase activity","type":"related"},{"name":"xylono-g-lactonase activity","type":"related"},{"name":"xylonolactonase activity","type":"related"}],"termid":"GO:0050402"}


id: PBO:0058322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4695","termid":"PBO:0058322"}


id: GO:0043711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a pilus, a short filamentous structure on a bacterial cell, flagella-like in structure and generally present in many copies.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection organization","termid":"GO:0030030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pilus organization","synonyms":[{"name":"pilus organisation","type":"exact"},{"name":"pilus organization and biogenesis","type":"related"}],"termid":"GO:0043711"}


id: PBO:0080734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WWOX antisense RNA 1","termid":"PBO:0080734"}


id: GO:0016052
data:
  {"annotated_genes":["SJAG_00667","SJAG_04320","SJAG_00096","SJAG_02945","SJAG_02009","SJAG_02010","SJAG_04301","SJAG_04859","SJAG_02435","SJAG_06622","SJAG_04048","SJAG_01561","SJAG_04238","SJAG_00461","SJAG_05314","SJAG_02478","SJAG_02649","SJAG_01888","SJAG_01783","SJAG_04660","SJAG_05006","SJAG_03851","SJAG_02107","SJAG_00237","SJAG_04276","SJAG_04789","SJAG_00115","SJAG_04192","SJAG_04327","SJAG_02076","SJAG_00685","SJAG_06309","SJAG_02954","SJAG_01029","SJAG_03295","SJAG_00485","SJAG_03828","SJAG_01171","SJAG_02131","SJAG_03824","SJAG_01310","SJAG_02949","SJAG_02785","SJAG_02369","SJAG_01017","SJAG_00620","SJAG_05272","SJAG_03373","SJAG_03903","SJAG_00839","SJAG_05001","SJAG_06621","SJAG_03958","SJAG_00027","SJAG_04334","SJAG_03174","SJAG_04850","SJAG_02796","SJAG_00310","SJAG_00605","SJAG_03818","SJAG_02135","SJAG_04963","SJAG_03646","SJAG_04851","SJAG_03660","SJAG_03444","SJAG_02951","SJAG_02950","SJAG_04495"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57548,57934,58165,59966,60606,64061,64832,68874,97120,105933],"is_not":false,"summary":null,"term":"GO:0016052"},{"annotations":[90468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[97652,103109,96918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019568"},{"annotations":[105315,111369,96420,111370,107405,107404,107403,111367,107775,74194,111368,111371,79617,118354,105573,107774,99907,100178,111365,111366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[121343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030995"},{"annotations":[95904,102072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044347"},{"annotations":[58918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019303"},{"annotations":[103110,97653,96920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042843"},{"annotations":[115714,115708,115715,115726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033499"},{"annotations":[78835,72243,75025,72346,76867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009251"},{"annotations":[73790,80424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019563"},{"annotations":[105237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005980"},{"annotations":[90469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[73582,73844,75157,81649,74865,80634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"},{"annotations":[103530,103529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000025"},{"annotations":[69614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005995"},{"annotations":[74846,77912],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[117630,98013,110361,59017,68441,98014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000272"},{"annotations":[98488],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2001172"},{"annotations":[91563],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905857"},{"annotations":[71770],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[77911],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043456"},{"annotations":[74379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"},{"annotations":[78580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005987"},{"annotations":[73237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005993"},{"annotations":[121057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005998"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"catabolic 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catabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:24699070":null},"secondary_identifiers":["GO:0006095","GO:0044724","GO:0044276"],"synonyms":[{"name":"carbohydrate breakdown","type":"exact"},{"name":"carbohydrate catabolism","type":"exact"},{"name":"carbohydrate degradation","type":"exact"},{"name":"catabolic carbohydrate metabolic process","type":"exact"},{"name":"catabolic carbohydrate metabolism","type":"exact"},{"name":"multicellular organismal carbohydrate catabolic process","type":"narrow"},{"name":"single-organism carbohydrate catabolic 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id: GO:1902406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular process in which the mitotic contractile ring cytokinetic ring attains its fully functional state.","definition_xrefs":["PMID:25451933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin contractile ring maturation","termid":"GO:0031566"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic cytokinesis","termid":"GO:0000281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0000281","GO:0008150","GO:0007049","GO:0007010"],"is_obsolete":false,"name":"mitotic actomyosin contractile ring maturation","synonyms":[{"name":"mitotic cytokinesis contractile ring maintenance","type":"related"}],"termid":"GO:1902406"}


id: GO:0006672
data:
  {"annotated_genes":["SJAG_01057","SJAG_01219","SJAG_02842","SJAG_04178","SJAG_02085","SJAG_04550","SJAG_02305"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74856],"is_not":false,"summary":null,"term":"GO:0006672"},{"annotations":[110791,75922,78628,79881,80864,80700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046513"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving ceramides, any N-acylated sphingoid.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01057":null,"SJAG_01219":null,"SJAG_02085":null,"SJAG_02305":null,"SJAG_02842":null,"SJAG_04178":null,"SJAG_04550":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ceramide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ceramide metabolism","type":"exact"}],"termid":"GO:0006672","terms_by_termid":{"GO:0006672":null,"GO:0046513":null}}


id: PR:Q9UTN2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ath2 gene.","definition_xrefs":["UniProtKB:Q9UTN2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C139.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC139.01c","synonyms":[{"name":"Spom972h-ath2","type":"exact"}],"termid":"PR:Q9UTN2"}


id: GO:0034824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: citronellyl-CoA + NAD+ = cis-geranyl-CoA + NADH + H+.","definition_xrefs":["PMID:31964529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"citronellyl-CoA dehydrogenase activity","termid":"GO:0034824"}


id: PBO:0043480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNPY2 antisense RNA 1","termid":"PBO:0043480"}


id: PR:P0CT39
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-6 gene.","definition_xrefs":["UniProtKB:P0CT39","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-6 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.08","synonyms":[{"name":"Spom972h-Tf2-6","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT39"}


id: PBO:0058472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5580","termid":"PBO:0058472"}


id: PBO:0068923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 166, pseudogene","termid":"PBO:0068923"}


id: PATO:0001365
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's having spines, thorns or similar thin projections on its surface.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"surface feature shape","termid":"PATO:0001925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spiny","termid":"PATO:0001365"}


id: PBO:0065340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prune homolog 2 with BCH domain","termid":"PBO:0065340"}


id: PBO:0081301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 83","termid":"PBO:0081301"}


id: PBO:0082176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor (ARF) GTPase activating protein (GAP) effector; involved in the secretory and endocytic pathways; contains C2C2H2 cysteine/histidine motif","termid":"PBO:0082176"}


id: PBO:0028944
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glutathione_synthase_activity","termid":"PBO:0028944"}


id: MONDO:0030936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, progressive myoclonic, 12","secondary_identifiers":["OMIM:619191","MEDGEN:1778162","UMLS:C5543069"],"synonyms":[{"name":"EPM12","type":"exact"},{"name":"epilepsy, progressive myoclonic, 12","type":"exact"}],"termid":"MONDO:0030936","xrefs":{"Monarch":{"xref_id":"0030936"}}}


id: GO:0005966
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An enzyme complex that catalyzes the hydrolysis of bonds in a cyclic nucleotide.","definition_xrefs":["EC:3.1.4.-"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclic-nucleotide phosphodiesterase complex (obsolete GO:0005966)","synonyms":[{"name":"photoreceptor cyclic-nucleotide phosphodiesterase complex","type":"narrow"}],"termid":"GO:0005966"}


id: MONDO:0800152
data:
  {"annotated_genes":["SJAG_02954"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009258"}]},"cv_name":"mondo","definition":"An inherited disorder of carbohydrate metabolism that is has its basis in the disruption of galactose and/or fructose metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn carbohydrate metabolic disorder","termid":"MONDO:0019214"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"disorder of galactose and fructose metabolism","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0800152","terms_by_termid":{"MONDO:0009258":null},"xrefs":{"Monarch":{"xref_id":"0800152"}}}


id: PBO:0000736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin family","termid":"PBO:0000736"}


id: SO:1000143
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"LS is an autosynaptic chromosome carrying the two left (L = levo) telomeres.","definition_xrefs":["FB:manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosynaptic_chromosome","termid":"SO:1000136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laevosynaptic_chromosome","synonyms":[{"name":"laevosynaptic chromosome","type":"exact"}],"termid":"SO:1000143"}


id: GO:2001252
data:
  {"annotated_genes":["SJAG_02169","SJAG_02990","SJAG_03624","SJAG_02342","SJAG_03353","SJAG_02336","SJAG_04259","SJAG_03126","SJAG_03048","SJAG_00082","SJAG_00823","SJAG_03681","SJAG_01679","SJAG_01297","SJAG_04597","SJAG_02592","SJAG_00883","SJAG_02451","SJAG_01837","SJAG_00142","SJAG_00718"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113946,109188,105826,92595,110218,117903,115777,116269,101506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[96084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[100879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031453"},{"annotations":[91521,104309,118681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"},{"annotations":[104313,118683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903380"},{"annotations":[91872,96300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902846"},{"annotations":[93062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090053"},{"annotations":[93063,96260,112321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090055"},{"annotations":[109367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045876"},{"annotations":[99096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032215"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chromosome organization.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"positively_regulates","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00142":null,"SJAG_00718":null,"SJAG_00823":null,"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02342":null,"SJAG_02451":null,"SJAG_02592":null,"SJAG_02990":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03624":null,"SJAG_03681":null,"SJAG_04259":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chromosome organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of chromosome organisation","type":"exact"},{"name":"positive regulation of chromosome organization and biogenesis","type":"related"},{"name":"positive regulation of maintenance of genome integrity","type":"related"},{"name":"positive regulation of nuclear genome maintenance","type":"related"}],"termid":"GO:2001252","terms_by_termid":{"GO:0031453":null,"GO:0032215":null,"GO:0045876":null,"GO:0090053":null,"GO:0090055":null,"GO:0140499":null,"GO:1902426":null,"GO:1902846":null,"GO:1903380":null,"GO:1905561":null}}


id: PBO:0045024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disrupted in renal carcinoma 1","termid":"PBO:0045024"}


id: GO:0021555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the midbrain-hindbrain boundary is generated and organized. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate.","definition_xrefs":["GOC:jid","PMID:15541513","GO_REF:0000021","GOC:dph","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"midbrain-hindbrain boundary development","termid":"GO:0030917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"midbrain-hindbrain boundary morphogenesis","synonyms":[{"name":"MHB morphogenesis","type":"exact"},{"name":"isthmus morphogenesis","type":"exact"}],"termid":"GO:0021555"}


id: GO:0048162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage in oogenesis when many layers of follicle cells surround the oocyte. There is a yolk nucleus (Balbiani's Body) near the germinal vesicle.","definition_xrefs":["GOC:jid","GOC:mtg_sensu","ISBN:0198542771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammalian oogenesis stage","termid":"GO:0022605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multi-layer follicle stage","synonyms":[{"name":"mammalian oogenesis stage 5","type":"exact"}],"termid":"GO:0048162"}


id: PBO:0085059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential small GTPase; member of the Rho/Rac subfamily of Ras-like proteins; likely to be involved in the establishment of cell polarity; has long N-terminal extension that plays an important role in Rho4p function and is shared with Rho4 homologs in other yeasts and filamentous fungi","termid":"PBO:0085059"}


id: GO:0017002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with activin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. Activin is one of two gonadal glycoproteins related to transforming growth factor beta.","definition_xrefs":["GOC:signaling","ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein serine/threonine kinase activity","termid":"GO:0004675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0004672","GO:0038023","GO:0140096","GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"activin receptor activity","synonyms":[{"name":"activin-activated receptor activity","type":"exact"}],"termid":"GO:0017002"}


id: MONDO:0018032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete constitutional neutropenia with extra-hematopoietic manifestations (obsolete MONDO:0018032)","secondary_identifiers":["Orphanet:331184"],"termid":"MONDO:0018032","xrefs":{"Monarch":{"xref_id":"0018032"}}}


id: MONDO:0012253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple epiphyseal dysplasia, with severe proximal femoral dysplasia is a rare primary bone dysplasia characterized by severe, early-onset dysplasia of the proximal femurs, with almost complete absence of the secondary ossification centers and abnormal development of the femoral necks (short and broad with irregular metaphyses). It is associated with gait abnormality, mild short stature, arthralgia, joint stiffness with limited mobility of the hips and irregular acetabula, and hip and knee pain. Coxa vara and mild spinal changes are also associated.","definition_xrefs":["Orphanet:166029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple epiphyseal dysplasia","termid":"MONDO:0016648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"multiple epiphyseal dysplasia, with severe proximal femoral dysplasia","secondary_identifiers":["GARD:17015","ICD10CM:Q77.3","MEDGEN:324484","MESH:C563736","OMIM:609324","UMLS:C1836315"],"synonyms":[{"name":"epiphyseal dysplasia, multiple, with severe proximal femoral dysplasia","type":"related"}],"termid":"MONDO:0012253","xrefs":{"Monarch":{"xref_id":"0012253"}}}


id: MONDO:0025713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary angioedema","termid":"MONDO:0019623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"angioedema, hereditary, 7","secondary_identifiers":["OMIM:619366","UMLS:C5543526","MEDGEN:1784046"],"synonyms":[{"name":"HAE7","type":"exact"}],"termid":"MONDO:0025713","xrefs":{"Monarch":{"xref_id":"0025713"}}}


id: PBO:0045357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidase 1","termid":"PBO:0045357"}


id: MONDO:0021474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the ear.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ benign neoplasm","termid":"MONDO:0000633"},{"relation_name":"is_a","term_name":"ear neoplasm","termid":"MONDO:0021233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of ear","secondary_identifiers":["NCIT:C8417","UMLS:C0347354","MEDGEN:138081","SCTID:255181009"],"synonyms":[{"name":"aural neoplasms, benign","type":"exact"},{"name":"benign Ear neoplasm","type":"exact"},{"name":"benign Ear tumor","type":"exact"},{"name":"benign Ear tumour","type":"exact"},{"name":"benign neoplasm of the Ear","type":"exact"},{"name":"benign tumor of Ear","type":"exact"},{"name":"benign tumor of the Ear","type":"exact"},{"name":"benign tumour of Ear","type":"exact"},{"name":"benign tumour of the Ear","type":"exact"},{"name":"ear benign neoplasm","type":"exact"}],"termid":"MONDO:0021474","xrefs":{"Monarch":{"xref_id":"0021474"}}}


id: PBO:0048436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group)","termid":"PBO:0048436"}


id: PBO:0062036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 5","termid":"PBO:0062036"}


id: PBO:0027009
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomere_tethering_at_nuclear_periphery","termid":"PBO:0027009"}


id: GO:1990851
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing a secreted Wnt protein associated with its receptor, Frizzled (Fz), and co-receptor low density lipoprotein receptor-related protein 5 (LRP5) or LRP6.","definition_xrefs":["PMID:11448771","GOC:PARL","GOC:bf","PMID:20093360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Wnt-Frizzled-LRP5/6 complex","synonyms":[{"name":"Frizzled-LRP5/6 complex","type":"related"},{"name":"Fz/Wnt/LRP6 complex","type":"narrow"},{"name":"WNT-FZD-LRP5 complex","type":"narrow"},{"name":"WNT-FZD-LRP6 complex","type":"narrow"},{"name":"Wnt receptor complex","type":"broad"},{"name":"Wnt-FZD-LRP5/6 trimeric complex","type":"exact"},{"name":"Wnt-induced Frizzled-LRP5/6 complex","type":"related"},{"name":"Wnt.Fz.LRP ternary complex","type":"exact"}],"termid":"GO:1990851"}


id: GO:0038025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the secreted glycoprotein reelin, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["PMID:12827279","PMID:20223215","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"reelin receptor activity","synonyms":[{"name":"reeler receptor activity","type":"exact"}],"termid":"GO:0038025"}


id: PATO:0001338
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in a population of multiple sexes.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"population quality","termid":"PATO:0002003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed sex","termid":"PATO:0001338"}


id: PBO:0067214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 280, pseudogene","termid":"PBO:0067214"}


id: PR:P87015
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC186.03 gene.","definition_xrefs":["UniProtKB:P87015","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparaginase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC186.03","synonyms":[{"name":"L-asparagine amidohydrolase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC186.03","type":"exact"}],"termid":"PR:P87015"}


id: GO:0052401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of the production of reactive oxygen species as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of defense-related symbiont reactive oxygen species production (obsolete GO:0052401)","synonyms":[{"name":"activation by organism of defense-related symbiont AOS production","type":"exact"},{"name":"activation by organism of defense-related symbiont ROI production","type":"exact"},{"name":"activation by organism of defense-related symbiont ROS production","type":"exact"},{"name":"activation by organism of defense-related symbiont active oxygen species production","type":"exact"},{"name":"activation by organism of defense-related symbiont metabolic burst","type":"exact"},{"name":"activation by organism of defense-related symbiont oxidative burst","type":"exact"},{"name":"activation by organism of defense-related symbiont reactive oxidative species production","type":"exact"},{"name":"activation by organism of defense-related symbiont reactive oxygen intermediate production","type":"exact"},{"name":"activation by organism of defense-related symbiont reactive oxygen species production","type":"exact"},{"name":"activation by organism of defense-related symbiont respiratory burst","type":"exact"},{"name":"induction by organism of defense-related symbiont AOS production","type":"exact"},{"name":"induction by organism of defense-related symbiont ROI production","type":"exact"},{"name":"induction by organism of defense-related symbiont ROS production","type":"exact"},{"name":"induction by organism of defense-related symbiont active oxygen species production","type":"exact"},{"name":"induction by organism of defense-related symbiont metabolic burst","type":"exact"},{"name":"induction by organism of defense-related symbiont oxidative burst","type":"exact"},{"name":"induction by organism of defense-related symbiont reactive oxygen intermediate production","type":"exact"},{"name":"induction by organism of defense-related symbiont reactive oxygen species production","type":"exact"},{"name":"induction by organism of defense-related symbiont respiratory burst","type":"exact"}],"termid":"GO:0052401"}


id: PBO:0067668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 847, pseudogene","termid":"PBO:0067668"}


id: PBO:0076142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUCLG2 pseudogene 1","termid":"PBO:0076142"}


id: PBO:0072067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S11 pseudogene 5","termid":"PBO:0072067"}


id: GO:0052616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + NADPH + ent-kaur-16-en-19-ol + oxygen = 2 H2O + NADP+ + ent-kaur-16-en-19-al.","definition_xrefs":["MetaCyc:RXN-5242"],"gene_count":0,"genotype_count":0,"name":"obsolete ent-kaur-16-en-19-ol oxidase activity (obsolete GO:0052616)","termid":"GO:0052616"}


id: GO:0140053
data:
  {"annotated_genes":["SJAG_00086","SJAG_04885","SJAG_02071","SJAG_01468","SJAG_01352","SJAG_03176","SJAG_02067","SJAG_04635","SJAG_01630","SJAG_05221","SJAG_04700","SJAG_00944","SJAG_03550","SJAG_01520","SJAG_00513","SJAG_03071","SJAG_02236","SJAG_03402","SJAG_16456","SJAG_01591","SJAG_07009","SJAG_05573","SJAG_04753","SJAG_02217","SJAG_02762","SJAG_05693","SJAG_04788","SJAG_04856","SJAG_03636","SJAG_00497","SJAG_03332","SJAG_01045","SJAG_04409","SJAG_05008","SJAG_02615","SJAG_02452","SJAG_00865","SJAG_00799","SJAG_01518","SJAG_04378","SJAG_02836","SJAG_01806","SJAG_04889","SJAG_00358","SJAG_04351","SJAG_02548","SJAG_04862","SJAG_00308","SJAG_00887","SJAG_03014","SJAG_02353","SJAG_03053","SJAG_02777","SJAG_04490","SJAG_04207","SJAG_00997","SJAG_01704","SJAG_00833","SJAG_01829","SJAG_03674","SJAG_00889","SJAG_01446","SJAG_01797","SJAG_00860","SJAG_04285","SJAG_02288","SJAG_03322","SJAG_04367","SJAG_01368","SJAG_04893","SJAG_05218","SJAG_02991","SJAG_06586","SJAG_01463","SJAG_00060","SJAG_03584","SJAG_03192","SJAG_03461","SJAG_02721","SJAG_03104","SJAG_03649","SJAG_04494","SJAG_00462","SJAG_05271","SJAG_00782","SJAG_00653","SJAG_00103","SJAG_01734","SJAG_00797","SJAG_01303","SJAG_01478","SJAG_01882","SJAG_00847","SJAG_02359","SJAG_04959","SJAG_01517","SJAG_04689","SJAG_04929","SJAG_00077","SJAG_03040","SJAG_01727","SJAG_02302","SJAG_01174","SJAG_06253","SJAG_00936","SJAG_04918","SJAG_03585","SJAG_01473","SJAG_02643","SJAG_03426","SJAG_04738","SJAG_02201","SJAG_03459","SJAG_00286","SJAG_00148","SJAG_00844","SJAG_03289","SJAG_04240","SJAG_02977","SJAG_01767","SJAG_04473","SJAG_04377","SJAG_04281","SJAG_02856","SJAG_00105","SJAG_00255","SJAG_01249","SJAG_01413","SJAG_04493","SJAG_03065","SJAG_01719","SJAG_02428","SJAG_04244","SJAG_04173","SJAG_00634","SJAG_04164","SJAG_00628","SJAG_04019","SJAG_03297","SJAG_05270","SJAG_00315","SJAG_01577","SJAG_00186","SJAG_06110","SJAG_04216","SJAG_03284","SJAG_05560","SJAG_06038","SJAG_05320","SJAG_05244","SJAG_02324"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74394,89579,90253,101988,104609,105565,107393,107595,108073,111736,115949,117290,118516],"is_not":false,"summary":null,"term":"GO:0140053"},{"annotations":[116430,100870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090616"},{"annotations":[91828,98157,105866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090615"},{"annotations":[111871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140040"},{"annotations":[105541,103283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000963"},{"annotations":[99901,104199,105869,118158,77498,107989,109073,79070,110048,111817,80411,108355,110044,90891,70843,95604,95700,98542,58266,99583,110554,105265,113087,105617,91802,114715,114885,97147,110439,115445,93345,99875,116711,117596,117681,110143,77080,93454,96373,116313,67714,96077,99902,71380,101011,119406,91750,72562,114351,114452,98918,107657,98807,103022,120062,103391,81192,60936,93539,91829,119933,98131,120429,78143,104245,96368,91349,90212,116594,114213,112110,108714,73555,118017,106302,77157,120101,111334,93962,100132,110105,112362,119011,105016,104551,105937,110193,117418,118267,109905,79902,71506,97250,63196,98510,76908,112644,112756,79847],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032543"},{"annotations":[93870,81901,75407,81752],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070125"},{"annotations":[80295,107536,92871,75878,110308,103229,103843,100618,109235],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070124"},{"annotations":[97402,104001,97839,100563],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070126"},{"annotations":[82187,89593,119937,71823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990180"},{"annotations":[79876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[77245,120649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072670"},{"annotations":[96150,108838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"},{"annotations":[94678,77994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070899"},{"annotations":[100619,114665],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070131"},{"annotations":[102384],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070134"},{"annotations":[89268,100090,97040],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006391"},{"annotations":[96561],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070127"}]},"cv_name":"biological_process","definition":"The process in which a mitochondrial gene's sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. 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id: PBO:0054131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1497","termid":"PBO:0054131"}


id: MONDO:0010741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any tooth agenesis in which the cause of the disease is a mutation in the EDA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth agenesis","termid":"MONDO:0005486"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tooth agenesis, selective, X-linked, 1","secondary_identifiers":["MEDGEN:410143","GARD:18246","OMIM:313500","MESH:C567060","UMLS:C1970757"],"synonyms":[{"name":"EDA tooth agenesis","type":"exact"},{"name":"STHAGX1","type":"related"},{"name":"hypodontia/oligodontia, X-linked, 1","type":"related"},{"name":"tooth agenesis caused by mutation in EDA","type":"exact"},{"name":"tooth agenesis, selective, X-linked 1, X-linked dominant","type":"exact"},{"name":"tooth agenesis, selective, X-linked, 1","type":"exact"},{"name":"tooth agenesis, selective, X-linked, type 1","type":"exact"}],"termid":"MONDO:0010741","xrefs":{"Monarch":{"xref_id":"0010741"}}}


id: PATO:0002033
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A reflective quality that is the light scattering occurring at wide angle (around 90 degrees) to the incident beam.","definition_xrefs":["PATOC:mc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation reflective quality","termid":"PATO:0001294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"side scatter","termid":"PATO:0002033"}


id: MONDO:0019012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare autosomal recessive syndrome characterized by premature closure of cranial sutures leading to cone-shaped head, fusion of the digits, and the presence of more digits than normal. It may be associated with heart defects, single horseshoe-shaped kidney, short stature, undescended testes, and mild mental retardation.","definition_xrefs":["NCIT:C98873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrocephalopolysyndactyly","termid":"MONDO:0000078"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Carpenter syndrome","secondary_identifiers":["UMLS:C1275078","GARD:6003","MEDGEN:226897","NORD:897","icd11.foundation:2132713612","Orphanet:65759","NANDO:2200847","DOID:0060234","OMIMPS:201000","SCTID:403767009","SCTID:83728000"],"synonyms":[{"name":"ACPS2","type":"exact"},{"name":"Carpenter 's syndrome","type":"exact"},{"name":"Carpenter syndrome","type":"exact"},{"name":"acrocephalopolysyndactyly type 2","type":"exact"},{"name":"acrocephalopolysyndactyly type II","type":"exact"},{"name":"acrocephalosyndactyly, type II","type":"related"},{"name":"type II Acrocephalopolysyndactyly","type":"exact"}],"termid":"MONDO:0019012","xrefs":{"Monarch":{"xref_id":"0019012"}}}


id: PBO:0084016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycoprotein involved in cell wall beta-glucan assembly; null mutation leads to severe growth defects, aberrant multibudded morphology, and mating defects","termid":"PBO:0084016"}


id: GO:0048228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that establishes the spatial arrangement of actin cortical patches. An actin cortical patch is a discrete actin-containing structure found at the plasma membrane in fungal cells.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete actin cortical patch distribution (obsolete GO:0048228)","synonyms":[{"name":"actin cortical patch distribution","type":"exact"}],"termid":"GO:0048228"}


id: SO:0002311
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory_region including the Transcription Start Site (TSS) of a gene found in genes of viruses.","definition_xrefs":["GREEKC:cl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter","termid":"SO:0000167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viral_promoter","synonyms":[{"name":"viral promoter","type":"exact"}],"termid":"SO:0002311"}


id: GO:0015134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of hexuronates from one side of a membrane to the other. A hexuronate is any monocarboxylic acid derived from a hexose by oxidation of C-6.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uronic acid transmembrane transporter activity","termid":"GO:0015133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"hexuronate transmembrane transporter activity","secondary_identifiers":["GO:0015163"],"synonyms":[{"name":"hexuronide transmembrane transporter activity","type":"exact"}],"termid":"GO:0015134"}


id: GO:1990857
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An anaphase promoting complex bound to an activator in the Fzr1 (human)/Mfr1 (pombe) family.","definition_xrefs":["PMID:11493649"],"gene_count":0,"genotype_count":0,"name":"obsolete APC-Fzr1/Mfr1 complex (obsolete GO:1990857)","termid":"GO:1990857"}


id: PBO:0074456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase 1","termid":"PBO:0074456"}


id: PBO:0074009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 6","termid":"PBO:0074009"}


id: PBO:0078095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 3L","termid":"PBO:0078095"}


id: GO:2000051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of non-canonical Wnt signaling pathway.","definition_xrefs":["GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of Wnt signaling pathway","termid":"GO:0030178"},{"relation_name":"is_a","term_name":"regulation of non-canonical Wnt signaling pathway","termid":"GO:2000050"},{"relation_name":"negatively_regulates","term_name":"non-canonical Wnt signaling pathway","termid":"GO:0035567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of non-canonical Wnt signaling pathway","synonyms":[{"name":"negative regulation of beta-catenin-independent Wnt receptor signaling pathway","type":"exact"},{"name":"negative regulation of non-canonical Wnt receptor signaling pathway","type":"exact"},{"name":"negative regulation of non-canonical Wnt receptor signalling pathway","type":"exact"},{"name":"negative regulation of non-canonical Wnt-activated signaling pathway","type":"exact"}],"termid":"GO:2000051"}


id: MOD:00214
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-serine residue to the polymer dermatan 4-sulfate by a D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl tetrasaccharide.","definition_xrefs":["PubMed:2914936","PubMed:3472204","RESID:AA0209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"dermatan 4-sulfate D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine","synonyms":[{"name":"beta-heparin","type":"exact"},{"name":"chondroitin sulfate B","type":"exact"},{"name":"dermatan 4-sulfate D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine","type":"exact"},{"name":"poly[beta-1,4-L-idopyranuronosyl-alpha-1,3-(2-acetamido-2-deoxy-4-sulfate D-galactosyl)]-beta-1,4-D-glucopyranuronosyl-beta-1,3-D-galactosyl-beta-1,3-D-galactosyl-beta-1,4-D-xylosyl-beta-1,3-L-serine","type":"exact"}],"termid":"MOD:00214"}


id: PBO:0036051
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cell_cortex_of_cell_tip","termid":"PBO:0036051"}


id: PR:O59832
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC965.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized dipeptidase C965.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.12","synonyms":[{"name":"Spom972h-SPCC965.12","type":"exact"}],"termid":"PR:O59832"}


id: GO:0097084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a vascular smooth muscle cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell development","termid":"GO:0055001"},{"relation_name":"part_of","term_name":"vascular associated smooth muscle cell differentiation","termid":"GO:0035886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell development","synonyms":[{"name":"vascular smooth muscle cell development","type":"exact"}],"termid":"GO:0097084"}


id: GO:1990561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is deprived of copper ions.","definition_xrefs":["PMID:10593913","GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to copper ion starvation (obsolete GO:1990561)","termid":"GO:1990561"}


id: _global:starts_during
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"_global:temporally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"starts_during","secondary_identifiers":["RO:0002091"],"termid":"_global:starts_during"}


id: PBO:0085377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane arginine permease; requires phosphatidyl ethanolamine (PE) for localization, exclusively associated with lipid rafts; mutation confers canavanine resistance; CAN1 has a paralog, ALP1, that arose from the whole genome duplication","termid":"PBO:0085377"}


id: SO:0000740
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a plastid such as a chloroplast.","direct_ancestors":[{"relation_name":"is_a","term_name":"organelle_sequence","termid":"SO:0000736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastid_sequence","synonyms":[{"name":"plastid sequence","type":"exact"}],"termid":"SO:0000740"}


id: FYPO:0002592
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone phosphorylation does not occur. All histone phosphorylation may be affected, or phosphorylation of specific sites on specific histones may be abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"abolished histone phosphorylation during vegetative growth","synonyms":[{"name":"abolished histone phosphorylation during mitotic cell cycle","type":"related"},{"name":"histone phosphorylation abolished during vegetative growth","type":"exact"},{"name":"histone phosphorylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0002592"}


id: PBO:0064815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 6","termid":"PBO:0064815"}


id: PBO:0077482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 202","termid":"PBO:0077482"}


id: PBO:0055597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3033","termid":"PBO:0055597"}


id: PBO:0117396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC67A1 antisense RNA","termid":"PBO:0117396"}


id: PBO:0055520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2954","termid":"PBO:0055520"}


id: PBO:0004818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof12","termid":"PBO:0004818"}


id: GO:0030149
data:
  {"annotated_genes":["SJAG_00519","SJAG_01219"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91703,110792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046521"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"},{"relation_name":"is_a","term_name":"membrane lipid catabolic process","termid":"GO:0046466"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00519":null,"SJAG_01219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sphingolipid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9845614"],"synonyms":[{"name":"sphingolipid breakdown","type":"exact"},{"name":"sphingolipid catabolism","type":"exact"},{"name":"sphingolipid degradation","type":"exact"}],"termid":"GO:0030149","terms_by_termid":{"GO:0046521":null}}


id: GO:0042388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of gibberellic acid and dependent on the coupling of the alpha subunit of G proteins to the hormone receptors.","definition_xrefs":["GOC:pj","PMID:11027362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gibberellic acid mediated signaling pathway","termid":"GO:0009740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"gibberellic acid mediated signaling pathway, G-alpha-dependent","synonyms":[{"name":"gibberellic acid mediated signalling, G-alpha-dependent","type":"exact"}],"termid":"GO:0042388"}


id: GO:1990194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and RNA molecules to form a cytoplasmic U snRNP body.","definition_xrefs":["PMID:19464282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"cytoplasmic U snRNP body assembly","synonyms":[{"name":"U body assembly","type":"related"}],"termid":"GO:1990194"}


id: PBO:0003359
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally activates per1","termid":"PBO:0003359"}


id: FYPO:0005080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the centromere inner repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21151114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to centromeric heterochromatin","termid":"FYPO:0008154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to heterochromatin at centromere inner repeat","synonyms":[{"name":"normal protein localisation to chromatin at centromere inner repeat","type":"exact"},{"name":"normal protein localization to chromatin at centromere imr","type":"exact"},{"name":"normal protein localization to chromatin at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0005080"}


id: GO:0004583
data:
  {"annotated_genes":["SJAG_01950","SJAG_03764","SJAG_03656"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042283"},{"annotations":[70731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106073"},{"annotations":[78994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042281"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an alpha-D-glucosyl residue from dolichyl-phosphate D-glucose into a membrane lipid-linked oligosaccharide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01950":null,"SJAG_03656":null,"SJAG_03764":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-4724330","Reactome:R-HSA-446194","Reactome:R-HSA-4724291","Reactome:R-HSA-446189","Reactome:R-HSA-446202"],"termid":"GO:0004583","terms_by_termid":{"GO:0042281":null,"GO:0042283":null,"GO:0106073":null}}


id: PBO:0080665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 10B","termid":"PBO:0080665"}


id: MONDO:0014262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Loeys-Dietz syndrome-5 (LDS5), also known as Rienhoff (pronounced REENhoff) syndrome, is characterized by syndromic presentation of aortic aneurysms involving the thoracic and/or abdominal aorta, with risk of dissection and rupture. Other systemic features include cleft palate, bifid uvula, mitral valve disease, skeletal overgrowth, cervical spine instability, and clubfoot deformity; however, not all clinical features occur in all patients. In contrast to other forms of LDS, no striking aortic or arterial tortuosity is present in these patients, and there is no strong evidence for early aortic dissection.","definition_xrefs":["EFO:1000012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"Loeys-Dietz syndrome","termid":"MONDO:0018954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Rienhoff syndrome","secondary_identifiers":["UMLS:C3810012","DOID:0070236","OMIM:615582","GARD:12356","MEDGEN:816342"],"synonyms":[{"name":"LDS5","type":"related"},{"name":"Loeys-Dietz syndrome 5","type":"related"},{"name":"Loeys-Dietz syndrome type 5","type":"exact"},{"name":"Rienhoff syndrome","type":"exact"}],"termid":"MONDO:0014262","xrefs":{"Monarch":{"xref_id":"0014262"}}}


id: PBO:0027167
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_premeiotic_DNA_replication_initiation","termid":"PBO:0027167"}


id: GO:0048683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of collateral sprouting of an intact axon as a result of injury to an axon.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:lm","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of collateral sprouting","termid":"GO:0048670"},{"relation_name":"is_a","term_name":"regulation of axon regeneration","termid":"GO:0048679"},{"relation_name":"regulates","term_name":"collateral sprouting of intact axon in response to injury","termid":"GO:0048673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of collateral sprouting of intact axon in response to injury","termid":"GO:0048683"}


id: PBO:0077785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase II alpha","termid":"PBO:0077785"}


id: PBO:0045087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide S-succinyltransferase","termid":"PBO:0045087"}


id: FYECO:0000439
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which glycerophosphocholine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ glycerophosphocholine","secondary_identifiers":["PMID:38133430"],"termid":"FYECO:0000439"}


id: PBO:0046226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 19","termid":"PBO:0046226"}


id: GO:0010398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xylogalacturonan, a pectin characterized by a backbone of alpha-(1->4)-linked D-galacturonic acid residues substituted on C-3 with beta-D-xylopyranose residues.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galacturonan metabolic process","termid":"GO:0010393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"xylogalacturonan metabolic process","synonyms":[{"name":"xylogalacturonan metabolism","type":"exact"}],"termid":"GO:0010398"}


id: GO:0019299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving rhamnose, the hexose 6-deoxy-L-mannose. Rhamnose occurs commonly as a compound of plant glycosides, in polysaccharides of gums and mucilages, and in bacterial polysaccharides. It is also a component of some plant cell wall polysaccharides and frequently acts as the sugar components of flavonoids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"rhamnose metabolic process","synonyms":[{"name":"rhamnose metabolism","type":"exact"}],"termid":"GO:0019299"}


id: SO:0000205
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region at the 3' end of a mature transcript (following the stop codon) that is not translated into a protein.","direct_ancestors":[{"relation_name":"is_a","term_name":"UTR","termid":"SO:0000203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_UTR","secondary_identifiers":["http://en.wikipedia.org/wiki/Three_prime_untranslated_region"],"synonyms":[{"name":"INSDC_feature:3'UTR","type":"exact"},{"name":"three prime UTR","type":"exact"},{"name":"three prime untranslated region","type":"exact"}],"termid":"SO:0000205"}


id: GO:0047977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5Z,9E,14Z)-(8x,11R,12S)-11,12-epoxy-8-hydroxyicosa-5,9,14-trienoate + H2O = (5Z,9E,14Z)-(8x,11x,12S)-8,11,12-trihydroxyicosa-5,9,14-trienoate.","definition_xrefs":["EC:3.3.2.7","MetaCyc:HEPOXILIN-EPOXIDE-HYDROLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epoxide hydrolase activity","termid":"GO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"hepoxilin-epoxide hydrolase activity","secondary_identifiers":["Reactome:R-HSA-2161949","RHEA:16665"],"synonyms":[{"name":"(5Z,9E,14Z)-(8xi,11R,12S)-11,12-epoxy-8-hydroxyicosa-5,9,14-trienoate hydrolase activity","type":"related"},{"name":"hepoxilin A(3) hydrolase activity","type":"related"},{"name":"hepoxilin A3 hydrolase activity","type":"related"},{"name":"hepoxilin epoxide hydrolase activity","type":"related"},{"name":"hepoxylin hydrolase activity","type":"related"}],"termid":"GO:0047977"}


id: GO:1904898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hepatic stellate cell proliferation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15358192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fibroblast proliferation","termid":"GO:0048147"},{"relation_name":"is_a","term_name":"regulation of hepatic stellate cell proliferation","termid":"GO:1904897"},{"relation_name":"negatively_regulates","term_name":"hepatic stellate cell proliferation","termid":"GO:1990922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hepatic stellate cell proliferation","synonyms":[{"name":"down regulation of Ito cell proliferation","type":"exact"},{"name":"down regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"down regulation of hepatic stellate cell proliferation","type":"exact"},{"name":"down regulation of perisinusoidal cell proliferation","type":"exact"},{"name":"down-regulation of Ito cell proliferation","type":"exact"},{"name":"down-regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"down-regulation of hepatic stellate cell proliferation","type":"exact"},{"name":"down-regulation of perisinusoidal cell proliferation","type":"exact"},{"name":"downregulation of Ito cell proliferation","type":"exact"},{"name":"downregulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"downregulation of hepatic stellate cell proliferation","type":"exact"},{"name":"downregulation of perisinusoidal cell proliferation","type":"exact"},{"name":"inhibition of Ito cell proliferation","type":"narrow"},{"name":"inhibition of hepatic perisinusoidal cell proliferation","type":"narrow"},{"name":"inhibition of hepatic stellate cell proliferation","type":"narrow"},{"name":"inhibition of perisinusoidal cell proliferation","type":"narrow"},{"name":"negative regulation of Ito cell proliferation","type":"exact"},{"name":"negative regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"negative regulation of perisinusoidal cell proliferation","type":"exact"}],"termid":"GO:1904898"}


id: PBO:0072587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing 9, U3 small nucleolar RNA binding protein","termid":"PBO:0072587"}


id: _global:positively_regulated_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of positively regulates","direct_ancestors":[{"relation_name":"is_a","term_name":"regulated_by","termid":"_global:regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positively_regulated_by","secondary_identifiers":["RO:0002336"],"termid":"_global:positively_regulated_by"}


id: PBO:0085299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pheromone-regulated protein, predicted to have 1 transmembrane segment; induced during cell integrity signaling; PRM5 has a paralog, YNL058C, that arose from the whole genome duplication","termid":"PBO:0085299"}


id: MONDO:0021093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cranioectodermal dysplasia in which the cause of the disease is a mutation in the IFT122 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranioectodermal dysplasia","termid":"MONDO:0009032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025","MONDO:0005093","MONDO:0005497"],"is_obsolete":false,"name":"cranioectodermal dysplasia 1","secondary_identifiers":["DOID:0080803","OMIM:218330","MEDGEN:96586","UMLS:C0432235"],"synonyms":[{"name":"CED1","type":"exact"},{"name":"IFT122 cranioectodermal dysplasia","type":"exact"},{"name":"Levin syndrome 1","type":"related"},{"name":"Sensenbrenner syndrome","type":"broad"},{"name":"cranioectodermal dysplasia 1","type":"exact"},{"name":"cranioectodermal dysplasia caused by mutation in IFT122","type":"exact"},{"name":"cranioectodermal dysplasia type 1","type":"exact"}],"termid":"MONDO:0021093","xrefs":{"Monarch":{"xref_id":"0021093"}}}


id: GO:0004771
data:
  {"annotated_genes":["SJAG_04790","SJAG_00158","SJAG_02068"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76762,76913,79180],"is_not":false,"summary":null,"term":"GO:0004771"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a sterol ester + H2O = a fatty acid + a sterol + H+.","definition_xrefs":["RHEA:10100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_02068":null,"SJAG_04790":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"sterol ester esterase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-192417","EC:3.1.1.13","MetaCyc:STEROL-ESTERASE-RXN","Reactome:R-HSA-6813720","Reactome:R-HSA-8865667"],"synonyms":[{"name":"acylcholesterol lipase activity","type":"related"},{"name":"cholesterase activity","type":"related"},{"name":"cholesterol ester hydrolase activity","type":"related"},{"name":"cholesterol ester synthase activity","type":"narrow"},{"name":"cholesterol esterase activity","type":"narrow"},{"name":"cholesteryl ester hydrolase activity","type":"related"},{"name":"cholesteryl ester synthase activity","type":"related"},{"name":"cholesteryl esterase activity","type":"related"},{"name":"sterol ester hydrolase activity","type":"related"},{"name":"sterol esterase activity","type":"exact"},{"name":"steryl-ester acylhydrolase activity","type":"related"},{"name":"triterpenol esterase activity","type":"related"}],"termid":"GO:0004771","terms_by_termid":{"GO:0004771":null}}


id: GO:0010297
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a heteropolysaccharide, a glycan composed of more than one type of monosaccharide residue.","definition_xrefs":["PMID:16640603"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"heteropolysaccharide binding","synonyms":[{"name":"heteroglycan binding","type":"exact"}],"termid":"GO:0010297"}


id: PBO:0002838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF4A (predicted)","termid":"PBO:0002838"}


id: FYPO:0002621
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of malate dehydrogenase (decarboxylating) (NAD+) activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal malate dehydrogenase (decarboxylating) (NAD+) activity","synonyms":[{"name":"abnormal 'malic' enzyme activity","type":"related"},{"name":"abnormal (S)-malate:NAD+ oxidoreductase (oxaloacetate-decarboxylating) activity","type":"exact"},{"name":"abnormal NAD-linked malic enzyme activity","type":"related"},{"name":"abnormal NAD-malic enzyme activity","type":"broad"},{"name":"abnormal NAD-specific malic enzyme activity","type":"related"},{"name":"abnormal malate dehydrogenase (oxaloacetate-decarboxylating) activity","type":"exact"}],"termid":"FYPO:0002621"}


id: GO:0002116
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stable binary complex of a semaphorin and a plexin, together forming a functional semaphorin receptor.","definition_xrefs":["GOC:hjd","PMID:12367632","PMID:12613544","PMID:10934324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"semaphorin receptor complex","synonyms":[{"name":"plexin-neurophilin complex","type":"exact"}],"termid":"GO:0002116"}


id: PBO:0050081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 1 pseudogene 1","termid":"PBO:0050081"}


id: PBO:0060481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox pseudogene 3","termid":"PBO:0060481"}


id: MONDO:1011416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Calcinosis circumscripta that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcinosis circumscripta, non-human animal","secondary_identifiers":["OMIA:000158"],"termid":"MONDO:1011416","xrefs":{"Monarch":{"xref_id":"1011416"}}}


id: PBO:0083299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps 3' end of ORF ASI1/YMR119W","termid":"PBO:0083299"}


id: GO:0099151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynaptic density assembly, the aggregation, arrangement and bonding together of a set of components to form a postsynaptic density.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic specialization assembly","termid":"GO:0099150"},{"relation_name":"is_a","term_name":"regulation of excitatory synapse assembly","termid":"GO:1904889"},{"relation_name":"is_a","term_name":"regulation of postsynaptic density organization","termid":"GO:1905874"},{"relation_name":"regulates","term_name":"postsynaptic density assembly","termid":"GO:0097107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of postsynaptic density assembly","termid":"GO:0099151"}


id: GO:0033404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UUG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723","GO:0060090"],"is_obsolete":false,"name":"UUG codon-amino acid adaptor activity","synonyms":[{"name":"TTG codon-amino acid adaptor activity","type":"exact"},{"name":"leucine tRNA","type":"related"}],"termid":"GO:0033404"}


id: MONDO:1012135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin M deficiency, non-human animal","termid":"MONDO:1011729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin M deficiency, horse","secondary_identifiers":["OMIA:000556-9796"],"termid":"MONDO:1012135","xrefs":{"Monarch":{"xref_id":"1012135"}}}


id: PBO:0070688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 59","termid":"PBO:0070688"}


id: FYPO:0003195
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell differs from normal during a cellular response to phosphate starvation. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"altered RNA level during cellular response to phosphate starvation","synonyms":[{"name":"abnormal RNA level during cellular response to phosphate starvation","type":"exact"},{"name":"altered RNA level during cellular response to phosphate starvation during mitotic cell cycle","type":"related"},{"name":"altered RNA level during cellular response to phosphate starvation during vegetative growth","type":"exact"},{"name":"altered RNA level during phosphate starvation","type":"exact"},{"name":"altered cellular RNA level during cellular response to phosphate starvation","type":"exact"},{"name":"altered transcript level during cellular response to phosphate starvation","type":"exact"}],"termid":"FYPO:0003195"}


id: PBO:0040844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bleomycin hydrolase","termid":"PBO:0040844"}


id: PBO:0028069
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-aggregated_mtDNA","termid":"PBO:0028069"}


id: MONDO:0021631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A astrocytoma (excluding glioblastoma) that involves the brain.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocytoma (excluding glioblastoma)","termid":"MONDO:0019781"},{"relation_name":"is_a","term_name":"primary brain neoplasm","termid":"MONDO:0021632"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain astrocytoma","secondary_identifiers":["NCIT:C60780","MEDGEN:811330","SCTID:254938000","UMLS:C3695127"],"synonyms":[{"name":"astrocytoma (excluding glioblastoma) of brain","type":"exact"},{"name":"brain astrocytoma","type":"exact"},{"name":"brain astrocytoma (excluding glioblastoma)","type":"exact"}],"termid":"MONDO:0021631","xrefs":{"Monarch":{"xref_id":"0021631"}}}


id: MONDO:0002926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant neoplasm with melanocytic differentiation characterized by the presence of polygonal or spindle shaped clear cells. This sarcoma usually affects the tendons and aponeuroses and is associated with a poor prognosis due to recurrences and metastases.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"clear cell sarcoma","secondary_identifiers":["MESH:D018227","NANDO:2200062","ONCOTREE:CCS","SCTID:402561003","MEDGEN:104909","UMLS:C0206651","NCIT:C3745","EFO:0008498","ICD9:171.9","DOID:4233","ICDO:9044/3"],"synonyms":[{"name":"adult soft part clear cell sarcoma","type":"exact"},{"name":"chordoid sarcoma","type":"exact"},{"name":"clear cell sarcoma (morphologic abnormality)","type":"exact"},{"name":"clear cell sarcoma - not kidney","type":"exact"},{"name":"clear cell sarcoma of soft parts","type":"exact"},{"name":"clear cell sarcoma of soft tissue","type":"exact"},{"name":"clear cell sarcoma/malignant melanoma of soft parts (excluding clear cell sarcoma of the kidney)","type":"exact"},{"name":"malignant melanoma of soft parts","type":"related"},{"name":"malignant melanoma of soft tissues","type":"exact"},{"name":"malignant melanoma of the soft parts","type":"exact"},{"name":"melanoma, malignant, of soft parts","type":"exact"}],"termid":"MONDO:0002926","xrefs":{"Monarch":{"xref_id":"0002926"}}}


id: GO:0031231
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the peroxisomal membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of peroxisomal membrane (obsolete GO:0031231)","synonyms":[{"name":"intrinsic to peroxisomal membrane","type":"narrow"}],"termid":"GO:0031231"}


id: PBO:0004159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-isopropylmalate synthase Leu3","termid":"PBO:0004159"}


id: GO:1904498
data:
  {"annotated_genes":["SJAG_00279","SJAG_04703"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94208,120673],"is_not":false,"summary":null,"term":"GO:1904498"}]},"cv_name":"biological_process","definition":"Any protein localization to actomyosin contractile ring that is involved in mitotic cytokinesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:25688133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"is_a","term_name":"protein localization to actomyosin contractile ring","termid":"GO:1990179"},{"relation_name":"part_of","term_name":"mitotic cytokinesis","termid":"GO:0000281"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0007049","GO:0000281"],"is_obsolete":false,"name":"protein localization to mitotic actomyosin contractile ring","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to actomyosin contractile ring involved in cytokinesis after mitosis","type":"exact"},{"name":"protein localisation to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"protein localization to actomyosin contractile ring during mitotic cytokinesis","type":"related"},{"name":"protein localization to actomyosin contractile ring involved in cytokinesis after mitosis","type":"exact"},{"name":"protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"}],"termid":"GO:1904498","terms_by_termid":{"GO:1904498":null}}


id: PR:Q10368
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22E12.18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22E12.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.18","synonyms":[{"name":"Spom972h-SPAC22E12.18","type":"exact"}],"termid":"PR:Q10368"}


id: PBO:0011429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Tgs1 (predicted)","termid":"PBO:0011429"}


id: PBO:0082686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the GARP (Golgi-associated retrograde protein) complex; GARP is required for the recycling of proteins from endosomes to the late Golgi, and for mitosis after DNA damage induced checkpoint arrest; links the (VFT/GARP) complex to the SNARE Tlg1p; members of the GARP complex are Vps51p-Vps52p-Vps53p-Vps54p","termid":"PBO:0082686"}


id: MONDO:0017736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease","termid":"MONDO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"disorder of sialic acid metabolism","secondary_identifiers":["Orphanet:309319","UMLS:C0342851","MEDGEN:575253","icd11.foundation:1709765980","SCTID:238050009","GARD:21332","ICD9:277.89"],"termid":"MONDO:0017736","xrefs":{"Monarch":{"xref_id":"0017736"}}}


id: MONDO:0001288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Endometriosis that affects the vagina. It is characterized by the presence of endometrial stroma with or without endometrial-type glands in the vagina.","definition_xrefs":["NCIT:C128064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometriosis","termid":"MONDO:0005133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometriosis of rectovaginal septum and vagina","secondary_identifiers":["MEDGEN:510250","ICD9:617.4","DOID:11431","UMLS:C0156346","ICD10CM:N80.4","SCTID:198253003"],"synonyms":[{"name":"vaginal endometriosis","type":"exact"}],"termid":"MONDO:0001288","xrefs":{"Monarch":{"xref_id":"0001288"}}}


id: GO:0019166
data:
  {"annotated_genes":["SJAG_02717"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113310],"is_not":false,"summary":null,"term":"GO:0019166"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + NADP+ = trans-2,3-dehydroacyl-CoA + NADPH + H+.","definition_xrefs":["EC:1.3.1.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"trans-2-enoyl-CoA reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:TRANSENOYLCOARED-RXN","Reactome:R-HSA-6809810","Reactome:R-HSA-6786720","Reactome:R-HSA-8952873","RHEA:33763"],"synonyms":[{"name":"NADPH-dependent trans-2-enoyl-CoA reductase activity","type":"related"},{"name":"acyl-CoA:NADP+ trans-2-oxidoreductase activity","type":"related"},{"name":"reductase, trans-enoyl coenzyme A","type":"related"}],"termid":"GO:0019166","terms_by_termid":{"GO:0019166":null}}


id: GO:0050276
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-amino-1-deoxy-scyllo-inositol + ATP = 1-amino-1-deoxy-scyllo-inositol 4-phosphate + ADP + 2 H+.","definition_xrefs":["RHEA:18605","EC:2.7.1.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"scyllo-inosamine 4-kinase activity","secondary_identifiers":["MetaCyc:SCYLLO-INOSAMINE-KINASE-RXN","KEGG_REACTION:R03384"],"synonyms":[{"name":"ATP:1-amino-1-deoxy-scyllo-inositol 4-phosphotransferase activity","type":"related"},{"name":"ATP:inosamine phosphotransferase activity","type":"related"},{"name":"scyllo-inosamine kinase (phosphorylating)","type":"related"},{"name":"scyllo-inosamine kinase activity","type":"exact"}],"termid":"GO:0050276"}


id: PBO:0043011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline kinase alpha","termid":"PBO:0043011"}


id: PBO:0049191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor AMPA type subunit 2","termid":"PBO:0049191"}


id: SO:0001446
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polar, hydorophilic amino acid encoded by the codons TAT and TAC.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine","synonyms":[{"name":"Tyr","type":"exact"},{"name":"Y","type":"exact"}],"termid":"SO:0001446"}


id: GO:0070443
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcriptional repressor complex that consists of a heterodimer of the bHLH-ZIP proteins Mad and Max.","definition_xrefs":["PMID:8224841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription repressor complex","termid":"GO:0090571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"Mad-Max complex","termid":"GO:0070443"}


id: PBO:0091634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sub-telomeric 5Tm protein family Ftm3","termid":"PBO:0091634"}


id: PR:G2TRN9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.11c gene.","definition_xrefs":["UniProtKB:G2TRN9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C11D3.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.11c","synonyms":[{"name":"Spom972h-SPAC11D3.11c","type":"exact"}],"termid":"PR:G2TRN9"}


id: GO:0015545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of bicyclomycin from one side of a membrane to the other. Bicyclomycin (or bicozamycin) is an antibacterial drug often used as a livestock feed additive.","definition_xrefs":["ISBN:091191028X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"bicyclomycin transmembrane transporter activity","synonyms":[{"name":"bicyclomycin transporter activity","type":"related"},{"name":"bicyclomycin/sulfathiazole:hydrogen antiporter activity","type":"related"}],"termid":"GO:0015545"}


id: MONDO:0005293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anatomic deformity in which the arch of the foot collapses, resulting in the entire sole of the foot coming into complete or near-complete contact with the ground.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flatfoot","secondary_identifiers":["ICD9:734","MEDGEN:42034","EFO:0003874","MESH:D005413","NCIT:C34616","SCTID:53226007","UMLS:C0016202"],"synonyms":[{"name":"fallen Arch","type":"exact"},{"name":"flat Foot","type":"exact"}],"termid":"MONDO:0005293","xrefs":{"Monarch":{"xref_id":"0005293"}}}


id: GO:0032167
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An amorphous-appearing accumulation of septin proteins at the future site of cytokinesis.","definition_xrefs":["PMID:16009555"],"gene_count":0,"genotype_count":0,"name":"obsolete septin patch (obsolete GO:0032167)","synonyms":[{"name":"septin patch","type":"exact"}],"termid":"GO:0032167"}


id: MOD:01139
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dioctyl phthalate sodium adduct","termid":"MOD:01139"}


id: PBO:0056558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance complex component 6","termid":"PBO:0056558"}


id: PATO:0002150
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved outwards from the part of the body from which the tail arises.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splayed","termid":"PATO:0001785"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splayed caudal","synonyms":[{"name":"splayed inferior (human torso)","type":"exact"},{"name":"splayed posterior","type":"exact"}],"termid":"PATO:0002150"}


id: GO:0000243
data:
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id: PBO:0077782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase I mitochondrial","termid":"PBO:0077782"}


id: PBO:0065311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 33","termid":"PBO:0065311"}


id: GO:0042922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to one or more specific sites on a neuromedin U receptor.","definition_xrefs":["PMID:10899166","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"neuromedin U receptor binding","termid":"GO:0042922"}


id: MONDO:1012979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inborn errors of metabolism that occur in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979","xrefs":{"Monarch":{"xref_id":"1012979"}}}


id: GO:0044642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of complement activation via the alternative pathway in the bitten/stung organism.","definition_xrefs":["GOC:jl","GOC:fj","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in modulation of complement activation, alternative pathway in another organism (obsolete GO:0044642)","synonyms":[{"name":"envenomation resulting in modulation of complement activation, alternative pathway in other organism","type":"exact"},{"name":"envenomation resulting in regulation of complement activation, alternative pathway in other organism","type":"exact"}],"termid":"GO:0044642"}


id: PBO:0091853
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"equivalent function in S. cerevisiae is performed by STE12, but this is STE-like, not HMG","termid":"PBO:0091853"}


id: PBO:0116305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation termination factor eRF3; has a role in mRNA deadenylation and decay; altered protein conformation creates the [PSI(+)] prion, self-perpetuating amyloid fibrils that modify cellular fitness, alter translational fidelity by affecting reading frame selection, and result in a nonsense suppressor phenotype; forms reversible liquid condensates in response to both acidic and osmotic stress to promote survival; many stress-response genes are repressed in the presence of [PSI(+)]","termid":"PBO:0116305"}


id: MONDO:0016431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of axonal Charcot-Marie-Tooth disease, a peripheral motor and sensory neuropathy. CMT2M is characterized by congenital ptosis and early cataract associated to a mildly progressive peripheral neuropathy of variable onset from birth to the 6th decade, pes cavus, reduced to absent ankles tendon reflexes and sometimes neutropenia.","definition_xrefs":["Orphanet:228179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease dominant intermediate B","termid":"MONDO:0011674"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant Charcot-Marie-Tooth disease type 2M","secondary_identifiers":["SCTID:719514002","MEDGEN:930341","UMLS:C4304672","GARD:17147","icd11.foundation:1601555981"],"synonyms":[{"name":"CMT2M","type":"exact"}],"termid":"MONDO:0016431","xrefs":{"Monarch":{"xref_id":"0016431"}}}


id: PBO:0077119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 50","termid":"PBO:0077119"}


id: PBO:0000325
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.25.1","termid":"PBO:0000325"}


id: MONDO:0005070
data:
  {"annotated_genes":["SJAG_00991","SJAG_04394","SJAG_03720","SJAG_04884","SJAG_00289","SJAG_01620","SJAG_00997","SJAG_05979","SJAG_02426","SJAG_00579","SJAG_02398","SJAG_00980","SJAG_02855","SJAG_00079","SJAG_03081","SJAG_04206","SJAG_00260","SJAG_02049","SJAG_01111","SJAG_04885","SJAG_01151","SJAG_05346","SJAG_02226","SJAG_01013","SJAG_03787","SJAG_03131","SJAG_03905","SJAG_02460","SJAG_00490","SJAG_04067","SJAG_02748","SJAG_03920","SJAG_01548","SJAG_03163","SJAG_03429","SJAG_03881","SJAG_00229","SJAG_01419","SJAG_04287","SJAG_01144","SJAG_04699","SJAG_03576","SJAG_01970","SJAG_01671","SJAG_03677","SJAG_01156","SJAG_01837","SJAG_04755","SJAG_01748","SJAG_00757","SJAG_01008","SJAG_04114","SJAG_00031","SJAG_02261","SJAG_00440","SJAG_03689","SJAG_04502","SJAG_03424","SJAG_02231","SJAG_01082","SJAG_01410","SJAG_01895","SJAG_01349","SJAG_02187","SJAG_04213","SJAG_03453","SJAG_02527","SJAG_05313"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89067,89221,89064,89065,89222,89066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[88131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011655"},{"annotations":[89025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"},{"annotations":[87522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007154"},{"annotations":[87995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0002629"},{"annotations":[87156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[88310,88315,89190,88314,88308,88311,88312,88309,88313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005575"},{"annotations":[88567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[88628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007205"},{"annotations":[86852,89121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011962"},{"annotations":[89150,89151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011789"},{"annotations":[87665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015278"},{"annotations":[88902,88903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0001056"},{"annotations":[88646,88645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011719"},{"annotations":[88477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007256"},{"annotations":[89178,88029,89177,88030,88026,88027,89179,89180,89181,88028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016419"},{"annotations":[87989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0003789"},{"annotations":[88979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032747"},{"annotations":[87490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007767"},{"annotations":[87491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007768"},{"annotations":[88631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044792"},{"annotations":[87708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"},{"annotations":[88643,89196,88644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008903"},{"annotations":[88779,88777,88778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011705"},{"annotations":[88010,88011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011508"},{"annotations":[88200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007356"},{"annotations":[87014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012249"},{"annotations":[87464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013699"},{"annotations":[87466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013710"},{"annotations":[89198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007959"},{"annotations":[87476,87477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008018"},{"annotations":[88522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"},{"annotations":[87493,87494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018881"},{"annotations":[87545,87544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007925"},{"annotations":[87287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009578"},{"annotations":[86848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008093"},{"annotations":[88618,88617,88616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007763"},{"annotations":[88329,88330,88328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008170"},{"annotations":[87669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008192"},{"annotations":[88876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[88776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011544"},{"annotations":[87456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[87666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"},{"annotations":[89023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032771"},{"annotations":[87703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012004"},{"annotations":[89186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009693"},{"annotations":[88180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"},{"annotations":[88468,88466,88467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0700275"},{"annotations":[89172,89173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013872"},{"annotations":[87008,87009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012252"},{"annotations":[89184,89185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"},{"annotations":[88784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859046"},{"annotations":[89169,89170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"},{"annotations":[87680,89158,89159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008566"},{"annotations":[88118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0001187"}]},"cv_name":"mondo","definition":"A benign or malignant tissue growth resulting from uncontrolled cell proliferation. Benign neoplastic cells resemble normal cells without exhibiting significant cytologic atypia, while malignant cells exhibit overt signs such as dysplastic features, atypical mitotic figures, necrosis, nuclear pleomorphism, and anaplasia. Representative examples of benign neoplasms include papillomas, cystadenomas, and lipomas; malignant neoplasms include carcinomas, sarcomas, lymphomas, and leukemias.","definition_xrefs":["NCIT:C3262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic disease or syndrome","termid":"MONDO:0023370"}],"gene_count":68,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00079":null,"SJAG_00229":null,"SJAG_00260":null,"SJAG_00289":null,"SJAG_00440":null,"SJAG_00490":null,"SJAG_00579":null,"SJAG_00757":null,"SJAG_00980":null,"SJAG_00991":null,"SJAG_00997":null,"SJAG_01008":null,"SJAG_01013":null,"SJAG_01082":null,"SJAG_01111":null,"SJAG_01144":null,"SJAG_01151":null,"SJAG_01156":null,"SJAG_01349":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01548":null,"SJAG_01620":null,"SJAG_01671":null,"SJAG_01748":null,"SJAG_01837":null,"SJAG_01895":null,"SJAG_01970":null,"SJAG_02049":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02231":null,"SJAG_02261":null,"SJAG_02398":null,"SJAG_02426":null,"SJAG_02460":null,"SJAG_02527":null,"SJAG_02748":null,"SJAG_02855":null,"SJAG_03081":null,"SJAG_03131":null,"SJAG_03163":null,"SJAG_03424":null,"SJAG_03429":null,"SJAG_03453":null,"SJAG_03576":null,"SJAG_03677":null,"SJAG_03689":null,"SJAG_03720":null,"SJAG_03787":null,"SJAG_03881":null,"SJAG_03905":null,"SJAG_03920":null,"SJAG_04067":null,"SJAG_04114":null,"SJAG_04206":null,"SJAG_04213":null,"SJAG_04287":null,"SJAG_04394":null,"SJAG_04502":null,"SJAG_04699":null,"SJAG_04755":null,"SJAG_04884":null,"SJAG_04885":null,"SJAG_05313":null,"SJAG_05346":null,"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:239.8","MEDGEN:10294","ONCOTREE:OTHER","SCTID:55342001","ICD10CM:C00-D49","EFO:0000616","ICD10CM:C7A-C7A","ICD10CM:C7B-C7B","HP:0002664","MESH:D009369","DOID:14566","ICD9:239.9","UMLS:C0027651","ICD9:140-239.99"],"synonyms":[{"name":"cell process disease","type":"broad"},{"name":"disease of cellular proliferation","type":"exact"},{"name":"neoplasia","type":"exact"},{"name":"neoplasm","type":"exact"},{"name":"neoplasm (disease)","type":"exact"},{"name":"neoplastic disease","type":"exact"},{"name":"neoplastic growth","type":"exact"},{"name":"other neoplasm","type":"narrow"},{"name":"tumor","type":"exact"},{"name":"tumor disease","type":"exact"},{"name":"tumour","type":"exact"},{"name":"tumour disease","type":"exact"}],"termid":"MONDO:0005070","terms_by_termid":{"MONDO:0001056":null,"MONDO:0001187":null,"MONDO:0002629":null,"MONDO:0003789":null,"MONDO:0005575":null,"MONDO:0007154":null,"MONDO:0007205":null,"MONDO:0007256":null,"MONDO:0007273":null,"MONDO:0007356":null,"MONDO:0007763":null,"MONDO:0007767":null,"MONDO:0007768":null,"MONDO:0007908":null,"MONDO:0007925":null,"MONDO:0007959":null,"MONDO:0008018":null,"MONDO:0008093":null,"MONDO:0008097":null,"MONDO:0008170":null,"MONDO:0008192":null,"MONDO:0008566":null,"MONDO:0008903":null,"MONDO:0009050":null,"MONDO:0009578":null,"MONDO:0009693":null,"MONDO:0010621":null,"MONDO:0011014":null,"MONDO:0011121":null,"MONDO:0011508":null,"MONDO:0011544":null,"MONDO:0011655":null,"MONDO:0011705":null,"MONDO:0011719":null,"MONDO:0011789":null,"MONDO:0011962":null,"MONDO:0012004":null,"MONDO:0012249":null,"MONDO:0012252":null,"MONDO:0013224":null,"MONDO:0013602":null,"MONDO:0013699":null,"MONDO:0013710":null,"MONDO:0013872":null,"MONDO:0014937":null,"MONDO:0015278":null,"MONDO:0016419":null,"MONDO:0018874":null,"MONDO:0018881":null,"MONDO:0024517":null,"MONDO:0032747":null,"MONDO:0032771":null,"MONDO:0044792":null,"MONDO:0700275":null,"MONDO:0859046":null},"xrefs":{"Monarch":{"xref_id":"0005070"}}}


id: MONDO:0016291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniosynostosis, Herrmann-Opitz type is a rare bone development disorder characterized by intellectual disability, short stature, turribrachycephaly, facial dysmorphism (i.e. severe hypertelorism, hypoplasia of supraorbital ridges, abnormal ears, and micrognathia), bony defects of the occiput, and digital anomalies (incl. syndactyly, oligodactyly, and/or brachydactyly). Urethral atresia has also been reported. There have been no further descriptions in the literature since 1987.","definition_xrefs":["Orphanet:2145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis, Herrmann-Opitz type","secondary_identifiers":["GARD:18762","icd11.foundation:2048918601","UMLS:C4706536","MEDGEN:1633959"],"synonyms":[{"name":"Herrmann Opitz craniosynostosis","type":"related"}],"termid":"MONDO:0016291","xrefs":{"Monarch":{"xref_id":"0016291"}}}


id: PR:Q10485
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pex19 gene.","definition_xrefs":["UniProtKB:Q10485","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17C9.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.14","synonyms":[{"name":"Spom972h-pex19","type":"exact"}],"termid":"PR:Q10485"}


id: PBO:0109123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gfo/Idh/MocA-like oxidoreductase domain containing 3, pseudogene","termid":"PBO:0109123"}


id: GO:0110064
data:
  {"annotated_genes":["SJAG_02622"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180036"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lncRNAs, non-coding RNAs over 200 nucleotides in length.","definition_xrefs":["GOC:al","PMID:24493644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lncRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"lncRNA breakdown","type":"exact"},{"name":"lncRNA catabolism","type":"exact"},{"name":"lncRNA degradation","type":"exact"}],"termid":"GO:0110064","terms_by_termid":{"GO:0180036":null}}


id: GO:0010373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of gibberellins.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gibberellin biosynthetic process","termid":"GO:0010371"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"gibberellin biosynthetic process","termid":"GO:0009686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gibberellin biosynthetic process","synonyms":[{"name":"negative regulation of gibberellic acid biosynthetic process","type":"narrow"}],"termid":"GO:0010373"}


id: MONDO:0100087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A degenerative disease of the brain that causes gradual loss of memory, judgment, and the ability to function socially. About 25% of all Alzheimer disease is familial (more than 2 people in a family have AD). When Alzheimer disease begins before 60 or 65 years of age (early-onset AD) about 60% of the cases are familial (also known as Early-onset familial AD). These cases appear to be inherited in an autosomal dominant manner.","definition_xrefs":["GARD:0000632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alzheimer disease","termid":"MONDO:0004975"},{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"familial Alzheimer disease","secondary_identifiers":["MEDGEN:82914","UMLS:C0276496"],"synonyms":[{"name":"Alzheimer disease, familial","type":"exact"},{"name":"FAD","type":"exact"},{"name":"GARD:0000632","type":"exact"}],"termid":"MONDO:0100087","xrefs":{"Monarch":{"xref_id":"0100087"}}}


id: MONDO:0100497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A prenatal/infant-onset muscle disorder characterized by limb contractures, muscle weakness (often with significant axial involvement), long bone fractures, and/or cardiac abnormalities.","definition_xrefs":["PMID:24105469","PMID:28040389","PMID:29691892","PMID:31660661","PMID:29575618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive titinopathy","termid":"MONDO:0100493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"titinopathy with congenital contractures","termid":"MONDO:0100497","xrefs":{"Monarch":{"xref_id":"0100497"}}}


id: PBO:0043683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell fate and sterol metabolism associated divergent transcript of MOCOS","termid":"PBO:0043683"}


id: GO:0072361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of glycolysis by modulating the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:mah","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glycolytic process by regulation of transcription from RNA polymerase II promoter (obsolete GO:0072361)","termid":"GO:0072361"}


id: PBO:0058046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4267","termid":"PBO:0058046"}


id: GO:0140617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An epigenetic regulation of transcription by physical interaction between a cis-acting element (enhancer, silencer) of one allele on one chromosome and the promoter of the corresponding allele on the homologous chromosome. Transvection can lead to either gene activation or repression.","definition_xrefs":["PMID:24236213","PMID:33479152"],"gene_count":0,"genotype_count":0,"name":"obsolete transvection (obsolete GO:0140617)","termid":"GO:0140617"}


id: PBO:0039489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A12, pseudogene","termid":"PBO:0039489"}


id: PBO:0068368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 151","termid":"PBO:0068368"}


id: GO:0060330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a response to type II interferon (interferon-gamma). Response to interferon gamma is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"is_a","term_name":"regulation of response to cytokine stimulus","termid":"GO:0060759"},{"relation_name":"regulates","term_name":"response to type II interferon","termid":"GO:0034341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to type II interferon","synonyms":[{"name":"regulation of response to gamma-interferon","type":"related"},{"name":"regulation of response to immune interferon","type":"exact"},{"name":"regulation of response to interferon-gamma","type":"broad"},{"name":"regulation of response to type II IFN","type":"exact"}],"termid":"GO:0060330"}


id: GO:1902007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of toxin transport.","definition_xrefs":["GOC:dph","PMID:22792315","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of toxin transport (obsolete GO:1902007)","termid":"GO:1902007"}


id: PBO:0073987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 1 pseudogene 1","termid":"PBO:0073987"}


id: SO:0000009
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000009 gene_class (obsolete SO:0000009)","termid":"SO:0000009"}


id: GO:0150007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Clathrin-dependent endocytosis of presynaptic membrane regions comprising synaptic vesicles' membrane constituents. This is a relatively slow process occurring in the range of tens of seconds.","definition_xrefs":["PMID:27252645","PMID:16982422","GOC:aruk","PMID:26430111","PMID:18579735","PMID:28391090","PMID:4348786","PMID:18579748","GOC:bc","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"is_a","term_name":"synaptic vesicle endocytosis","termid":"GO:0048488"},{"relation_name":"is_a","term_name":"clathrin-dependent endocytosis","termid":"GO:0072583"},{"relation_name":"part_of","term_name":"synaptic vesicle recycling via endosome","termid":"GO:0036466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"clathrin-dependent synaptic vesicle endocytosis","termid":"GO:0150007"}


id: GO:0070257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of mucus from a cell or a tissue.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of mucus secretion","termid":"GO:0070255"},{"relation_name":"positively_regulates","term_name":"mucus secretion","termid":"GO:0070254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mucus secretion","synonyms":[{"name":"positive regulation of mucus production","type":"exact"}],"termid":"GO:0070257"}


id: PBO:0064893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit B''beta","termid":"PBO:0064893"}


id: PBO:0004615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg8","termid":"PBO:0004615"}


id: GO:0015431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + glutathione S-conjugate(in) -> ADP + phosphate + glutathione S-conjugate(out).","definition_xrefs":["PMID:1455517","RHEA:19121","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type glutathione S-conjugate transporter activity","secondary_identifiers":["MetaCyc:TRANS-RXN-358","EC:7.6.2.3","GO:0071997"],"synonyms":[{"name":"ATP-dependent glutathione S-conjugate export pump","type":"exact"},{"name":"ATPase-coupled glutathione S-conjugate transmembrane transporter activity","type":"related"},{"name":"GS-X pump","type":"exact"},{"name":"MRP1/GS-X pump","type":"exact"},{"name":"conjugate transporter activity","type":"broad"},{"name":"glutathione S-conjugate-exporting ATPase activity","type":"narrow"},{"name":"glutathione S-conjugate-transporting ATPase activity","type":"related"}],"termid":"GO:0015431"}


id: PR:O14055
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tyrosine--tRNA ligase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine--tRNA ligase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.05c","secondary_identifiers":["UniProtKB:O14055"],"synonyms":[{"name":"Spom972h-YARS","type":"exact"},{"name":"TyrRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tyrosyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14055"}


id: PBO:0065036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELID1 pseudogene 1","termid":"PBO:0065036"}


id: GO:0002018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an increase in active angiotensin stimulates the adrenal cortices to secrete aldosterone.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process involved in regulation of systemic arterial blood pressure","termid":"GO:0003071"},{"relation_name":"is_a","term_name":"regulation of aldosterone secretion","termid":"GO:2000858"},{"relation_name":"part_of","term_name":"regulation of blood volume by renin-angiotensin","termid":"GO:0002016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"renin-angiotensin regulation of aldosterone production","synonyms":[{"name":"renin-angiotensin control of aldosterone production","type":"related"}],"termid":"GO:0002018"}


id: MONDO:1012891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hearing loss that occurs in sheep due to a mutation in the OTOF gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss disorder, non-human animal","termid":"MONDO:1012969"},{"relation_name":"is_a","term_name":"inherited auditory system disease, non-human animal","termid":"MONDO:1012970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness, OTOF-related, sheep","secondary_identifiers":["OMIA:002413-9940"],"termid":"MONDO:1012891","xrefs":{"Monarch":{"xref_id":"1012891"}}}


id: PBO:0074157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member F1","termid":"PBO:0074157"}


id: FYPO:0006196
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are shorter than normal and have abnormal orientation. The normal orientation is parallel to the long axis of the cell.","definition_xrefs":["PomBase:mah","PMID:11432827"],"direct_ancestors":[{"relation_name":"has_part","term_name":"misoriented interphase microtubules","termid":"FYPO:0003328"},{"relation_name":"has_part","term_name":"short interphase microtubules","termid":"FYPO:0006103"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002399","FYPO:0000054"],"is_obsolete":false,"name":"short misoriented interphase microtubules","synonyms":[{"name":"short misoriented cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"short misoriented interphase cytoplasmic microtubules","type":"exact"},{"name":"short misoriented interphase microtubules during mitotic cell cycle","type":"related"},{"name":"short misoriented interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0006196"}


id: PBO:0070567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 33","termid":"PBO:0070567"}


id: PBO:0036355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-body assembly protein","termid":"PBO:0036355"}


id: MONDO:0002655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A skin carcinoma that is characterized by infiltration of the skin by neoplastic large cells with abundant pale cytoplasm and large nuclei with prominent nucleoli.","definition_xrefs":["DOID:3450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin carcinoma","termid":"MONDO:0002656"},{"relation_name":"is_a","term_name":"Paget disease","termid":"MONDO:0021165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"cutaneous Paget disease","secondary_identifiers":["NCIT:C3302","MESH:D010145"],"synonyms":[{"name":"cutaneous Paget disease","type":"exact"},{"name":"cutaneous Paget's disease","type":"exact"},{"name":"extramammary Paget's disease","type":"exact"},{"name":"zone of skin Paget disease","type":"exact"}],"termid":"MONDO:0002655","xrefs":{"Monarch":{"xref_id":"0002655"}}}


id: MONDO:0035863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic multiple congenital anomalies/dysmorphic syndrome-intellectual disability (obsolete MONDO:0035863)","secondary_identifiers":["Orphanet:611327"],"termid":"MONDO:0035863","xrefs":{"Monarch":{"xref_id":"0035863"}}}


id: PBO:0085055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential protein of unknown function; likely exists as tetramer, may be regulated by the binding of small-molecule ligands (possibly sulfate ions), may have a role in yeast cell-wall biogenesis","termid":"PBO:0085055"}


id: PBO:0054829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2242","termid":"PBO:0054829"}


id: PR:Q9P7N4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tad3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7N4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-specific adenosine deaminase subunit tad3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.04c","synonyms":[{"name":"Spom972h-tad3","type":"exact"},{"name":"tRNA-specific adenosine-34 deaminase subunit tad3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7N4"}


id: GO:0039668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The uptake of a virus or viral genetic material into a host cell which occurs through retraction of the virion-bound pilus, followed by entry of the viral genome into the host cell through the pilus basal pore. Filamentous bacteriophages absorb to the tip of the F-pili and can enter the bacterial cell in this way.","definition_xrefs":["GOC:bf","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete viral entry into host cell via pilus basal pore (obsolete GO:0039668)","synonyms":[{"name":"filamentous viral entry into host cell via pilus retraction","type":"narrow"}],"termid":"GO:0039668"}


id: FYPO:0008395
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ferrous iron ions. Cells stop growing (and may die) at a concentration of iron ions that allows wild type cells to grow.","definition_xrefs":["PMID:35657410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to iron","termid":"FYPO:0005825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0002683","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to ferrous iron","termid":"FYPO:0008395"}


id: PR:O60060
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A carbamoyl-phosphate synthase small chain that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03990","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbamoyl-phosphate synthase arginine-specific small chain (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.09c","secondary_identifiers":["UniProtKB:O60060"],"synonyms":[{"name":"CPS-A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-carA","type":"exact"},{"name":"arginine-specific carbamoyl-phosphate synthetase, glutamine chain (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60060"}


id: GO:0009273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the peptidoglycan-based cell wall. An example of this process is found in Escherichia coli.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall biogenesis","termid":"GO:0042546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0044085"],"is_obsolete":false,"name":"peptidoglycan-based cell wall biogenesis","synonyms":[{"name":"cell envelope biosynthesis","type":"broad"},{"name":"cell envelope biosynthetic process","type":"broad"},{"name":"cell wall anabolism","type":"broad"},{"name":"cell wall assembly","type":"broad"},{"name":"cell wall biosynthetic process","type":"broad"},{"name":"cell wall formation","type":"broad"},{"name":"cell wall synthesis","type":"broad"}],"termid":"GO:0009273"}


id: PBO:0086440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative kinase with similarity to the PRK/URK/PANK kinase subfamily; the PRK/URK/PANK subfamily of P-loop kinases is also known as phosphoribulokinase/uridine kinase/bacterial pantothenate kinase","termid":"PBO:0086440"}


id: PBO:0085147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolin, nucleolar protein that binds nuclear localization sequences; required for pre-rRNA processing and ribosome biogenesis; binds to single stranded telomeric DNA and mRNA; binds to G-quadruplex DNA; methylated by Hmt1p; interaction with Top1p and nucleolar localization are negatively regulated by polyphosphorylation","termid":"PBO:0085147"}


id: GO:0019216
data:
  {"annotated_genes":["SJAG_01187","SJAG_02641","SJAG_02104","SJAG_01906","SJAG_01402","SJAG_04092","SJAG_00053","SJAG_04018","SJAG_02044","SJAG_02613","SJAG_03170","SJAG_03940","SJAG_03130","SJAG_01307","SJAG_02196","SJAG_02380"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78035,120087],"is_not":false,"summary":null,"term":"GO:0019216"},{"annotations":[59709,92282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902647"},{"annotations":[95766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[72604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045717"},{"annotations":[117484,113358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[114738,111706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071072"},{"annotations":[119543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902648"},{"annotations":[111827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"},{"annotations":[96981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045834"},{"annotations":[77263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"},{"annotations":[107790,90426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032443"},{"annotations":[76921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010510"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"lipid metabolic process","termid":"GO:0006629"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01187":null,"SJAG_01307":null,"SJAG_01402":null,"SJAG_01906":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_02196":null,"SJAG_02380":null,"SJAG_02613":null,"SJAG_02641":null,"SJAG_03130":null,"SJAG_03170":null,"SJAG_03940":null,"SJAG_04018":null,"SJAG_04092":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of lipid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-2426168","Reactome:R-HSA-400206"],"synonyms":[{"name":"regulation of lipid metabolism","type":"exact"}],"termid":"GO:0019216","terms_by_termid":{"GO:0010510":null,"GO:0010895":null,"GO:0019216":null,"GO:0032443":null,"GO:0045540":null,"GO:0045717":null,"GO:0045834":null,"GO:0070452":null,"GO:0071072":null,"GO:1902647":null,"GO:1902648":null,"GO:2001211":null}}


id: PBO:0113521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Unconventional prefoldin protein involved in translation initiation; required for correct assembly of RNAP I, II, and III in an Rpb5p-dependent manner; shuttles between nucleus and cytoplasm; mutants have inappropriate expression of nutrient sensitive genes due to translational derepression of Gcn4p transcription factor; diploid mutants show random budding; mutations affect TOR signaling; ortholog of human URI/RMP","termid":"PBO:0113521"}


id: FYPO:0005998
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any small nucleolar RNA (snoRNA) primary transcript, snoRNA precursor or processing intermediate, or mature snoRNA measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"altered snoRNA or precursor level","synonyms":[{"name":"abnormal snoRNA or precursor level","type":"exact"},{"name":"altered snoRNA or precursor accumulation","type":"related"},{"name":"altered snoRNA or precursor level during mitotic cell cycle","type":"related"},{"name":"altered snoRNA or precursor level during vegetative growth","type":"exact"},{"name":"altered snoRNA or precursor transcript level","type":"exact"}],"termid":"FYPO:0005998"}


id: PBO:0030661
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_Man8GlcNAc_level","termid":"PBO:0030661"}


id: PR:Q9USN6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC132.03 gene.","definition_xrefs":["UniProtKB:Q9USN6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C132.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC132.03","synonyms":[{"name":"Spom972h-SPCC132.03","type":"exact"}],"termid":"PR:Q9USN6"}


id: GO:0071732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitric oxide stimulus.","definition_xrefs":["GOC:mah","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitric oxide","termid":"GO:0071731"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"cellular response to reactive nitrogen species","termid":"GO:1902170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nitric oxide","termid":"GO:0071732"}


id: GO:0061451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the retrotrapezoid nucleus (RTN) over time from it's initial formation to its mature state. The retrotrapezoid nucleus is a group of neurons in the rostral medulla, which are responsible regulating respiration.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"medulla oblongata development","termid":"GO:0021550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retrotrapezoid nucleus development","termid":"GO:0061451"}


id: GO:0003032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an oxygen stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to oxygen levels","termid":"GO:0070482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of oxygen","termid":"GO:0003032"}


id: GO:0031903
data:
  {"annotated_genes":["SJAG_00891","SJAG_03464","SJAG_04763","SJAG_01165","SJAG_00947","SJAG_00702","SJAG_02997","SJAG_02619","SJAG_01685","SJAG_03324","SJAG_03715","SJAG_03440","SJAG_03781","SJAG_03493","SJAG_02693","SJAG_04428","SJAG_05950","SJAG_04315","SJAG_04146"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75470,75077,92298,77290,79909,120194,82141,98867,108645,59290,77646,117300,72435,117764,73499,79537,100484,81448,80276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005778"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a microbody.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microbody","termid":"GO:0042579"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"microbody","termid":"GO:0042579"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00702":null,"SJAG_00891":null,"SJAG_00947":null,"SJAG_01165":null,"SJAG_01685":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03464":null,"SJAG_03493":null,"SJAG_03715":null,"SJAG_03781":null,"SJAG_04146":null,"SJAG_04315":null,"SJAG_04428":null,"SJAG_04763":null,"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"microbody membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031903","terms_by_termid":{"GO:0005778":null}}


id: PBO:0080525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP family homolog 7, pseudogene","termid":"PBO:0080525"}


id: PBO:0001750
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homodimeric","termid":"PBO:0001750"}


id: PBO:0085404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein of unknown function; involved in the proteolytic activation of Rim101p in response to alkaline pH; interacts with Rim21p and Dfg16p to form a pH-sensing complex in the Rim101 pathway and is required to maintain Rim21p levels; has similarity to A. nidulans PalI;","termid":"PBO:0085404"}


id: PBO:0048411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA binding protein 1","termid":"PBO:0048411"}


id: PBO:0029336
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_phosphorylation","termid":"PBO:0029336"}


id: GO:0016946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Cleavage of substrates with Phe and Leu in P2.","definition_xrefs":["EC:3.4.22.41"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin F activity (obsolete GO:0016946)","synonyms":[{"name":"cathepsin F activity","type":"exact"}],"termid":"GO:0016946"}


id: FYPO:0005108
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of DNA strand elongation involved in mitotic nuclear DNA replication is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:1902319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal rate of mitotic DNA replication elongation","synonyms":[{"name":"normal rate of DNA replication elongation during mitotic cell cycle","type":"exact"},{"name":"normal rate of DNA strand elongation involved in mitotic DNA replication","type":"exact"},{"name":"normal rate of DNA strand elongation involved in nuclear cell cycle DNA replication","type":"exact"},{"name":"normal rate of mitotic DNA replication elongation during vegetative growth","type":"exact"}],"termid":"FYPO:0005108"}


id: GO:0050778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"positively_regulates","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of immune response","synonyms":[{"name":"stimulation of immune response","type":"narrow"},{"name":"up regulation of immune response","type":"exact"},{"name":"up-regulation of immune response","type":"exact"},{"name":"upregulation of immune response","type":"exact"}],"termid":"GO:0050778"}


id: FYPO:0007622
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of reactive oxygen species (ROS) measured in a cell is higher than normal when the cell is subject to oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"altered cellular reactive oxygen species level","termid":"FYPO:0002142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular reactive oxygen species level during cellular response to oxidative stress","synonyms":[{"name":"increased ROS accumulation during cellular response to oxidative stress","type":"related"},{"name":"increased cellular ROS accumulation during cellular response to oxidative stress","type":"related"},{"name":"increased cellular ROS level during cellular response to oxidative stress","type":"exact"},{"name":"increased cellular reactive oxygen species accumulation during cellular response to oxidative stress","type":"related"},{"name":"increased cellular reactive oxygen species level during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"increased cellular reactive oxygen species level during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"increased cellular reactive oxygen species level during oxidative stress response","type":"exact"}],"termid":"FYPO:0007622"}


id: PBO:0044122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 8","termid":"PBO:0044122"}


id: GO:0034392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of smooth muscle cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of muscle cell apoptotic process","termid":"GO:0010656"},{"relation_name":"is_a","term_name":"regulation of smooth muscle cell apoptotic process","termid":"GO:0034391"},{"relation_name":"negatively_regulates","term_name":"smooth muscle cell apoptotic process","termid":"GO:0034390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of smooth muscle cell apoptotic process","synonyms":[{"name":"down regulation of smooth muscle cell apoptosis","type":"exact"},{"name":"down-regulation of smooth muscle cell apoptosis","type":"exact"},{"name":"downregulation of smooth muscle cell apoptosis","type":"exact"},{"name":"inhibition of smooth muscle cell apoptosis","type":"narrow"},{"name":"negative regulation of SMC apoptosis","type":"exact"},{"name":"negative regulation of smooth muscle cell apoptosis","type":"narrow"}],"termid":"GO:0034392"}


id: PBO:0088800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain protein, involved in chromatin remodeling","termid":"PBO:0088800"}


id: PBO:0046331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENOX1 antisense RNA 1","termid":"PBO:0046331"}


id: FYPO:0007456
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 3' overhang single-stranded DNA endodeoxyribonuclease activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"increased 3' overhang single-stranded DNA endodeoxyribonuclease activity","termid":"FYPO:0007456"}


id: PBO:0069391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 651, pseudogene","termid":"PBO:0069391"}


id: GO:0035622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the intrahepatic bile ducts over time, from their formation to the mature structure. Intrahepatic bile ducts (bile ducts within the liver) collect bile from bile canaliculi in the liver, and connect to the extrahepatic bile ducts (bile ducts outside the liver).","definition_xrefs":["GOC:bf","PMID:20614624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"common bile duct development","termid":"GO:0061009"},{"relation_name":"part_of","term_name":"liver development","termid":"GO:0001889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intrahepatic bile duct development","synonyms":[{"name":"IHBD development","type":"exact"},{"name":"intrahepatic biliary duct development","type":"exact"}],"termid":"GO:0035622"}


id: MONDO:0011394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete keratosis pilaris atrophicans (obsolete MONDO:0011394)","termid":"MONDO:0011394","xrefs":{"Monarch":{"xref_id":"0011394"}}}


id: GO:0004867
data:
  {"annotated_genes":["SJAG_04398"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95067],"is_not":false,"summary":null,"term":"GO:0004867"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a serine-type endopeptidase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase inhibitor activity","termid":"GO:0004866"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04398":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0140678","GO:0030234","GO:0098772","GO:0003674","GO:0004857"],"is_obsolete":false,"name":"serine-type endopeptidase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-158795","Reactome:R-HSA-158800","Reactome:R-HSA-158893","Reactome:R-HSA-159005","Reactome:R-HSA-159001"],"synonyms":[{"name":"serine protease inhibitor activity","type":"narrow"},{"name":"serine proteinase inhibitor activity","type":"narrow"},{"name":"serpin activity","type":"narrow"}],"termid":"GO:0004867","terms_by_termid":{"GO:0004867":null}}


id: MONDO:0011782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Small breaks in the elastin-filled tissue of the retina.","definition_xrefs":["MESH:D000793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"angioid streaks","secondary_identifiers":["UMLS:C0002982","MedDRA:10066191","OMIM:607140","DOID:13401","MEDGEN:1541","EFO:1000805"],"synonyms":[{"name":"angioid streaks","type":"exact"}],"termid":"MONDO:0011782","xrefs":{"Monarch":{"xref_id":"0011782"}}}


id: GO:2001177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mediator complex assembly.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of mediator complex assembly","termid":"GO:2001176"},{"relation_name":"negatively_regulates","term_name":"mediator complex assembly","termid":"GO:0036034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"negative regulation of mediator complex assembly","termid":"GO:2001177"}


id: PBO:0045081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLGAP5 pseudogene 2","termid":"PBO:0045081"}


id: PBO:0070658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 29","termid":"PBO:0070658"}


id: GO:0046864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of isoprenoids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Isoprenoids comprise a group of compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"isoprenoid transport","termid":"GO:0046864"}


id: FYPO:0000082
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121345,121552],"is_not":false,"summary":null,"term":"FYPO:0000082"},{"annotations":[121338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001408"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the growth of a population of cells is decreased relative to normal in the vegetative growth phase of the life cycle at high temperatures.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02527":null,"SJAG_04464":null,"SJAG_04697":null},"genotype_count":3,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002058","FYPO:0001985","FYPO:0002060"],"is_obsolete":false,"name":"decreased cell population growth at high temperature","references_by_uniquename":{"PMID:28954740":null,"PMID:36058798":null,"PMID:37233261":null},"secondary_identifiers":["FYPO:0000247"],"single_locus_annotated_genes":["SJAG_04697","SJAG_04464","SJAG_02527"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","gms1delta"],"synonyms":[{"name":"decreased cell population growth at high temperature during mitotic cell cycle","type":"related"},{"name":"decreased growth at high temperature","type":"broad"},{"name":"decreased vegetative cell population growth at high temperature","type":"exact"},{"name":"growth defect, slow growth at high temperatures","type":"narrow"},{"name":"heat sensitive","type":"related"},{"name":"heat sensitivity: increased","type":"related"},{"name":"hypersensitive to high temperature","type":"related"},{"name":"reduced growth at high temperature","type":"exact"},{"name":"sensitive to heat","type":"related"},{"name":"sensitive to high temperature","type":"related"},{"name":"sensitive to high temperature during vegetative growth","type":"related"},{"name":"slow growth at high temperature","type":"narrow"},{"name":"temperature sensitive","type":"related"}],"termid":"FYPO:0000082","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000117":null,"FYECO:0000137":null,"FYPO:0000082":null,"FYPO:0001408":null,"FYPO_EXT:0000002":null}}


id: PBO:0055530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2965","termid":"PBO:0055530"}


id: GO:0019558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-histidine into other compounds, including 2-oxoglutarate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate metabolic process","termid":"GO:0006103"},{"relation_name":"is_a","term_name":"L-histidine catabolic process","termid":"GO:0006548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-histidine catabolic process to 2-oxoglutarate","synonyms":[{"name":"histidine breakdown to 2-oxoglutarate","type":"exact"},{"name":"histidine catabolic process to 2-ketoglutarate","type":"exact"},{"name":"histidine catabolic process to 2-oxoglutarate","type":"broad"},{"name":"histidine catabolic process to alpha-ketoglutarate","type":"exact"},{"name":"histidine catabolic process to alpha-oxoglutarate","type":"exact"},{"name":"histidine catabolism to 2-ketoglutarate","type":"exact"},{"name":"histidine catabolism to alpha-ketoglutarate","type":"exact"},{"name":"histidine catabolism to alpha-oxoglutarate","type":"exact"},{"name":"histidine degradation to 2-oxoglutarate","type":"exact"}],"termid":"GO:0019558"}


id: GO:0044353
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded, uncoated intracellular vesicle formed by the process of micropinocytosis.","definition_xrefs":["PMID:14732047","PMID:14731589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pinosome","termid":"GO:0044352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005768","GO:0031410"],"is_obsolete":false,"name":"micropinosome","termid":"GO:0044353"}


id: MONDO:0859281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with autism and dysmorphic facies","secondary_identifiers":["UMLS:C5774206","MEDGEN:1823979","OMIM:620021"],"termid":"MONDO:0859281","xrefs":{"Monarch":{"xref_id":"0859281"}}}


id: GO:1990822
data:
  {"annotated_genes":["SJAG_04715","SJAG_04725","SJAG_02716","SJAG_03400","SJAG_01336","SJAG_00877","SJAG_04983","SJAG_01636","SJAG_00051","SJAG_03256","SJAG_01923","SJAG_02029"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99250,105955,105956,105957,105958],"is_not":false,"summary":null,"term":"GO:1990822"},{"annotations":[92266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034488"},{"annotations":[96487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034490"},{"annotations":[105763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[64321,100738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903826"},{"annotations":[99265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[105766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[112003,105767,104736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"}]},"cv_name":"biological_process","definition":"The directed movement of basic amino acids from one side of a membrane to the other.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"basic amino acid transport","termid":"GO:0015802"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00051":null,"SJAG_00877":null,"SJAG_01336":null,"SJAG_01636":null,"SJAG_01923":null,"SJAG_02029":null,"SJAG_02716":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_04715":null,"SJAG_04725":null,"SJAG_04983":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"basic amino acid transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:1990822","terms_by_termid":{"GO:0034488":null,"GO:0034490":null,"GO:0089708":null,"GO:0090513":null,"GO:0090517":null,"GO:0090518":null,"GO:1903826":null,"GO:1990822":null}}


id: PBO:0043803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexin 3","termid":"PBO:0043803"}


id: PBO:0030633
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_7-methylguanosine_cap_hypermethylation","termid":"PBO:0030633"}


id: PBO:0091876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular acid phosphatase Pho1","termid":"PBO:0091876"}


id: PBO:0076264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"switching B cell complex subunit SWAP70","termid":"PBO:0076264"}


id: PBO:0075671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase long chain base subunit 2","termid":"PBO:0075671"}


id: PBO:0071871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 9","termid":"PBO:0071871"}


id: PBO:0047980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1 family member G, pseudogene","termid":"PBO:0047980"}


id: PR:O74834
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A uracil-DNA glycosylase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11264:SF0","PRO:DNx","OMA:SCHPO04380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil-DNA glycosylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.06","secondary_identifiers":["UniProtKB:O74834"],"synonyms":[{"name":"Spom972h-UNG","type":"exact"},{"name":"UDG (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74834"}


id: GO:0032373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of sterols into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"regulation of sterol transport","termid":"GO:0032371"},{"relation_name":"positively_regulates","term_name":"sterol transport","termid":"GO:0015918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sterol transport","synonyms":[{"name":"activation of sterol transport","type":"narrow"},{"name":"stimulation of sterol transport","type":"narrow"},{"name":"up regulation of sterol transport","type":"exact"},{"name":"up-regulation of sterol transport","type":"exact"},{"name":"upregulation of sterol transport","type":"exact"}],"termid":"GO:0032373"}


id: FYECO:0000010
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The experimental conditions included the absence of a chemical.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000010 absence of chemical (obsolete FYECO:0000010)","termid":"FYECO:0000010"}


id: PBO:0073888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 12 member 5","termid":"PBO:0073888"}


id: PBO:0082340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent 5' to 3' RNA/DNA and DNA helicase; subunit of the exosome-associated Nrd1p complex that mediates 3' end formation of snRNAs, snoRNAs, CUTs and some mRNAs; helicase-independent role in transcription-coupled repair; coordinates replication with transcription, associating with moving forks and preventing errors that occur when forks encounter transcribed regions; homolog of Senataxin, implicated in Ataxia-Oculomotor Apraxia 2 and a dominant form of juvenile ALS","termid":"PBO:0082340"}


id: PBO:0056346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase kinase 4","termid":"PBO:0056346"}


id: GO:0016029
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded compartment that is found at the base of the rhabdomere and contains stored calcium, InsP3 receptors and smooth endoplasmic reticulum Ca2+-ATPase.","definition_xrefs":["PMID:8646774","PMID:11707492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum subcompartment","termid":"GO:0098827"},{"relation_name":"is_a","term_name":"smooth endoplasmic reticulum cisterna","termid":"GO:0120082"},{"relation_name":"part_of","term_name":"rhabdomere","termid":"GO:0016028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005783","GO:0005737"],"is_obsolete":false,"name":"subrhabdomeral cisterna","synonyms":[{"name":"SMC","type":"related"},{"name":"submicrovillar cisterna","type":"exact"}],"termid":"GO:0016029"}


id: MONDO:0011698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glycine N-methyltransferase deficiency (GNMT deficiency) is a very rare condition characterized by persistent and isolated excess levels of methionine in the blood (hypermethioninemia). The only clinical abnormalities are mild increase of the liver size (hepatomegaly) and chronic elevation of the transaminase levels in the blood without liver disease. Methionine may also be increased in urine. However, because elevated levels of methionine in the blood itself is a risk factor for development of neurological signs and symptoms, people with GNMT deficiency can have neurological problems when methionine levelsare greater than 800μmol/L. GNMT deficiency is caused by mutations in the GNMT gene. Inheritance is autosomal recessive. Treatment is not needed in most cases.","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of methionine catabolism","termid":"MONDO:0000351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"glycine N-methyltransferase deficiency","secondary_identifiers":["UMLS:C1847720","SCTID:763720007","Orphanet:289891","icd11.foundation:16192453","DOID:0111037","MEDGEN:338300","GARD:10764","OMIM:606664"],"synonyms":[{"name":"GNMT deficiency","type":"exact"},{"name":"Glycine N-methyltransferase deficiency","type":"exact"},{"name":"glycine N-methyltransferase deficiency","type":"exact"},{"name":"hypermethioninemia due to GNMT deficiency","type":"exact"},{"name":"hypermethioninemia due to glycine N-methyltransferase deficiency","type":"exact"}],"termid":"MONDO:0011698","xrefs":{"Monarch":{"xref_id":"0011698"}}}


id: PR:Q9P6Q2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An enolase-phosphatase E1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01125","PANTHER:PTHR20371:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase-phosphatase E1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.08","secondary_identifiers":["UniProtKB:Q9P6Q2"],"synonyms":[{"name":"2,3-diketo-5-methylthio-1-phosphopentane phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ENOPH1","type":"exact"}],"termid":"PR:Q9P6Q2"}


id: PBO:0063948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 inhibitor and LY6/PLAUR domain containing","termid":"PBO:0063948"}


id: MOD:00064
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-acetyl-L-lysine.","definition_xrefs":["DeltaMass:214","OMSSA:24","ChEBI:17752","PubMed:11999733","PubMed:15350136","Unimod:1#K","PubMed:12175151","RESID:AA0055","PubMed:1680872","PubMed:11857757","PubMed:670159","PubMed:11369851","PubMed:14730666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylated L-lysine","termid":"MOD:00723"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"},{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:01875","MOD:00408"],"is_obsolete":false,"name":"N6-acetyl-L-lysine","synonyms":[{"name":"(2S)-6-acetamido-2-aminohexanoic acid","type":"exact"},{"name":"6-acetylamino-2-aminohexanoic acid","type":"exact"},{"name":"6-acetylazanyl-2-aminohexanoic acid","type":"exact"},{"name":"Acetyl","type":"related"},{"name":"Acetylation","type":"related"},{"name":"MOD_RES N6-acetyllysine","type":"exact"},{"name":"N(zeta)-acetyllysine","type":"exact"},{"name":"N6-acetyl-L-lysine","type":"exact"},{"name":"N6-acetylated L-lysine","type":"exact"},{"name":"N6AcLys","type":"exact"},{"name":"acetylk","type":"exact"},{"name":"epsilon-acetyllysine","type":"exact"}],"termid":"MOD:00064"}


id: GO:0032391
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the photoreceptor cell cilium linking the photoreceptor inner and outer segments. It's considered to be equivalent to the ciliary transition zone.","definition_xrefs":["PMID:8718680","GOC:cilia","PMID:15917207","PMID:22653444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary transition zone","termid":"GO:0035869"},{"relation_name":"part_of","term_name":"photoreceptor cell cilium","termid":"GO:0097733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"photoreceptor connecting cilium","synonyms":[{"name":"photoreceptor cilium","type":"related"}],"termid":"GO:0032391"}


id: PR:Q9UUH1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A leptin receptor overlapping transcript-like 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 55 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.11","secondary_identifiers":["UniProtKB:Q9UUH1"],"synonyms":[{"name":"Spom972h-LEPROTL1","type":"exact"}],"termid":"PR:Q9UUH1"}


id: PBO:0064650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPFIA1 pseudogene 1","termid":"PBO:0064650"}


id: PBO:0035701
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_during_vegetative_growth","termid":"PBO:0035701"}


id: MONDO:0041008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete contact dermatitis caused by poison oak (obsolete MONDO:0041008)","secondary_identifiers":["SCTID:200824008"],"synonyms":[{"name":"contact dermatitis caused by poison oak","type":"exact"},{"name":"contact dermatitis due to poison oak","type":"exact"}],"termid":"MONDO:0041008","xrefs":{"Monarch":{"xref_id":"0041008"}}}


id: PBO:0060323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYO1B antisense RNA 1","termid":"PBO:0060323"}


id: MONDO:0700099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma, non-human animal","termid":"MONDO:0700101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenocarcinoma, non-human animal","termid":"MONDO:0700099","xrefs":{"Monarch":{"xref_id":"0700099"}}}


id: MONDO:0010454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 88","secondary_identifiers":["DOID:0112053","GARD:22692","MEDGEN:477075","UMLS:C3275444","OMIM:300852"],"synonyms":[{"name":"MRX88","type":"exact"},{"name":"intellectual disability, X-linked 88","type":"exact"},{"name":"intellectual disability, XMEN-linked 88","type":"exact"},{"name":"mental retardation, X-linked 88","type":"exact"}],"termid":"MONDO:0010454","xrefs":{"Monarch":{"xref_id":"0010454"}}}


id: PBO:0047888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(6)(p25.1)","termid":"PBO:0047888"}


id: GO:1905748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which a hard palate is generated and organized.","definition_xrefs":["GO_REF:0000083","PMID:23419067","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hard palate morphogenesis","synonyms":[{"name":"palatum durum morphogenesis","type":"exact"}],"termid":"GO:1905748"}


id: GO:0046995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen reduces a known acceptor other than a cytochrome, an iron-sulfur protein, NAD, NADP, or a quinone or similar compound.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor","termid":"GO:0016695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on hydrogen as donor, with other known acceptors","secondary_identifiers":["EC:1.12.98.-"],"termid":"GO:0046995"}


id: PBO:0070181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 96 pseudogene","termid":"PBO:0070181"}


id: GO:0047712
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Cypridina luciferin + O2 = oxidized Cypridina luciferin + CO2 + light.","definition_xrefs":["EC:1.13.12.6","MetaCyc:CYPRIDINA-LUCIFERIN-2-MONOOXYGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"},{"relation_name":"is_a","term_name":"luciferin monooxygenase activity","termid":"GO:0045289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"Cypridina-luciferin 2-monooxygenase activity","secondary_identifiers":["RHEA:22760"],"synonyms":[{"name":"Cypridina luciferase activity","type":"related"},{"name":"Cypridina-luciferin:oxygen 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"Cypridina-type luciferase activity","type":"related"},{"name":"luciferase (Cypridina luciferin)","type":"related"},{"name":"luciferase activity","type":"broad"}],"termid":"GO:0047712"}


id: FYPO:0001142
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of Man8GlcNAc2 measured in a cell is normal (i.e. indistinguishable from wild type). Man8GlcNAc2 is any N-glycan that consists of a branched ten-membered mannooligosaccharide containing eight D-mannosyl residues and two N-acetylglucosamine residues.","definition_xrefs":["CHEBI:64048","PomBase:mah","PMID:12686557","CHEBI:64052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal polysaccharide level","termid":"FYPO:0001077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal Man8GlcNAc level","synonyms":[{"name":"normal Man8GlcNAc accumulation","type":"related"},{"name":"normal Man8GlcNAc level during mitotic cell cycle","type":"related"},{"name":"normal Man8GlcNAc level during vegetative growth","type":"exact"},{"name":"normal Man8GlcNAc2 level","type":"exact"},{"name":"normal cellular Man8GlcNAc level","type":"exact"}],"termid":"FYPO:0001142"}


id: PBO:0070953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 8","termid":"PBO:0070953"}


id: MONDO:0021523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the pharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"},{"relation_name":"is_a","term_name":"pharynx neoplasm","termid":"MONDO:0021246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of pharynx","secondary_identifiers":["ICD9:210.9","UMLS:C0153940","MEDGEN:102296","NCIT:C3597","SCTID:92293007"],"synonyms":[{"name":"benign neoplasm of the pharynx","type":"exact"},{"name":"benign pharyngeal neoplasm","type":"exact"},{"name":"benign pharyngeal tumor","type":"exact"},{"name":"benign pharyngeal tumour","type":"exact"},{"name":"benign pharynx neoplasm","type":"exact"},{"name":"benign pharynx tumor","type":"exact"},{"name":"benign pharynx tumour","type":"exact"},{"name":"benign tumor of pharynx","type":"exact"},{"name":"benign tumor of the pharynx","type":"exact"},{"name":"benign tumour of pharynx","type":"exact"},{"name":"benign tumour of the pharynx","type":"exact"},{"name":"pharyngeal neoplasm benign","type":"exact"},{"name":"pharynx benign neoplasm","type":"exact"}],"termid":"MONDO:0021523","xrefs":{"Monarch":{"xref_id":"0021523"}}}


id: GO:0060990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of macromolecules to form a macromolecular complex that contains a tube of lipid surrounded by a protein coat involved in membrane shaping of vesicle membranes as organelles undergo fission.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid tube assembly","termid":"GO:0060988"},{"relation_name":"part_of","term_name":"organelle fission","termid":"GO:0048285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"lipid tube assembly involved in organelle fission","synonyms":[{"name":"lipid tubulation involved in organelle fission","type":"exact"}],"termid":"GO:0060990"}


id: PBO:0001206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain","termid":"PBO:0001206"}


id: PBO:0077170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tousled like kinase 2 pseudogene 1","termid":"PBO:0077170"}


id: GO:0097017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A renal system process in which proteins are taken up from the collecting ducts, glomerulus and proximal and distal loops of the nephron. In non-mammalian species, absorption may occur in related structures (e.g. protein absorption is observed in nephrocytes in Drosophila, see PMID:23264686).","definition_xrefs":["GOC:yaf","PMID:18431508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal absorption","termid":"GO:0070293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal protein absorption","termid":"GO:0097017"}


id: PBO:0052142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily H member 8","termid":"PBO:0052142"}


id: PATO:0000857
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000857 lordosis reflex value (obsolete PATO:0000857)","termid":"PATO:0000857"}


id: MONDO:0010912
data:
  {"annotated_genes":["SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88604],"is_not":false,"summary":null,"term":"MONDO:0010912"}]},"cv_name":"mondo","definition":"Any congenital fibrosis of extraocular muscles in which the cause of the disease is a mutation in the TUBB3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital fibrosis of extraocular muscles","termid":"MONDO:0007614"},{"relation_name":"is_a","term_name":"TUBB3-related tubulinopathy","termid":"MONDO:0100154"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"fibrosis of extraocular muscles, congenital, 3A, with or without extraocular involvement","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:600638","DOID:0081017","GARD:15321","MEDGEN:412638","MESH:C567572","UMLS:C2748801"],"synonyms":[{"name":"CFEOM3A","type":"related"},{"name":"Feom3 locus","type":"related"},{"name":"TUBB3 congenital fibrosis of extraocular muscles","type":"exact"},{"name":"congenital fibrosis of extraocular muscles caused by mutation in TUBB3","type":"exact"},{"name":"fibrosis of extraocular muscles, congenital, 3A","type":"exact"},{"name":"fibrosis of extraocular muscles, congenital, 3A, with or without extraocular involvement","type":"exact"}],"termid":"MONDO:0010912","terms_by_termid":{"MONDO:0010912":null},"xrefs":{"Monarch":{"xref_id":"0010912"}}}


id: PBO:0081300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 81","termid":"PBO:0081300"}


id: GO:0051247
data:
  {"annotated_genes":["SJAG_02043","SJAG_02723","SJAG_01544","SJAG_00712","SJAG_02189","SJAG_01249","SJAG_02812","SJAG_01131","SJAG_01436","SJAG_03048","SJAG_00071","SJAG_00642","SJAG_01489","SJAG_01517","SJAG_01210","SJAG_04990","SJAG_05265","SJAG_03550","SJAG_00766","SJAG_04477","SJAG_01047","SJAG_03699"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[71533,119141,108611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000767"},{"annotations":[114665,100619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070131"},{"annotations":[102384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"},{"annotations":[68852,68345,62199,66674,69836,70350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901800"},{"annotations":[108614,113699,104316,119083,110866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"},{"annotations":[101309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904352"},{"annotations":[70304,67825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045901"},{"annotations":[74492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045948"},{"annotations":[78308,70305,67826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045905"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"positively_regulates","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00642":null,"SJAG_00712":null,"SJAG_00766":null,"SJAG_01047":null,"SJAG_01131":null,"SJAG_01210":null,"SJAG_01249":null,"SJAG_01436":null,"SJAG_01489":null,"SJAG_01517":null,"SJAG_01544":null,"SJAG_02043":null,"SJAG_02189":null,"SJAG_02723":null,"SJAG_02812":null,"SJAG_03048":null,"SJAG_03550":null,"SJAG_03699":null,"SJAG_04477":null,"SJAG_04990":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0032270"],"synonyms":[{"name":"activation of cellular protein metabolic process","type":"narrow"},{"name":"activation of protein metabolic process","type":"narrow"},{"name":"positive regulation of cellular protein metabolic process","type":"exact"},{"name":"positive regulation of cellular protein metabolism","type":"exact"},{"name":"positive regulation of protein metabolism","type":"exact"},{"name":"stimulation of cellular protein metabolic process","type":"narrow"},{"name":"stimulation of protein metabolic process","type":"narrow"},{"name":"up regulation of cellular protein metabolic process","type":"exact"},{"name":"up regulation of protein metabolic process","type":"exact"},{"name":"up-regulation of cellular protein metabolic process","type":"exact"},{"name":"up-regulation of protein metabolic process","type":"exact"},{"name":"upregulation of cellular protein metabolic process","type":"exact"},{"name":"upregulation of protein metabolic process","type":"exact"}],"termid":"GO:0051247","terms_by_termid":{"GO:0032436":null,"GO:0045901":null,"GO:0045905":null,"GO:0045948":null,"GO:0070131":null,"GO:0070134":null,"GO:1901800":null,"GO:1904352":null,"GO:1905786":null,"GO:2000767":null}}


id: FYPO:0004137
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 in heterochromatin at subtelomeric regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:25245948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0005447","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at subtelomeres during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 dimethylation at telomeric heterochromatin during vegetative growth","type":"related"},{"name":"decreased histone H3K9me2 at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 dimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0004137"}


id: MONDO:0020135
data:
  {"annotated_genes":["SJAG_00754","SJAG_00639","SJAG_04907","SJAG_00653","SJAG_01970","SJAG_04321","SJAG_04824","SJAG_04067","SJAG_00900","SJAG_04084","SJAG_03601","SJAG_01791","SJAG_04902","SJAG_01260","SJAG_03328","SJAG_04123","SJAG_01645","SJAG_01818","SJAG_05277"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014349"},{"annotations":[88140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013853"},{"annotations":[88438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010190"},{"annotations":[88927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012890"},{"annotations":[88931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012891"},{"annotations":[88261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014370"},{"annotations":[87374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009166"},{"annotations":[87150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012438"},{"annotations":[87139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012683"},{"annotations":[88890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013990"},{"annotations":[88231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014351"},{"annotations":[88086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032643"},{"annotations":[88790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032831"},{"annotations":[88340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030258"},{"annotations":[88341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030259"},{"annotations":[88054,88053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030438"},{"annotations":[88746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014485"},{"annotations":[88224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054844"},{"annotations":[88342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030261"},{"annotations":[87922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014874"}]},"cv_name":"mondo","definition":"Pontocerebellar hypoplasias (PCH) are a rare heterogeneous group of diseases characterized by hypoplasia and atrophy and/or early neurodegeneration of the cerebellum and pons. Eight subtypes named type 1-8 have been described, generally inherited in an autosomal recessive pattern.","definition_xrefs":["Orphanet:98523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00639":null,"SJAG_00653":null,"SJAG_00754":null,"SJAG_00900":null,"SJAG_01260":null,"SJAG_01645":null,"SJAG_01791":null,"SJAG_01818":null,"SJAG_01970":null,"SJAG_03328":null,"SJAG_03601":null,"SJAG_04067":null,"SJAG_04084":null,"SJAG_04123":null,"SJAG_04321":null,"SJAG_04824":null,"SJAG_04902":null,"SJAG_04907":null,"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060264","NORD:1596","UMLS:C1261175","GARD:10977","SCTID:45163000","MESH:C580383","MEDGEN:224703","OMIMPS:607596","icd11.foundation:1565266279"],"synonyms":[{"name":"PCH","type":"exact"},{"name":"isolated pontocerebellar hypoplasia","type":"narrow"},{"name":"nonsyndromic pontocerebellar hypoplasia","type":"narrow"},{"name":"pontocerebellar hypoplasia","type":"exact"},{"name":"pontoneocerebellar atrophy","type":"exact"},{"name":"pontoneocerebllar hypoplasia","type":"exact"}],"termid":"MONDO:0020135","terms_by_termid":{"MONDO:0009166":null,"MONDO:0010190":null,"MONDO:0012438":null,"MONDO:0012683":null,"MONDO:0012890":null,"MONDO:0012891":null,"MONDO:0013853":null,"MONDO:0013990":null,"MONDO:0014349":null,"MONDO:0014351":null,"MONDO:0014370":null,"MONDO:0014485":null,"MONDO:0014874":null,"MONDO:0030258":null,"MONDO:0030259":null,"MONDO:0030261":null,"MONDO:0030438":null,"MONDO:0032643":null,"MONDO:0032831":null,"MONDO:0054844":null},"xrefs":{"Monarch":{"xref_id":"0020135"}}}


id: MONDO:0014793
data:
  {"annotated_genes":["SJAG_03018"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87612],"is_not":false,"summary":null,"term":"MONDO:0014793"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"is_a","term_name":"sterol biosynthesis disorder","termid":"MONDO:0019240"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"microcephaly-congenital cataract-psoriasiform dermatitis syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17886","MEDGEN:1798933","OMIM:616834","Orphanet:488168","UMLS:C5567510"],"synonyms":[{"name":"MCCPD","type":"exact"},{"name":"Sc4Mol deficiency","type":"related"},{"name":"microcephaly, congenital cataract, and psoriasiform dermatitis","type":"exact"},{"name":"smo deficiency","type":"exact"},{"name":"sterol-C4-methyl oxidase deficiency","type":"exact"}],"termid":"MONDO:0014793","terms_by_termid":{"MONDO:0014793":null},"xrefs":{"Monarch":{"xref_id":"0014793"}}}


id: PBO:0114849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and nucleatr DNA polymerase zeta subunit Rev7","termid":"PBO:0114849"}


id: PBO:0085640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in karyogamy and spindle pole body duplication; involved in karyogamy during mating; involved in centrosome separation and duplication during mitosis; localizes to the half-bridge of the spindle pole body; interacts with Spc72p during karyogamy; also interacts with Cdc31p; essential gene","termid":"PBO:0085640"}


id: MONDO:0958011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 117","secondary_identifiers":["MEDGEN:1848763","UMLS:C5882739","OMIM:620668"],"termid":"MONDO:0958011","xrefs":{"Monarch":{"xref_id":"0958011"}}}


id: PBO:0018055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-specific gamma-glutamylcyclotransferase Ggg1 (predicted)","termid":"PBO:0018055"}


id: FYPO:0004321
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of DNA measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"},{"relation_name":"is_a","term_name":"altered DNA level","termid":"FYPO:0004320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"altered DNA level during vegetative growth","synonyms":[{"name":"abnormal DNA content during vegetative growth","type":"exact"},{"name":"abnormal DNA level during vegetative growth","type":"exact"},{"name":"altered DNA content during vegetative growth","type":"exact"},{"name":"altered DNA level during mitotic cell cycle","type":"related"},{"name":"altered cellular DNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0004321"}


id: MONDO:0970943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure, X-linked, 8","secondary_identifiers":["OMIM:301119","UMLS:C5935568","DOID:0070599","MEDGEN:1858665"],"termid":"MONDO:0970943","xrefs":{"Monarch":{"xref_id":"0970943"}}}


id: MONDO:0060582
data:
  {"annotated_genes":["SJAG_01063"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87045],"is_not":false,"summary":null,"term":"MONDO:0060582"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"mitochondrial disease","termid":"MONDO:0044970"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"auditory neuropathy-optic atrophy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4521678","MEDGEN:1623572","Orphanet:542585","GARD:17983","OMIM:617717"],"synonyms":[{"name":"ANOA","type":"related"},{"name":"auditory neuropathy and optic atrophy","type":"related"}],"termid":"MONDO:0060582","terms_by_termid":{"MONDO:0060582":null},"xrefs":{"Monarch":{"xref_id":"0060582"}}}


id: MONDO:0032567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated congenital growth hormone deficiency","termid":"MONDO:0000050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"isolated growth hormone deficiency, type 4","secondary_identifiers":["OMIM:618157","UMLS:C4722273","MEDGEN:1648300"],"synonyms":[{"name":"Dwarfism of Sindh","type":"related"},{"name":"IGHD4","type":"related"},{"name":"ISOLATED GROWTH HORMONE DEFICIENCY, TYPE IV","type":"related"},{"name":"Isolated Growth Hormone Deficiency, Type Ib","type":"related"},{"name":"Isolated Growth Hormone Deficiency, Type Ib, Formerly","type":"related"},{"name":"growth hormone deficiency, isolated, type IV","type":"exact"}],"termid":"MONDO:0032567","xrefs":{"Monarch":{"xref_id":"0032567"}}}


id: GO:0097031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The biogenesis of a mitochondrial respiratory chain complex I, a protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Includes the synthesis of constituent proteins and their aggregation, arrangement and bonding together.","definition_xrefs":["GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respiratory chain complex I biogenesis (obsolete GO:0097031)","termid":"GO:0097031"}


id: GO:0033015
data:
  {"annotated_genes":["SJAG_00366"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042167"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the breakdown of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00366":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"tetrapyrrole catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tetrapyrrole breakdown","type":"exact"},{"name":"tetrapyrrole catabolism","type":"exact"},{"name":"tetrapyrrole degradation","type":"exact"}],"termid":"GO:0033015","terms_by_termid":{"GO:0042167":null}}


id: PBO:0079711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 4 pseudogene 1","termid":"PBO:0079711"}


id: PR:000029043
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe 972h- protein","synonyms":[{"name":"Spom972h- protein","type":"exact"}],"termid":"PR:000029043"}


id: MONDO:0008064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal bones, absence of","secondary_identifiers":["OMIM:161480","MESH:C562753","MEDGEN:90946","UMLS:C0339851"],"synonyms":[{"name":"nasal bones, absence of","type":"exact"}],"termid":"MONDO:0008064","xrefs":{"Monarch":{"xref_id":"0008064"}}}


id: PBO:0011964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simialr to S. pombe SPAC186.09","termid":"PBO:0011964"}


id: GO:0009008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to a DNA molecule.","definition_xrefs":["PMID:7862522","GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140097","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"DNA-methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-5227490"],"synonyms":[{"name":"DNA methylase","type":"broad"},{"name":"DNA methyltransferase activity","type":"exact"},{"name":"DNA transmethylase activity","type":"exact"},{"name":"Type II DNA methylase","type":"related"},{"name":"deoxyribonucleate methylase activity","type":"exact"},{"name":"deoxyribonucleate methyltransferase activity","type":"exact"},{"name":"deoxyribonucleic acid methylase activity","type":"exact"},{"name":"deoxyribonucleic acid methyltransferase activity","type":"exact"},{"name":"deoxyribonucleic acid modification methylase activity","type":"related"}],"termid":"GO:0009008"}


id: MONDO:0015821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mycosis fungoides (MF) and its variants represent the most common forms of cutaneous T-cell lymphomas. The term MF is restricted to the classical form characterized by the slow progression of patches, plaques and tumors, and to variants with a similar indolent course.","definition_xrefs":["Orphanet:178566"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indolent primary cutaneous T-cell lymphoma","termid":"MONDO:0015816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093","MONDO:0005570"],"is_obsolete":false,"name":"mycosis fungoides and variants","secondary_identifiers":["icd11.foundation:2036068731","GARD:20166"],"termid":"MONDO:0015821","xrefs":{"Monarch":{"xref_id":"0015821"}}}


id: PBO:0044989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 40 pseudogene 1","termid":"PBO:0044989"}


id: GO:0043001
data:
  {"annotated_genes":["SJAG_00330","SJAG_00144","SJAG_03970","SJAG_04609","SJAG_00858","SJAG_03838","SJAG_01516","SJAG_01114","SJAG_00916"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71942,79367,97051,108371,108999,110767,111556,114997],"is_not":false,"summary":null,"term":"GO:0043001"},{"annotations":[89946],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0042997"}]},"cv_name":"biological_process","definition":"The directed movement of proteins from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi to plasma membrane transport","termid":"GO:0006893"},{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"establishment of protein localization to plasma membrane","termid":"GO:0061951"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00144":null,"SJAG_00330":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01114":null,"SJAG_01516":null,"SJAG_03838":null,"SJAG_03970":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"Golgi to plasma membrane protein transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043001","terms_by_termid":{"GO:0042997":null,"GO:0043001":null}}


id: PBO:0113469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC1-stimulating GTPase and EGO/GSE complex; subunit of Gtr1-Gtr2 GTPase that activates TORC1 in response to amino acid stimulation; subunit of EGO/GSE vacuolar membrane complex that regulates exit from rapamycin-induced growth arrest and sorting of Gap1p; involved in phosphate transport, telomeric chromatin silencing and oxidative stress response; activated by Iml1p (GAP) subunit of SEACIT complex; targeted to vacuole via AP-3 pathway; similar to human RagA and RagB","termid":"PBO:0113469"}


id: PBO:0075144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C","termid":"PBO:0075144"}


id: PBO:0058740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6864","termid":"PBO:0058740"}


id: PBO:0059933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 19","termid":"PBO:0059933"}


id: PBO:0070242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 182 pseudogene","termid":"PBO:0070242"}


id: GO:0019857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving 5-methylcytosine, a methylated base of DNA.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-methylcytosine metabolic process (obsolete GO:0019857)","synonyms":[{"name":"5-methylcytosine metabolism","type":"exact"}],"termid":"GO:0019857"}


id: GO:2000981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of inner ear receptor cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mechanoreceptor differentiation","termid":"GO:0045632"},{"relation_name":"is_a","term_name":"regulation of inner ear receptor cell differentiation","termid":"GO:2000980"},{"relation_name":"negatively_regulates","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of inner ear receptor cell differentiation","synonyms":[{"name":"negative regulation of inner ear hair cell differentiation","type":"exact"}],"termid":"GO:2000981"}


id: MONDO:0020427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Laubry-Pezzi syndrome is a rare, non-syndromic, congenital heart malformation characterized by the prolapse of an aortic valve cusp into a subjacent ventricular septal defect due to Venturi effect, resulting in aortic regurgitation. Patients typically present with symptoms of progressive aortic valve insufficiency, such as shortness of breath, heart palpitations, chest pain and exercise intolerance.","definition_xrefs":["Orphanet:99094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Laubry-Pezzi syndrome","secondary_identifiers":["GARD:19646","MEDGEN:1643612","SCTID:764955006","UMLS:C4707235"],"synonyms":[{"name":"VSD with aortic insufficiency","type":"exact"},{"name":"ventricular septal defect with aortic insufficiency","type":"exact"}],"termid":"MONDO:0020427","xrefs":{"Monarch":{"xref_id":"0020427"}}}


id: PBO:0031772
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_fermentation","termid":"PBO:0031772"}


id: PBO:0041992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 38","termid":"PBO:0041992"}


id: PBO:0001513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle checkpoint protein Dma1","termid":"PBO:0001513"}


id: GO:0002903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell apoptotic process","termid":"GO:0002902"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte apoptotic process","termid":"GO:0070229"},{"relation_name":"negatively_regulates","term_name":"B cell apoptotic process","termid":"GO:0001783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell apoptotic process","synonyms":[{"name":"down regulation of B cell apoptosis","type":"exact"},{"name":"down-regulation of B cell apoptosis","type":"exact"},{"name":"downregulation of B cell apoptosis","type":"exact"},{"name":"inhibition of B cell apoptosis","type":"narrow"},{"name":"negative regulation of B cell apoptosis","type":"narrow"}],"termid":"GO:0002903"}


id: MONDO:0100446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinopathy caused by biallelic variants in the CNGB3 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular channelopathy","termid":"MONDO:0019119"},{"relation_name":"is_a","term_name":"hereditary neuromuscular disease","termid":"MONDO:0100546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNGB3-related retinopathy","synonyms":[{"name":"ACHM1","type":"narrow"},{"name":"ACHM1 (formerly)","type":"narrow"},{"name":"ACHM1, formerly","type":"narrow"},{"name":"ACHM3","type":"narrow"},{"name":"CNGB3 achromatopsia","type":"narrow"},{"name":"CNGB3 retinopathy","type":"exact"},{"name":"RMCH1","type":"narrow"},{"name":"RMCH1 (formerly)","type":"narrow"},{"name":"Rod monochromacy 1 (formerly)","type":"narrow"},{"name":"Rod monochromatism 1 (formerly)","type":"narrow"},{"name":"achromatopsia 3","type":"narrow"},{"name":"achromatopsia caused by mutation in CNGB3","type":"narrow"},{"name":"achromatopsia type 3","type":"narrow"},{"name":"achromatopsia with myopia","type":"narrow"},{"name":"rod monochromacy 1","type":"narrow"},{"name":"rod monochromacy 1, formerly","type":"narrow"},{"name":"rod monochromatism 1","type":"narrow"},{"name":"rod monochromatism 1, formerly","type":"narrow"},{"name":"total colorblindness with myopia","type":"narrow"}],"termid":"MONDO:0100446","xrefs":{"Monarch":{"xref_id":"0100446"}}}


id: PBO:0038881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 7","termid":"PBO:0038881"}


id: PBO:0038638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase 4","termid":"PBO:0038638"}


id: PBO:0046561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 3","termid":"PBO:0046561"}


id: PBQ:0000003
data:
  {"annotation_feature_type":"gene","cv_name":"pb_quiescence","definition":"Cell quiescence, i.e. a specialized resting state in which the cells do not grow or divide, and the gene expression pattern changes globally, that a cell enters following cell cycle arrest in G1 due to nitrogen limitation. In some cell types or under certain conditions, cellular metabolism may proceed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell quiescence following G1 arrest","termid":"PBQ:0000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell quiescence following G1 arrest due to nitrogen limitation","synonyms":[{"name":"cellular quiescence following G1 arrest due to nitrogen limitation","type":"exact"},{"name":"quiescence following G1 arrest due to nitrogen limitation","type":"broad"}],"termid":"PBQ:0000003"}


id: PBO:0076832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase RNA component","termid":"PBO:0076832"}


id: PBO:0079210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific serine kinase 2","termid":"PBO:0079210"}


id: GO:0008328
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multimeric assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand-gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex.","definition_xrefs":["PMID:20716669","PMID:34753794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel complex","termid":"GO:0034702"},{"relation_name":"is_a","term_name":"neurotransmitter receptor complex","termid":"GO:0098878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"ionotropic glutamate receptor complex","termid":"GO:0008328"}


id: PATO:0000061
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000061 relative pattern (obsolete PATO:0000061)","termid":"PATO:0000061"}


id: PBO:0003075
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Gpa2","termid":"PBO:0003075"}


id: PBO:0048767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glia maturation factor beta","termid":"PBO:0048767"}


id: PBO:0111863
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1 domain","termid":"PBO:0111863"}


id: PBO:0066327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of calcineurin 1","termid":"PBO:0066327"}


id: PBO:0060222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAX interactor 1, dimerization protein","termid":"PBO:0060222"}


id: PBO:0090993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HbrB family protein involved in TOR signaling Bit2","termid":"PBO:0090993"}


id: GO:0061356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the controlled release of a Wnt protein from a cell.","definition_xrefs":["PMID:19223472","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"regulates","term_name":"Wnt protein secretion","termid":"GO:0061355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of Wnt protein secretion","termid":"GO:0061356"}


id: GO:0000123
data:
  {"annotated_genes":["SJAG_00584","SJAG_00641","SJAG_00087","SJAG_02773","SJAG_03792","SJAG_00411","SJAG_02927","SJAG_01009","SJAG_05282","SJAG_03752","SJAG_00349","SJAG_01385","SJAG_01475","SJAG_00184","SJAG_00783","SJAG_04815","SJAG_02385","SJAG_00676","SJAG_03145","SJAG_03579","SJAG_01658","SJAG_03599","SJAG_04205","SJAG_03628","SJAG_04097","SJAG_02990","SJAG_02458","SJAG_04274","SJAG_02066","SJAG_00545","SJAG_03230","SJAG_00187","SJAG_02629","SJAG_04613","SJAG_01711","SJAG_02541","SJAG_03036","SJAG_04355","SJAG_04793","SJAG_03776","SJAG_02165","SJAG_03668"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90288],"is_not":false,"summary":null,"term":"GO:0000123"},{"annotations":[101590,106368,107257,92623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036410"},{"annotations":[109881,107258,108469,95835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033100"},{"annotations":[79635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990467"},{"annotations":[75431,74684,80856,81807,105967,81935,80065,106660,100873,69737,94252,108831,78060,74731,75557,79204,111031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035267"},{"annotations":[75270,78484,80660,73326,113733,63955,119574,75726,75556,90353,67704,78941,58070,77342,105296,72696,93287,62677,118286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000124"},{"annotations":[58497,63957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046695"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses histone acetyltransferase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetyltransferase complex","termid":"GO:0031248"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00184":null,"SJAG_00187":null,"SJAG_00349":null,"SJAG_00411":null,"SJAG_00545":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_00676":null,"SJAG_00783":null,"SJAG_01009":null,"SJAG_01385":null,"SJAG_01475":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_02066":null,"SJAG_02165":null,"SJAG_02385":null,"SJAG_02458":null,"SJAG_02541":null,"SJAG_02629":null,"SJAG_02773":null,"SJAG_02927":null,"SJAG_02990":null,"SJAG_03036":null,"SJAG_03145":null,"SJAG_03230":null,"SJAG_03579":null,"SJAG_03599":null,"SJAG_03628":null,"SJAG_03668":null,"SJAG_03752":null,"SJAG_03776":null,"SJAG_03792":null,"SJAG_04097":null,"SJAG_04205":null,"SJAG_04274":null,"SJAG_04355":null,"SJAG_04613":null,"SJAG_04793":null,"SJAG_04815":null,"SJAG_05282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"histone acetyltransferase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"histone acetylase complex","type":"exact"}],"termid":"GO:0000123","terms_by_termid":{"GO:0000123":null,"GO:0000124":null,"GO:0033100":null,"GO:0035267":null,"GO:0036410":null,"GO:0046695":null,"GO:1990467":null}}


id: PBO:0027028
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_telomere_during_meiotic_cell_cycle","termid":"PBO:0027028"}


id: FYPO:0004362
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to an old growing cell tip is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to cell tip during vegetative growth","termid":"FYPO:0002852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to old growing cell tip","synonyms":[{"name":"increased protein localisation to old growing cell tip","type":"exact"},{"name":"increased protein localization to old growing cell end","type":"exact"},{"name":"increased protein localization to old growing cell tip during mitotic cell cycle","type":"related"},{"name":"increased protein localization to old growing cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0004362"}


id: PBO:0079452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUSC2 pseudogene 2","termid":"PBO:0079452"}


id: GO:0033016
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a rhoptry.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"rhoptry","termid":"GO:0020008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"rhoptry membrane","termid":"GO:0033016"}


id: GO:0061934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an adenine biosynthetic process.","definition_xrefs":["PMID:19933844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of purine nucleobase metabolic process","termid":"GO:0006141"},{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"adenine biosynthetic process","termid":"GO:0046084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"regulation of adenine biosynthetic process","termid":"GO:0061934"}


id: FYPO:0007793
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which an increase in RNA level that occurs as part of a cellular response to oxidative stress begins later than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah","PMID:10428959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to oxidative stress during vegetative growth","termid":"FYPO:0001340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of increase in RNA level during cellular response to oxidative stress","synonyms":[{"name":"delayed increase in RNA level during cellular response to oxidative stress","type":"exact"},{"name":"delayed onset of increase in RNA level during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"delayed onset of increase in RNA level during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"delayed onset of increase in RNA level in response to oxidative stress","type":"exact"},{"name":"delayed onset of increase in transcript level during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0007793"}


id: GO:0003073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates the force with which blood travels through the systemic arterial circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood pressure","termid":"GO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"}


id: FYPO:0006652
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a DNA/DNA annealing activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal DNA/DNA annealing activity","termid":"FYPO:0005438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000653"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000653"],"is_obsolete":false,"name":"increased DNA/DNA annealing activity","termid":"FYPO:0006652"}


id: PBO:0078639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone receptor interactor 13","termid":"PBO:0078639"}


id: PBO:0062843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoclast stimulating factor 1","termid":"PBO:0062843"}


id: MONDO:0003644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cavernous hemangioma arising from the colon.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign colon neoplasm","termid":"MONDO:0002278"},{"relation_name":"is_a","term_name":"cavernous hemangioma","termid":"MONDO:0003155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004335"],"is_obsolete":false,"name":"cavernous hemangioma of colon","secondary_identifiers":["DOID:5775","UMLS:C1333086","MEDGEN:232084","NCIT:C5395"],"synonyms":[{"name":"cavernous angioma of colon","type":"exact"},{"name":"cavernous angioma of the colon","type":"exact"},{"name":"cavernous hemangioma of colon","type":"exact"},{"name":"cavernous hemangioma of the colon","type":"exact"},{"name":"colon cavernous angioma","type":"exact"},{"name":"colon cavernous hemangioma","type":"exact"},{"name":"colonic cavernous angioma","type":"exact"},{"name":"colonic cavernous hemangioma","type":"exact"}],"termid":"MONDO:0003644","xrefs":{"Monarch":{"xref_id":"0003644"}}}


id: PBO:0026792
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_enfumafungin","termid":"PBO:0026792"}


id: GO:0031812
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P2Y1 nucleotide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled nucleotide receptor binding","termid":"GO:0031811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"P2Y1 nucleotide receptor binding","synonyms":[{"name":"P2Y1 nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031812"}


id: PBO:0027577
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_pseudohyphal_growth","termid":"PBO:0027577"}


id: PBO:0042986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint kinase 1","termid":"PBO:0042986"}


id: PBO:0051533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 3 receptor subunit alpha","termid":"PBO:0051533"}


id: GO:0000282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the site where a daughter cell will form, in organisms that reproduce by budding. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of cell polarity","termid":"GO:0030010"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic cytokinesis","termid":"GO:0000281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"part_of","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0008150","GO:0000281","GO:0007049","GO:0007163"],"is_obsolete":false,"name":"cellular bud site selection","synonyms":[{"name":"bud site selection/establishment of cell polarity","type":"broad"}],"termid":"GO:0000282"}


id: MONDO:0006500
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007154"}]},"cv_name":"mondo","definition":"A benign vascular lesion characterized by the formation of capillary-sized or cavernous vascular channels.","definition_xrefs":["NCIT:C3085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign blood vessel neoplasm","termid":"MONDO:0024286"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"is_obsolete":false,"name":"hemangioma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0018916","HP:0001028","DOID:255","EFO:1000635","ICD9:228.0","ICDO:9120/0","ICD9:228.09","ICD9:228.00","MEDGEN:5477","MESH:D006391","ONCOTREE:HEMA","SCTID:400210000"],"synonyms":[{"name":"angioma","type":"related"},{"name":"benign angioma","type":"related"},{"name":"benign hemangioma","type":"exact"},{"name":"hemangioma","type":"exact"},{"name":"hemangioma, benign","type":"exact"}],"termid":"MONDO:0006500","terms_by_termid":{"MONDO:0007154":null},"xrefs":{"Monarch":{"xref_id":"0006500"}}}


id: MONDO:0006176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma characterized by the presence of a cribriform architectural pattern. Representative examples include the intraductal cribriform breast carcinoma and invasive cribriform breast carcinoma.","definition_xrefs":["NCIT:C3680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cribriform carcinoma","secondary_identifiers":["ICDO:8201/3","UMLS:C0205643","EFO:1000210","MEDGEN:104694"],"synonyms":[{"name":"cribriform carcinoma","type":"exact"}],"termid":"MONDO:0006176","xrefs":{"Monarch":{"xref_id":"0006176"}}}


id: PBO:0031643
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_shmoo_formation","termid":"PBO:0031643"}


id: MONDO:1012963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Centronuclear myopathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy, non-human animal","termid":"MONDO:1010196"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centronuclear myopathy, non-human animal","termid":"MONDO:1012963","xrefs":{"Monarch":{"xref_id":"1012963"}}}


id: MONDO:0014225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary hemochromatosis in which the cause of the disease is a mutation in the FTH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hemochromatosis","termid":"MONDO:0006507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hemochromatosis type 5","secondary_identifiers":["MESH:C565020","DOID:0111031","Orphanet:247790","OMIM:615517","GARD:13472","MEDGEN:341982","Orphanet:447792","UMLS:C1851316"],"synonyms":[{"name":"FTH1 hereditary hemochromatosis","type":"exact"},{"name":"FTH1-associated iron overload","type":"exact"},{"name":"FTH1-related iron overload","type":"exact"},{"name":"HFE5","type":"exact"},{"name":"hemochromatosis, type 5","type":"related"},{"name":"hereditary hemochromatosis caused by mutation in FTH1","type":"exact"},{"name":"iron overload, autosomal dominant","type":"related"}],"termid":"MONDO:0014225","xrefs":{"Monarch":{"xref_id":"0014225"}}}


id: GO:0044703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A biological process that directly contributes to the process of producing new individuals, involving another organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multi-organism reproductive process","termid":"GO:0044703"}


id: GO:0050200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: acyl-CoA + 1-O-alk-1-enyl-glycero-3-phosphocholine = CoA + plasmenylcholine.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete plasmalogen synthase activity (obsolete GO:0050200)","synonyms":[{"name":"1-alkenyl-glycero-3-phosphorylcholine:acyl-CoA acyltransferase activity","type":"related"},{"name":"O-1-alkenylglycero-3-phosphorylcholine acyltransferase activity","type":"related"},{"name":"acyl-CoA:1-O-alk-1-enyl-glycero-3-phosphocholine 2-O-acyltransferase activity","type":"related"},{"name":"lysoplasmenylcholine acyltransferase activity","type":"related"}],"termid":"GO:0050200"}


id: GO:0036098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which an organism or tissue maintains a population of male germ-line stem cells.","definition_xrefs":["PMID:21752937","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ-line stem cell population maintenance","termid":"GO:0030718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male germ-line stem cell population maintenance","termid":"GO:0036098"}


id: GO:0097381
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Stack of disc membranes located inside a photoreceptor outer segment, and containing densely packed molecules of photoreceptor proteins that traverse the lipid bilayer. Disc membranes arise as evaginations of the ciliary membrane during the development of the outer segment and may or may not remain contiguous with the ciliary membrane.","definition_xrefs":["PMID:11826267","PMID:19501669","GOC:pde","GOC:bj","PMID:2537204","PMID:26574505","GOC:krc","PMID:7507907","PMID:6771304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"photoreceptor outer segment","termid":"GO:0001750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"photoreceptor disc membrane","termid":"GO:0097381"}


id: PBO:0049172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosaminoglycan regulatory associated long non-coding RNA","termid":"PBO:0049172"}


id: PBO:0045568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 16","termid":"PBO:0045568"}


id: GO:0014074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a purine-containing compound stimulus.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to purine-containing compound","synonyms":[{"name":"response to purine","type":"related"}],"termid":"GO:0014074"}


id: FYPO:0001832
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which phosphoglycerate mutase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal phosphoglycerate mutase activity","termid":"FYPO:0001831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abolished phosphoglycerate mutase activity","synonyms":[{"name":"phosphoglycerate mutase activity abolished","type":"exact"}],"termid":"FYPO:0001832"}


id: PR:O74914
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hsp3101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-independent glyoxalase hsp3101 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.03c","synonyms":[{"name":"Spom972h-hsp3101","type":"exact"},{"name":"glyoxalase 3 homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heat shock protein 31 homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74914"}


id: PBO:0049387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF3C6 pseudogene 3","termid":"PBO:0049387"}


id: _global:results_in_developmental_progression_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p results in the developmental progression of s iff p is a developmental process and s is an anatomical structure and p causes s to undergo a change in state at some point along its natural developmental cycle (this cycle starts with its formation, through the mature structure, and ends with its loss).","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_related_to","termid":"RO:0002324"},{"relation_name":"is_a","term_name":"developmentally_related_to","termid":"_global:developmentally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_developmental_progression_of","secondary_identifiers":["RO:0002295"],"termid":"_global:results_in_developmental_progression_of"}


id: GO:0018590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: methylsilanetriol + O2 + 2 H+ + 2 e- = H2O + hydroxymethylsilanetriol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete methylsilanetriol hydroxylase activity (obsolete GO:0018590)","termid":"GO:0018590"}


id: PATO:0002250
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A degree of pigmentation quality that is relative high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"pigmented","termid":"PATO:0002248"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased pigmentation","synonyms":[{"name":"hyperpigmented","type":"exact"}],"termid":"PATO:0002250"}


id: GO:0050920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a motile cell or organism in response to a specific chemical concentration gradient.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"regulation of locomotion","termid":"GO:0040012"},{"relation_name":"regulates","term_name":"chemotaxis","termid":"GO:0006935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chemotaxis","termid":"GO:0050920"}


id: GO:0048452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the petal. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ structural organization","termid":"GO:0048450"},{"relation_name":"part_of","term_name":"petal morphogenesis","termid":"GO:0048446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"petal structural organization","secondary_identifiers":["GO:0048420"],"synonyms":[{"name":"petal structural organisation","type":"exact"}],"termid":"GO:0048452"}


id: PBO:0063294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily B, 8 pseudogene","termid":"PBO:0063294"}


id: GO:0102202
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + solasodine = UDP + solasodine 3-O-beta-D-glucopyranoside + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete soladodine glucosyltransferase activity (obsolete GO:0102202)","termid":"GO:0102202"}


id: GO:0009249
data:
  {"annotated_genes":["SJAG_01164"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107184],"is_not":false,"summary":null,"term":"GO:0009249"}]},"cv_name":"biological_process","definition":"The lipoylation of peptidyl-lysine to form peptidyl-N6-lipoyl-L-lysine.","definition_xrefs":["RESID:AA0118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01164":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"protein lipoylation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0018055","Reactome:R-HSA-9857492"],"synonyms":[{"name":"peptidyl-lysine lipoylation","type":"exact"},{"name":"protein-lipoic acid cofactor linkage","type":"exact"}],"termid":"GO:0009249","terms_by_termid":{"GO:0009249":null}}


id: PBO:0005313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin Atg20 (predicted)","termid":"PBO:0005313"}


id: GO:0002438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An acute inflammatory response to an antigenic stimulus. An acute inflammatory response occurs within a matter of minutes or hours, and either resolves within a few days or becomes a chronic inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory response to antigenic stimulus","termid":"GO:0002437"},{"relation_name":"is_a","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acute inflammatory response to antigenic stimulus","termid":"GO:0002438"}


id: PBO:0035750
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_secondary_cell_septum_thickness","termid":"PBO:0035750"}


id: MONDO:0032798
data:
  {"annotated_genes":["SJAG_01356","SJAG_02885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88814,88815],"is_not":false,"summary":null,"term":"MONDO:0032798"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null},"genotype_count":0,"is_obsolete":false,"name":"ichthyotic keratoderma, spasticity, hypomyelination, and dysmorphic facial features","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5193147","MEDGEN:1682428","OMIM:618527"],"synonyms":[{"name":"ICHTHYOTIC KERATODERMA, SPASTICITY, HYPOMYELINATION, AND DYSMORPHIC FACIAL FEATURES","type":"related"},{"name":"IKSHD","type":"related"},{"name":"ichthyotic keratoderma, spasticity, hypomyelination, and dysmorphic facies","type":"exact"}],"termid":"MONDO:0032798","terms_by_termid":{"MONDO:0032798":null},"xrefs":{"Monarch":{"xref_id":"0032798"}}}


id: PBO:0083539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YIP4/YGL198W","termid":"PBO:0083539"}


id: PBO:0090058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase Fol2","termid":"PBO:0090058"}


id: GO:0043878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glyceraldehyde 3-phosphate + NAD+ + H2O = 3-phospho-D-glycerate + NADH + H+.","definition_xrefs":["PMID:9497334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] (non-phosphorylating) activity","termid":"GO:0120533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity","secondary_identifiers":["MetaCyc:RXN-3443","RHEA:42760"],"synonyms":[{"name":"NAD+-dependent glyceraldehyde-3-phosphate dehydrogenase activity","type":"exact"},{"name":"glyceraldehyde-3-phosphate dehydrogenase (NAD) (non-phosphorylating) activity","type":"exact"},{"name":"glyceraldehyde-3-phosphate dehydrogenase (NAD) activity","type":"exact"},{"name":"non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NAD)","type":"exact"}],"termid":"GO:0043878"}


id: GO:1902656
data:
  {"annotated_genes":["SJAG_05229","SJAG_01090","SJAG_02877","SJAG_03631","SJAG_04551","SJAG_00296","SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76217,116436,94281,68214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[115354,93095],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[104076],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"The directed movement of calcium ion into a cytosol.","definition_xrefs":["GOC:vw","GOC:TermGenie","GO_REF:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transport","termid":"GO:0006816"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_01090":null,"SJAG_02877":null,"SJAG_03631":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"calcium ion import into cytosol","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"calcium import into cytosol","type":"broad"}],"termid":"GO:1902656","terms_by_termid":{"GO:0098703":null,"GO:1905665":null,"GO:1905949":null}}


id: PBO:0053553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 560","termid":"PBO:0053553"}


id: GO:0035303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of removal of phosphate groups from a molecule.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"regulates","term_name":"dephosphorylation","termid":"GO:0016311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dephosphorylation","termid":"GO:0035303"}


id: MONDO:0030986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blistering, acantholytic, of oral and laryngeal mucosa","secondary_identifiers":["OMIM:619226","UMLS:C5543184","MEDGEN:1785588"],"synonyms":[{"name":"ABOLM","type":"exact"}],"termid":"MONDO:0030986","xrefs":{"Monarch":{"xref_id":"0030986"}}}


id: PBO:0075181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 11","termid":"PBO:0075181"}


id: MONDO:0005896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with viruses of the family paramyxoviridae. This includes morbillivirus infections; respirovirus infections; pneumovirus infections; henipavirus infections; avulavirus infections; and rubulavirus infections.","definition_xrefs":["MESH:D018184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mononegavirales infectious disease","termid":"MONDO:0005856"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Paramyxoviridae infectious disease","secondary_identifiers":["EFO:0007419"],"synonyms":[{"name":"Paramyxoviridae caused disease or disorder","type":"exact"},{"name":"Paramyxoviridae disease or disorder","type":"exact"}],"termid":"MONDO:0005896","xrefs":{"Monarch":{"xref_id":"0005896"}}}


id: GO:0017043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A polypeptide hormone which stimulates the adrenal cortex to synthesize and secrete glucocorticoid hormones.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete adrenocorticotropin (obsolete GO:0017043)","synonyms":[{"name":"adrenocorticotropin","type":"exact"},{"name":"corticotropin","type":"broad"}],"termid":"GO:0017043"}


id: PBO:0028931
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_non-growing_cell_tip","termid":"PBO:0028931"}


id: GO:0001227
data:
  {"annotated_genes":["SJAG_03473","SJAG_00792","SJAG_05343","SJAG_02730","SJAG_04813","SJAG_04009","SJAG_02048","SJAG_00124","SJAG_00987","SJAG_04584"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62322,70386,82243,95182,96623,106386,106394,108209,110782,112868],"is_not":false,"summary":null,"term":"GO:0001227"}]},"cv_name":"molecular_function","definition":"A DNA-binding transcription factor activity that represses or decreases the transcription of specific gene sets transcribed by RNA polymerase II.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor activity, RNA polymerase II-specific","termid":"GO:0000981"},{"relation_name":"is_a","term_name":"DNA-binding transcription repressor activity","termid":"GO:0001217"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00792":null,"SJAG_00987":null,"SJAG_02048":null,"SJAG_02730":null,"SJAG_03473":null,"SJAG_04009":null,"SJAG_04584":null,"SJAG_04813":null,"SJAG_05343":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0001217"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003700"}],"interesting_parent_ids":["GO:0001217","GO:0140110","GO:0003674","GO:0003700"],"is_obsolete":false,"name":"DNA-binding transcription repressor activity, RNA polymerase II-specific","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0001206","GO:0001078","GO:0001210","GO:0001214"],"synonyms":[{"name":"RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"RNA polymerase II distal enhancer sequence-specific DNA-binding transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription","type":"exact"},{"name":"RNA polymerase II transcriptional repressor activity, metal ion regulated core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"RNA polymerase II transcriptional repressor activity, metal ion regulated proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"distal enhancer DNA-binding transcription repressor activity, RNA polymerase II-specific","type":"narrow"},{"name":"metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"metal ion regulated sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"proximal promoter DNA-binding transcription repressor activity, RNA polymerase II-specific","type":"narrow"},{"name":"sequence-specific distal enhancer binding RNA polymerase II transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"transcriptional repressor activity, RNA polymerase II distal enhancer sequence-specific binding","type":"narrow"},{"name":"transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding","type":"exact"},{"name":"transcriptional repressor activity, metal ion regulated sequence-specific DNA binding","type":"narrow"}],"termid":"GO:0001227","terms_by_termid":{"GO:0001227":null}}


id: GO:0051618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of histamine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter uptake","termid":"GO:0051582"},{"relation_name":"is_a","term_name":"regulation of histamine uptake","termid":"GO:0051616"},{"relation_name":"positively_regulates","term_name":"histamine uptake","termid":"GO:0051615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of histamine uptake","synonyms":[{"name":"activation of histamine uptake","type":"narrow"},{"name":"positive regulation of histamine import","type":"exact"},{"name":"stimulation of histamine uptake","type":"narrow"},{"name":"up regulation of histamine uptake","type":"exact"},{"name":"up-regulation of histamine uptake","type":"exact"},{"name":"upregulation of histamine uptake","type":"exact"}],"termid":"GO:0051618"}


id: PBO:0046220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 13","termid":"PBO:0046220"}


id: PBO:0056936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7-1","termid":"PBO:0056936"}


id: GO:0071536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by a RING-like zinc finger domain interaction.","definition_xrefs":["GOC:amm","InterPro:IPR014857"],"gene_count":0,"genotype_count":0,"name":"obsolete RING-like zinc finger domain-mediated complex assembly (obsolete GO:0071536)","synonyms":[{"name":"RING-like domain-mediated complex assembly","type":"exact"}],"termid":"GO:0071536"}


id: PR:O14423
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A major centromere autoantigen B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-B homolog protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.10c","secondary_identifiers":["UniProtKB:O14423"],"synonyms":[{"name":"CBHP-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC9E9.10c","type":"related"},{"name":"Spom972h-CENPB","type":"exact"},{"name":"cbh","type":"related"}],"termid":"PR:O14423"}


id: MONDO:0023696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease with similar features to Marinesco-Sjogren syndrome.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Marinesco-Sjogren-like syndrome","secondary_identifiers":["OMIM:248810","MEDGEN:163207","UMLS:C0796036","MESH:C535913"],"synonyms":[{"name":"Marinesco-Sjogren-like syndrome (MSLS)","type":"related"},{"name":"juvenile cataract, cerebellar atrophy, intellectual disability, and myopathy","type":"related"},{"name":"juvenile cataract, cerebellar atrophy, mental retardation, and myopathy","type":"related"}],"termid":"MONDO:0023696","xrefs":{"Monarch":{"xref_id":"0023696"}}}


id: PBO:0005796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside-triphosphatase involved in SSU-rRNA maturation (predicted)","termid":"PBO:0005796"}


id: PBO:0041213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1D nuclear receptor corepressor pseudogene 1","termid":"PBO:0041213"}


id: PBO:0072970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1C member 2","termid":"PBO:0072970"}


id: GO:0015794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which glycerol-3-phosphate is transported across a membrane. Glycerol-3-phosphate is a phosphoric monoester of glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"glycerol-3-phosphate transmembrane transport","synonyms":[{"name":"glycerol-3-phosphate transport","type":"related"}],"termid":"GO:0015794"}


id: MONDO:0019439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Secondary amyloidosis is a form of amyloidosis, that complicates chronic inflammatory disorders (mainly rheumatoid arthritis) and is characterized by the aggregation and deposition of amyloid fibrils composed of serum amyloid A protein, an acute phase reactant. Although spleen, suprarenal gland, liver and gut are frequent sites of amyloid deposition, the clinical picture is dominated by renal involvement.","definition_xrefs":["Orphanet:85445"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"non-familial restrictive cardiomyopathy","termid":"MONDO:0016345"},{"relation_name":"is_a","term_name":"amyloidosis","termid":"MONDO:0019065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179","MONDO:0005267"],"is_obsolete":false,"name":"AA amyloidosis","secondary_identifiers":["MEDGEN:782429","MedDRA:10039811","NCIT:C3818","DOID:0080936","SCTID:281034005","UMLS:C3536715","icd11.foundation:570181034","ICD9:277.39","GARD:10560"],"synonyms":[{"name":"amyloid A amyloidosis","type":"related"},{"name":"amyloidosis AA","type":"related"},{"name":"inflammatory amyloidosis","type":"exact"},{"name":"reactive amyloidosis","type":"exact"},{"name":"secondary amyloidosis","type":"exact"}],"termid":"MONDO:0019439","xrefs":{"Monarch":{"xref_id":"0019439"}}}


id: PBO:0065643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 21","termid":"PBO:0065643"}


id: GO:1990385
data:
  {"annotated_genes":["SJAG_04412","SJAG_00930","SJAG_03073","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103356,105470,118669,120718],"is_not":false,"summary":null,"term":"GO:1990385"}]},"cv_name":"cellular_component","definition":"The area in the center of the meiotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["GOC:kmv","PMID:12707312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle midzone","termid":"GO:0051233"},{"relation_name":"part_of","term_name":"meiotic spindle","termid":"GO:0072687"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00930":null,"SJAG_01837":null,"SJAG_03073":null,"SJAG_04412":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"meiotic spindle midzone","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990385","terms_by_termid":{"GO:1990385":null}}


id: PBO:0080049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP21 pseudogene 1","termid":"PBO:0080049"}


id: GO:0052464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of programmed cell death in a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont programmed cell death (obsolete GO:0052464)","synonyms":[{"name":"modulation by organism of symbiont programmed cell death","type":"exact"},{"name":"modulation of symbiont HR","type":"broad"},{"name":"modulation of symbiont PCD","type":"exact"},{"name":"modulation of symbiont hypersensitive response","type":"narrow"}],"termid":"GO:0052464"}


id: PBO:0048695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLIS family zinc finger 3","termid":"PBO:0048695"}


id: MONDO:0006963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that arises from the sebaceous glands. Representative examples include sebaceous adenoma and sebaceous carcinoma.","definition_xrefs":["NCIT:C3363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal appendage tumor","termid":"MONDO:0002297"},{"relation_name":"is_a","term_name":"sebaceous gland disorder","termid":"MONDO:0006607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"sebaceous gland neoplasm","secondary_identifiers":["MEDGEN:19911","ICD9:239.2","MESH:D012626","UMLS:C0036503","SCTID:126491004","DOID:5759","EFO:1001172"],"synonyms":[{"name":"neoplasm of sebaceous gland","type":"exact"},{"name":"sebaceous gland neoplasm","type":"exact"},{"name":"sebaceous gland neoplasm (disease)","type":"exact"},{"name":"sebaceous gland tumor","type":"exact"},{"name":"sebaceous gland tumour","type":"exact"},{"name":"sebaceous neoplasm","type":"exact"},{"name":"sebaceous tumor","type":"exact"},{"name":"sebaceous tumour","type":"exact"},{"name":"tumor of sebaceous gland","type":"exact"},{"name":"tumour of sebaceous gland","type":"exact"}],"termid":"MONDO:0006963","xrefs":{"Monarch":{"xref_id":"0006963"}}}


id: GO:0036520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling that mediates the transfer of information from an astrocyte to a dopaminergic neuron.","definition_xrefs":["GOC:bf","PMID:21752258","GOC:PARL","PMID:12794311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell-neuron signaling","termid":"GO:0150098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"astrocyte-dopaminergic neuron signaling","synonyms":[{"name":"astrocyte-dopaminergic neuron cell signaling","type":"exact"},{"name":"dopaminergic neuron-astrocyte crosstalk","type":"related"},{"name":"mesencephalic dopaminergic neuron-astrocyte crosstalk","type":"narrow"},{"name":"midbrain dopaminergic neuron-astrocyte crosstalk","type":"narrow"}],"termid":"GO:0036520"}


id: MONDO:0007589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"FZD4-related exudative vitreoretinopathy","termid":"MONDO:1040041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"exudative vitreoretinopathy 1","secondary_identifiers":["DOID:0111412","MESH:C536382","MEDGEN:343561","OMIM:133780","UMLS:C1851402","GARD:15068","NCIT:C175048"],"synonyms":[{"name":"Criswick-Schepens syndrome","type":"related"},{"name":"EVR1","type":"related"},{"name":"FEVR, autosomal dominant","type":"related"},{"name":"exudative vitreoretinopathy 1","type":"exact"},{"name":"exudative vitreoretinopathy type 1","type":"exact"},{"name":"exudative vitreoretinopathy, familial, autosomal dominant","type":"related"},{"name":"retinopathy of prematurity","type":"related"}],"termid":"MONDO:0007589","xrefs":{"Monarch":{"xref_id":"0007589"}}}


id: MONDO:0005912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The misuse of phencyclidine with associated psychological symptoms and impairment in social or occupational functioning.","definition_xrefs":["MESH:D010623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance abuse","termid":"MONDO:0002491"},{"relation_name":"is_a","term_name":"drug dependence","termid":"MONDO:0005303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phencyclidine abuse","secondary_identifiers":["ICD9:305.90","UMLS:C0031391","MEDGEN:19234","SCTID:7071007","DOID:5062"],"synonyms":[{"name":"PCP abuse","type":"exact"},{"name":"phencyclidine abuse","type":"exact"}],"termid":"MONDO:0005912","xrefs":{"Monarch":{"xref_id":"0005912"}}}


id: GO:0016223
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-alanine + 2-oxopropanoate = pyruvate + beta-alanine.","definition_xrefs":["RHEA:14077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016740","GO:0016769","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"beta-alanine:pyruvate transaminase activity","secondary_identifiers":["Reactome:R-HSA-909776","EC:2.6.1.18","MetaCyc:2.6.1.18-RXN"],"synonyms":[{"name":"L-alanine:3-oxopropanoate aminotransferase activity","type":"related"},{"name":"beta-alanine--pyruvate aminotransferase activity","type":"related"},{"name":"beta-alanine-alpha-alanine transaminase activity","type":"related"},{"name":"beta-alanine-pyruvate aminotransferase activity","type":"exact"},{"name":"omega-amino acid--pyruvate aminotransferase activity","type":"related"}],"termid":"GO:0016223"}


id: GO:0052806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sulfite + 3 1,5-dihydrocoenzyme F420 = hydrogen sulfide + 3 H2O + 3 coenzyme F420. 1,5-dihydrocoenzyme F420 is also known as reduced coenzyme F420.","definition_xrefs":["GOC:mengo_curators","PMID:16048999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"sulfite reductase (coenzyme F420) activity","synonyms":[{"name":"coenzyme F420-dependent sulfite reductase activity","type":"exact"},{"name":"coenzyme F420-sulfite reductase activity","type":"exact"},{"name":"hydrogen-sulfide:coenzyme F420 oxidoreductase activity","type":"exact"},{"name":"sulfite:reduced coenzyme F420 reductase activity","type":"exact"}],"termid":"GO:0052806"}


id: PBO:0065493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone 2","termid":"PBO:0065493"}


id: PBO:0006197
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-occurs_at","termid":"PBO:0006197"}


id: GO:0060118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a vestibular receptor cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear receptor cell development","termid":"GO:0060119"},{"relation_name":"part_of","term_name":"vestibular receptor cell differentiation","termid":"GO:0060114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibular receptor cell development","synonyms":[{"name":"vestibular hair cell development","type":"exact"}],"termid":"GO:0060118"}


id: GO:0090636
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The desmosomal part containing plakoglobins, plakophilins, the N-termini of desmoplakins, as well as the cytoplasmic tails of the desmosomal cadherins, which together attach the plaque to the plasma membrane.","definition_xrefs":["PMID:20066089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"desmosome","termid":"GO:0030057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"outer dense plaque of desmosome","termid":"GO:0090636"}


id: PBO:0058715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6843","termid":"PBO:0058715"}


id: PBO:0053669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 850","termid":"PBO:0053669"}


id: GO:0005995
data:
  {"annotated_genes":["SJAG_02949"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69614],"is_not":false,"summary":null,"term":"GO:0005995"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of melibiose, the disaccharide 6-O-alpha-D-galactopyranosyl-D-glucose.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melibiose metabolic process","termid":"GO:0005994"},{"relation_name":"is_a","term_name":"disaccharide catabolic process","termid":"GO:0046352"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02949":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"melibiose catabolic process","references_by_uniquename":{"GO_REF:0000117":null},"synonyms":[{"name":"melibiose breakdown","type":"exact"},{"name":"melibiose catabolism","type":"exact"},{"name":"melibiose degradation","type":"exact"}],"termid":"GO:0005995","terms_by_termid":{"GO:0005995":null}}


id: PBO:0041044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 1","termid":"PBO:0041044"}


id: PBO:0029527
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_pigment_accumulation_during_cellular_response_to_cadmium_ion","termid":"PBO:0029527"}


id: GO:1990272
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with anti-Mullerian hormone to initiate a change in cell activity.","definition_xrefs":["PMID:23624077","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"anti-Mullerian hormone receptor activity","termid":"GO:1990272"}


id: MONDO:0034039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic hemoglobinopathy (obsolete MONDO:0034039)","secondary_identifiers":["Orphanet:466066"],"termid":"MONDO:0034039","xrefs":{"Monarch":{"xref_id":"0034039"}}}


id: MONDO:0100267
data:
  {"annotated_genes":["SJAG_02693"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013949"},{"annotations":[89094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013950"}]},"cv_name":"mondo","definition":"Any Zellweger spectrum disorder in which the cause of the disease is a mutation in the PEX13 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Zellweger spectrum disorders","termid":"MONDO:0019609"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005244","MONDO:0019053","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"peroxisome biogenesis disorder due to PEX13 defect","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PEX13 related Zellweger spectrum disorder","type":"exact"},{"name":"peroxisome biogenesis disorder due to PEX13 defect","type":"exact"}],"termid":"MONDO:0100267","terms_by_termid":{"MONDO:0013949":null,"MONDO:0013950":null},"xrefs":{"Monarch":{"xref_id":"0100267"}}}


id: GO:0052757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of hexosaminic linkages in chondroitin, a linear polymer structure composed of the repeating disaccharide unit [->4)-D-glucuronic acid-(1->3)-N-acetyl-D-galactosamine-(1-], also written as [->4GlcUA1->3GalNAc1-].","definition_xrefs":["GOC:mengo_curators","PMID:18390555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endogalactosaminidase activity","termid":"GO:0033931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"chondroitin hydrolase activity","synonyms":[{"name":"chondroitin endo-beta-galactosaminidase activity","type":"exact"}],"termid":"GO:0052757"}


id: MONDO:0971123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal hemangioblastoma","termid":"MONDO:0003343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated retinal racemose hemangioma","secondary_identifiers":["MEDGEN:1863667","Orphanet:674924","UMLS:C5890449"],"termid":"MONDO:0971123","xrefs":{"Monarch":{"xref_id":"0971123"}}}


id: GO:0002720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of cytokine production that contributes to an immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"positive regulation of production of molecular mediator of immune response","termid":"GO:0002702"},{"relation_name":"is_a","term_name":"regulation of cytokine production involved in immune response","termid":"GO:0002718"},{"relation_name":"positively_regulates","term_name":"cytokine production involved in immune response","termid":"GO:0002367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of cytokine production involved in immune response","secondary_identifiers":["GO:0002741","GO:0002744"],"synonyms":[{"name":"activation of cytokine production during immune response","type":"narrow"},{"name":"positive regulation of cytokine biosynthetic process involved in immune response","type":"narrow"},{"name":"positive regulation of cytokine production during immune response","type":"related"},{"name":"positive regulation of cytokine secretion involved in immune response","type":"narrow"},{"name":"stimulation of cytokine production during immune response","type":"narrow"},{"name":"up regulation of cytokine production during immune response","type":"related"},{"name":"up-regulation of cytokine production during immune response","type":"related"},{"name":"upregulation of cytokine production during immune response","type":"related"}],"termid":"GO:0002720"}


id: PBO:0086873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative sterol transfer protein; one of six StART-like domain-containing proteins in yeast that may be involved in sterol transfer between intracellular membranes; conserved across eukaryotes; has both GRAM and StART-like (VASt) domains; localizes to membrane contact sites throughout the cell, including nucleus-vacuole junctions and ER-mitochondrial contact sites","termid":"PBO:0086873"}


id: PBO:0004513
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.16","termid":"PBO:0004513"}


id: GO:0060274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The homeostatic process in which a population of cells changes its metabolic activity resulting in the rate of death in the population equaling the rate of reproduction. Stationary phase can be in response to limited nutrients or a build-up of toxic substances in the environment.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of stationary phase (obsolete GO:0060274)","termid":"GO:0060274"}


id: MONDO:0013796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"17q12 microduplication syndrome is a rare chromosomal anomaly with variable phenotypic expression and reduced penetrance associated with developmental delay, mild to severe intellectual disability, speech delay, seizures, microcephaly, behavioral abnormalities, autism spectrum disorder, eye or vision defects (such as strabismus, astigmatism, amblyopia, cataract, coloboma, and microphthalmia), non-specific dysmorphic features, hypotonia, cardiac and renal anomalies, schizophrenia.","definition_xrefs":["Orphanet:261272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 17","termid":"MONDO:0016967"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17q12 duplication syndrome","secondary_identifiers":["OMIM:614526","SCTID:764435003","MEDGEN:482767","DOID:0060433","GARD:13296","UMLS:C3281137"],"synonyms":[{"name":"17q12 duplication","type":"related"},{"name":"17q12 microduplication","type":"related"},{"name":"17q12 microduplication syndrome","type":"exact"},{"name":"chromosome 17q12 duplication syndrome","type":"exact"},{"name":"dup(17)(q12)","type":"exact"},{"name":"recurrent duplication of 17q12","type":"related"},{"name":"trisomy 17q12","type":"exact"}],"termid":"MONDO:0013796","xrefs":{"Monarch":{"xref_id":"0013796"}}}


id: MOD:01279
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["PubMed:11283024","PubMed:1443554","Unimod:253#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crotonaldehyde","termid":"MOD:00576"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crotonaldehyde - site H","synonyms":[{"name":"Crotonaldehyde","type":"related"}],"termid":"MOD:01279"}


id: PBO:0072448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 12","termid":"PBO:0072448"}


id: PBO:0075693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid 5 alpha-reductase 3","termid":"PBO:0075693"}


id: PBO:0078669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 3-4","termid":"PBO:0078669"}


id: PBO:0060452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyl-alpha-glucosaminidase","termid":"PBO:0060452"}


id: MONDO:0016115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A bulbospinal muscular atrophy that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"gene_count":0,"genotype_count":0,"name":"obsolete bulbospinal muscular atrophy of adulthood (obsolete MONDO:0016115)","secondary_identifiers":["Orphanet:206707"],"synonyms":[{"name":"adult bulbospinal muscular atrophy","type":"exact"},{"name":"bulbospinal muscular atrophy of adult","type":"related"},{"name":"bulbospinal muscular atrophy of adults","type":"exact"}],"termid":"MONDO:0016115","xrefs":{"Monarch":{"xref_id":"0016115"}}}


id: MONDO:0013334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fetal encasement syndrome is a rare, lethal developmental defect during embryogenesis characterized by severe fetal malformations, including craniofacial dysmorphism (abnormal cyst in the cranial region, hypoplastic eyeballs, two orifices in the nasal region separated by a nasal septum, abnormal orifice replacing the mouth), omphalocele and immotile, hypoplastic limbs encased under an abnormal, transparent, membrane-like skin. Additional features include absence of adnexal structures of the skin on the outer aspect of the limbs, as well as underdeveloped skeletal muscles and bones. Association with tetralogy of Fallot, horse-shoe kidneys and diaphragm and lung lobulation defects is reported.","definition_xrefs":["Orphanet:465824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cocoon syndrome","secondary_identifiers":["MEDGEN:462241","DOID:0060647","OMIM:613630","UMLS:C3150891","GARD:17823"],"synonyms":[{"name":"cocoon syndrome","type":"exact"},{"name":"fetal encasement syndrome","type":"exact"},{"name":"foetal encasement syndrome","type":"exact"}],"termid":"MONDO:0013334","xrefs":{"Monarch":{"xref_id":"0013334"}}}


id: PBO:0002255
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pre-Trna Accumulation","termid":"PBO:0002255"}


id: GO:0065001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pattern specification process in which the polarity of a body or organ axis is established and maintained.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"part_of","term_name":"axis specification","termid":"GO:0009798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of axis polarity","termid":"GO:0065001"}


id: PBO:0065583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine kinase 7 (inactive)","termid":"PBO:0065583"}


id: PBO:0027339
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutamate-cysteine_ligase_activity","termid":"PBO:0027339"}


id: GO:0021764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the amygdala over time from its initial formation until its mature state. The amygdala is an almond-shaped set of neurons in the medial temporal lobe of the brain that play a key role in processing emotions such as fear and pleasure.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GOC:cls","ISBN:0878937420","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"limbic system development","termid":"GO:0021761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amygdala development","termid":"GO:0021764"}


id: PBO:0034217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_concretized_as","termid":"PBO:0034217"}


id: GO:0048702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the neurocranium are generated and organized during the embryonic phase. The neurocranium is the portion of the vertebrate skull surrounding the brain.","definition_xrefs":["GOC:dsf","PMID:16049113","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic cranial skeleton morphogenesis","termid":"GO:0048701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic neurocranium morphogenesis","synonyms":[{"name":"embryonic braincase morphogenesis","type":"exact"},{"name":"embryonic chondrocranium morphogenesis","type":"exact"}],"termid":"GO:0048702"}


id: PBO:0066561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rh associated glycoprotein","termid":"PBO:0066561"}


id: GO:1902460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal stem cell proliferation.","definition_xrefs":["GOC:pm","GOC:TermGenie","PMID:18672106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stem cell proliferation","termid":"GO:0072091"},{"relation_name":"regulates","term_name":"mesenchymal stem cell proliferation","termid":"GO:0097168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal stem cell proliferation","synonyms":[{"name":"regulation of MSC proliferation","type":"exact"}],"termid":"GO:1902460"}


id: MONDO:0020776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the family CHLAMYDIACEAE.","definition_xrefs":["MESH:D002694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gram-negative bacterial infections","termid":"MONDO:0021678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chlamydiaceae infections","secondary_identifiers":["EFO:1001288","UMLS:C0008153","MEDGEN:3013"],"synonyms":[{"name":"Chlamydiaceae Infection","type":"related"},{"name":"Chlamydiaceae Infections","type":"related"},{"name":"Infection, Chlamydiaceae","type":"related"},{"name":"Infections, Chlamydiaceae","type":"related"}],"termid":"MONDO:0020776","xrefs":{"Monarch":{"xref_id":"0020776"}}}


id: SO:0000367
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region within an integron, adjacent to an integrase, at which site specific recombination involving an attC_site takes place.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integration_excision_site","termid":"SO:0000946"},{"relation_name":"part_of","term_name":"integron","termid":"SO:0000365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attI_site","synonyms":[{"name":"attI site","type":"exact"}],"termid":"SO:0000367"}


id: GO:0140173
data:
  {"annotated_genes":["SJAG_01205"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111295],"is_not":false,"summary":null,"term":"GO:0140173"}]},"cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H2A phosphorylated at serine 128.","definition_xrefs":["PMID:20679485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A reader activity","termid":"GO:0140054"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01205":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140566"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0003674","GO:0140566"],"is_obsolete":false,"name":"histone H2AS128phos reader activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140173","terms_by_termid":{"GO:0140173":null}}


id: PATO:0001060
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001060 absolute efficiency (obsolete PATO:0001060)","termid":"PATO:0001060"}


id: MONDO:0015415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete oblique facial cleft (obsolete MONDO:0015415)","secondary_identifiers":["Orphanet:141253"],"synonyms":[{"name":"Orbitofacial cleft","type":"exact"}],"termid":"MONDO:0015415","xrefs":{"Monarch":{"xref_id":"0015415"}}}


id: PBO:0036515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex (ER membrane insertion) subunit Get4 (predicted)","termid":"PBO:0036515"}


id: FYPO:0002589
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of zinc ions than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"resistance to zinc","synonyms":[{"name":"resistance to zinc during mitotic cell cycle","type":"related"},{"name":"resistance to zinc during vegetative growth","type":"exact"},{"name":"resistance to zinc ion","type":"exact"},{"name":"resistance to zinc ions","type":"exact"},{"name":"resistant to zinc","type":"exact"}],"termid":"FYPO:0002589"}


id: PBO:0062033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 2","termid":"PBO:0062033"}


id: GO:0002843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of tolerance induction to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peripheral tolerance induction","termid":"GO:0002658"},{"relation_name":"is_a","term_name":"regulation of immune response to tumor cell","termid":"GO:0002837"},{"relation_name":"regulates","term_name":"tolerance induction to tumor cell","termid":"GO:0002413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tolerance induction to tumor cell","synonyms":[{"name":"regulation of tolerance induction to tumour cell","type":"exact"}],"termid":"GO:0002843"}


id: PBO:0088450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WLM domain metallopeptidase implicated in DNA repair Wss1","termid":"PBO:0088450"}


id: PBO:0056498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 3 like 2B","termid":"PBO:0056498"}


id: PBO:0064218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C beta 3","termid":"PBO:0064218"}


id: MONDO:0009305
data:
  {"annotated_genes":["SJAG_02875"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87036],"is_not":false,"summary":null,"term":"MONDO:0009305"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02875":null},"genotype_count":0,"is_obsolete":false,"name":"granulocytopenia with immunoglobulin abnormality","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:233600","DOID:0111974","MESH:C565535","UMLS:C1856263","MEDGEN:383874"],"synonyms":[{"name":"granulocytopenia with immunoglobulin abnormality","type":"exact"},{"name":"immunodeficiency 59 and hypoglycemia","type":"exact"}],"termid":"MONDO:0009305","terms_by_termid":{"MONDO:0009305":null},"xrefs":{"Monarch":{"xref_id":"0009305"}}}


id: PBO:0086495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative phosphopyruvate hydratase","termid":"PBO:0086495"}


id: PBO:0047373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 4","termid":"PBO:0047373"}


id: PBO:0084755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial matrix iron chaperone; oxidizes and stores iron; interacts with Isu1p to promote Fe-S cluster assembly; mutation results in multiple Fe/S-dependent enzyme deficiencies; human frataxin homolog FXN is mutated in Friedrich's ataxia; human FTL gene can complement yeast yfh1 null mutant","termid":"PBO:0084755"}


id: FYPO:0006544
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a lower extent than normal during mitosis. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"decreased transcription during mitosis","synonyms":[{"name":"decreased transcription during cellular response to calcium ion during mitotic M phase","type":"related"},{"name":"decreased transcription during mitosis during vegetative growth","type":"exact"},{"name":"decreased transcription during mitotic nuclear division","type":"exact"},{"name":"reduced transcription during mitosis","type":"exact"}],"termid":"FYPO:0006544"}


id: MONDO:1040017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intestinal disorder characterized by an opening in the intestine to some epithelial surface.","definition_xrefs":["PMID:30480947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal fistula","secondary_identifiers":["UMLS:C0021833","MEDGEN:5862"],"termid":"MONDO:1040017","xrefs":{"Monarch":{"xref_id":"1040017"}}}


id: MONDO:0016330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of hypertrophic cardiomyopathy that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy","termid":"MONDO:0005045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"non-familial hypertrophic cardiomyopathy","secondary_identifiers":["UMLS:C5680883","Orphanet:217598","MEDGEN:1843178"],"synonyms":[{"name":"acquired hypertrophic cardiomyopathy","type":"exact"}],"termid":"MONDO:0016330","xrefs":{"Monarch":{"xref_id":"0016330"}}}


id: PBO:0000968
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.26.5","termid":"PBO:0000968"}


id: GO:1902762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of embryonic skeletal joint development.","definition_xrefs":["GOC:mr","GOC:TermGenie","GO_REF:0000058","PMID:16575901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"embryonic skeletal joint development","termid":"GO:0072498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of embryonic skeletal joint development","termid":"GO:1902762"}


id: PBO:0108540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Y like 1B","termid":"PBO:0108540"}


id: FYPO:0001115
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype in which the cellular response to P-factor is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to pheromone","termid":"FYPO:0001113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"normal cellular response to P-factor","termid":"FYPO:0001115"}


id: GO:0030289
data:
  {"annotated_genes":["SJAG_00823","SJAG_00369"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74388,109363],"is_not":false,"summary":null,"term":"GO:0030289"}]},"cv_name":"cellular_component","definition":"A protein serine/threonine phosphatase complex formed by the catalytic subunit of protein phosphatase 4 plus one or more regulatory subunits.","definition_xrefs":["PMID:10026142","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00369":null,"SJAG_00823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein phosphatase 4 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030289","terms_by_termid":{"GO:0030289":null}}


id: GO:0043181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of transporting a substance into, and confining within, a vacuole.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"vacuolar sequestering","synonyms":[{"name":"retention in vacuole","type":"exact"},{"name":"sequestering in vacuole","type":"exact"},{"name":"sequestration in vacuole","type":"exact"},{"name":"storage in vacuole","type":"exact"},{"name":"vacuolar retention","type":"exact"},{"name":"vacuolar sequestration","type":"exact"},{"name":"vacuolar storage","type":"exact"}],"termid":"GO:0043181"}


id: PBO:0043394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X9-C motif containing 1","termid":"PBO:0043394"}


id: GO:0016539
data:
  {"annotated_genes":["SJAG_01471"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68885],"is_not":false,"summary":null,"term":"GO:0016539"}]},"cv_name":"biological_process","definition":"The removal of an internal amino acid sequence (an intein) from a protein during protein maturation; the excision of inteins is precise and the N- and C-terminal exteins are joined by a normal peptide bond. Protein splicing involves 4 nucleophilic displacements by the 3 conserved splice junction residues.","definition_xrefs":["GOC:ma","PMID:16305544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein splicing","termid":"GO:0030908"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01471":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"intein-mediated protein splicing","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"intein","type":"related"}],"termid":"GO:0016539","terms_by_termid":{"GO:0016539":null}}


id: GO:0032274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a gonadotropin, any hormone that stimulates the gonads, especially follicle-stimulating hormone and luteinizing hormone.","definition_xrefs":["GOC:mah","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine hormone secretion","termid":"GO:0060986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"gonadotropin secretion","synonyms":[{"name":"gonadotrophin secretion","type":"exact"}],"termid":"GO:0032274"}


id: GO:0070504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a prosthetic group that contains selenium, as in the selenium-dependent molybdenum hydroxylases. The selenium atom in the prosthetic group is required for enzymatic function but is labile to a variety of treatments.","definition_xrefs":["GOC:mah","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prosthetic group biosynthetic process","termid":"GO:0051191"},{"relation_name":"is_a","term_name":"selenium-containing prosthetic group metabolic process","termid":"GO:0070503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"selenium-containing prosthetic group biosynthetic process","synonyms":[{"name":"selenium-containing prosthetic group anabolism","type":"exact"},{"name":"selenium-containing prosthetic group biosynthesis","type":"exact"},{"name":"selenium-containing prosthetic group formation","type":"exact"},{"name":"selenium-containing prosthetic group synthesis","type":"exact"}],"termid":"GO:0070504"}


id: MONDO:0011319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete activator of liver function 1 (obsolete MONDO:0011319)","secondary_identifiers":["OMIM:603416"],"synonyms":[{"name":"ALFN1","type":"related"},{"name":"Half1","type":"related"},{"name":"RPL21P1","type":"related"},{"name":"activator of liver function 1","type":"exact"},{"name":"activator of liver function type 1","type":"exact"},{"name":"ribosomal PROTEIN L21 pseudogene 1","type":"related"},{"name":"ribosomal Protein L21 pseudogene 1","type":"related"}],"termid":"MONDO:0011319","xrefs":{"Monarch":{"xref_id":"0011319"}}}


id: MONDO:0971094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyvalvular heart disease syndrome","termid":"MONDO:0016460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiac anomalies-short stature-joint hypermobility-facial dysmorphism syndrome due to TAB2 mutation","secondary_identifiers":["UMLS:C5925073","MEDGEN:1863549","Orphanet:664401"],"termid":"MONDO:0971094","xrefs":{"Monarch":{"xref_id":"0971094"}}}


id: PR:Q9HFF5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pds5 gene.","definition_xrefs":["UniProtKB:Q9HFF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sister chromatid cohesion protein pds5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC110.02","synonyms":[{"name":"Spom972h-pds5","type":"exact"},{"name":"precocious dissociation of sisters protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HFF5"}


id: PR:Q9UTC5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized protein YggC that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00205","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine kinase C227.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.14","secondary_identifiers":["UniProtKB:Q9UTC5"],"synonyms":[{"name":"Spom972h-yggC","type":"exact"}],"termid":"PR:Q9UTC5"}


id: PR:000049982
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein rad9 (Schizosaccharomyces pombe) that has been phosphorylated on residues equivalent to Thr-412 and Ser-423 of the amino acid sequence represented by UniProtKB:P26306. Example: UniProtKB:P26306, Thr-412/Ser-423, MOD:00046.","definition_xrefs":["PMID:21561865","PomBase:MAH","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair protein rad9 (Schizosaccharomyces pombe)","termid":"PR:000044575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rad9/Phos(T412,S423)","pombase_gene_id":"SPAC664.07c","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA repair protein rad9 phosphorylated 3 (Schizosaccharomyces pombe)","type":"exact"},{"name":"rad9/Phos(T412,S423)","type":"exact"}],"termid":"PR:000049982"}


id: PBO:0048912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member G","termid":"PBO:0048912"}


id: GO:0034297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which oidia, a type of asexual spore found in fungi, are formed. Oidia are borne a few at a time on very simple hyphae that protrude a short distance into the substrate, and are usually presumed not to constitute the main reproductive strategy of the fungus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation","termid":"GO:0030436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oidium formation","termid":"GO:0034297"}


id: GO:0060577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the pulmonary venous blood vessels are generated and organized. Pulmonary veins are blood vessels that transport blood from the lungs to the heart.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venous blood vessel morphogenesis","termid":"GO:0048845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pulmonary vein morphogenesis","synonyms":[{"name":"pulmonary venous blood vessel morphogenesis","type":"related"}],"termid":"GO:0060577"}


id: PBO:0029057
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuole","termid":"PBO:0029057"}


id: PBO:0052317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1143 pseudogene 1","termid":"PBO:0052317"}


id: GO:0047887
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate + ATP = 2-trans,6-trans-farnesyl triphosphate + ADP.","definition_xrefs":["RHEA:21544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"farnesyl diphosphate kinase activity","secondary_identifiers":["KEGG_REACTION:R02303","MetaCyc:FARNESYL-DIPHOSPHATE-KINASE-RXN","EC:2.7.4.18"],"synonyms":[{"name":"ATP:farnesyl-diphosphate phosphotransferase activity","type":"related"},{"name":"farnesyl pyrophosphate kinase activity","type":"related"},{"name":"farnesyl-diphosphate kinase activity","type":"exact"}],"termid":"GO:0047887"}


id: MONDO:0044700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"SIN3A-related intellectual disability syndrome","termid":"MONDO:0044699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002320"],"is_obsolete":false,"name":"SIN3A-related intellectual disability syndrome due to a point mutation","secondary_identifiers":["MEDGEN:934771","GARD:17925","Orphanet:500166","UMLS:C4310804"],"termid":"MONDO:0044700","xrefs":{"Monarch":{"xref_id":"0044700"}}}


id: FYPO:0004003
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which replication fork processing begins later than normal. Replication fork processing is process in which a DNA replication fork that has stalled (due to DNA damage, DNA secondary structure, bound proteins, dNTP shortage, or other causes) is repaired and replication is restarted.","definition_xrefs":["PomBase:mah","GO:0031297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000293","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of replication fork processing","synonyms":[{"name":"delayed onset of collapsed replication fork processing","type":"exact"},{"name":"delayed onset of recovery from replication fork arrest","type":"exact"},{"name":"delayed onset of recovery from replication fork stalling","type":"exact"},{"name":"delayed onset of replication fork processing during mitotic cell cycle","type":"related"},{"name":"delayed onset of replication fork processing during vegetative growth","type":"exact"},{"name":"delayed onset of replication fork restart","type":"related"},{"name":"delayed onset of replication restart","type":"related"},{"name":"delayed replication fork processing","type":"exact"}],"termid":"FYPO:0004003"}


id: GO:0047234
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 raffinose = sucrose + 1F-alpha-D-galactosylraffinose.","definition_xrefs":["EC:2.4.1.166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"raffinose-raffinose alpha-galactotransferase activity","secondary_identifiers":["RHEA:14125","MetaCyc:RXN-11490"],"synonyms":[{"name":"raffinose (raffinose donor) galactosyltransferase activity","type":"related"},{"name":"raffinose-raffinose a-galactosyltransferase activity","type":"exact"},{"name":"raffinose-raffinose alpha-galactosyltransferase activity","type":"exact"},{"name":"raffinose:raffinose alpha-D-galactosyltransferase activity","type":"related"},{"name":"raffinose:raffinose alpha-galactosyltransferase activity","type":"related"}],"termid":"GO:0047234"}


id: GO:0019901
data:
  {"annotated_genes":["SJAG_06592","SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043424"},{"annotations":[72730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034236"}]},"cv_name":"molecular_function","definition":"Binding to a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase binding","termid":"GO:0019900"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"protein kinase binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0019901","terms_by_termid":{"GO:0034236":null,"GO:0043424":null}}


id: GO:0034653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of retinoic acid, one of the three components that makes up vitamin A.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid catabolic process","termid":"GO:0016103"},{"relation_name":"is_a","term_name":"fat-soluble vitamin catabolic process","termid":"GO:0042363"},{"relation_name":"is_a","term_name":"retinoic acid metabolic process","termid":"GO:0042573"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"retinoic acid catabolic process","synonyms":[{"name":"retinoic acid breakdown","type":"exact"},{"name":"retinoic acid catabolism","type":"exact"},{"name":"retinoic acid degradation","type":"exact"},{"name":"vitamin A1 acid catabolic process","type":"exact"}],"termid":"GO:0034653"}


id: MONDO:0012607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited susceptibility to asthma in which the cause of the disease is a mutation in the IRAK3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to asthma","termid":"MONDO:0010940"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma-related traits, susceptibility to, 5","secondary_identifiers":["OMIM:611064","UMLS:C1970224","MEDGEN:370858"],"synonyms":[{"name":"ASRT5","type":"related"},{"name":"IRAK3 inherited susceptibility to asthma","type":"exact"},{"name":"asthma susceptibility 5","type":"exact"},{"name":"asthma-related traits, susceptibility to, 5","type":"exact"},{"name":"asthma-related traits, susceptibility to, type 5","type":"exact"},{"name":"inherited susceptibility to asthma caused by mutation in IRAK3","type":"exact"}],"termid":"MONDO:0012607","xrefs":{"Monarch":{"xref_id":"0012607"}}}


id: PBO:0086983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of trehalose-6-phosphate synthase/phosphatase; involved in synthesis of storage carbohydrate trehalose; expression is induced by stress conditions and repressed by the Ras-cAMP pathway; TPS3 has a paralog, TSL1, that arose from the whole genome duplication","termid":"PBO:0086983"}


id: PR:O94700
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An endothelial differentiation-related factor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10245:SF1","OMA:SCHPO02913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiprotein-bridging factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.17","secondary_identifiers":["UniProtKB:O94700"],"synonyms":[{"name":"Spom972h-EDF1","type":"exact"}],"termid":"PR:O94700"}


id: PBO:0060732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFAF2 pseudogene 1","termid":"PBO:0060732"}


id: MOD:00251
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-serine residue and the 5'-end of DNA through a phosphodiester bond to form O-(phospho-5'-DNA)-L-serine.","definition_xrefs":["PubMed:7142163","PubMed:7265205","RESID:AA0246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleic acid linked residue","termid":"MOD:00750"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(phospho-5'-DNA)-L-serine","synonyms":[{"name":"(S)-2-amino-3-(5'-deoxyribonucleic acid phosphonoxy)propanoic acid","type":"exact"},{"name":"ACT_SITE O-(5'-phospho-DNA)-serine intermediate","type":"exact"},{"name":"MOD_RES O-(5'-phospho-DNA)-serine","type":"exact"},{"name":"O-(phospho-5'-DNA)-L-serine","type":"exact"},{"name":"O3-(phospho-5'-DNA)-L-serine","type":"exact"},{"name":"O3-L-serine 5'-DNA phosphodiester","type":"exact"}],"termid":"MOD:00251"}


id: GO:0015930
data:
  {"annotated_genes":["SJAG_04054"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016040"}]},"cv_name":"molecular_function","definition":"Catalysis of the formation of L-glutamine and 2-oxoglutarate from L-glutamate, using NADH, NADPH or ferredoxin as hydrogen acceptors.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04054":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glutamate synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0015930","terms_by_termid":{"GO:0016040":null}}


id: FYPO:0008029
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121349],"is_not":false,"summary":null,"term":"FYPO:0008029"}]},"cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed during fungal hyphal growth phase in which a cell lyses, i.e. the plasma membrane ruptures and cytoplasm is lost.","definition_xrefs":["PMID:36058798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell lysis","termid":"FYPO:0002488"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"cell lysis during hyphal growth phase","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"termid":"FYPO:0008029","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0008029":null}}


id: GO:2000537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of B cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte chemotaxis","termid":"GO:1901623"},{"relation_name":"regulates","term_name":"B cell chemotaxis","termid":"GO:0035754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B cell chemotaxis","termid":"GO:2000537"}


