# terms

id: FYPO:0004235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype in which RNA levels vary over the course of the mitotic cell cycle normally (i.e. levels are indistinguishable from wild type at any assayed point). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah","PMID:21118960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"gene expression regulation phenotype during vegetative growth","termid":"FYPO:0001333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal RNA level oscillation during mitotic cell cycle","synonyms":[{"name":"normal RNA level fluctuation during mitotic cell cycle","type":"exact"},{"name":"normal periodic expression of RNA during mitotic cell cycle","type":"exact"},{"name":"normal transcript level oscillation during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0004235"}


id: MONDO:0016610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acquired idiopathic inflammatory myopathy","termid":"MONDO:0020122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"idiopathic eosinophilic myositis","secondary_identifiers":["UMLS:C4755301","GARD:20664","Orphanet:247724","MEDGEN:1659844"],"synonyms":[{"name":"idiopathic eosinophilia-associated myopathy","type":"exact"}],"termid":"MONDO:0016610","xrefs":{"Monarch":{"xref_id":"0016610"}}}


id: PBO:0083328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORFs SPT5/YML010W and YML009W-B","termid":"PBO:0083328"}


id: GO:0002532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of any molecular mediator of the inflammatory response following an inflammatory stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:dph","ISBN:0781735149","GOC:add","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"inflammatory response","termid":"GO:0006954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"production of molecular mediator involved in inflammatory response","synonyms":[{"name":"production of cellular mediator of acute inflammation","type":"related"},{"name":"production of molecular mediator involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002532"}


id: PBO:0046958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM78B antisense RNA 1","termid":"PBO:0046958"}


id: PBO:0003521
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. Pombe YPD1-like protein","termid":"PBO:0003521"}


id: PBO:0041128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 9","termid":"PBO:0041128"}


id: GO:1900245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of MDA-5 signaling pathway.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"regulation of MDA-5 signaling pathway","termid":"GO:0039533"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"MDA-5 signaling pathway","termid":"GO:0039530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of MDA-5 signaling pathway","synonyms":[{"name":"activation of IFIH1 signaling pathway","type":"narrow"},{"name":"activation of MDA-5 signaling pathway","type":"narrow"},{"name":"activation of MDA5 signaling pathway","type":"narrow"},{"name":"activation of melanoma differentiation-associated gene 5 signaling pathway","type":"narrow"},{"name":"positive regulation of IFIH1 signaling pathway","type":"exact"},{"name":"positive regulation of MDA-5 signalling pathway","type":"exact"},{"name":"positive regulation of MDA5 signaling pathway","type":"narrow"},{"name":"positive regulation of melanoma differentiation-associated gene 5 signaling pathway","type":"exact"},{"name":"up regulation of IFIH1 signaling pathway","type":"exact"},{"name":"up regulation of MDA-5 signaling pathway","type":"exact"},{"name":"up regulation of MDA5 signaling pathway","type":"narrow"},{"name":"up regulation of melanoma differentiation-associated gene 5 signaling pathway","type":"exact"},{"name":"up-regulation of IFIH1 signaling pathway","type":"exact"},{"name":"up-regulation of MDA-5 signaling pathway","type":"exact"},{"name":"up-regulation of MDA5 signaling pathway","type":"narrow"},{"name":"up-regulation of melanoma differentiation-associated gene 5 signaling pathway","type":"exact"},{"name":"upregulation of IFIH1 signaling pathway","type":"exact"},{"name":"upregulation of MDA-5 signaling pathway","type":"exact"},{"name":"upregulation of MDA5 signaling pathway","type":"narrow"},{"name":"upregulation of melanoma differentiation-associated gene 5 signaling pathway","type":"exact"}],"termid":"GO:1900245"}


id: PATO:0001936
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spheroid quality inhering in a bearer by virtue of the bearer's being egg-shaped and flat, with the narrow end attached to the base.","definition_xrefs":["wordreference:wordreference"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovate","termid":"PATO:0001891"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obovate","synonyms":[{"name":"obovoid","type":"related"}],"termid":"PATO:0001936"}


id: MONDO:0859245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia, autosomal recessive 32","secondary_identifiers":["DOID:0070413","UMLS:C5676978","MEDGEN:1802496","OMIM:619862"],"termid":"MONDO:0859245","xrefs":{"Monarch":{"xref_id":"0859245"}}}


id: PBO:0054295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1686","termid":"PBO:0054295"}


id: GO:1990261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the unspliced pre-mRNA (pre-messenger RNA).","definition_xrefs":["PMID:22844259","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pre-mRNA catabolic process","synonyms":[{"name":"pre-mRNA decay","type":"exact"},{"name":"unspliced RNA decay","type":"exact"}],"termid":"GO:1990261"}


id: PATO:0002486
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a process by virtue of that process having two or more organisms as participants.","definition_xrefs":["PATOC:DS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multi-organismal process quality","termid":"PATO:0002486"}


id: PBO:0076784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tectonin beta-propeller repeat containing 2","termid":"PBO:0076784"}


id: PBO:0061903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid receptor mu 1","termid":"PBO:0061903"}


id: PBO:0004291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrillarin","termid":"PBO:0004291"}


id: GO:0090073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of protein homodimerization activity (obsolete GO:0090073)","termid":"GO:0090073"}


id: PBO:0048940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GORAB antisense RNA 1","termid":"PBO:0048940"}


id: PBO:0031579
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_silencing_at_centromere_central_core","termid":"PBO:0031579"}


id: GO:0044512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of glucagon-like peptide receptor 1 activity in of the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in modulation of glucagon-like peptide receptor 1 activity in another organism (obsolete GO:0044512)","synonyms":[{"name":"envenomation resulting in modulation of glucagon-like peptide receptor 1 activity in other organism","type":"exact"}],"termid":"GO:0044512"}


id: GO:0009679
data:
  {"annotated_genes":["SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[119223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: hexose(out) + H+(out) = hexose(in) + H+(in).","definition_xrefs":["TC:2.A.1.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:proton symporter activity","termid":"GO:0005351"},{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"hexose:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hexose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0009679","terms_by_termid":{"GO:0005358":null}}


id: GO:0031156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sorocarp development. An example of this process is found in Dictyostelium discoideum.","definition_xrefs":["GOC:mah","GOC:mtg_sensu","PMID:4332228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"sorocarp development","termid":"GO:0030587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sorocarp development","synonyms":[{"name":"regulation of fruiting body development","type":"broad"},{"name":"regulation of fruiting body formation","type":"broad"}],"termid":"GO:0031156"}


id: MONDO:1010156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly, non-human animal","secondary_identifiers":["OMIA:000146"],"termid":"MONDO:1010156","xrefs":{"Monarch":{"xref_id":"1010156"}}}


id: PBO:0064273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RhoGEF domain containing G6","termid":"PBO:0064273"}


id: PBO:0113490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor at START; binds to SBF (Swi4p-Swi6p) at SCB promoter elements in G1 to repress transcription; START inhibitor that retains Cdc28-Cln3 at the ER; acts with Ydj1p to promote release of the complex in a growth-mediated positive feedback loop to trigger START; unstable and degraded by SCF-Grr1 after phosphorylation; contains a G1/S transcription factor binding (GTB) motif; binds SBF-regulated promoters in HU-treated cells; substrate of Cdc28p and Pho85p; hyperphosphorylated","termid":"PBO:0113490"}


id: FYPO:0001672
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a GTPase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal GTPase activity","termid":"FYPO:0001672"}


id: GO:0036088
data:
  {"annotated_genes":["SJAG_04827"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80733],"is_not":false,"summary":null,"term":"GO:0036088"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-serine, the D-enantiomer of serine, i.e. (2S)-2-amino-3-hydroxypropanoic acid.","definition_xrefs":["GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-amino acid catabolic process","termid":"GO:0019478"},{"relation_name":"is_a","term_name":"D-serine metabolic process","termid":"GO:0070178"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"D-serine catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"D-serine breakdown","type":"exact"},{"name":"D-serine catabolism","type":"exact"},{"name":"D-serine degradation","type":"exact"}],"termid":"GO:0036088","terms_by_termid":{"GO:0036088":null}}


id: GO:1990612
data:
  {"annotated_genes":["SJAG_05196","SJAG_01538"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98627,104750],"is_not":false,"summary":null,"term":"GO:1990612"}]},"cv_name":"cellular_component","definition":"A LINC complex implicated in the connection of DNA double strand breaks to the cytoskeleton during DNA double-strand break repair.","definition_xrefs":["PMID:24943839","PMID:24947240","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic nuclear membrane microtubule tethering complex","termid":"GO:0034993"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01538":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Sad1-Kms1 LINC complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990612","terms_by_termid":{"GO:1990612":null}}


id: MONDO:0005997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing or stricture of the tricuspid orifice of the heart.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricuspid valve disorder","termid":"MONDO:0000471"},{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"tricuspid valve stenosis","secondary_identifiers":["MEDGEN:21678","EFO:0007525","HP:0010446","NCIT:C50783","DOID:4078","MESH:D014264","SCTID:49915006","UMLS:C0040963","NANDO:2200300","icd11.foundation:442626161"],"synonyms":[{"name":"tricuspid stenosis","type":"exact"}],"termid":"MONDO:0005997","xrefs":{"Monarch":{"xref_id":"0005997"}}}


id: SO:0000917
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to insert a U.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000917 insert_U (obsolete SO:0000917)","synonyms":[{"name":"insert U","type":"exact"}],"termid":"SO:0000917"}


id: PBO:0072675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTRAF pseudogene 2","termid":"PBO:0072675"}


id: PBO:0017780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial S-adenosylmethionine transmembrane transporter (predicted)","termid":"PBO:0017780"}


id: PBO:0049497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 4","termid":"PBO:0049497"}


id: MONDO:0007606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fibrodysplasia ossificans progressiva (FOP) is a severely disabling heritable disorder of connective tissue characterized by congenital malformations of the great toes and progressive heterotopic ossification that forms qualitatively normal bone in characteristic extraskeletal sites.","definition_xrefs":["Orphanet:337"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with progressive ossification of skin, skeletal muscle, fascia, tendons and ligaments (obsolete MONDO:0018231)","termid":"MONDO:0018231"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrodysplasia ossificans progressiva","secondary_identifiers":["OMIM:135100","SCTID:82725007","NCIT:C3040","ICD9:728.11","MedDRA:10068715","UMLS:C0016037","MEDGEN:4698","GARD:6445","icd11.foundation:2102976705","MESH:D009221","NANDO:1200871","NORD:1143","DOID:13374","NANDO:2201020"],"synonyms":[{"name":"FOP","type":"exact"},{"name":"Stone Man syndrome","type":"exact"},{"name":"Stone man syndrome","type":"exact"},{"name":"fibrodysplasia ossificans progressiva","type":"exact"},{"name":"fop","type":"exact"},{"name":"myositis ossificans progressiva","type":"related"},{"name":"progressive myositis ossificans","type":"exact"},{"name":"progressive ossifying myositis","type":"exact"}],"termid":"MONDO:0007606","xrefs":{"Monarch":{"xref_id":"0007606"}}}


id: GO:0003068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by acetylcholine signaling. Acetylcholine is an acetic acid ester of the organic base choline and functions as a neurotransmitter.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by neurotransmitter","termid":"GO:0003070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by acetylcholine","synonyms":[{"name":"blood pressure regulation by acetylcholine","type":"exact"}],"termid":"GO:0003068"}


id: GO:0050400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + xylitol = ADP + 2 H+ + xylitol 5-phosphate.","definition_xrefs":["EC:2.7.1.122","RHEA:20209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"xylitol kinase activity","secondary_identifiers":["KEGG_REACTION:R02136","MetaCyc:XYLITOL-KINASE-RXN"],"synonyms":[{"name":"ATP:xylitol 5-phosphotransferase activity","type":"related"},{"name":"xylitol phosphotransferase activity","type":"related"}],"termid":"GO:0050400"}


id: PBO:0079894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase complex assembly factor 3","termid":"PBO:0079894"}


id: PBO:0042757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEP19 pseudogene 1","termid":"PBO:0042757"}


id: PATO:0001773
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having only one phase or stage.","definition_xrefs":["hefreedictionary.com:hefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phase","termid":"PATO:0000083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monophasic","termid":"PATO:0001773"}


id: GO:0060569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of peptide hormone processing. Peptide hormone processing is the generation of a mature peptide hormone by posttranslational processing of a prohormone.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein processing","termid":"GO:0010954"},{"relation_name":"is_a","term_name":"positive regulation of hormone metabolic process","termid":"GO:0032352"},{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"regulation of peptide hormone processing","termid":"GO:0060568"},{"relation_name":"positively_regulates","term_name":"peptide hormone processing","termid":"GO:0016486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"positive regulation of peptide hormone processing","termid":"GO:0060569"}


id: MONDO:0100389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly Trisomy 8. (A chromosomal abnormality consisting of the presence of a third copy of chromosome 8 in somatic cells.)","definition_xrefs":["NCIT:C36396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia, Trisomy 8","secondary_identifiers":["NCIT:C162775"],"synonyms":[{"name":"AML, Trisomy 8","type":"exact"},{"name":"AML, tri8","type":"exact"}],"termid":"MONDO:0100389","xrefs":{"Monarch":{"xref_id":"0100389"}}}


id: MONDO:0000919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the ampulla of Vater.","definition_xrefs":["NCIT:C3536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duodenum cancer","termid":"MONDO:0000920"},{"relation_name":"is_a","term_name":"ampulla of vater neoplasm","termid":"MONDO:0000921"},{"relation_name":"is_a","term_name":"malignant tumor of extrahepatic bile duct","termid":"MONDO:0021321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"ampulla of vater cancer","secondary_identifiers":["UMLS:C0153454","DOID:10020","MEDGEN:57785","ICD9:156.2","SCTID:363417006"],"synonyms":[{"name":"cancer of hepatopancreatic ampulla","type":"exact"},{"name":"hepatopancreatic ampulla cancer","type":"exact"},{"name":"malignant ampulla of Vater neoplasm","type":"exact"},{"name":"malignant ampulla of Vater tumor","type":"exact"},{"name":"malignant ampulla of Vater tumour","type":"exact"},{"name":"malignant hepatopancreatic ampulla neoplasm","type":"exact"},{"name":"malignant neoplasm of ampulla of Vater","type":"exact"},{"name":"malignant neoplasm of hepatopancreatic ampulla","type":"exact"},{"name":"malignant neoplasm of the ampulla of Vater","type":"exact"},{"name":"malignant tumor of ampulla of Vater","type":"exact"},{"name":"malignant tumor of ampulla of vater","type":"exact"},{"name":"malignant tumor of the ampulla of Vater","type":"exact"},{"name":"malignant tumour of ampulla of Vater","type":"exact"},{"name":"malignant tumour of ampulla of vater","type":"exact"},{"name":"malignant tumour of the ampulla of Vater","type":"exact"}],"termid":"MONDO:0000919","xrefs":{"Monarch":{"xref_id":"0000919"}}}


id: PBO:0071604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 21","termid":"PBO:0071604"}


id: MONDO:1012163
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"micromelia, non-human animal","termid":"MONDO:1011765"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"micromelia, ducks","secondary_identifiers":["OMIA:000648-8835"],"termid":"MONDO:1012163","xrefs":{"Monarch":{"xref_id":"1012163"}}}


id: PBO:0060616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neutrophil cytosolic factor 1C pseudogene","termid":"PBO:0060616"}


id: MONDO:0013462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 6 deficiency","secondary_identifiers":["OMIM:613852","UMLS:C3151219","MEDGEN:462569"],"synonyms":[{"name":"fucosyltransferase 6 deficiency","type":"exact"}],"termid":"MONDO:0013462","xrefs":{"Monarch":{"xref_id":"0013462"}}}


id: MONDO:0002362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-invasive papillary serous epithelial neoplasm usually arising from the ovary.","definition_xrefs":["NCIT:C4181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papilloma","termid":"MONDO:0002363"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serous surface papilloma","secondary_identifiers":["MEDGEN:90770","DOID:2614","ICDO:8461/0","UMLS:C0334360"],"synonyms":[{"name":"serous surface papilloma","type":"exact"},{"name":"serous surface papilloma (morphologic abnormality)","type":"exact"},{"name":"serous surface papilloma NOS (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0002362","xrefs":{"Monarch":{"xref_id":"0002362"}}}


id: PBO:0002513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroorotase Ura2 (predicted)","termid":"PBO:0002513"}


id: PBO:0005413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial heat shock protein Hsp10 (predicted)","termid":"PBO:0005413"}


id: GO:0006958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement activation","termid":"GO:0006956"},{"relation_name":"part_of","term_name":"humoral immune response mediated by circulating immunoglobulin","termid":"GO:0002455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"complement activation, classical pathway","secondary_identifiers":["Reactome:R-HSA-173623"],"synonyms":[{"name":"complement cascade, classical pathway","type":"exact"}],"termid":"GO:0006958"}


id: GO:0047834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a D-threo-aldose + NAD+ = a D-threo-aldono-1,5-lactone + NADH.","definition_xrefs":["MetaCyc:D-THREO-ALDOSE-1-DEHYDROGENASE-RXN","EC:1.1.1.122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D-threo-aldose 1-dehydrogenase activity","secondary_identifiers":["RHEA:19645"],"synonyms":[{"name":"(2S,3R)-aldose dehydrogenase activity","type":"related"},{"name":"D-threo-aldose:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"L-fucose (D-arabinose) dehydrogenase activity","type":"related"},{"name":"L-fucose dehydrogenase activity","type":"related"},{"name":"dehydrogenase, L-fucose","type":"related"}],"termid":"GO:0047834"}


id: PR:Q9C113
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F8.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F8.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.08","synonyms":[{"name":"Spom972h-SPAC1F8.08","type":"exact"}],"termid":"PR:Q9C113"}


id: PR:O74354
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An acidic repeat-containing protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03821","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein dnt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25D12.02c","secondary_identifiers":["UniProtKB:O74354"],"synonyms":[{"name":"Spom972h-ACRC","type":"exact"}],"termid":"PR:O74354"}


id: GO:0046411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which 2-keto-3-deoxygluconate is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"monosaccharide transmembrane transport","termid":"GO:0015749"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"2-keto-3-deoxygluconate transmembrane transport","synonyms":[{"name":"2-keto-3-deoxygluconate transport","type":"related"}],"termid":"GO:0046411"}


id: PBO:0090086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal ubiquitin-protein ligase E3 Pex12","termid":"PBO:0090086"}


id: PR:O74906
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC613.07 gene.","definition_xrefs":["UniProtKB:O74906","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box C/D snoRNA protein SPCC613.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.07","synonyms":[{"name":"Spom972h-SPCC613.07","type":"exact"}],"termid":"PR:O74906"}


id: GO:0097041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phenolic phthiocerol, a phthiocerol derivative having a 4-hydroxyphenyl substituent at the 29-position.","definition_xrefs":["GOC:ecd","PMID:9201977","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phenolic phthiocerol biosynthetic process","synonyms":[{"name":"phenolic phthiocerol anabolism","type":"exact"},{"name":"phenolic phthiocerol biosynthesis","type":"exact"},{"name":"phenolic phthiocerol formation","type":"exact"},{"name":"phenolic phthiocerol synthesis","type":"exact"},{"name":"phenolphthiocerol biosynthesis","type":"exact"}],"termid":"GO:0097041"}


id: MONDO:0020200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete conjunctival hemangioma or hemolymphangioma (obsolete MONDO:0020200)","secondary_identifiers":["Orphanet:98612"],"termid":"MONDO:0020200","xrefs":{"Monarch":{"xref_id":"0020200"}}}


id: GO:0052750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: reactive black 5 + hydrogen peroxide = oxidized reactive black 5 + 2 H2O.","definition_xrefs":["KEGG_REACTION:R07612","MetaCyc:RXN-8666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"reactive-black-5:hydrogen-peroxide oxidoreductase activity","secondary_identifiers":["EC:1.11.1.16","RHEA:22396"],"synonyms":[{"name":"versatile peroxidase activity","type":"broad"}],"termid":"GO:0052750"}


id: GO:1901802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1,5-anhydro-D-fructose.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:15716041","UniPathway:UPA00738","MetaCyc:PWY-6992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"},{"relation_name":"is_a","term_name":"monosaccharide catabolic process","termid":"GO:0046365"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"1,5-anhydro-D-fructose metabolic process","termid":"GO:1901801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"1,5-anhydro-D-fructose catabolic process","synonyms":[{"name":"1,5-anhydro-D-fructose breakdown","type":"exact"},{"name":"1,5-anhydro-D-fructose catabolism","type":"exact"},{"name":"1,5-anhydro-D-fructose degradation","type":"exact"}],"termid":"GO:1901802"}


id: SO:0100014
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The amino-terminal positively-charged region of a signal peptide (approx 1-5 aa).","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"},{"relation_name":"part_of","term_name":"signal_peptide","termid":"SO:0000418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"n_terminal_region","synonyms":[{"name":"N-region","type":"related"}],"termid":"SO:0100014"}


id: MONDO:0008602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride storage disease","termid":"MONDO:0000155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"triglyceride storage disease, type 2","secondary_identifiers":["UMLS:C1860820","MEDGEN:349896","OMIM:190430","MESH:C566030"],"synonyms":[{"name":"triglyceride storage disease, type II","type":"related"}],"termid":"MONDO:0008602","xrefs":{"Monarch":{"xref_id":"0008602"}}}


id: MONDO:0015902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Major hypertriglyceridemia comprises a group of endocrine diseases characterized by permanently high levels of triglycerides (TG) in the blood (higher than 4g/L after 12 hours of fasting) and an increased risk of acute pancreatitis, making screening essential.","definition_xrefs":["Orphanet:181425"],"gene_count":0,"genotype_count":0,"name":"obsolete major hypertriglyceridemia (obsolete MONDO:0015902)","termid":"MONDO:0015902","xrefs":{"Monarch":{"xref_id":"0015902"}}}


id: PBO:0069858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1145, pseudogene","termid":"PBO:0069858"}


id: FYPO:0003792
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which generation of double-strand breaks at defined hotspots throughout the genome during meiosis I is increased at the silent mating-type cassettes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination at silent mating-type cassette","termid":"FYPO:0003346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased meiotic DNA double-strand break formation at silent mating-type cassette","synonyms":[{"name":"increased meiotic DNA double-strand break formation at mating-type region heterochromatin","type":"exact"}],"termid":"FYPO:0003792"}


id: MONDO:0003170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An astrocytic tumor affecting young people. Morphologically, it is characterized by the presence of collagenous tissue surrounding neoplastic astrocytes. In some cases the collagen is produced by the tumor cells (desmoplastic astrocytoma), whereas in others it is produced by mesenchymal cells (mixed glioma/fibroma).","definition_xrefs":["NCIT:C5419"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"astrocytoma (excluding glioblastoma)","termid":"MONDO:0019781"},{"relation_name":"is_a","term_name":"astrocytic tumor","termid":"MONDO:0021636"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gliofibroma","secondary_identifiers":["UMLS:C1266178","DOID:4856","ICDO:9442/1","MEDGEN:226850"],"synonyms":[{"name":"gliofibroma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003170","xrefs":{"Monarch":{"xref_id":"0003170"}}}


id: PBO:0004692
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.25","termid":"PBO:0004692"}


id: RO:0002552
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p results in the end of s if p results in a change of state in s whereby s either ceases to exist, or s becomes functionally impaired or s has its fate committed such that it is put on a path to be degraded.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_ending_of","termid":"RO:0002552"}


id: GO:0009822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alkaloids, nitrogen containing natural products not otherwise classified as peptides, nonprotein amino acids, amines, cyanogenic glycosides, glucosinolates, cofactors, phytohormones or primary metabolites (such as purine or pyrimidine bases).","definition_xrefs":["ISBN:0122146743","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"alkaloid metabolic process","termid":"GO:0009820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkaloid catabolic process","synonyms":[{"name":"alkaloid breakdown","type":"exact"},{"name":"alkaloid catabolism","type":"exact"},{"name":"alkaloid degradation","type":"exact"}],"termid":"GO:0009822"}


id: PBO:0079621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 L6","termid":"PBO:0079621"}


id: PBO:0083592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF Q0017","termid":"PBO:0083592"}


id: MONDO:0015974
data:
  {"annotated_genes":["SJAG_04199","SJAG_02527","SJAG_02038","SJAG_00677","SJAG_05024"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012650"},{"annotations":[88923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011686"},{"annotations":[87471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009973"},{"annotations":[87724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014168"},{"annotations":[88281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014391"}]},"cv_name":"mondo","definition":"Severe combined immunodeficiency (SCID) comprises a group of rare monogenic primary immunodeficiency disorders characterized by a lack of functional peripheral T lymphocytes resulting in early-onset severe respiratory infections and failure to thrive. They are classified according to immunological phenotype into SCID with absence of T cells but presence of B cells (T-B+ SCID) or SCID with absence of both (T-B- SCID). Both of these groups include several forms, with or without natural killer (NK) cells.","definition_xrefs":["Orphanet:183660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00677":null,"SJAG_02038":null,"SJAG_02527":null,"SJAG_04199":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"severe combined immunodeficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1706","DOID:627","HP:0004430","NCIT:C3472","MEDGEN:88328","MESH:D016511","MedDRA:10069566","UMLS:C0085110","SCTID:31323000","GARD:7628","icd11.foundation:963193284"],"synonyms":[{"name":"SCID","type":"exact"},{"name":"combined T and B cell inborn immunodeficiency","type":"exact"},{"name":"severe combined immunodeficiency","type":"exact"},{"name":"severe combined immunodeficiency (disease)","type":"exact"},{"name":"severe combined immunodeficiency disease","type":"exact"}],"termid":"MONDO:0015974","terms_by_termid":{"MONDO:0009973":null,"MONDO:0011686":null,"MONDO:0012650":null,"MONDO:0014168":null,"MONDO:0014391":null},"xrefs":{"Monarch":{"xref_id":"0015974"}}}


id: GO:0005815
data:
  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id: MONDO:0019738
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic uremic syndrome, atypical, susceptibility to, 1","termid":"MONDO:0009335"},{"relation_name":"is_a","term_name":"atypical hemolytic-uremic syndrome","termid":"MONDO:0016244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"atypical hemolytic-uremic syndrome with H factor anomaly","secondary_identifiers":["Orphanet:93579"],"synonyms":[{"name":"D-HUS with H factor anomaly","type":"exact"},{"name":"aHUS with H factor anomaly","type":"exact"},{"name":"atypical HUS with H factor anomaly","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhea with H factor anomaly","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhoea with H factor anomaly","type":"exact"}],"termid":"MONDO:0019738","xrefs":{"Monarch":{"xref_id":"0019738"}}}


id: MONDO:1010541
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Meckel diverticulum that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Meckel diverticulum, non-human animal","termid":"MONDO:1010041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meckel diverticulum, horse","secondary_identifiers":["OMIA:001217-9796"],"termid":"MONDO:1010541","xrefs":{"Monarch":{"xref_id":"1010541"}}}


id: GO:1990824
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that depends on magnesium in order for one or more of its components to remain a part of the complex.","definition_xrefs":["PMID:10220587"],"gene_count":0,"genotype_count":0,"name":"obsolete magnesium-dependent protein complex (obsolete GO:1990824)","termid":"GO:1990824"}


id: MONDO:0001195
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of tick-borne disease which presents on the skin caused by bacteria of the genus Rickettsia.","definition_xrefs":["Wikipedia:Spotted_fever"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rickettsiaceae infectious disease","termid":"MONDO:0006927"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spotted fever","secondary_identifiers":["icd11.foundation:9953620","EFO:1002047","ICD9:082.0","ICD9:083.8","Orphanet:102022","UMLS:C5680374","SCTID:186771002","MEDGEN:1826170","GARD:19828","DOID:11104","ICD10CM:A77"],"synonyms":[{"name":"fever, spotted","type":"related"},{"name":"fevers, spotted","type":"related"},{"name":"spotted fever","type":"exact"},{"name":"spotted fever Group Rickettsioses","type":"related"},{"name":"spotted fever Group rickettsiosis","type":"related"},{"name":"spotted fever group rickettsial disease","type":"exact"},{"name":"spotted fever rickettsiae disease","type":"exact"},{"name":"spotted fever rickettsiosis","type":"exact"},{"name":"spotted fevers","type":"related"}],"termid":"MONDO:0001195","xrefs":{"Monarch":{"xref_id":"0001195"}}}


id: GO:0090405
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id: PBO:0082568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chaperone with a role in facilitating mitochondrial protein import; ascomycete-specific member of the DnaJ-like family, closely related to Ydj1p; predicted to be C-terminally prenylated; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0082568"}


id: PBO:0050633
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor family, X-linked member 3","termid":"PBO:0050633"}


id: PBO:0036145
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_transport_on_microtubule_tip_to_cell_tip_cortex_during_vegetative_growth","termid":"PBO:0036145"}


id: MONDO:0100430
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A liver disease characterized by the presence of excessive fibrous connective tissue in the liver.","definition_xrefs":["PMID:31722201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"fibrotic liver disease","synonyms":[{"name":"hepatic fibrosis (disease)","type":"exact"},{"name":"liver fibrosis (disease)","type":"exact"}],"termid":"MONDO:0100430","xrefs":{"Monarch":{"xref_id":"0100430"}}}


id: PBO:0044985
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 36","termid":"PBO:0044985"}


id: GO:0042768
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of an ecdysteroid at carbon position 2.","definition_xrefs":["PMID:12177427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"ecdysteroid 2-hydroxylase activity","termid":"GO:0042768"}


id: PBO:0049739
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit beta pseudogene 1","termid":"PBO:0049739"}


id: MONDO:0000594
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  {"annotated_genes":["SJAG_02279"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005260"}]},"cv_name":"mondo","definition":"A category of developmental disorders characterized by impaired communication and socialization skills. The impairments are incongruent with the individual's developmental level or mental age. These disorders can be associated with general medical or genetic conditions.","definition_xrefs":["NCIT:C97179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental disorder of mental health","termid":"MONDO:0005503"},{"relation_name":"is_a","term_name":"complex neurodevelopmental disorder","termid":"MONDO:0100038"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02279":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"pervasive developmental disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D002659","ICD9:299.80","MEDGEN:99336","DOID:0060040","SCTID:35919005","UMLS:C0524528"],"synonyms":[{"name":"pervasive child development disorders","type":"related"},{"name":"pervasive development disorder","type":"exact"},{"name":"pervasive development disorders","type":"related"}],"termid":"MONDO:0000594","terms_by_termid":{"MONDO:0005260":null},"xrefs":{"Monarch":{"xref_id":"0000594"}}}


id: FYPO:0000225
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id: MONDO:0010986
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the OTOF gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"},{"relation_name":"is_a","term_name":"auditory neuropathy","termid":"MONDO:0021944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 9","secondary_identifiers":["DOID:0110535","UMLS:C1832828","GARD:22588","OMIM:601071","MEDGEN:331376"],"synonyms":[{"name":"DFNB9","type":"narrow"},{"name":"NRSD9","type":"narrow"},{"name":"OTOF autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"auditory neuropathy, autosomal recessive, 1","type":"narrow"},{"name":"auditory neuropathy, nonsyndromic recessive","type":"narrow"},{"name":"autosomal recessive deafness 9","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 9","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in OTOF","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 9","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 9","type":"exact"},{"name":"deafness, autosomal recessive 9","type":"narrow"},{"name":"deafness, autosomal recessive type 9","type":"narrow"},{"name":"neurosensory nonsyndromic recessive deafness 9","type":"narrow"}],"termid":"MONDO:0010986","xrefs":{"Monarch":{"xref_id":"0010986"}}}


id: MONDO:0100494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant form of TTN-related myopathy.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"TTN-related myopathy","termid":"MONDO:0100175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant titinopathy","synonyms":[{"name":"TTN-related myopathy, autosomal dominant","type":"exact"}],"termid":"MONDO:0100494","xrefs":{"Monarch":{"xref_id":"0100494"}}}


id: MONDO:0000968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign adipose tissue neoplasm of the kidney. It predominantly affects middle-aged females. It may originate from renal parenchymal fat or fat cells within the renal capsule. Clinical presentation includes hematuria and pain.","definition_xrefs":["NCIT:C5101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney benign neoplasm","termid":"MONDO:0002513"},{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"kidney lipoma","secondary_identifiers":["DOID:10194","MEDGEN:277588","UMLS:C1335744"],"synonyms":[{"name":"kidney lipoma","type":"exact"},{"name":"lipoma of kidney","type":"exact"},{"name":"lipoma of the kidney","type":"exact"},{"name":"renal lipoma","type":"exact"}],"termid":"MONDO:0000968","xrefs":{"Monarch":{"xref_id":"0000968"}}}


id: PBO:0074785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 6","termid":"PBO:0074785"}


id: GO:0019648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathway in which formaldehyde is used as a carbon source in the xylulose monophosphate cycle. Methylotrophic yeasts, but not bacteria, utilize the xylulose monophosphate cycle to fix formaldehyde and convert it into metabolically useful organic compounds.","definition_xrefs":["MetaCyc:P185-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formaldehyde assimilation","termid":"GO:0019649"},{"relation_name":"is_a","term_name":"D-xylulose 5-phosphate metabolic process","termid":"GO:0051167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"formaldehyde assimilation via xylulose monophosphate cycle","synonyms":[{"name":"formaldehyde assimilation via xylulose-5-phosphate cycle","type":"exact"},{"name":"formaldehyde fixation cycle","type":"exact"}],"termid":"GO:0019648"}


id: GO:0102730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cathasterone + O2 + a reduced electron acceptor = teasterone + H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cathasterone hydroxylase activity (obsolete GO:0102730)","termid":"GO:0102730"}


id: MONDO:0002425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the rectosigmoid area. Representative examples include carcinoma, lymphoma, and sarcoma.","definition_xrefs":["NCIT:C7420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sigmoid colon cancer","termid":"MONDO:0001464"},{"relation_name":"is_a","term_name":"rectosigmoid junction neoplasm","termid":"MONDO:0002423"},{"relation_name":"is_a","term_name":"rectal cancer","termid":"MONDO:0006519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"rectosigmoid junction cancer","secondary_identifiers":["SCTID:363414004","DOID:2782","UMLS:C0153443","ICD10CM:C19","MEDGEN:57558","ICD9:154.0"],"synonyms":[{"name":"cancer of rectosigmoid junction","type":"exact"},{"name":"malignant neoplasm of rectosigmoid","type":"exact"},{"name":"malignant neoplasm of rectosigmoid junction","type":"exact"},{"name":"malignant neoplasm of the rectosigmoid junction","type":"exact"},{"name":"malignant rectosigmoid junction neoplasm","type":"exact"},{"name":"malignant rectosigmoid neoplasm","type":"exact"},{"name":"malignant rectosigmoid tumor","type":"exact"},{"name":"malignant rectosigmoid tumour","type":"exact"},{"name":"malignant tumor of rectosigmoid junction","type":"exact"},{"name":"malignant tumor of the rectosigmoid junction","type":"exact"},{"name":"malignant tumour of rectosigmoid junction","type":"exact"},{"name":"malignant tumour of the rectosigmoid junction","type":"exact"},{"name":"rectosigmoid junction cancer","type":"exact"}],"termid":"MONDO:0002425","xrefs":{"Monarch":{"xref_id":"0002425"}}}


id: GO:0032552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a deoxyribonucleotide, any compound consisting of a deoxyribonucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the deoxyribose moiety.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide binding","termid":"GO:0000166"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"deoxyribonucleotide binding","termid":"GO:0032552"}


id: MONDO:0012774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"15q13.3 microdeletion (microdel15q13.3) syndrome is characterized by a wide spectrum of neurodevelopmental disorders with no or subtle dysmorphic features.","definition_xrefs":["Orphanet:199318"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 15","termid":"MONDO:0016913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"chromosome 15q13.3 microdeletion syndrome","secondary_identifiers":["UMLS:C2677613","DECIPHER:74","MEDGEN:393784","GARD:10296","MESH:C567439","DOID:0060394","OMIM:612001","SCTID:699254009"],"synonyms":[{"name":"15q13.3 microdeletion","type":"related"},{"name":"15q13.3 microdeletion syndrome","type":"exact"},{"name":"Del(15)(q13.3)","type":"exact"},{"name":"chromosome 15q13.3 deletion syndrome","type":"related"},{"name":"chromosome 15q13.3 microdeletion syndrome","type":"exact"},{"name":"microdeletion 15q13.3 syndrome","type":"related"},{"name":"monosomy 15q13.3","type":"exact"}],"termid":"MONDO:0012774","xrefs":{"Monarch":{"xref_id":"0012774"}}}


id: PBO:0075919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 11","termid":"PBO:0075919"}


id: PBO:0050074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxymethylbilane synthase","termid":"PBO:0050074"}


id: GO:0044879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A signaling process that contributes to a mitotic cell cycle checkpoint which delays mitotic onset in response to perturbations that affect cell shape via the actin cytoskeleton, septin organization, small cell size, and/or the extent of membrane growth.","definition_xrefs":["GOC:jl","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0023052"],"is_obsolete":false,"name":"mitotic morphogenesis checkpoint signaling","secondary_identifiers":["GO:1903822"],"synonyms":[{"name":"morphogenesis checkpoint","type":"exact"},{"name":"septin checkpoint","type":"exact"},{"name":"signal transduction involved in morphogenesis checkpoint","type":"exact"},{"name":"signal transduction involved in septin checkpoint","type":"exact"},{"name":"signaling cascade involved in morphogenesis checkpoint","type":"exact"},{"name":"signaling cascade involved in septin checkpoint","type":"exact"},{"name":"signaling pathway involved in morphogenesis checkpoint","type":"exact"},{"name":"signaling pathway involved in septin checkpoint","type":"exact"},{"name":"signalling cascade involved in morphogenesis checkpoint","type":"exact"},{"name":"signalling cascade involved in septin checkpoint","type":"exact"},{"name":"signalling pathway involved in morphogenesis checkpoint","type":"exact"},{"name":"signalling pathway involved in septin checkpoint","type":"exact"}],"termid":"GO:0044879"}


id: GO:0072214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric cortex over time, from its formation to the mature structure. The metanephric cortex is the outer region of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchyme development","termid":"GO:0060485"},{"relation_name":"is_a","term_name":"renal cortex development","termid":"GO:0072055"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric cortex development","termid":"GO:0072214"}


id: MONDO:0100508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of uncommon neoplasms, usually seen in the salivary glands but occurring in the breast, with a variable clinicopathologic spectrum and divided into those with myoepithelial differentiation and those without. This group includes mammary adenoid cystic carcinoma, adenoid cystic carcinoma, mucoepidermoid carcinoma, acinic cell carcinoma, polymorphous low-grade adenocarcinoma and oncocytic carcinoma.","definition_xrefs":["Orphanet:213557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast cancer","termid":"MONDO:0007254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"salivary gland type cancer of the breast","secondary_identifiers":["ICD10CM:C50.2","icd11.foundation:2145246967","GARD:12774","ICD10CM:C50.3","ICD10CM:C50.6","UMLS:C4274421","MEDGEN:903115","SCTID:716593008"],"synonyms":[{"name":"salivary gland type carcinoma of the breast","type":"exact"}],"termid":"MONDO:0100508","xrefs":{"Monarch":{"xref_id":"0100508"}}}


id: GO:0009874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A mechanism that functions to prevent self-fertilization in flowering plants that is determined by the diploid genotype of the parent plant. In sporophytic incompatibility the pollen does not germinate, consequently fertilization does not take place.","definition_xrefs":["ISBN:0387987819"],"gene_count":0,"genotype_count":0,"name":"obsolete sporophytic self-incompatibility (obsolete GO:0009874)","synonyms":[{"name":"sporophytic self-incompatibility","type":"exact"}],"termid":"GO:0009874"}


id: PBO:0046077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 2","termid":"PBO:0046077"}


id: GO:0102139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (2E,4E)-6-(2-aminophenyl)-2-hydroxy-6-oxohexa-2,4-dienoate + H2O = H+ + anthranilate + (2E)-2-hydroxypenta-2,4-dienoate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-6-oxo-6-(2'-aminophenyl)-hexa-2,4dienoate hydrolase activity (obsolete GO:0102139)","termid":"GO:0102139"}


id: PBO:0061157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NmrA like redox sensor 2, pseudogene","termid":"PBO:0061157"}


id: MONDO:0002906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete scleroderma (obsolete MONDO:0002906)","termid":"MONDO:0002906","xrefs":{"Monarch":{"xref_id":"0002906"}}}


id: GO:0006891
data:
  {"annotated_genes":["SJAG_04023","SJAG_04021","SJAG_01508","SJAG_04358","SJAG_00804","SJAG_02234","SJAG_01415","SJAG_04070","SJAG_04837","SJAG_00578","SJAG_00332","SJAG_00330","SJAG_04739","SJAG_01600","SJAG_04569","SJAG_01459","SJAG_02655","SJAG_02316","SJAG_02211","SJAG_02525","SJAG_01071","SJAG_04474","SJAG_02750","SJAG_03158","SJAG_00041","SJAG_03054","SJAG_00192","SJAG_03467","SJAG_05030","SJAG_03663","SJAG_03842","SJAG_04002"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57595,71371,71943,72061,72625,73270,75402,77087,77886,79142,79803,80117,80696,81679,90527,98206,99218,99658,100367,101681,102260,104464,105305,106847,109084,111538,111802],"is_not":false,"summary":null,"term":"GO:0006891"},{"annotations":[100008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048219"},{"annotations":[118842,93027,90830,111474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000301"}]},"cv_name":"biological_process","definition":"The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network).","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00041":null,"SJAG_00192":null,"SJAG_00330":null,"SJAG_00332":null,"SJAG_00578":null,"SJAG_00804":null,"SJAG_01071":null,"SJAG_01415":null,"SJAG_01459":null,"SJAG_01508":null,"SJAG_01600":null,"SJAG_02211":null,"SJAG_02234":null,"SJAG_02316":null,"SJAG_02525":null,"SJAG_02655":null,"SJAG_02750":null,"SJAG_03054":null,"SJAG_03158":null,"SJAG_03467":null,"SJAG_03663":null,"SJAG_03842":null,"SJAG_04002":null,"SJAG_04021":null,"SJAG_04023":null,"SJAG_04070":null,"SJAG_04358":null,"SJAG_04474":null,"SJAG_04569":null,"SJAG_04739":null,"SJAG_04837":null,"SJAG_05030":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"intra-Golgi vesicle-mediated transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"intra-Golgi transport","type":"exact"}],"termid":"GO:0006891","terms_by_termid":{"GO:0000301":null,"GO:0006891":null,"GO:0048219":null}}


id: FYPO:0005971
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which proton transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal proton transport","synonyms":[{"name":"abnormal H+ ion transport","type":"exact"},{"name":"abnormal hydrogen ion transport","type":"exact"},{"name":"abnormal proton transmembrane transport","type":"exact"}],"termid":"FYPO:0005971"}


id: PBO:0065886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB34, member RAS oncogene family","termid":"PBO:0065886"}


id: PBO:0017471
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-encompasses","termid":"PBO:0017471"}


id: MONDO:0022985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"},{"relation_name":"is_a","term_name":"benign neoplasm of rectum","termid":"MONDO:0021462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diffuse cavernous hemangioma of the rectum","synonyms":[{"name":"cavernous haemangioma of the rectum","type":"related"}],"termid":"MONDO:0022985","xrefs":{"Monarch":{"xref_id":"0022985"}}}


id: GO:2000336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endothelial microparticle formation.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of blood microparticle formation","termid":"GO:2000333"},{"relation_name":"is_a","term_name":"regulation of endothelial microparticle formation","termid":"GO:2000335"},{"relation_name":"negatively_regulates","term_name":"endothelial microparticle formation","termid":"GO:0072565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endothelial microparticle formation","synonyms":[{"name":"negative regulation of endothelial microparticle generation","type":"exact"},{"name":"negative regulation of endothelial microparticle release","type":"exact"}],"termid":"GO:2000336"}


id: PBO:0070715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 20","termid":"PBO:0070715"}


id: GO:0071650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of chemokine (C-C motif) ligand 5.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 5 production","termid":"GO:0071649"},{"relation_name":"negatively_regulates","term_name":"chemokine (C-C motif) ligand 5 production","termid":"GO:0071609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of chemokine (C-C motif) ligand 5 production","synonyms":[{"name":"negative regulation of CCL5 production","type":"exact"},{"name":"negative regulation of RANTES production","type":"exact"},{"name":"negative regulation of Regulated upon Activation, Normal T-cell Expressed, and Secreted production","type":"exact"}],"termid":"GO:0071650"}


id: MONDO:0003535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma that arises from the fallopian tube and is characterized by a papillary architectural pattern.","definition_xrefs":["NCIT:C6267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary adenocarcinoma","termid":"MONDO:0002512"},{"relation_name":"is_a","term_name":"fallopian tube adenocarcinoma","termid":"MONDO:0002746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fallopian tube papillary adenocarcinoma","secondary_identifiers":["MEDGEN:234261","DOID:5597","UMLS:C1333595"],"synonyms":[{"name":"fallopian tube papillary adenocarcinoma","type":"exact"},{"name":"papillary adenocarcinoma of fallopian tube","type":"exact"},{"name":"papillary adenocarcinoma of the fallopian tube","type":"exact"}],"termid":"MONDO:0003535","xrefs":{"Monarch":{"xref_id":"0003535"}}}


id: GO:0009007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + DNA adenine = S-adenosyl-L-homocysteine + DNA 6-methylaminopurine.","definition_xrefs":["EC:2.1.1.72"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"},{"relation_name":"is_a","term_name":"DNA-methyltransferase activity","termid":"GO:0009008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0140097","GO:0003824"],"is_obsolete":false,"name":"site-specific DNA-methyltransferase (adenine-specific) activity","secondary_identifiers":["MetaCyc:2.1.1.72-RXN","RHEA:15197"],"synonyms":[{"name":"DNA adenine methylase","type":"broad"},{"name":"EcoRI methylase","type":"narrow"},{"name":"N-6 adenine-specific DNA methylase activity","type":"related"},{"name":"modification methylase activity","type":"related"},{"name":"restriction-modification system activity","type":"related"}],"termid":"GO:0009007"}


id: PBO:0004302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-60S shuttlingfactor (predicted)","termid":"PBO:0004302"}


id: GO:0060769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of epithelial cell proliferation that contributes to the progression of the prostate gland over time.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation involved in prostate gland development","termid":"GO:0060768"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"epithelial cell proliferation involved in prostate gland development","termid":"GO:0060767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial cell proliferation involved in prostate gland development","termid":"GO:0060769"}


id: FYPO:0007257
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body begins later than normal during the first meiotic nuclear division.","definition_xrefs":["PMID:29259000","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to meiotic spindle pole body","termid":"FYPO:0002772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"delayed onset of protein localization to meiotic spindle pole body during meiosis I","synonyms":[{"name":"delayed onset of protein localisation to meiotic spindle pole body during meiosis I","type":"exact"},{"name":"delayed onset of protein localization to meiotic SPB during meiosis I","type":"exact"},{"name":"delayed onset of protein localization to meiotic spindle pole body during first meiotic nuclear division","type":"exact"},{"name":"delayed onset of protein localization to spindle pole body during meiosis I","type":"exact"},{"name":"delayed protein localization to meiotic spindle pole body during meiosis II","type":"exact"}],"termid":"FYPO:0007257"}


id: MONDO:0000371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the oral cavity.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"},{"relation_name":"is_a","term_name":"oral cavity carcinoma","termid":"MONDO:0044925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"oral cavity carcinoma in situ","secondary_identifiers":["MEDGEN:138076","NCIT:C4587","DOID:0050610","SCTID:92660005","UMLS:C0347073","MONDO:0021286"],"synonyms":[{"name":"carcinoma in situ of mouth","type":"exact"},{"name":"carcinoma in situ of oral cavity","type":"exact"},{"name":"carcinoma in situ of the mouth","type":"exact"},{"name":"carcinoma in situ of the oral cavity","type":"exact"},{"name":"mouth carcinoma in situ","type":"exact"},{"name":"oral cavity in situ carcinoma","type":"exact"},{"name":"stage 0 carcinoma of mouth","type":"exact"},{"name":"stage 0 carcinoma of oral cavity","type":"exact"},{"name":"stage 0 carcinoma of the mouth","type":"exact"},{"name":"stage 0 carcinoma of the oral cavity","type":"exact"},{"name":"stage 0 mouth carcinoma","type":"exact"},{"name":"stage 0 oral cavity cancer","type":"exact"},{"name":"stage 0 oral cavity cancer aJCC v6","type":"exact"},{"name":"stage 0 oral cavity cancer aJCC v6 and v7","type":"exact"},{"name":"stage 0 oral cavity cancer aJCC v7","type":"exact"},{"name":"stage 0 oral cavity carcinoma","type":"exact"}],"termid":"MONDO:0000371","xrefs":{"Monarch":{"xref_id":"0000371"}}}


id: GO:1903599
data:
  {"annotated_genes":["SJAG_04502"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70570],"is_not":false,"summary":null,"term":"GO:1903599"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitochondrion degradation by autophagy.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:21753002","GOC:PARL","GOC:autophagy","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of autophagy","termid":"GO:0010508"},{"relation_name":"is_a","term_name":"regulation of autophagy of mitochondrion","termid":"GO:1903146"},{"relation_name":"positively_regulates","term_name":"autophagy of mitochondrion","termid":"GO:0000422"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04502":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"positive regulation of autophagy of mitochondrion","references_by_uniquename":{"GO_REF:0000104":null},"synonyms":[{"name":"activation of mitochondrion degradation","type":"related"},{"name":"activation of mitophagy","type":"narrow"},{"name":"positive regulation of mitochondrial degradation","type":"broad"},{"name":"up regulation of mitochondrion degradation","type":"broad"},{"name":"up regulation of mitophagy","type":"exact"},{"name":"up-regulation of mitochondrion degradation","type":"broad"},{"name":"up-regulation of mitophagy","type":"exact"},{"name":"upregulation of mitochondrion degradation","type":"broad"},{"name":"upregulation of mitophagy","type":"exact"}],"termid":"GO:1903599","terms_by_termid":{"GO:1903599":null}}


id: PR:Q10141
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mms1 gene.","definition_xrefs":["UniProtKB:Q10141","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3H8.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.05c","synonyms":[{"name":"Spom972h-mms1","type":"exact"}],"termid":"PR:Q10141"}


id: PBO:0050530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hippocalcin like 4","termid":"PBO:0050530"}


id: PBO:0050508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox C8","termid":"PBO:0050508"}


id: GO:0032919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of spermine by addition of acetyl groups.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermine metabolic process","termid":"GO:0008215"},{"relation_name":"is_a","term_name":"polyamine acetylation","termid":"GO:0032917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermine acetylation","termid":"GO:0032919"}


id: PBO:0071225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 66","termid":"PBO:0071225"}


id: PBO:0049632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 35","termid":"PBO:0049632"}


id: PBO:0085775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein lysine methyltransferase; monomethylates Lys-46 of the ribosomal large subunit Rpl1a/Rpl1b; member of the seven beta-strand methyltransferase superfamily; orthologs only found among fungal species","termid":"PBO:0085775"}


id: PBO:0030823
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_chlorpromazine","termid":"PBO:0030823"}


id: PBO:0081014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB46 antisense RNA 2","termid":"PBO:0081014"}


id: MONDO:0016374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuralgia that involves the cranial neuron projection bundle.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve neuropathy","termid":"MONDO:0003569"},{"relation_name":"is_a","term_name":"acquired peripheral neuropathy","termid":"MONDO:0015923"},{"relation_name":"is_a","term_name":"neuralgia","termid":"MONDO:0021667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"cranial neuralgia","secondary_identifiers":["Orphanet:221109","SCTID:23096007","MEDGEN:507603","UMLS:C0010269","GARD:20542"],"synonyms":[{"name":"cranial neuron projection bundle neuralgia","type":"exact"},{"name":"facial neuralgia","type":"narrow"},{"name":"neuralgia of cranial neuron projection bundle","type":"exact"}],"termid":"MONDO:0016374","xrefs":{"Monarch":{"xref_id":"0016374"}}}


id: GO:0034885
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gamma-N-formylaminovinylacetate + H2O = gamma-aminovinylacetate + HCOOH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-N-formylaminovinylacetate hydrolase activity (obsolete GO:0034885)","termid":"GO:0034885"}


id: PBO:0004324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C3HC4 type (RING finger)/GCN5-related N acetyltransferase fusion protein","termid":"PBO:0004324"}


id: PBO:0041695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium homeostasis modulator 1","termid":"PBO:0041695"}


id: PBO:0040814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICD family like 3, pseudogene","termid":"PBO:0040814"}


id: MONDO:0006453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An aggressive, small cell, poorly differentiated thymic neuroendocrine carcinoma, characterized by the presence of a high mitotic rate and numerous apoptotic bodies.","definition_xrefs":["NCIT:C6460"],"gene_count":0,"genotype_count":0,"name":"obsolete thymic small cell carcinoma (obsolete MONDO:0006453)","termid":"MONDO:0006453","xrefs":{"Monarch":{"xref_id":"0006453"}}}


id: MONDO:0003287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the central nervous system. It is characterized by the presence of intersecting fascicles composed of spindle cells that often lack mitotic activity.","definition_xrefs":["NCIT:C6998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"},{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system leiomyoma","secondary_identifiers":["MEDGEN:232695","DOID:5126","UMLS:C1334382"],"synonyms":[{"name":"central nervous system leiomyoma","type":"exact"},{"name":"leiomyoma of CNS","type":"exact"},{"name":"leiomyoma of central nervous system","type":"exact"},{"name":"leiomyoma of the CNS","type":"exact"},{"name":"leiomyoma of the central nervous system","type":"exact"}],"termid":"MONDO:0003287","xrefs":{"Monarch":{"xref_id":"0003287"}}}


id: SO:0000197
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of the three_prime_coding_exon that codes for protein.","definition_xrefs":["SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_region_of_exon","termid":"SO:0001215"},{"relation_name":"part_of","term_name":"three_prime_coding_exon","termid":"SO:0000202"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_coding_exon_coding_region","synonyms":[{"name":"three prime exon coding region","type":"exact"}],"termid":"SO:0000197"}


id: MOD:00191
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts L-tyrosine to (Z)-2,3-didehydrotyrosine.","definition_xrefs":["PubMed:9631087","RESID:AA0183","PubMed:1347277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehydrogenated tyrosine","termid":"MOD:00706"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(Z)-2,3-didehydrotyrosine","synonyms":[{"name":"(2Z)-2-amino-3-(4-hydroxyphenyl)prop-2-enoic acid","type":"exact"},{"name":"(Z)-2,3-didehydrogenated tyrosine","type":"exact"},{"name":"(Z)-2,3-didehydrotyrosine","type":"exact"},{"name":"2-amino-3-oxo-butanoic_acid","type":"related"},{"name":"Didehydro","type":"related"},{"name":"MOD_RES (Z)-2,3-didehydrotyrosine","type":"exact"},{"name":"Z-dHTyr","type":"exact"},{"name":"amino-(para-hydroxybenzylidenyl)acetic acid","type":"exact"},{"name":"cis-dehydrotyrosine","type":"exact"},{"name":"green fluorescent protein chromophore","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"},{"name":"red fluorescent protein chromophore","type":"exact"}],"termid":"MOD:00191"}


id: GO:0021924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of neuroblasts resulting in the expansion of a cell population in the external granule layer of the hindbrain. The external granule layer is the layer that originates from the rostral half of the rhombic lip in the first rhombomere.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:jid","PMID:15157725","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in hindbrain","termid":"GO:0021534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation in external granule layer","termid":"GO:0021924"}


id: GO:0090256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to imaginal disc-derived wing morphogenesis.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"},{"relation_name":"regulates","term_name":"cell proliferation involved in imaginal disc-derived wing morphogenesis","termid":"GO:0090255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in imaginal disc-derived wing morphogenesis","termid":"GO:0090256"}


id: PBO:0068943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 187, pseudogene","termid":"PBO:0068943"}


id: PBO:0058846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8075","termid":"PBO:0058846"}


id: GO:0046778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that interferes with the processing of mRNA in the host cell.","definition_xrefs":["ISBN:0781718325"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by virus of host mRNA processing (obsolete GO:0046778)","synonyms":[{"name":"viral perturbation of host mRNA processing","type":"exact"}],"termid":"GO:0046778"}


id: FYPO:0001790
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which plasmids are lost at the same frequency as in wild-type cells. Plasmid loss occurs when one or both daughter cells do not inherit copies of a plasmid from the mother cell, and may result from failure of plasmid replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell phenotype","termid":"FYPO:0000002"},{"relation_name":"is_a","term_name":"normal vegetative phenotype","termid":"FYPO:0001312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal plasmid loss","termid":"FYPO:0001790"}


id: GO:0065003
data:
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id: SO:1000145
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ring chromosome which is a copy of another chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"free","termid":"SO:0001516"},{"relation_name":"is_a","term_name":"ring_chromosome","termid":"SO:1000045"},{"relation_name":"is_a","term_name":"free_duplication","termid":"SO:1000144"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"free_ring_duplication","synonyms":[{"name":"(Drosophila)R","type":"related"},{"name":"free ring duplication","type":"exact"}],"termid":"SO:1000145"}


id: GO:0019092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a srRNA, small subunit ribosomal ribonucleic acid, is transported from the mitochondrial matrix into the cytosol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial rRNA export from mitochondrion","termid":"GO:0019090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"mitochondrial srRNA export from mitochondrion","synonyms":[{"name":"export of mitochondrial srRNA","type":"broad"},{"name":"mitochondrial srRNA export","type":"exact"},{"name":"mitochondrial srRNA export from mitochondria","type":"exact"},{"name":"mitochondrial srRNA export out of mitochondrion","type":"exact"},{"name":"mitochondrial srRNA transport from mitochondrion","type":"exact"},{"name":"mitochondrial srRNA, mitochondrial export","type":"exact"}],"termid":"GO:0019092"}


id: PBO:0074344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3","termid":"PBO:0074344"}


id: PBO:0088615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I general transcription initiation factor subunit Rrn11","termid":"PBO:0088615"}


id: PBO:0047314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAST kinase domains 3","termid":"PBO:0047314"}


id: MONDO:0010253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"headache disorder","termid":"MONDO:0021146"},{"relation_name":"is_a","term_name":"migraine with or without aura, susceptibility to","termid":"MONDO:0100246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine, familial typical, susceptibility to, 2","secondary_identifiers":["MEDGEN:341144","OMIM:300125","UMLS:C1848066"],"synonyms":[{"name":"Mfts","type":"related"},{"name":"Mgr2","type":"related"},{"name":"migraine with or without aura, susceptibility to, 2","type":"related"},{"name":"migraine, familial typical, susceptibility to, 2","type":"exact"},{"name":"migraine, familial typical, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0010253","xrefs":{"Monarch":{"xref_id":"0010253"}}}


id: PBO:0057077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR155 host gene","termid":"PBO:0057077"}


id: GO:0102244
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-aminopropanal + H2O + NAD+ = beta-alanine + 2 H+ + NADH.","definition_xrefs":["RHEA:30695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-aminopropanal dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:RXN-12332"],"termid":"GO:0102244"}


id: MONDO:0859517
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88407],"is_not":false,"summary":null,"term":"MONDO:0859517"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"congenital myopathy 2b, severe infantile, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1840936","OMIM:620265","DOID:0081339","UMLS:C5830300"],"termid":"MONDO:0859517","terms_by_termid":{"MONDO:0859517":null},"xrefs":{"Monarch":{"xref_id":"0859517"}}}


id: MONDO:0003358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the anus. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anus sarcoma","termid":"MONDO:0002865"},{"relation_name":"is_a","term_name":"rectum leiomyosarcoma","termid":"MONDO:0003379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"anus leiomyosarcoma","secondary_identifiers":["UMLS:C1332267","NCIT:C5599","MEDGEN:231370","DOID:5267"],"synonyms":[{"name":"anal leiomyosarcoma","type":"exact"},{"name":"anus leiomyosarcoma","type":"exact"},{"name":"leiomyosarcoma of anus","type":"exact"},{"name":"leiomyosarcoma of the anus","type":"exact"}],"termid":"MONDO:0003358","xrefs":{"Monarch":{"xref_id":"0003358"}}}


id: GO:0010289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the pectidic homogalacturonan, characterized by a backbone of (1->4)-linked alpha-D-GalpA residues that can be methyl-esterified at C-6 and carry acetyl groups on O-2 and O-3.","definition_xrefs":["PMID:12913136","PMID:16540543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homogalacturonan metabolic process","termid":"GO:0010394"},{"relation_name":"is_a","term_name":"cell wall pectin biosynthetic process","termid":"GO:0052325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0005975","GO:0044085"],"is_obsolete":false,"name":"homogalacturonan biosynthetic process","secondary_identifiers":["MetaCyc:PWY-1061"],"termid":"GO:0010289"}


id: FYPO:0001591
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of histidine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"},{"relation_name":"is_a","term_name":"abnormal histidine import","termid":"FYPO:0001655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased histidine import","synonyms":[{"name":"decreased L-histidine import","type":"exact"},{"name":"decreased L-histidine import across plasma membrane","type":"exact"},{"name":"decreased histidine import during mitotic cell cycle","type":"related"},{"name":"decreased histidine import during vegetative growth","type":"exact"},{"name":"decreased histidine import into cell","type":"exact"},{"name":"decreased histidine uptake","type":"exact"},{"name":"reduced histidine import","type":"exact"}],"termid":"FYPO:0001591"}


id: MONDO:0031520
data:
  {"annotated_genes":["SJAG_04199","SJAG_02038"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012650"},{"annotations":[87471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009973"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency","termid":"MONDO:0015974"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02038":null,"SJAG_04199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"familial severe combined immunodeficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:601457"],"termid":"MONDO:0031520","terms_by_termid":{"MONDO:0009973":null,"MONDO:0012650":null},"xrefs":{"Monarch":{"xref_id":"0031520"}}}


id: GO:0030042
data:
  {"annotated_genes":["SJAG_01894","SJAG_02700","SJAG_03380","SJAG_00279","SJAG_03025","SJAG_01993"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71863,75133],"is_not":false,"summary":null,"term":"GO:0030042"},{"annotations":[81977,80924,94206,77314],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"Disassembly of actin filaments by the removal of actin monomers from a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin polymerization or depolymerization","termid":"GO:0008154"},{"relation_name":"is_a","term_name":"protein depolymerization","termid":"GO:0051261"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_03025":null,"SJAG_03380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"actin filament depolymerization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"actin depolymerization","type":"exact"},{"name":"actin depolymerizing activity","type":"related"}],"termid":"GO:0030042","terms_by_termid":{"GO:0030042":null,"GO:0051016":null}}


id: PBO:0057933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3659 host gene","termid":"PBO:0057933"}


id: GO:0018619
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzene + H+ + NADH + O2 = cis-cyclohexa-3,5-diene-1,2-diol + NAD+.","definition_xrefs":["EC:1.14.12.3","RHEA:13813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"benzene 1,2-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R03543","MetaCyc:BENZENE-12-DIOXYGENASE-RXN","UM-BBD_reactionID:r0079"],"synonyms":[{"name":"benzene dioxygenase activity","type":"related"},{"name":"benzene hydroxylase activity","type":"related"},{"name":"benzene,NADH:oxygen oxidoreductase (1,2-hydroxylating)","type":"related"}],"termid":"GO:0018619"}


id: PBO:0049083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 137C","termid":"PBO:0049083"}


id: PBO:0044057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin C","termid":"PBO:0044057"}


id: MONDO:0017231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited porphyria","termid":"MONDO:0019142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0019142"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0019142","MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"erythropoietic uroporphyria associated with myeloid malignancy","secondary_identifiers":["MEDGEN:1679887","GARD:10948","UMLS:C5191004","Orphanet:280379"],"termid":"MONDO:0017231","xrefs":{"Monarch":{"xref_id":"0017231"}}}


id: PR:Q9P3U2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC328.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3U2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized AAA domain-containing protein C328.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.04","synonyms":[{"name":"Spom972h-SPAC328.04","type":"exact"}],"termid":"PR:Q9P3U2"}


id: GO:0047797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + cyclohexanone = AH(2) + cyclohex-2-enone.","definition_xrefs":["EC:1.3.99.14","RHEA:21780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"cyclohexanone dehydrogenase activity","secondary_identifiers":["MetaCyc:CYCLOHEXANONE-DEHYDROGENASE-RXN","KEGG_REACTION:R02234"],"synonyms":[{"name":"cyclohexanone:(acceptor) 2-oxidoreductase activity","type":"related"},{"name":"cyclohexanone:acceptor 2-oxidoreductase activity","type":"related"}],"termid":"GO:0047797"}


id: PBO:0082663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the cleavage and polyadenylation factor I (CF I); CF 1, composed of the CF 1A complex (Rna14p, Rna15p, Clp1p, Pcf11p) and Hrp1, is involved in cleavage and polyadenylation of mRNA 3' ends; involved in both the endonucleolyitc cleavage and polyadenylation steps of mRNA 3'-end maturation and in gene looping which affects reinitiation of transcription; mutations in human ortholog cause cerebellar neurodegeneration","termid":"PBO:0082663"}


id: PBO:0064059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 93","termid":"PBO:0064059"}


id: FYPO:0004407
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to triplatin tetranitrate (also called BBR 3464). Cells stop growing (and may die) at a concentration of triplatin tetranitrate that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to triplatin tetranitrate","synonyms":[{"name":"hypersensitive to triplatin tetranitrate","type":"exact"},{"name":"sensitive to BBR 3464","type":"exact"},{"name":"sensitive to triplatin tetranitrate during mitotic cell cycle","type":"related"},{"name":"sensitive to triplatin tetranitrate during vegetative growth","type":"exact"}],"termid":"FYPO:0004407"}


id: FYPO:0006430
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, and contains a single nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"has_part","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable mononucleate vegetative cell","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"inviable mononucleate cell during vegetative growth","type":"exact"}],"termid":"FYPO:0006430","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0053240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHFPL tetraspan subfamily member 4","termid":"PBO:0053240"}


id: GO:0014005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a microglial cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:ef","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell development","termid":"GO:0021782"},{"relation_name":"is_a","term_name":"myeloid cell development","termid":"GO:0061515"},{"relation_name":"part_of","term_name":"microglia differentiation","termid":"GO:0014004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microglia development","synonyms":[{"name":"microglial cell development","type":"exact"}],"termid":"GO:0014005"}


id: MONDO:0010996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hemorrhagic telangiectasia","termid":"MONDO:0019180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"hereditary hemorrhagic telangiectasia type 3","secondary_identifiers":["MEDGEN:371403","UMLS:C1832774","MESH:C537140","OMIM:601101","GARD:9902"],"synonyms":[{"name":"HHT3","type":"related"},{"name":"ORW3","type":"related"},{"name":"Osler Weber Rendu syndrome type 3","type":"related"},{"name":"telangiectasia hereditary hemorrhagic type 3","type":"related"},{"name":"telangiectasia, hereditary hemorrhagic, type 3","type":"related"}],"termid":"MONDO:0010996","xrefs":{"Monarch":{"xref_id":"0010996"}}}


id: PBO:0050622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 14","termid":"PBO:0050622"}


id: MONDO:0012737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any long QT syndrome in which the cause of the disease is a mutation in the SCN4B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"long QT syndrome","termid":"MONDO:0002442"},{"relation_name":"is_a","term_name":"familial long QT syndrome","termid":"MONDO:0019171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"long QT syndrome 10","secondary_identifiers":["OMIM:611819","MESH:C567514","DOID:0110651","UMLS:C2678484","MEDGEN:394836","GARD:10436"],"synonyms":[{"name":"LQT10","type":"exact"},{"name":"SCN4B long QT syndrome","type":"exact"},{"name":"atrial fibrillation, familial, 17","type":"related"},{"name":"long QT syndrome 10","type":"exact"},{"name":"long QT syndrome caused by mutation in SCN4B","type":"exact"},{"name":"long QT syndrome type 10","type":"exact"}],"termid":"MONDO:0012737","xrefs":{"Monarch":{"xref_id":"0012737"}}}


id: MONDO:0020244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete unclassified primitive or secondary maculopathy (obsolete MONDO:0020244)","secondary_identifiers":["Orphanet:98666"],"termid":"MONDO:0020244","xrefs":{"Monarch":{"xref_id":"0020244"}}}


id: GO:0070932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of one or more acetyl groups.","definition_xrefs":["GOC:rl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3 deacetylation (obsolete GO:0070932)","termid":"GO:0070932"}


id: PBO:0058141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4437","termid":"PBO:0058141"}


id: PBO:0008726
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previusly annotated as SPBTRNAASP.03","termid":"PBO:0008726"}


id: PBO:0005304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component beta 3, Pup3 (predicted)","termid":"PBO:0005304"}


id: PBO:0116683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 14","termid":"PBO:0116683"}


id: GO:0015436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + capsular polysaccharide(in) = ADP + phosphate + capsular polysaccharide(out).","definition_xrefs":["EC:7.6.2.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled carboxylic acid transmembrane transporter activity","termid":"GO:0033284"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ABC-type capsular-polysaccharide transporter activity","secondary_identifiers":["MetaCyc:3.6.3.38-RXN"],"synonyms":[{"name":"ATP phosphohydrolase (capsular-polysaccharide-exporting)","type":"related"},{"name":"ATP-dependent capsular-polysaccharide transporter activity","type":"exact"},{"name":"ATPase-coupled capsular-polysaccharide transporter activity","type":"related"},{"name":"capsular-polysaccharide ABC transporter","type":"narrow"},{"name":"capsular-polysaccharide-transporting ATPase activity","type":"exact"}],"termid":"GO:0015436"}


id: PBO:0003179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/M B-type cyclin Cdc13","termid":"PBO:0003179"}


id: PBO:0034357
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-develops_from_part_of","termid":"PBO:0034357"}


id: PBO:0063135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter of MAT2A antisense radiation-induced circulating long non-coding RNA","termid":"PBO:0063135"}


id: GO:0005901
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane raft that forms small pit, depression, or invagination that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Examples include flask-shaped invaginations of the plasma membrane in adipocytes associated with caveolin proteins, and minute pits or incuppings of the cell membrane formed during pinocytosis. Caveolae may be pinched off to form free vesicles within the cytoplasm.","definition_xrefs":["GOC:mah","ISBN:0721662544","PMID:16645198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane raft","termid":"GO:0044853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"caveola","secondary_identifiers":["GO:0016599","Wikipedia:Caveolae"],"synonyms":[{"name":"caveolae","type":"exact"},{"name":"caveolar membrane","type":"related"}],"termid":"GO:0005901"}


id: MONDO:0019023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cutaneous mastocytosis is a term referring to a group of diseases characterized by abnormal accumulation and proliferation of skin mastocytes. In some cases (most commonly in adults), cutaneous mastocytosis may occur in association with mast cell infiltration of various extracutaneous organs, in which case the disorder is referred to as systemic mastocytosis.","definition_xrefs":["Orphanet:66646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis tumor","termid":"MONDO:0002300"},{"relation_name":"is_a","term_name":"urticaria","termid":"MONDO:0005492"},{"relation_name":"is_a","term_name":"mastocytosis","termid":"MONDO:0007950"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"cutaneous mastocytosis","secondary_identifiers":["OMIM:154800","ONCOTREE:CMCD","SCTID:397012002","MEDGEN:210143","UMLS:C1136033","MESH:D034701","DOID:3663","GARD:7842","HP:0200151","NCIT:C7137","icd11.foundation:1300710062","EFO:1000886","ICDO:9740/1"],"synonyms":[{"name":"CM","type":"exact"},{"name":"CMCD","type":"related"},{"name":"cutaneous (skin) mastocytosis","type":"exact"},{"name":"cutaneous mastocytosis","type":"exact"},{"name":"cutaneous mastocytosis (disease)","type":"exact"},{"name":"mastocytosis, cutaneous","type":"exact"},{"name":"mastocytosis, systemic, somatic","type":"exact"}],"termid":"MONDO:0019023","xrefs":{"Monarch":{"xref_id":"0019023"}}}


id: GO:0070903
data:
  {"annotated_genes":["SJAG_00358","SJAG_00186"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96150,108838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"}]},"cv_name":"biological_process","definition":"The addition a sulfur atom to a nucleotide in a mitochondrial tRNA molecule.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA thio-modification","termid":"GO:0034227"},{"relation_name":"is_a","term_name":"mitochondrial tRNA modification","termid":"GO:0070900"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00186":null,"SJAG_00358":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0140053","GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mitochondrial tRNA thio-modification","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070903","terms_by_termid":{"GO:1990799":null}}


id: PBO:0072454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 18","termid":"PBO:0072454"}


id: GO:1990859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an endothelin stimulus. Endothelin is any of three secretory vasoconstrictive peptides (endothelin-1, -2, -3).","definition_xrefs":["PMID:16365184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"},{"relation_name":"is_a","term_name":"response to endothelin","termid":"GO:1990839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to endothelin","termid":"GO:1990859"}


id: PBO:0056164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAD2L1 divergent transcript","termid":"PBO:0056164"}


id: PBO:0081799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 728","termid":"PBO:0081799"}


id: MOD:00356
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(4a-FMN)-L-cysteine.","definition_xrefs":["RESID:AA0351","PubMed:12846567","Unimod:443#C","PubMed:12668455","PubMed:7692961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FMN modified residue","termid":"MOD:00896"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(4a-FMN)-L-cysteine","synonyms":[{"name":"(R)-2-amino-3-(4a-riboflavin 5'-dihydrogen phosphate)sulfanylpropanoic acid","type":"exact"},{"name":"4a-(S-cysteinyl)FMN","type":"exact"},{"name":"4a-(S-cysteinyl)flavin mononucleotide","type":"exact"},{"name":"FMNC","type":"related"},{"name":"MOD_RES S-4a-FMN cysteine","type":"exact"},{"name":"S-(4a-FMN)","type":"related"},{"name":"S-(4a-FMN)-L-cysteine","type":"exact"},{"name":"S4aFMNCys","type":"exact"}],"termid":"MOD:00356"}


id: PBO:0085546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; required for assembly and maturation of pre-40 S particles; homologous to mammalian ribosomal protein S19, no bacterial homolog; mutations in human RPS19 are associated with Diamond Blackfan anemia; RPS19A has a paralog, RPS19B, that arose from the whole genome duplication","termid":"PBO:0085546"}


id: GO:0003187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of the ventriculo bulbo valve is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve morphogenesis","termid":"GO:0003179"},{"relation_name":"part_of","term_name":"ventriculo bulbo valve development","termid":"GO:0003173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventriculo bulbo valve morphogenesis","termid":"GO:0003187"}


id: MONDO:1011000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syringomyelia that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syringomyelia, non-human animal","termid":"MONDO:1010236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syringomyelia, horse","secondary_identifiers":["OMIA:000965-9796"],"termid":"MONDO:1011000","xrefs":{"Monarch":{"xref_id":"1011000"}}}


id: GO:0090269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a fibroblast growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"fibroblast growth factor production","termid":"GO:0090269"}


id: GO:0050357
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: atropine + H2O = H+ + tropate + tropine.","definition_xrefs":["RHEA:23304","EC:3.1.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"tropinesterase activity","secondary_identifiers":["KEGG_REACTION:R03563","MetaCyc:TROPINESTERASE-RXN"],"synonyms":[{"name":"atropinase activity","type":"related"},{"name":"atropine acylhydrolase activity","type":"related"},{"name":"atropine esterase activity","type":"related"},{"name":"atropinesterase activity","type":"related"},{"name":"tropine esterase activity","type":"related"}],"termid":"GO:0050357"}


id: MONDO:1012499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"subclinical hypocalcemia, non-human animal","termid":"MONDO:1011720"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subclinical hypocalcemia, cattle","secondary_identifiers":["OMIA:002048-9913"],"termid":"MONDO:1012499","xrefs":{"Monarch":{"xref_id":"1012499"}}}


id: PBO:0026666
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multinucleate_multiseptate_cell","termid":"PBO:0026666"}


id: MONDO:0976124
data:
  {"annotated_genes":["SJAG_00609"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86886],"is_not":false,"summary":null,"term":"MONDO:0976124"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00609":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with polymicrogyria and seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:621021"],"termid":"MONDO:0976124","terms_by_termid":{"MONDO:0976124":null},"xrefs":{"Monarch":{"xref_id":"0976124"}}}


id: GO:2001124
data:
  {"annotated_genes":["SJAG_05000"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001125"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translational frameshifting.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational elongation","termid":"GO:0006448"},{"relation_name":"regulates","term_name":"translational frameshifting","termid":"GO:0006452"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translational frameshifting","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:2001124","terms_by_termid":{"GO:2001125":null}}


id: GO:1900788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pseurotin A.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pseurotin A metabolic process","synonyms":[{"name":"Pseurotin metabolic process","type":"related"},{"name":"Pseurotin metabolism","type":"related"},{"name":"pseurotin A metabolism","type":"exact"}],"termid":"GO:1900788"}


id: MONDO:0005835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant hereditary neoplastic syndrome characterized by the development of colorectal carcinoma and a high risk of developing endometrial carcinoma, gastric carcinoma, ovarian carcinoma, renal pelvis carcinoma, and small intestinal carcinoma. Patients often develop colorectal carcinomas at an early age (mean, 45 years). In the majority of the cases the lesions arise from the proximal colon. At the molecular level, high-frequency microsatellite instability is present.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary nonpolyposis colon cancer","termid":"MONDO:0018630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0000426"],"is_obsolete":false,"name":"Lynch syndrome","secondary_identifiers":["MedDRA:10051981","GARD:9905","MEDGEN:1633554","NORD:1386","SCTID:716318002","Orphanet:144","UMLS:C4552100","NCIT:C8494","DOID:3883"],"synonyms":[{"name":"HNPCC - hereditary nonpolyposis colon cancer","type":"broad"},{"name":"Hereditary colorectal endometrial cancer syndrome","type":"exact"},{"name":"Hereditary non-polyposis colon cancer (hMSH2, hMLH1, hPMS1, hPMS2)","type":"exact"},{"name":"Hereditary nonpolyposis colon cancer (hMSH2, hMLH1, hPMS1, hPMS2)","type":"exact"},{"name":"Lynch syndrome","type":"exact"},{"name":"familial non-polyposis colon cancer (hMSH2, hMLH1, hPMS1, hPMS2)","type":"exact"},{"name":"hereditary defective mismatch repair syndrome","type":"exact"},{"name":"hereditary non-polyposis colon cancer type 1","type":"exact"},{"name":"hereditary nonpolyposis colorectal cancer","type":"broad"},{"name":"hereditary nonpolyposis colorectal neoplasm","type":"broad"}],"termid":"MONDO:0005835","xrefs":{"Monarch":{"xref_id":"0005835"}}}


id: MONDO:1012894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neoplastic disease characterized by multiple organ hamartomas that occurs in pigs due to a mutation in the TSC1 gene created by genetic engineering or gene editing.","definition_xrefs":["PMID:33612456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberous sclerosis, TSC1-related, pig","secondary_identifiers":["OMIA:002427-9823"],"termid":"MONDO:1012894","xrefs":{"Monarch":{"xref_id":"1012894"}}}


id: PBO:0058069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4288","termid":"PBO:0058069"}


id: GO:0071515
data:
  {"annotated_genes":["SJAG_03997","SJAG_03097","SJAG_00399","SJAG_00073","SJAG_02401"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61250,95965,104890,110479],"is_not":false,"summary":null,"term":"GO:0071515"},{"annotations":[95235],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071171"}]},"cv_name":"biological_process","definition":"A genomic imprinting process in which a stable single-strand DNA lesion triggers programmed gene conversion at the mating-type locus, thereby restricting mating-type interconversion to one of the two sister chromatids during DNA replication.","definition_xrefs":["PMID:18723894","PMID:14765111","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process in single-celled organism","termid":"GO:0022413"},{"relation_name":"part_of","term_name":"mating type switching","termid":"GO:0007533"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00073":null,"SJAG_00399":null,"SJAG_02401":null,"SJAG_03097":null,"SJAG_03997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mating-type locus imprinting","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"genetic imprinting at mating-type locus","type":"exact"},{"name":"genomic imprinting at mating-type locus","type":"exact"},{"name":"mating type determination, imprinting","type":"exact"}],"termid":"GO:0071515","terms_by_termid":{"GO:0071171":null,"GO:0071515":null}}


id: GO:1902942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of voltage-gated chloride channel activity.","definition_xrefs":["GOC:als","PMID:22006324","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of voltage-gated chloride channel activity (obsolete GO:1902942)","synonyms":[{"name":"down regulation of voltage gated chloride channel activity","type":"exact"},{"name":"down regulation of voltage-dependent chloride channel activity","type":"exact"},{"name":"down regulation of voltage-gated chloride channel activity","type":"exact"},{"name":"down-regulation of voltage gated chloride channel activity","type":"exact"},{"name":"down-regulation of voltage-dependent chloride channel activity","type":"exact"},{"name":"down-regulation of voltage-gated chloride channel activity","type":"exact"},{"name":"downregulation of voltage gated chloride channel activity","type":"exact"},{"name":"downregulation of voltage-dependent chloride channel activity","type":"exact"},{"name":"downregulation of voltage-gated chloride channel activity","type":"exact"},{"name":"inhibition of voltage gated chloride channel activity","type":"narrow"},{"name":"inhibition of voltage-dependent chloride channel activity","type":"narrow"},{"name":"inhibition of voltage-gated chloride channel activity","type":"narrow"},{"name":"negative regulation of voltage gated chloride channel activity","type":"exact"},{"name":"negative regulation of voltage-dependent chloride channel activity","type":"exact"}],"termid":"GO:1902942"}


id: MONDO:0002117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant soft tissue neoplasm that occurs primarily in the pancreas.","definition_xrefs":["NCIT:C5715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant pancreatic neoplasm","termid":"MONDO:0009831"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pancreas sarcoma","secondary_identifiers":["DOID:1796","MEDGEN:202112","UMLS:C1096346"],"synonyms":[{"name":"pancreas sarcoma","type":"exact"},{"name":"pancreatic sarcoma","type":"exact"},{"name":"sarcoma of pancreas","type":"exact"},{"name":"sarcoma of the pancreas","type":"exact"}],"termid":"MONDO:0002117","xrefs":{"Monarch":{"xref_id":"0002117"}}}


id: MONDO:0017898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal recessive form of mendelian susceptibility to mycobacterial diseases due to a partial deficiency.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive mendelian susceptibility to mycobacterial diseases due to a partial deficiency (obsolete MONDO:0017898)","secondary_identifiers":["Orphanet:319539"],"synonyms":[{"name":"autosomal recessive MSMD due to a partial deficiency","type":"exact"},{"name":"mendelian susceptibility to mycobacterial diseases due to a partial deficiency, autosomal recessive","type":"exact"}],"termid":"MONDO:0017898","xrefs":{"Monarch":{"xref_id":"0017898"}}}


id: PBO:0090294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [4Fe-4S] cluster assembly and transfer protein Isa1","termid":"PBO:0090294"}


id: PBO:0016942
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Histone Deacetylase","termid":"PBO:0016942"}


id: MONDO:0005815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm with neuroendocrine differentiation that arises from the pancreas. It includes neuroendocrine tumors (low and intermediate grade) and neuroendocrine carcinomas (high grade).","definition_xrefs":["NCIT:C27031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine pancreas disorder","termid":"MONDO:0001933"},{"relation_name":"is_a","term_name":"pancreatic neoplasm","termid":"MONDO:0021040"},{"relation_name":"is_a","term_name":"digestive system neuroendocrine neoplasm","termid":"MONDO:0024503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic neuroendocrine neoplasm","secondary_identifiers":["ICDO:8150/1","UMLS:C5848399","icd11.foundation:1421495979","SCTID:254611009","DOID:1799","GARD:22052","Orphanet:506052","EFO:0007331","MEDGEN:1848937"],"synonyms":[{"name":"Islet cell tumors","type":"narrow"},{"name":"Islet cell tumours","type":"narrow"},{"name":"Islet of Langerhans tumor","type":"related"},{"name":"Islet of Langerhans tumour","type":"related"},{"name":"PNEN","type":"exact"},{"name":"endocrine pancreas cancer","type":"narrow"},{"name":"endocrine pancreas neoplasm","type":"exact"},{"name":"endocrine pancreas neoplasm (disease)","type":"exact"},{"name":"endocrine pancreas tumor","type":"exact"},{"name":"endocrine pancreas tumour","type":"exact"},{"name":"islet cell neoplasm","type":"narrow"},{"name":"islet cell tumor","type":"narrow"},{"name":"islet cell tumour","type":"narrow"},{"name":"malignant pancreatic endocrine tumor","type":"narrow"},{"name":"malignant pancreatic endocrine tumour","type":"narrow"},{"name":"malignant tumor of endocrine pancreas","type":"exact"},{"name":"malignant tumour of endocrine pancreas","type":"exact"},{"name":"neoplasm of endocrine pancreas","type":"exact"},{"name":"neuroendocrine neoplasm of pancreas","type":"related"},{"name":"pancreatic NEN","type":"exact"},{"name":"pancreatic endocrine neoplasm","type":"exact"},{"name":"pancreatic neuroendocrine neoplasm","type":"exact"},{"name":"tumor of endocrine pancreas","type":"exact"},{"name":"tumour of endocrine pancreas","type":"exact"}],"termid":"MONDO:0005815","xrefs":{"Monarch":{"xref_id":"0005815"}}}


id: PBO:0060628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCKAP5 antisense RNA 2","termid":"PBO:0060628"}


id: PR:Q9UT56
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2601 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S26-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC806.03c","synonyms":[{"name":"Spom972h-rps2601","type":"exact"}],"termid":"PR:Q9UT56"}


id: PBO:0087993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine dehydratase; required for the ct6A tRNA base modification, where an adenosine at position 37 is modified to form a cyclized active ester with an oxazolone ring; localized to the mitochondrial outer membrane; TCD2 has a paralog, TCD1, that arose from the whole genome duplication","termid":"PBO:0087993"}


id: GO:0000363
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the first transesterification reaction of U12-type spliceosomal mRNA splicing. The intron branch site adenosine is the nucleophile attacking the 5' splice site, resulting in cleavage at this position. In cis splicing, this is the step that forms a lariat structure of the intron RNA, which is still joined to the 3' exon. The catalytic site is thought to be formed by U6atac snRNA and/or U2atac snRNA, and/or associated proteins.","definition_xrefs":["GOC:krc","ISBN:0879695897"],"gene_count":0,"genotype_count":0,"name":"obsolete first U12-type spliceosomal transesterification activity (obsolete GO:0000363)","synonyms":[{"name":"first U12-type spliceosomal transesterification activity","type":"exact"},{"name":"lariat formation, 5'-splice site cleavage","type":"broad"}],"termid":"GO:0000363"}


id: PBO:0003508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin (predicted)","termid":"PBO:0003508"}


id: GO:0018105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine.","definition_xrefs":["RESID:AA0037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine phosphorylation","termid":"GO:0018105"}


id: PBO:0062605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily Q member 2 pseudogene","termid":"PBO:0062605"}


id: PBO:0077555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 262","termid":"PBO:0077555"}


id: MONDO:1010423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paroxysmal dyskinesia that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal dyskinesia, non-human animal","termid":"MONDO:1010004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paroxysmal dyskinesia, domestic cat","secondary_identifiers":["OMIA:001543-9685"],"termid":"MONDO:1010423","xrefs":{"Monarch":{"xref_id":"1010423"}}}


id: PBO:0030383
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-slow_vegetative_cell_population_growth","termid":"PBO:0030383"}


id: GO:0051788
data:
  {"annotated_genes":["SJAG_04567","SJAG_00219","SJAG_04612","SJAG_00270","SJAG_04187","SJAG_00552","SJAG_03657","SJAG_03815","SJAG_02419","SJAG_02341","SJAG_01737","SJAG_03345","SJAG_01160","SJAG_00173","SJAG_00054","SJAG_01556","SJAG_05022"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72627,106142,111982,114278,111981,89932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071218"},{"annotations":[112309,115615,111613,109968,111720],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071629"},{"annotations":[114975,89652,91130,105340],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180027"},{"annotations":[78326,112834],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071630"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a misfolded protein stimulus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to topologically incorrect protein","termid":"GO:0035966"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00173":null,"SJAG_00219":null,"SJAG_00270":null,"SJAG_00552":null,"SJAG_01160":null,"SJAG_01556":null,"SJAG_01737":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_03345":null,"SJAG_03657":null,"SJAG_03815":null,"SJAG_04187":null,"SJAG_04567":null,"SJAG_04612":null,"SJAG_05022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to misfolded protein","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0051788","terms_by_termid":{"GO:0071218":null,"GO:0071629":null,"GO:0071630":null,"GO:0180027":null}}


id: MONDO:0001439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"scleral disorder","termid":"MONDO:0001269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"episcleritis periodica fugax","secondary_identifiers":["MEDGEN:509926","UMLS:C0155351","icd11.foundation:2091821028","ICD9:379.01","SCTID:31166000","DOID:12124"],"termid":"MONDO:0001439","xrefs":{"Monarch":{"xref_id":"0001439"}}}


id: SO:0000268
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a proline anticodon, and a 3' proline binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"proline_tRNA_primary_transcript","termid":"SO:0000225"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl_tRNA","synonyms":[{"name":"prolyl tRNA","type":"exact"},{"name":"prolyl-transfer RNA","type":"exact"},{"name":"prolyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000268"}


id: PBO:0052918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-1","termid":"PBO:0052918"}


id: PBO:0005007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad16 homolog Rhp16","termid":"PBO:0005007"}


id: PBO:0028912
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_abnormal_septum","termid":"PBO:0028912"}


id: FYPO:0005578
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of intergenic meiotic recombination is normal (i.e. indistinguishable from wild type). Intergenic meiotic recombination reflects crossovers between homologous chromosomes.","definition_xrefs":["PomBase:mah","PMID:25579976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal intergenic meiotic recombination","synonyms":[{"name":"normal meiotic intergenic recombination","type":"exact"}],"termid":"FYPO:0005578"}


id: MONDO:0015769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy of the short arm of chromosome 6 is characterized by pre- and postnatal growth retardation, a pattern of specific facial features (mostly of the eyes), microcephaly, and developmental delay.","definition_xrefs":["Orphanet:1745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 6","termid":"MONDO:0016943"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 6p","secondary_identifiers":["MEDGEN:928220","UMLS:C4302551","SCTID:722430008","GARD:18745"],"synonyms":[{"name":"distal duplication 6p","type":"exact"},{"name":"distal trisomy type 6p","type":"exact"},{"name":"telomeric duplication 6p","type":"exact"},{"name":"trisomy 6pter","type":"exact"}],"termid":"MONDO:0015769","xrefs":{"Monarch":{"xref_id":"0015769"}}}


id: PBO:0041200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUD31 homolog","termid":"PBO:0041200"}


id: PBO:0006715
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condition","termid":"PBO:0006715"}


id: PBO:0082738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RSC chromatin remodeling complex; DNA-binding protein involved in the synthesis of rRNA and in transcriptional repression and activation of genes regulated by the Target of Rapamycin (TOR) pathway","termid":"PBO:0082738"}


id: GO:0033024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a mast cell, a cell that is found in almost all tissues containing numerous basophilic granules and capable of releasing large amounts of histamine and heparin upon activation.","definition_xrefs":["CL:0000097","PMID:16605130","GOC:mtg_apoptosis","GOC:add","PMID:12360215","PMID:11292031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell apoptotic process","termid":"GO:0033028"},{"relation_name":"is_a","term_name":"leukocyte apoptotic process","termid":"GO:0071887"},{"relation_name":"part_of","term_name":"mast cell homeostasis","termid":"GO:0033023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mast cell apoptotic process","synonyms":[{"name":"apoptosis of mast cells","type":"exact"},{"name":"mast cell apoptosis","type":"narrow"}],"termid":"GO:0033024"}


id: GO:0090483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylglycerol + phosphatidylethanolamine = cardiolipin + ethanolamine.","definition_xrefs":["PMID:22988102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidyltransferase activity","termid":"GO:0030572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0016740","GO:0016780","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphatidylglycerol-phosphatidylethanolamine phosphatidyltransferase activity","synonyms":[{"name":"cardiolipin synthase","type":"related"}],"termid":"GO:0090483"}


id: MONDO:0012314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any short QT syndrome in which the cause of the disease is a mutation in the KCNJ2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short QT syndrome","termid":"MONDO:0000453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"short QT syndrome type 3","secondary_identifiers":["UMLS:C1865018","OMIM:609622","MESH:C566504","GARD:18635","MEDGEN:400662"],"synonyms":[{"name":"KCNJ2 short QT syndrome","type":"exact"},{"name":"SQT3","type":"related"},{"name":"short QT syndrome 3","type":"related"},{"name":"short QT syndrome caused by mutation in KCNJ2","type":"exact"},{"name":"short QT syndrome type 3","type":"exact"}],"termid":"MONDO:0012314","xrefs":{"Monarch":{"xref_id":"0012314"}}}


id: MONDO:0006220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the gallbladder. It is composed entirely by malignant squamous epithelial cells.","definition_xrefs":["NCIT:C9170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder carcinoma","termid":"MONDO:0003220"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"gallbladder squamous cell carcinoma","secondary_identifiers":["EFO:1000267","UMLS:C0279658","DOID:5535","MEDGEN:83539"],"synonyms":[{"name":"epidermoid carcinoma of gallbladder","type":"exact"},{"name":"epidermoid carcinoma of the gallbladder","type":"exact"},{"name":"epidermoid gallbladder carcinoma","type":"exact"},{"name":"gall bladder squamous cell carcinoma","type":"exact"},{"name":"gallbladder squamous cell cancer","type":"exact"},{"name":"gallbladder squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of gallbladder","type":"exact"},{"name":"squamous cell carcinoma of the gallbladder","type":"exact"},{"name":"squamous cell gallbladder carcinoma","type":"exact"}],"termid":"MONDO:0006220","xrefs":{"Monarch":{"xref_id":"0006220"}}}


id: PBO:0045559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 8 pseudogene 5","termid":"PBO:0045559"}


id: PBO:0051329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-23 (pseudogene)","termid":"PBO:0051329"}


id: FYPO:0004212
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the kinetochore of a chromosome is decreased during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during meiosis","termid":"FYPO:0004762"},{"relation_name":"is_a","term_name":"decreased protein localization to centromere","termid":"FYPO:0006238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to kinetochore during meiosis I","synonyms":[{"name":"decreased protein localisation to kinetochore during meiosis I","type":"exact"},{"name":"decreased protein localization to kinetochore during first meiotic nuclear division","type":"exact"},{"name":"decreased protein localization to meiotic kinetochore during meiosis I","type":"exact"},{"name":"reduced protein localization to kinetochore during meiosis I","type":"exact"}],"termid":"FYPO:0004212"}


id: PBO:0076255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SV2C antisense RNA 1","termid":"PBO:0076255"}


id: GO:0010439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.","definition_xrefs":["PMID:17420480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"glucosinolate biosynthetic process","termid":"GO:0019761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of glucosinolate biosynthetic process","termid":"GO:0010439"}


id: GO:0050182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butanoyl-CoA + phosphate = butanoyl phosphate + CoA.","definition_xrefs":["RHEA:20892","EC:2.3.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"phosphate butyryltransferase activity","secondary_identifiers":["KEGG_REACTION:R01174","MetaCyc:PHOSPHATE-BUTYRYLTRANSFERASE-RXN"],"synonyms":[{"name":"butanoyl-CoA:phosphate butanoyltransferase activity","type":"related"},{"name":"phosphotransbutyrylase activity","type":"related"}],"termid":"GO:0050182"}


id: GO:0052829
data:
  {"annotated_genes":["SJAG_01702"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117548],"is_not":false,"summary":null,"term":"GO:0052829"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-myo-inositol 1,3,4-trisphosphate + H2O = myo-inositol 3,4-bisphosphate + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate phosphatase activity","termid":"GO:0046030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"inositol-1,3,4-trisphosphate 1-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1855232"],"termid":"GO:0052829","terms_by_termid":{"GO:0052829":null}}


id: FYPO:0000940
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000933"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"},{"relation_name":"is_a","term_name":"decreased protein localization to spindle pole body","termid":"FYPO:0002770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle pole body","synonyms":[{"name":"decreased protein localisation to mitotic spindle pole body","type":"exact"},{"name":"decreased protein localization to mitotic SPB","type":"exact"},{"name":"decreased protein localization to spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to spindle pole body during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitotic spindle pole body","type":"exact"}],"termid":"FYPO:0000940"}


id: MONDO:0800106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mental disorder that includes conduct disorder (CD), oppositional defiant disorder (ODD), and attention Deficit Hyperactivity Disorder (ADHD). Features may include frequent aggression, deceitfulness, and defiance, and often persist through the lifespan.","definition_xrefs":["PMID:28577605","PMID:24048954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mental disorder","termid":"MONDO:0005084"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disruptive behavior disorder","secondary_identifiers":["UMLS:C0012734","MEDGEN:41619","NCIT:C99753"],"synonyms":[{"name":"disruptive disorder","type":"exact"}],"termid":"MONDO:0800106","xrefs":{"Monarch":{"xref_id":"0800106"}}}


id: RO:0002430
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"involved_in_regulation_of","termid":"RO:0002428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_negative_regulation_of","termid":"RO:0002430"}


id: GO:1900925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycine import.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of glycine import across plasma membrane","termid":"GO:1900923"},{"relation_name":"positively_regulates","term_name":"glycine import across plasma membrane","termid":"GO:1903804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of glycine import across plasma membrane","synonyms":[{"name":"activation of glycine import","type":"narrow"},{"name":"positive regulation of glycine import","type":"broad"},{"name":"up regulation of glycine import","type":"exact"},{"name":"up-regulation of glycine import","type":"exact"},{"name":"upregulation of glycine import","type":"exact"}],"termid":"GO:1900925"}


id: PBO:0001929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinate phosphoribosyltransferase (predicted)","termid":"PBO:0001929"}


id: MONDO:1011827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital mast cell tumor, non-human animal","secondary_identifiers":["OMIA:002578"],"termid":"MONDO:1011827","xrefs":{"Monarch":{"xref_id":"1011827"}}}


id: PBO:0074277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIRP. pseudogene 1","termid":"PBO:0074277"}


id: MONDO:0020040
data:
  {"annotated_genes":["SJAG_04337","SJAG_00630"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009916"},{"annotations":[88040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010814"}]},"cv_name":"mondo","definition":"Differences of sex development in individuals with 46,XY karyotype.","definition_xrefs":["NCIT:C127171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of sexual differentiation","termid":"MONDO:0002145"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00630":null,"SJAG_04337":null},"genotype_count":0,"is_obsolete":false,"name":"46,XY disorder of sex development","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:8538","NANDO:2200393","MEDGEN:414114","Orphanet:98085","UMLS:C2751824","SCTID:8234004","MESH:D058490"],"synonyms":[{"name":"46, XY DSD","type":"related"},{"name":"46, XY disorders of sexual development","type":"related"},{"name":"46, XY female","type":"related"},{"name":"46,XY DSD","type":"exact"},{"name":"46,XY differences of Sex development","type":"exact"},{"name":"46,XY disorders of Sex development","type":"exact"},{"name":"XY female","type":"related"}],"termid":"MONDO:0020040","terms_by_termid":{"MONDO:0009916":null,"MONDO:0010814":null},"xrefs":{"Monarch":{"xref_id":"0020040"}}}


id: PBO:0056873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MHC class I polypeptide-related sequence C (pseudogene)","termid":"PBO:0056873"}


id: PBO:0026794
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_nuclear_periphery","termid":"PBO:0026794"}


id: PBO:0065784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine and serine rich 1","termid":"PBO:0065784"}


id: PBO:0027614
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vegetative_cell_phenotype_following_normal_mitosis","termid":"PBO:0027614"}


id: PBO:0063454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 11A","termid":"PBO:0063454"}


id: PBO:0072566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRBP1 pseudogene 1","termid":"PBO:0072566"}


id: PBO:0078366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 10-1","termid":"PBO:0078366"}


id: MONDO:0006234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"High grade prostatic intraepithelial neoplasia characterized by the presence of severe architectural and cytologic abnormalities.","definition_xrefs":["NCIT:C3642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"},{"relation_name":"is_a","term_name":"prostate carcinoma","termid":"MONDO:0005159"},{"relation_name":"is_a","term_name":"prostate intraepithelial neoplasia","termid":"MONDO:0005193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"grade III prostatic intraepithelial neoplasia","secondary_identifiers":["EFO:1000283","SCTID:92691004","ICD9:233.4","UMLS:C5200982","DOID:8634","ICD10CM:D07.5","MEDGEN:1684800"],"synonyms":[{"name":"PIN III","type":"exact"},{"name":"adenocarcinoma in situ of prostate","type":"exact"},{"name":"adenocarcinoma in situ of the prostate","type":"exact"},{"name":"carcinoma in situ of prostate","type":"exact"},{"name":"carcinoma in situ of prostate gland","type":"exact"},{"name":"grade 3 pin","type":"exact"},{"name":"grade 3 prostatic intraepithelial neoplasia","type":"exact"},{"name":"grade III pin","type":"exact"},{"name":"pin III","type":"exact"},{"name":"prostate adenocarcinoma in situ","type":"exact"},{"name":"prostate carcinoma in situ","type":"exact"},{"name":"prostate gland carcinoma in situ","type":"exact"},{"name":"prostate gland in situ carcinoma","type":"exact"},{"name":"stage 0 prostate gland carcinoma","type":"exact"}],"termid":"MONDO:0006234","xrefs":{"Monarch":{"xref_id":"0006234"}}}


id: MONDO:0015055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acquired angioedema type 2 (AAE2) is a type of acquired angioedema (AAE) characterized by acute edema in subcutaneous tissues, viscera and/or the upper airway.","definition_xrefs":["Orphanet:100055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired angioedema","termid":"MONDO:0019624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acquired angioedema type 2","secondary_identifiers":["GARD:19747","UMLS:C5680381","MEDGEN:1814461"],"synonyms":[{"name":"AAE 2","type":"exact"},{"name":"AAE II","type":"exact"},{"name":"acquired angioneurotic edema type 2","type":"exact"},{"name":"acquired angioneurotic oedema type 2","type":"exact"}],"termid":"MONDO:0015055","xrefs":{"Monarch":{"xref_id":"0015055"}}}


id: MONDO:0700296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by consuming food or feed contaminated with aflatoxins.","definition_xrefs":["PMID:32491713","MONDO:patterns/poisoning"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aflatoxicosis","termid":"MONDO:0700296","xrefs":{"Monarch":{"xref_id":"0700296"}}}


id: GO:0016999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms.","definition_xrefs":["GOC:cab2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antibiotic metabolic process","synonyms":[{"name":"antibiotic metabolism","type":"exact"}],"termid":"GO:0016999"}


id: PR:Q9UTC7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U4/U6 small nuclear ribonucleoprotein Prp4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR19846:SF0","OMA:SCHPO00203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C227.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.12","secondary_identifiers":["UniProtKB:Q9UTC7"],"synonyms":[{"name":"Spom972h-PRPF4","type":"exact"}],"termid":"PR:Q9UTC7"}


id: PBO:0003348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation dependent mannose-6-phosphate cargo receptor (predicted)","termid":"PBO:0003348"}


id: GO:0061279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells within a renal tubule that contributes to mesonephric distal tubule morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration involved in mesonephric nephron tubule morphogenesis","termid":"GO:0061278"},{"relation_name":"is_a","term_name":"epithelial cell migration involved in distal tubule morphogenesis","termid":"GO:0072157"},{"relation_name":"part_of","term_name":"mesonephric distal tubule morphogenesis","termid":"GO:0061273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell migration involved in mesonephric distal tubule morphogenesis","termid":"GO:0061279"}


id: GO:0005114
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type II transforming growth factor beta receptor.","definition_xrefs":["PMID:11252892","GOC:ceb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transforming growth factor beta receptor binding","termid":"GO:0005160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type II transforming growth factor beta receptor binding","synonyms":[{"name":"TGF-beta type II binding","type":"exact"},{"name":"punt binding","type":"narrow"},{"name":"punt ligand","type":"narrow"},{"name":"transforming growth factor beta ligand binding to type II receptor","type":"related"},{"name":"transforming growth factor beta receptor type II binding","type":"exact"},{"name":"type II TGF-beta binding","type":"exact"}],"termid":"GO:0005114"}


id: SO:0001383
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the nucleotide molecule, interacts selectively and non-covalently with polypeptide residues of a histone.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_to_protein_binding_site","termid":"SO:0001654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone_binding_site","synonyms":[{"name":"histone binding site","type":"exact"}],"termid":"SO:0001383"}


id: PBO:0072673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA transcription, translation and transport factor","termid":"PBO:0072673"}


id: PBO:0042806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide kinase like","termid":"PBO:0042806"}


id: PR:P78954
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tif45 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.15","synonyms":[{"name":"Spom972h-tif45","type":"exact"},{"name":"eIF-4E-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF-4F 25 kDa subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF4E-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mRNA cap-binding protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78954"}


id: PBO:0049944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIC ZBTB transcriptional repressor 2","termid":"PBO:0049944"}


id: PBO:0055421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2851","termid":"PBO:0055421"}


id: PBO:0072623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial spoke head 10 homolog B","termid":"PBO:0072623"}


id: PBO:0058815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7973-1","termid":"PBO:0058815"}


id: MONDO:0003665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cervical adenocarcinoma with the histologic characteristics of the endometrioid adenocarcinoma of the endometrium.","definition_xrefs":["NCIT:C6343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrioid adenocarcinoma","termid":"MONDO:0005026"},{"relation_name":"is_a","term_name":"cervical adenocarcinoma","termid":"MONDO:0005153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical endometrioid adenocarcinoma","secondary_identifiers":["UMLS:C1332913","DOID:5830","MEDGEN:272450","ONCOTREE:CEEN","EFO:1000164"],"synonyms":[{"name":"cervical endometrioid adenocarcinoma","type":"exact"},{"name":"cervical endometrioid carcinoma","type":"exact"},{"name":"cervix endometrioid adenocarcinoma","type":"exact"},{"name":"cervix endometrioid carcinoma","type":"exact"},{"name":"cervix uteri endometrioid adenocarcinoma","type":"exact"},{"name":"cervix uteri endometrioid carcinoma","type":"exact"},{"name":"endometrioid adenocarcinoma of cervix","type":"exact"},{"name":"endometrioid adenocarcinoma of cervix uteri","type":"exact"},{"name":"endometrioid adenocarcinoma of the cervix","type":"exact"},{"name":"endometrioid adenocarcinoma of the cervix uteri","type":"exact"},{"name":"endometrioid adenocarcinoma of the uterine cervix","type":"exact"},{"name":"endometrioid adenocarcinoma of uterine cervix","type":"exact"},{"name":"endometrioid carcinoma of cervix","type":"exact"},{"name":"endometrioid carcinoma of cervix uteri","type":"exact"},{"name":"endometrioid carcinoma of the cervix","type":"exact"},{"name":"endometrioid carcinoma of the cervix uteri","type":"exact"},{"name":"endometrioid carcinoma of the uterine cervix","type":"exact"},{"name":"endometrioid carcinoma of uterine cervix","type":"exact"},{"name":"uterine cervix endometrioid adenocarcinoma","type":"exact"},{"name":"uterine cervix endometrioid carcinoma","type":"exact"}],"termid":"MONDO:0003665","xrefs":{"Monarch":{"xref_id":"0003665"}}}


id: GO:0042670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a retinal cone cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"camera-type eye photoreceptor cell differentiation","termid":"GO:0060219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal cone cell differentiation","termid":"GO:0042670"}


id: PBO:0018241
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"provides a telomeric cap that prevents Ku from recognising telomeres as double strand breaks (Ku-dependent end-to-end fusions)","termid":"PBO:0018241"}


id: GO:1903345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein polyglycylation.","definition_xrefs":["GOC:sart","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of protein polyglycylation","termid":"GO:1903344"},{"relation_name":"negatively_regulates","term_name":"protein polyglycylation","termid":"GO:0018094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein polyglycylation","synonyms":[{"name":"down regulation of protein polyglycylation","type":"exact"},{"name":"down-regulation of protein polyglycylation","type":"exact"},{"name":"downregulation of protein polyglycylation","type":"exact"},{"name":"inhibition of protein polyglycylation","type":"narrow"}],"termid":"GO:1903345"}


id: MONDO:1012859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrophic cardiomyopathy that occurs in cats due to a mutation in the ALMS1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, domestic cat","termid":"MONDO:1010459"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic cardiomyopathy, ALMS1-related, domestic cat","secondary_identifiers":["OMIA:002316-9685"],"synonyms":[{"name":"cardiomyopathy, hypertrophic, ALMS1-related, domestic cat","type":"exact"}],"termid":"MONDO:1012859","xrefs":{"Monarch":{"xref_id":"1012859"}}}


id: PBO:0003377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane proteolipid Pmp3","termid":"PBO:0003377"}


id: PBO:0047167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM193B divergent transcript","termid":"PBO:0047167"}


id: PR:O74326
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cid11 gene.","definition_xrefs":["UniProtKB:O74326","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) RNA polymerase cid11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.06","synonyms":[{"name":"PAP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cid11","type":"exact"},{"name":"caffeine-induced death protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"polynucleotide adenylyltransferase cid11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74326"}


id: PATO:0001914
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physiological state which is characterized by normal electrical activity in neuronal tissue.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physiological state","termid":"PATO:0001912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-ictal","termid":"PATO:0001914"}


id: PBO:0086514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; large-scale analyses show mRNA expression increases under anaerobic conditions and two-hybrid interactions with Sst2p","termid":"PBO:0086514"}


id: MONDO:0010024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Short rib-polydactyly syndrome (SRPS), Beemer-Langer type is an extremely rare type of SRPS developing prenatally or immediately after birth and characterized by short and narrow thorax with horizontally oriented ribs. Other bone features include small iliac bones, short tubular bones, bowing of long bones and rarely pre- and post-axial polydactyly. Brain defects are common and some cases of cleft lip, absent internal genitalia and renal, biliary and pancreatic cysts have been reported. The course is rapidly fatal.","definition_xrefs":["Orphanet:93268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Beemer-Langer syndrome","secondary_identifiers":["ICD9:756.9","OMIM:269860","GARD:4832","MEDGEN:96578","MESH:C537599","SCTID:254052001","UMLS:C0432198","DOID:9249"],"synonyms":[{"name":"Beemer Langer syndrome","type":"related"},{"name":"Beemer-Langer syndrome","type":"exact"},{"name":"SRPS type 4","type":"related"},{"name":"SRTD12","type":"related"},{"name":"Srps 4","type":"related"},{"name":"short rib polydactyly syndrome Beemer-Langer type","type":"related"},{"name":"short rib syndrome, Beemer type","type":"related"},{"name":"short rib-polydactyly syndrome Beemer type","type":"related"},{"name":"short rib-polydactyly syndrome type 4","type":"exact"},{"name":"short rib-polydactyly syndrome type IV","type":"related"},{"name":"short rib-polydactyly syndrome, Beemer-Langer type","type":"related"},{"name":"short rib-polydactyly syndrome, type 4","type":"related"},{"name":"short-rib thoracic dysplasia 12","type":"related"},{"name":"type IV short rib polydactyly syndrome","type":"exact"}],"termid":"MONDO:0010024","xrefs":{"Monarch":{"xref_id":"0010024"}}}


id: PBO:0003108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L37a (predicted)","termid":"PBO:0003108"}


id: PBO:0079381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta class I","termid":"PBO:0079381"}


id: PATO:0002102
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a cell that arises by virtue of whether the bearer exhibits the ability to grow and proliferate in number through cell division.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular quality","termid":"PATO:0001396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferative","termid":"PATO:0002102"}


id: MONDO:0800392
data:
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id: PBO:0070644
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id: GO:0080005
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id: GO:0016271
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id: FYPO:0000804
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id: PBO:0079060
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id: PBO:0091124
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id: MONDO:0005027
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id: PBO:0038448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanyl-tRNA synthetase 1","termid":"PBO:0038448"}


id: GO:0019352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of protoporphyrinogen IX from other compounds, including glycine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine metabolic process","termid":"GO:0006544"},{"relation_name":"is_a","term_name":"protoporphyrinogen IX biosynthetic process","termid":"GO:0006782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0033013","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"protoporphyrinogen IX biosynthetic process from glycine","synonyms":[{"name":"protoporphyrinogen IX anabolism from glycine","type":"exact"},{"name":"protoporphyrinogen IX formation from glycine","type":"exact"},{"name":"protoporphyrinogen IX synthesis from glycine","type":"exact"}],"termid":"GO:0019352"}


id: SO:0001346
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_2_prime_O_dimethyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_two_prime_O_dimethyluridine","secondary_identifiers":["RNAMOD:054"],"synonyms":[{"name":"5,2'-O-dimethyluridine","type":"exact"},{"name":"five two prime O dimethyluridine","type":"exact"},{"name":"m5Um","type":"exact"}],"termid":"SO:0001346"}


id: PBO:0080336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 100 pseudogene","termid":"PBO:0080336"}


id: GO:0005188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete larval serum protein (sensu Insecta) (obsolete GO:0005188)","synonyms":[{"name":"arylphorin","type":"narrow"},{"name":"larval serum protein (sensu Insecta)","type":"exact"}],"termid":"GO:0005188"}


id: GO:0002557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of histamine by a basophil or group of basophils.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histamine secretion involved in inflammatory response","termid":"GO:0002441"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"basophil degranulation","termid":"GO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"histamine secretion by basophil","termid":"GO:0002557"}


id: PBO:0087987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA:pseudouridine synthase; introduces pseudouridines at position 38 or 39 in tRNA; also responsible for pseudouracil modification of some mRNAs; important for maintenance of translation efficiency and normal cell growth, localizes to both the nucleus and cytoplasm; non-essential for viability","termid":"PBO:0087987"}


id: FYPO:0005205
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the rate or occurrence of DNA polymerase processivity factor activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA polymerase processivity factor activity","termid":"FYPO:0004499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"increased DNA polymerase processivity factor activity","termid":"FYPO:0005205"}


id: PBO:0075667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase long chain base subunit 1 pseudogene 2","termid":"PBO:0075667"}


id: GO:2000995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellodextrin metabolic process","termid":"GO:2000925"},{"relation_name":"is_a","term_name":"negative regulation of cell wall polysaccharide catabolic process","termid":"GO:2000967"},{"relation_name":"is_a","term_name":"regulation of mannan catabolic process","termid":"GO:2000994"},{"relation_name":"negatively_regulates","term_name":"mannan catabolic process","termid":"GO:0046355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mannan catabolic process","synonyms":[{"name":"negative regulation of mannan breakdown","type":"exact"},{"name":"negative regulation of mannan catabolism","type":"exact"},{"name":"negative regulation of mannan degradation","type":"exact"}],"termid":"GO:2000995"}


id: GO:2000794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial cell proliferation involved in lung morphogenesis.","definition_xrefs":["PMID:21513708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"epithelial cell proliferation involved in lung morphogenesis","termid":"GO:0060502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell proliferation involved in lung morphogenesis","termid":"GO:2000794"}


id: PBO:0090330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxycytidylate deaminase","termid":"PBO:0090330"}


id: RO:HOM0000049
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paralogy that involves genes from the same species.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_paralogy_relationship_with","termid":"RO:HOM0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_within-species_paralogy_relationship_with","synonyms":[{"name":"within-species paralogous to","type":"exact"}],"termid":"RO:HOM0000049"}


id: PBO:0049426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 3","termid":"PBO:0049426"}


id: PBO:0061374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 34","termid":"PBO:0061374"}


id: PR:Q10167
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC26A3.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C26A3.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.14c","synonyms":[{"name":"Spom972h-SPAC26A3.14c","type":"exact"}],"termid":"PR:Q10167"}


id: GO:1900662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of emericellamide A biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of emericellamide biosynthetic process","termid":"GO:1900659"},{"relation_name":"is_a","term_name":"regulation of emericellamide A biosynthetic process","termid":"GO:1900661"},{"relation_name":"negatively_regulates","term_name":"emericellamide A biosynthetic process","termid":"GO:1900617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of emericellamide A biosynthetic process","synonyms":[{"name":"down regulation of emericellamide A anabolism","type":"exact"},{"name":"down regulation of emericellamide A biosynthesis","type":"exact"},{"name":"down regulation of emericellamide A biosynthetic process","type":"exact"},{"name":"down regulation of emericellamide A formation","type":"exact"},{"name":"down regulation of emericellamide A synthesis","type":"exact"},{"name":"down-regulation of emericellamide A anabolism","type":"exact"},{"name":"down-regulation of emericellamide A biosynthesis","type":"exact"},{"name":"down-regulation of emericellamide A biosynthetic process","type":"exact"},{"name":"down-regulation of emericellamide A formation","type":"exact"},{"name":"down-regulation of emericellamide A synthesis","type":"exact"},{"name":"downregulation of emericellamide A anabolism","type":"exact"},{"name":"downregulation of emericellamide A biosynthesis","type":"exact"},{"name":"downregulation of emericellamide A biosynthetic process","type":"exact"},{"name":"downregulation of emericellamide A formation","type":"exact"},{"name":"downregulation of emericellamide A synthesis","type":"exact"},{"name":"inhibition of emericellamide A anabolism","type":"exact"},{"name":"inhibition of emericellamide A biosynthesis","type":"exact"},{"name":"inhibition of emericellamide A biosynthetic process","type":"narrow"},{"name":"inhibition of emericellamide A formation","type":"exact"},{"name":"inhibition of emericellamide A synthesis","type":"exact"},{"name":"negative regulation of emericellamide A anabolism","type":"exact"},{"name":"negative regulation of emericellamide A biosynthesis","type":"exact"},{"name":"negative regulation of emericellamide A formation","type":"exact"},{"name":"negative regulation of emericellamide A synthesis","type":"exact"}],"termid":"GO:1900662"}


id: PBO:0016990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NADH dehydrogenase (ubiquinone) Nde1 (predicted)","termid":"PBO:0016990"}


id: PBO:0055298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2725","termid":"PBO:0055298"}


id: GO:0033723
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fluoroacetaldehyde + NAD+ + H2O = fluoroacetate + NADH + 2 H+.","definition_xrefs":["EC:1.2.1.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"fluoroacetaldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["RHEA:16677"],"synonyms":[{"name":"fluoroacetaldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0033723"}


id: GO:0071964
data:
  {"annotated_genes":["SJAG_02536","SJAG_04522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109571,118592],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2000784"}]},"cv_name":"biological_process","definition":"Any cellular process that results in the specification or formation of a polarized intracellular organization or cell growth pattern that regulates the shape of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of cell polarity","termid":"GO:0030010"},{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity regulating cell shape","termid":"GO:0071963"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02536":null,"SJAG_04522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071964","terms_by_termid":{"GO:2000784":null}}


id: PBO:0064578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member A","termid":"PBO:0064578"}


id: GO:0097252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in an oligodendrocyte. Oligodendrocytes belong to a class of large neuroglial (macroglial) cells in the central nervous system, where they form the insulating myelin sheath of axons.","definition_xrefs":["CL:0000128","GOC:mtg_apoptosis","PMID:16723520","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell apoptotic process","termid":"GO:0034349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oligodendrocyte apoptotic process","synonyms":[{"name":"oligodendrocyte apoptosis","type":"narrow"}],"termid":"GO:0097252"}


id: MONDO:0010411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited hypertrophic pyloric stenosis","termid":"MONDO:0100239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pyloric stenosis, infantile hypertrophic, 4","secondary_identifiers":["OMIM:300711","MEDGEN:395521","MESH:C567472","UMLS:C2678037"],"synonyms":[{"name":"IHPS4","type":"exact"},{"name":"pyloric stenosis, infantile hypertrophic, 4","type":"exact"}],"termid":"MONDO:0010411","xrefs":{"Monarch":{"xref_id":"0010411"}}}


id: PR:Q9HDV4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysine-specific demethylase 5A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lid2 complex component lid2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP19A11.06","secondary_identifiers":["UniProtKB:Q9HDV4"],"synonyms":[{"name":"Lid2C component lid2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBP19A11.06","type":"related"},{"name":"Spom972h-KDM5A","type":"exact"}],"termid":"PR:Q9HDV4"}


id: GO:0170067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of arginine (2-amino-5-guanidinopentanoic acid) via the intermediate compound N-acetyl-L-citrulline.","definition_xrefs":["PMID:16585758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-arginine biosynthetic process","termid":"GO:0006526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-arginine biosynthetic process via N-acetyl-L-citrulline","secondary_identifiers":["MetaCyc:PWY-5154"],"synonyms":[{"name":"arginine biosynthesis via N-acetyl intermediates","type":"exact"},{"name":"arginine biosynthesis, N-acetylated pathway","type":"exact"}],"termid":"GO:0170067"}


id: GO:2001058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a D-tagatose 6-phosphate.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"D-tagatose 6-phosphate metabolic process","synonyms":[{"name":"D-tagatose 6-phosphate metabolism","type":"exact"}],"termid":"GO:2001058"}


id: SO:0001694
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A restriction enzyme cleavage site whereby only one strand is cut.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction_enzyme_cleavage_junction","termid":"SO:0001688"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single_strand_restriction_enzyme_cleavage_site","synonyms":[{"name":"single strand restriction enzyme cleavage site","type":"related"}],"termid":"SO:0001694"}


id: GO:0035350
data:
  {"annotated_genes":["SJAG_03503"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990548"}]},"cv_name":"biological_process","definition":"The process in which flavin-adenine dinucleotide (FAD) is transported across a membrane. FAD forms the coenzyme of the prosthetic group of various flavoprotein oxidoreductase enzymes, in which it functions as an electron acceptor by being reversibly converted to its reduced form.","definition_xrefs":["ISBN:0198506732","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD transport","termid":"GO:0015883"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03503":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"FAD transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"FAD membrane transport","type":"exact"}],"termid":"GO:0035350","terms_by_termid":{"GO:1990548":null}}


id: GO:0006074
data:
  {"annotated_genes":["SJAG_04462","SJAG_04483","SJAG_03705","SJAG_03587","SJAG_04771","SJAG_04668","SJAG_01835","SJAG_00218","SJAG_04666","SJAG_02222","SJAG_01288","SJAG_01787","SJAG_00876","SJAG_00610","SJAG_01255","SJAG_01290","SJAG_05285","SJAG_04659"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[74762,108058,72816,115155,117822,76281,93480,77632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[89369,94302],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[107293,119921,94286,92643,107867,69405,120054],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"(1->3)-beta-D-glucan metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"1,3-beta-D-glucan metabolic process","type":"broad"},{"name":"1,3-beta-D-glucan metabolism","type":"exact"},{"name":"1,3-beta-glucan metabolic process","type":"broad"},{"name":"beta-1,3 glucan metabolic process","type":"exact"},{"name":"beta-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0006074","terms_by_termid":{"GO:0034413":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:0015126
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The directed movement of bile acid and bile salts out of a hepatocyte and into the bile canaliculus by means of an agent such as a transporter or pore. Bile canaliculi are the thin tubes formed by hepatocyte membranes. Bile acids are any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile acid transmembrane transporter activity","termid":"GO:0015125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"canalicular bile acid transmembrane transporter activity","termid":"GO:0015126"}


id: MONDO:0010481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Swelling involving the deep dermis, subcutaneous, or submucosal tissues, representing localized edema. Angioedema often occurs in the face, lips, tongue, and larynx.","definition_xrefs":["MESH:D000799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urticaria","termid":"MONDO:0005492"},{"relation_name":"is_a","term_name":"skin vascular disease","termid":"MONDO:0019293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"angioedema","secondary_identifiers":["UMLS:C0002994","DOID:1558","HP:0100665","CSP:2716-7007","EFO:0005532","SCTID:400075008","MEDGEN:1543","ICD9:995.1"],"synonyms":[{"name":"Edemas, angioneurotic","type":"exact"},{"name":"Quincke edema","type":"exact"},{"name":"Quincke oedema","type":"exact"},{"name":"Quincke's edema","type":"exact"},{"name":"Quincke's oedema","type":"exact"},{"name":"Quinckes edema","type":"exact"},{"name":"Quinckes oedema","type":"exact"},{"name":"Urticarias, giant","type":"exact"},{"name":"angioedemas","type":"exact"},{"name":"angioneurotic Edemas","type":"exact"},{"name":"angioneurotic edema","type":"narrow"},{"name":"angioneurotic oedema","type":"narrow"},{"name":"edema, Quincke's","type":"exact"},{"name":"edema, angioneurotic","type":"exact"},{"name":"giant Urticarias","type":"exact"},{"name":"giant urticaria","type":"exact"},{"name":"urticaria, giant","type":"exact"}],"termid":"MONDO:0010481","xrefs":{"Monarch":{"xref_id":"0010481"}}}


id: GO:0043985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by addition of a methyl group to arginine at position 3 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-R3 methylation (obsolete GO:0043985)","synonyms":[{"name":"histone H4 R3 methylation","type":"exact"},{"name":"histone H4 methylation at R3","type":"exact"},{"name":"histone H4R3me","type":"exact"}],"termid":"GO:0043985"}


id: FYPO:0008161
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 16 of histone H4 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:18344406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone acetylation during vegetative growth","termid":"FYPO:0003221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal histone H4-K16 acetylation during vegetative growth","termid":"FYPO:0008161"}


id: PBO:0002857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Srb6","termid":"PBO:0002857"}


id: GO:0032441
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pheophorbide a + reduced ferredoxin + 2 O2 = red chlorophyll catabolite + oxidized ferredoxin + H2O.","definition_xrefs":["PMID:14657372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on iron-sulfur proteins as donors","termid":"GO:0016730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"pheophorbide a oxygenase activity","secondary_identifiers":["MetaCyc:RXN-7740","EC:1.14.15.17","RHEA:48140"],"termid":"GO:0032441"}


id: PBO:0050136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 46","termid":"PBO:0050136"}


id: GO:1905328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a septum over time, from its formation to the mature structure.","definition_xrefs":["GO_REF:0000080","GOC:TermGenie","PMID:4562349","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant septum development","synonyms":[{"name":"dissepiment development","type":"broad"}],"termid":"GO:1905328"}


id: PBO:0035886
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_microtubule-based_movement","termid":"PBO:0035886"}


id: PBO:0027513
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_carbendazim","termid":"PBO:0027513"}


id: PBO:0061956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 12","termid":"PBO:0061956"}


id: PR:O42899
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein SCO1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02563","PRO:DNx","PANTHER:PTHR12151:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sco1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.06","secondary_identifiers":["UniProtKB:O42899"],"synonyms":[{"name":"Spom972h-SCO1","type":"exact"}],"termid":"PR:O42899"}


id: PBO:0029523
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_septated_spheroid_vegetative_cell","termid":"PBO:0029523"}


id: SO:0001518
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inversion event that includes the centromere.","direct_ancestors":[{"relation_name":"is_a","term_name":"inversion_attribute","termid":"SO:0001517"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pericentric","termid":"SO:0001518"}


id: PBO:0030170
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_strand_displacement","termid":"PBO:0030170"}


id: PBO:0042890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP418 antisense RNA 1","termid":"PBO:0042890"}


id: PBO:0029509
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_spore_population_(obsolete_FYPO:0002206)","termid":"PBO:0029509"}


id: GO:1905031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of membrane repolarization during cardiac muscle cell action potential.","definition_xrefs":["GOC:rph","GOC:TermGenie","GOC:BHF","PMID:23157812","GOC:mtg_cardiac_conduct_nov11","GO_REF:0000058","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane repolarization during action potential","termid":"GO:0098903"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell membrane repolarization","termid":"GO:0099623"},{"relation_name":"regulates","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane repolarization during cardiac muscle cell action potential","termid":"GO:1905031"}


id: FYPO:0003869
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in which the amount of protein encoded by genes normally induced by exposure to hydrogen peroxide measured in a cell is higher than normal when the cell is in G0 phase.","definition_xrefs":["PMID:20133687","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during G0","termid":"FYPO:0003866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased level of hydrogen peroxide-induced proteins during G0","synonyms":[{"name":"increased level of H2O2-induced proteins during G0","type":"exact"},{"name":"increased level of hydrogen peroxide-induced proteins during cell quiescence","type":"exact"},{"name":"increased level of hydrogen peroxide-induced proteins during quiescence","type":"exact"},{"name":"increased level of proteins expressed during cellular response to hydrogen peroxide during G0","type":"exact"},{"name":"increased level of proteins induced by hydrogen peroxide during G0","type":"exact"},{"name":"increased protein level of genes (normally) induced during H2O2 stress during G0","type":"exact"}],"termid":"FYPO:0003869"}


id: GO:0009771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Energized reaction-center P680 chlorophylls on photosystem II donate an electron to a loosely bound acceptor molecule, the quinone Q, on the stromal surface of the thylakoid membrane. The result is charge separation; a negative charge on the stromal side of the thylakoid membrane and a positive charge on the luminal side.","definition_xrefs":["ISBN:0816017360","GOC:jid","ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete primary charge separation in photosystem II (obsolete GO:0009771)","termid":"GO:0009771"}


id: PBO:0038407
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_regulates_activity_of","termid":"PBO:0038407"}


id: PBO:0076943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCF3 fusion partner","termid":"PBO:0076943"}


id: PBO:0054099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1455","termid":"PBO:0054099"}


id: PBO:0076753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teratocarcinoma-derived growth factor 1 pseudogene 3","termid":"PBO:0076753"}


id: PBO:0074284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT3 antisense RNA 1","termid":"PBO:0074284"}


id: PBO:0050630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor 5","termid":"PBO:0050630"}


id: PBO:0047579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor 2","termid":"PBO:0047579"}


id: MONDO:0035410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated congenital hypoglossia/aglossia","termid":"MONDO:0013003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"isolated congenital aglossia","secondary_identifiers":["ICD10CM:Q38.3","Orphanet:563951","GARD:22263"],"termid":"MONDO:0035410","xrefs":{"Monarch":{"xref_id":"0035410"}}}


id: PBO:0017957
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wilson disease","termid":"PBO:0017957"}


id: PBO:0078748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 10B pseudogene 1","termid":"PBO:0078748"}


id: PBO:0043365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin heavy chain","termid":"PBO:0043365"}


id: PBO:0004475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATP-dependent DNA helicase Irc3 (predicted)","termid":"PBO:0004475"}


id: PR:Q9P7F9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctr5 gene.","definition_xrefs":["UniProtKB:Q9P7F9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper transport protein ctr5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1142.05","synonyms":[{"name":"Spom972h-ctr5","type":"exact"},{"name":"copper transporter 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7F9"}


id: PBO:0060647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 5 like, pseudogene","termid":"PBO:0060647"}


id: PBO:0113059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of small ribosomal subunit (SSU) processome; interacts with the U3 snoRNA (Snr17a/b); involved in rRNA processing and maturation; required post-transcriptionally for efficient retrotransposition; absence results in decreased Ty1 Gag:GFP protein levels; originally isolated as bud-site selection mutant that displays a random budding pattern; ortholog of human NOL7","termid":"PBO:0113059"}


id: GO:0046406
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Mg-protoporphyrin IX + S-adenosyl-L-methionine = Mg-protoporphyrin IX 13-monomethyl ester + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:17809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"magnesium protoporphyrin IX methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN","KEGG_REACTION:R04237","EC:2.1.1.11"],"synonyms":[{"name":"(-)-S-adenosyl-L-methionine:magnesium-protoporphyrin IX methyltransferase activity","type":"related"},{"name":"Mg-protoporphyrin IX methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:Mg protoporphyrin methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:magnesium-protoporphyrin O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:magnesium-protoporphyrin-IX O-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine-magnesium protoporphyrin methyltransferase activity","type":"related"},{"name":"S-adenosylmethioninemagnesium protoporphyrin methyltransferase activity","type":"related"},{"name":"magnesium-protoporphyrin O-methyltransferase activity","type":"exact"}],"termid":"GO:0046406"}


id: PBO:0039237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-aminolevulinate synthase 2","termid":"PBO:0039237"}


id: PBO:0054126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1492","termid":"PBO:0054126"}


id: MONDO:0006434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Subependymoma (obsolete MONDO:0006434)","termid":"MONDO:0006434","xrefs":{"Monarch":{"xref_id":"0006434"}}}


id: GO:0002395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response taking place in the nasopharyngeal-associated lymphoid tissue (NALT). NALT includes the tonsils and adenoids.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response in gut-associated lymphoid tissue","termid":"GO:0002387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune response in nasopharyngeal-associated lymphoid tissue","synonyms":[{"name":"immune response in NALT","type":"exact"}],"termid":"GO:0002395"}


id: PBO:0077210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 9 superfamily member 1","termid":"PBO:0077210"}


id: GO:0019402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactitol, the hexitol derived by the reduction of the aldehyde group of either D- or L-galactose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexitol metabolic process","termid":"GO:0006059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"galactitol metabolic process","synonyms":[{"name":"galactitol metabolism","type":"exact"}],"termid":"GO:0019402"}


id: PBO:0041195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUB3 mitotic checkpoint protein pseudogene 1","termid":"PBO:0041195"}


id: GO:0046527
data:
  {"annotated_genes":["SJAG_00394","SJAG_03587","SJAG_01531","SJAG_03656","SJAG_04571","SJAG_00129","SJAG_02222","SJAG_01288","SJAG_00876","SJAG_01427","SJAG_04236","SJAG_05285","SJAG_01950","SJAG_03764"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81793,77611,76548,115156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003843"},{"annotations":[95228,102986,80629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003825"},{"annotations":[119804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033840"},{"annotations":[117825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140752"},{"annotations":[81802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042283"},{"annotations":[70731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106073"},{"annotations":[78994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042281"},{"annotations":[68165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004581"},{"annotations":[81324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003980"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a glucosyl group to an acceptor molecule, typically another carbohydrate or a lipid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00394":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01950":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_03656":null,"SJAG_03764":null,"SJAG_04236":null,"SJAG_04571":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0046527","terms_by_termid":{"GO:0003825":null,"GO:0003843":null,"GO:0003980":null,"GO:0004581":null,"GO:0033840":null,"GO:0042281":null,"GO:0042283":null,"GO:0106073":null,"GO:0140752":null}}


id: PBO:0039896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho/Rac guanine nucleotide exchange factor 2","termid":"PBO:0039896"}


id: MOD:02017
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino group with an arachidonoylamino group.","direct_ancestors":[{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"},{"relation_name":"is_a","term_name":"arachidonoylated residue","termid":"MOD:02018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"N-arachidonoylated residue","termid":"MOD:02017"}


id: GO:1990280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which RNA is transported to and maintained in a part of a chromosome that is organized into chromatin.","definition_xrefs":["PMID:22582262","GOC:dos","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization","termid":"GO:0006403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"RNA localization to chromatin","synonyms":[{"name":"RNA localisation to chromatin","type":"exact"}],"termid":"GO:1990280"}


id: MONDO:0006267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma with cavernous vascular spaces arising from the liver. It is the most frequent benign tumor of the liver and usually affects young females.","definition_xrefs":["NCIT:C96839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver hemangioma","termid":"MONDO:0002404"},{"relation_name":"is_a","term_name":"cavernous hemangioma","termid":"MONDO:0003155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005570","MONDO:0002515"],"is_obsolete":false,"name":"liver cavernous hemangioma","secondary_identifiers":["MEDGEN:482990","UMLS:C3282904"],"synonyms":[{"name":"cavernous hemangioma of liver","type":"exact"},{"name":"liver cavernous hemangioma","type":"exact"}],"termid":"MONDO:0006267","xrefs":{"Monarch":{"xref_id":"0006267"}}}


id: PBO:0034039
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_component","termid":"PBO:0034039"}


id: PR:P30261
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc27 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P30261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.02c","synonyms":[{"name":"Spom972h-cdc27","type":"exact"},{"name":"cell division control protein 27 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P30261"}


id: MONDO:0016547
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Beckwith-Wiedemann syndrome","termid":"MONDO:0007534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Beckwith-Wiedemann syndrome due to NSD1 mutation","secondary_identifiers":["MEDGEN:1825953","Orphanet:238613","UMLS:C5680933","GARD:17178"],"termid":"MONDO:0016547","xrefs":{"Monarch":{"xref_id":"0016547"}}}


id: PBO:0077099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 8 homolog B","termid":"PBO:0077099"}


id: GO:0018253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein active site cross-link from the alpha-carboxyl carbon of residue n, an alanine, serine or cysteine, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with an oxidation of residue n+1 to form an active aldehyde.","definition_xrefs":["RESID:AA0187","RESID:AA0188","RESID:AA0184"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 5-imidazolinone glycine (obsolete GO:0018253)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via 5-imidazolinone glycine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via 5-imidazolinone glycine","type":"exact"}],"termid":"GO:0018253"}


id: GO:0032453
data:
  {"annotated_genes":["SJAG_03635","SJAG_03286"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76715,71878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a modified lysine residue at position 4 of the histone H3 protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 demethylase activity","termid":"GO:0141052"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03286":null,"SJAG_03635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0032452","GO:0003674"],"is_obsolete":false,"name":"histone H3K4 demethylase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9822461","Reactome:R-HSA-9822467"],"synonyms":[{"name":"histone H3-K4 demethylase activity","type":"exact"},{"name":"histone H3-methyl-lysine-4 demethylase activity","type":"exact"},{"name":"histone demethylase activity (H3-K4 specific)","type":"exact"},{"name":"histone demethylase activity (H3K4-specific)","type":"exact"}],"termid":"GO:0032453","terms_by_termid":{"GO:0034647":null}}


id: PBO:0091933
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA substrate KM 20 nM, Vmax 1.1-2.5 nM/min","termid":"PBO:0091933"}


id: PBO:0084100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanosine diphosphatase located in the Golgi; involved in the transport of GDP-mannose into the Golgi lumen, converting GDP to GMP after mannose is transferred to substrates; null mutants are defective in sporulation and pre-meiotic S phase entry; orthologous to human ENTPD6, a meiosis-associated non-obstructive azoospermia (NOA) related gene identified in GWAS studies","termid":"PBO:0084100"}


id: MONDO:0006423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm arising from the extraskeletal soft tissues near tendons and joints. It is a well circumscribed tumor characterized by the presence of chondrocytes, a lobulated hyaline cartilage growth pattern, and in some cases calcification.","definition_xrefs":["NCIT:C9482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chondroma","termid":"MONDO:0002360"},{"relation_name":"is_a","term_name":"benign soft tissue neoplasm","termid":"MONDO:0044335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"soft tissue chondroma","secondary_identifiers":["SCTID:404078000","DOID:3814","UMLS:C1275277","MEDGEN:266157","EFO:1000540"],"synonyms":[{"name":"chondroma of soft parts","type":"exact"},{"name":"extraskeletal chondroma","type":"exact"},{"name":"extraskeletal osteochondroma","type":"exact"},{"name":"soft tissue chondroma","type":"exact"}],"termid":"MONDO:0006423","xrefs":{"Monarch":{"xref_id":"0006423"}}}


id: GO:2000584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of platelet-derived growth factor receptor-alpha signaling pathway.","definition_xrefs":["GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of platelet-derived growth factor receptor signaling pathway","termid":"GO:0010642"},{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor receptor-alpha signaling pathway","termid":"GO:2000583"},{"relation_name":"negatively_regulates","term_name":"platelet-derived growth factor receptor-alpha signaling pathway","termid":"GO:0035790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of platelet-derived growth factor receptor-alpha signaling pathway","synonyms":[{"name":"negative regulation of PDGF receptor-alpha signaling pathway","type":"exact"},{"name":"negative regulation of PDGFR-alpha signaling pathway","type":"related"},{"name":"negative regulation of alphaPDGF receptor signaling pathway","type":"exact"},{"name":"negative regulation of platelet-derived growth factor receptor-alpha signalling pathway","type":"exact"}],"termid":"GO:2000584"}


id: PBO:0003216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S12 (predicted)","termid":"PBO:0003216"}


id: FYPO:0000343
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of hydrogen sulfide released into the growth medium by cells is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased concentration of substance in growth medium","termid":"FYPO:0000800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001155"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001155"],"is_obsolete":false,"name":"increased concentration of hydrogen sulfide in growth medium","synonyms":[{"name":"increased concentration of H2S in growth medium","type":"exact"},{"name":"increased hydrogen sulfide biosynthesis","type":"related"}],"termid":"FYPO:0000343"}


id: GO:1903124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of thioredoxin peroxidase activity.","definition_xrefs":["GOC:PARL","PMID:21850687","GOC:TermGenie","GO_REF:0000059","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of thioredoxin peroxidase activity (obsolete GO:1903124)","synonyms":[{"name":"down regulation of TPx activity","type":"exact"},{"name":"down regulation of TrxPx activity","type":"exact"},{"name":"down regulation of thiol peroxidase activity","type":"exact"},{"name":"down regulation of thioredoxin peroxidase activity","type":"exact"},{"name":"down-regulation of TPx activity","type":"exact"},{"name":"down-regulation of TrxPx activity","type":"exact"},{"name":"down-regulation of thiol peroxidase activity","type":"exact"},{"name":"down-regulation of thioredoxin peroxidase activity","type":"exact"},{"name":"downregulation of TPx activity","type":"exact"},{"name":"downregulation of TrxPx activity","type":"exact"},{"name":"downregulation of thiol peroxidase activity","type":"exact"},{"name":"downregulation of thioredoxin peroxidase activity","type":"exact"},{"name":"inhibition of TPx activity","type":"narrow"},{"name":"inhibition of TrxPx activity","type":"narrow"},{"name":"inhibition of thiol peroxidase activity","type":"narrow"},{"name":"inhibition of thioredoxin peroxidase activity","type":"narrow"},{"name":"negative regulation of TPx activity","type":"exact"},{"name":"negative regulation of TrxPx activity","type":"exact"},{"name":"negative regulation of thiol peroxidase activity","type":"exact"}],"termid":"GO:1903124"}


id: MONDO:1030001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, juvenile absence, susceptibility to","secondary_identifiers":["OMIMPS:607631"],"termid":"MONDO:1030001","xrefs":{"Monarch":{"xref_id":"1030001"}}}


id: PBO:0110061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nifs homolog, possible cysteine desulfurase, implicated in iron-sulfur cluster assembly","termid":"PBO:0110061"}


id: GO:0018081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of (2R,6R)-lanthionine, sn-(2S,6R)-lanthionine or (2S,3S,6R)-3-methyl-lanthionine, forming an intra-polypeptide cross-link between peptidyl-cysteine, and peptidyl-serine or peptidyl-threonine; dehydration of the serine or threonine residue to the alpha,beta-unsaturated amino acid is the first step; a bond then forms between the ethylene (ethene) group thus formed and the sulfur atom of a cysteine, with the inversion of the configuration of the alpha carbon of the serine or threonine occurring during the process.","definition_xrefs":["RESID:AA0112","RESID:AA0111","ISBN:0198547684","RESID:AA0110"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via lanthionine or 3-methyl-lanthionine (obsolete GO:0018081)","synonyms":[{"name":"peptide cross-linking via the thioethers lanthionine or 3-methyl-lanthionine","type":"exact"},{"name":"peptide cross-linking via the thiolethers lanthionine or 3-methyl-lanthionine","type":"exact"}],"termid":"GO:0018081"}


id: GO:0008283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population.","definition_xrefs":["GOC:mah","GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell population proliferation","synonyms":[{"name":"cell proliferation","type":"related"}],"termid":"GO:0008283"}


id: MONDO:0800291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crossed polydactyly, type I","secondary_identifiers":["GARD:1616","MEDGEN:357421","UMLS:C1868112"],"synonyms":[{"name":"CP1","type":"exact"}],"termid":"MONDO:0800291","xrefs":{"Monarch":{"xref_id":"0800291"}}}


id: MONDO:0002839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete leather-bottle stomach (obsolete MONDO:0002839)","termid":"MONDO:0002839","xrefs":{"Monarch":{"xref_id":"0002839"}}}


id: GO:0047594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6S)-6-hydroxyhyoscyamine + 2-oxoglutarate + O2 = CO2 + H2O + H+ + scopolamine + succinate.","definition_xrefs":["EC:1.14.20.13","RHEA:12797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"6-beta-hydroxyhyoscyamine epoxidase activity","secondary_identifiers":["MetaCyc:6-BETA-HYDROXYHYOSCYAMINE-EPOXIDASE-RXN","KEGG_REACTION:R03737"],"synonyms":[{"name":"(6S)-6-hydroxyhyoscyamine,2-oxoglutarate oxidoreductase (epoxide-forming)","type":"related"},{"name":"6beta-hydroxyhyoscyamine epoxidase activity","type":"related"},{"name":"hydroxyhyoscyamine dioxygenase activity","type":"related"}],"termid":"GO:0047594"}


id: PBO:0053110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LCMT1 antisense RNA 1","termid":"PBO:0053110"}


id: PBO:0072284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 2","termid":"PBO:0072284"}


id: PATO:0002372
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viviparous organism that has given birth five or more times.","definition_xrefs":["wiki:http://en.wikipedia.org/wiki/Parity_(biology)"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiparous","termid":"PATO:0002369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grand multi[arous","termid":"PATO:0002372"}


id: MONDO:0002623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteosarcoma occurring in childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"},{"relation_name":"is_a","term_name":"osteosarcoma","termid":"MONDO:0009807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric osteosarcoma","secondary_identifiers":["MEDGEN:272464","NANDO:2200048","NCIT:C6585","DOID:3361","UMLS:C1332986"],"synonyms":[{"name":"childhood osteogenic sarcoma","type":"exact"},{"name":"childhood osteosarcoma","type":"exact"},{"name":"childhood osteosarcoma (disease)","type":"exact"},{"name":"osteosarcoma","type":"broad"},{"name":"osteosarcoma (disease) of childhood","type":"exact"},{"name":"paediatric osteosarcoma (disease)","type":"exact"},{"name":"pediatric osteosarcoma","type":"exact"},{"name":"pediatric osteosarcoma (disease)","type":"exact"}],"termid":"MONDO:0002623","xrefs":{"Monarch":{"xref_id":"0002623"}}}


id: PR:O43070
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nbs1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair and telomere maintenance protein nbs1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.09c","synonyms":[{"name":"Spom972h-nbs1","type":"exact"}],"termid":"PR:O43070"}


id: FYPO:0002051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is swollen, elongated, has no septum, and contains more than one nucleus. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen elongated cell","termid":"FYPO:0001429"},{"relation_name":"is_a","term_name":"elongated multinucleate aseptate vegetative cell","termid":"FYPO:0002049"},{"relation_name":"is_a","term_name":"swollen multinucleate vegetative cell","termid":"FYPO:0004257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000005","FYPO:0001320","FYPO:0000032","FYPO:0005447"],"is_obsolete":false,"name":"swollen elongated multinucleate aseptate vegetative cell","synonyms":[{"name":"elongated multinucleate aseptate vegetative cell with increased cell volume","type":"exact"},{"name":"enlarged elongated multinucleate aseptate vegetative cell","type":"related"},{"name":"large elongated multinucleate aseptate vegetative cell","type":"related"},{"name":"swollen elongated multinucleate aseptate cell during vegetative growth","type":"exact"},{"name":"swollen elongated multinucleate aseptate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002051"}


id: MONDO:0022736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"},{"relation_name":"is_a","term_name":"occupational disorder","termid":"MONDO:0100366"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occupational lung disease","secondary_identifiers":["SCTID:86157004","MEDGEN:538557","UMLS:C0264421","ICD9:508.9"],"synonyms":[{"name":"Occupational inhalation disease","type":"related"},{"name":"Occupational lung disease","type":"related"},{"name":"Occupational lung disorder","type":"related"},{"name":"Occupational pulmonary disease","type":"related"},{"name":"Occupational respiratory disease","type":"related"}],"termid":"MONDO:0022736","xrefs":{"Monarch":{"xref_id":"0022736"}}}


id: PBO:0034463
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_cellular_response_to_bleomycin","termid":"PBO:0034463"}


id: PBO:0038914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor F4","termid":"PBO:0038914"}


id: PBO:0014280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex subunit Mdm12","termid":"PBO:0014280"}


id: GO:2001146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity (obsolete GO:2001146)","termid":"GO:2001146"}


id: GO:0007225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The posttranslational modification of members of the Hedgehog family of signaling proteins in order for Hedgehog to exert its biological activity. These modifications include cleavage of its signal sequence, autocatalytic protein cleavage and the attachment of sterol groups.","definition_xrefs":["PMID:15057936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone processing","termid":"GO:0016486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"patched ligand maturation","synonyms":[{"name":"Hedgehog protein processing","type":"narrow"},{"name":"hh protein processing","type":"exact"},{"name":"patched ligand processing","type":"related"}],"termid":"GO:0007225"}


id: MONDO:1010586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial goiter that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial goiter, non-human animal","termid":"MONDO:1010053"},{"relation_name":"is_a","term_name":"congenital hypothyroidism, domestic cat","termid":"MONDO:1010603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial goiter, domestic cat","secondary_identifiers":["OMIA:000424-9685"],"termid":"MONDO:1010586","xrefs":{"Monarch":{"xref_id":"1010586"}}}


id: PBO:0004889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of MBF","termid":"PBO:0004889"}


id: PBO:0070995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 19","termid":"PBO:0070995"}


id: PBO:0034620
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_Cutin-1","termid":"PBO:0034620"}


id: PBO:0090163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin-beta family nuclear import receptor Mtr10","termid":"PBO:0090163"}


id: GO:0030191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of chaperones of the Hsp70/Hsc70 class.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete Hsp70/Hsc70 protein inhibitor activity (obsolete GO:0030191)","synonyms":[{"name":"Hsp70/Hsc70 protein inhibitor activity","type":"exact"}],"termid":"GO:0030191"}


id: PBO:0089142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain Sre1 cleavage protein","termid":"PBO:0089142"}


id: PBO:0055879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 4B","termid":"PBO:0055879"}


id: PBO:0001102
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multi copy Suppressor of Chk1","termid":"PBO:0001102"}


id: PBO:0060994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nescient helix-loop-helix 1","termid":"PBO:0060994"}


id: PBO:0062765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily S member 1 pseudogene","termid":"PBO:0062765"}


id: GO:0071611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of granulocyte colony-stimulating factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"granulocyte colony-stimulating factor production","synonyms":[{"name":"CSF3 production","type":"exact"},{"name":"G-CSF production","type":"exact"},{"name":"colony stimulating factor 3 (granulocyte) production","type":"exact"},{"name":"filgrastim production","type":"exact"},{"name":"granulocyte colony stimulating factor production","type":"exact"},{"name":"lenograstim production","type":"exact"},{"name":"pluripoietin production","type":"exact"}],"termid":"GO:0071611"}


id: PBO:0087748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the THO complex; THO is a nuclear complex comprised of Hpr1p, Mft1p, Rlr1p, and Thp2p, that is involved in transcription elongation and mitotic recombination; involved in telomere maintenance","termid":"PBO:0087748"}


id: GO:0052091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism modulates the frequency, rate or extent of the release of nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquisition of nutrients from host","termid":"GO:0044002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of nutrient release by host","synonyms":[{"name":"modulation by symbiont of nutrient release from host","type":"exact"}],"termid":"GO:0052091"}


id: MONDO:0022404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete retinal ciliopathy due to mutation in Usher gene (obsolete MONDO:0022404)","secondary_identifiers":["Orphanet:156177"],"termid":"MONDO:0022404","xrefs":{"Monarch":{"xref_id":"0022404"}}}


id: PBO:0043319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLIP1 antisense RNA 1","termid":"PBO:0043319"}


id: GO:0034409
data:
  {"annotated_genes":["SJAG_03587","SJAG_04771","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[89369,94302],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds, found in the walls of ascospores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ascospore wall beta-glucan metabolic process","termid":"GO:0034408"},{"relation_name":"is_a","term_name":"fungal-type cell wall (1->3)-beta-D-glucan metabolic process","termid":"GO:0071969"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03587":null,"SJAG_04666":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0005975","GO:0071554","GO:0044085","GO:0030437","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"ascospore wall (1->3)-beta-D-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ascospore wall 1,3-beta-D-glucan metabolic process","type":"exact"},{"name":"ascospore wall 1,3-beta-glucan metabolic process","type":"broad"},{"name":"ascospore wall 1,3-beta-glucan metabolism","type":"exact"},{"name":"ascospore wall beta-1,3 glucan metabolic process","type":"exact"},{"name":"ascospore wall beta-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0034409","terms_by_termid":{"GO:0034413":null,"GO:0140748":null}}


id: GO:0098027
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The external contractile envelope of the tail of some viruses. Its contraction ensures ejection of the virus DNA into the host cytoplasm.","definition_xrefs":["VZ:3959","GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"virus tail","termid":"GO:0098015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virus tail, sheath","synonyms":[{"name":"bacteriophage tail sheath","type":"narrow"}],"termid":"GO:0098027"}


id: MONDO:0007783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any malignant hyperthermia of anesthesia in which the cause of the disease is a mutation in the RYR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"malignant hyperthermia of anesthesia","termid":"MONDO:0018493"},{"relation_name":"is_a","term_name":"malignant hyperthermia, susceptibility to","termid":"MONDO:0800188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hyperthermia, susceptibility to, 1","secondary_identifiers":["MEDGEN:443948","MESH:C535694","UMLS:C2930980","DOID:0080990","OMIM:145600"],"synonyms":[{"name":"King syndrome","type":"related"},{"name":"King-Denborough syndrome","type":"related"},{"name":"King-Denborough syndrome, included","type":"related"},{"name":"MHS","type":"related"},{"name":"MHS1","type":"related"},{"name":"RYR1 malignant hyperthermia of anaesthesia","type":"exact"},{"name":"RYR1 malignant hyperthermia of anesthesia","type":"exact"},{"name":"hyperpyrexia, malignant","type":"related"},{"name":"hyperpyrexia, malignant;MH KING syndrome, included","type":"related"},{"name":"hyperthermia of anaesthesia","type":"related"},{"name":"hyperthermia of anesthesia","type":"related"},{"name":"malignant hyperthermia of anaesthesia caused by mutation in RYR1","type":"exact"},{"name":"malignant hyperthermia of anesthesia caused by mutation in RYR1","type":"exact"},{"name":"malignant hyperthermia susceptibility 1","type":"exact"},{"name":"malignant hyperthermia susceptibility type 1","type":"related"},{"name":"malignant hyperthermia, susceptibility to, 1","type":"exact"},{"name":"malignant hyperthermia, susceptibility to, type 1","type":"exact"},{"name":"susceptibility to malignant hyperthermia 1","type":"related"}],"termid":"MONDO:0007783","xrefs":{"Monarch":{"xref_id":"0007783"}}}


id: PBO:0058895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12113","termid":"PBO:0058895"}


id: PBO:0052316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1143","termid":"PBO:0052316"}


id: PBO:0003579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mdm10/Mdm12/Mmm1 complex subunit Mmm1 (predicted)","termid":"PBO:0003579"}


id: GO:0021786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branchiomotor neuron growth cone in the neural tube is directed to a specific target site in the neural tube. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx.","definition_xrefs":["GO_REF:0000021","PMID:14699587","GOC:dph","GOC:jid","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiomotor neuron axon guidance","termid":"GO:0021785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branchiomotor neuron axon guidance in neural tube","termid":"GO:0021786"}


id: PBO:0034451
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transcription_from_CRE_promoter_during_cellular_response_to_miconazole","termid":"PBO:0034451"}


id: PBO:0035906
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_glucose_starvation","termid":"PBO:0035906"}


id: MONDO:0000273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A West Nile encephalitis that results in infection located in brain, has material basis in Kunjin virus, a subtype of West Nile Virus, which is transmitted by Culex annulirostris mosquito bite. The infection has symptom fever, has symptom rigor, has symptom headache, has symptom confusion, and has symptom lethargy.","definition_xrefs":["DOID:0050174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"West-Nile encephalitis","termid":"MONDO:0019376"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kunjin virus infectous disease","synonyms":[{"name":"Kunjin encephalitis","type":"exact"}],"termid":"MONDO:0000273","xrefs":{"Monarch":{"xref_id":"0000273"}}}


id: GO:0120122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving prolactin, a protein hormone of the anterior pituitary gland that promotes lactation in response to the suckling stimulus of hungry young mammals.","definition_xrefs":["PMID:11015620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prolactin metabolic process","synonyms":[{"name":"prolactin metabolism","type":"exact"}],"termid":"GO:0120122"}


id: PBO:0045315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA nucleotidylexotransferase","termid":"PBO:0045315"}


id: PBO:0063602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 14","termid":"PBO:0063602"}


id: GO:1900643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of chanoclavine-I biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of chanoclavine-I biosynthetic process (obsolete GO:1900643)","synonyms":[{"name":"regulation of chanoclavine-I anabolism","type":"exact"},{"name":"regulation of chanoclavine-I biosynthesis","type":"exact"},{"name":"regulation of chanoclavine-I formation","type":"exact"},{"name":"regulation of chanoclavine-I synthesis","type":"exact"}],"termid":"GO:1900643"}


id: FYPO:0006709
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during cellular response to osmotic stress","termid":"FYPO:0002289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to salt stress","synonyms":[{"name":"abolished protein phosphorylation during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0006709"}


id: PBO:0084714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane localized ATP-dependent DNA helicase; required for the maintenance of the mitochondrial genome; not required for mitochondrial transcription; has homology to E. coli helicase uvrD","termid":"PBO:0084714"}


id: PBO:0052540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 13","termid":"PBO:0052540"}


id: MONDO:0018215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A paraneoplastic syndrome that involves the nervous system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"paraneoplastic syndrome","termid":"MONDO:0021073"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraneoplastic neurologic syndrome","secondary_identifiers":["MedDRA:10072106","MEDGEN:155656","GARD:7326","ICD9:331.89","SCTID:192877007","UMLS:C0751911","Orphanet:36388"],"synonyms":[{"name":"PCD","type":"exact"},{"name":"PNS","type":"exact"},{"name":"nervous system paraneoplastic syndrome","type":"exact"},{"name":"paraneoplastic cerebellar degeneration","type":"narrow"},{"name":"paraneoplastic syndrome of nervous system","type":"exact"}],"termid":"MONDO:0018215","xrefs":{"Monarch":{"xref_id":"0018215"}}}


id: MONDO:0018797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic cardiac malformation (obsolete MONDO:0018797)","secondary_identifiers":["Orphanet:477805"],"termid":"MONDO:0018797","xrefs":{"Monarch":{"xref_id":"0018797"}}}


id: SO:0000873
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that is edited.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"guided_by","term_name":"guide_RNA","termid":"SO:0000602"},{"relation_name":"has_part","term_name":"anchor_binding_site","termid":"SO:0000977"},{"relation_name":"has_quality","term_name":"edited","termid":"SO:0000116"},{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edited_transcript","synonyms":[{"name":"edited transcript","type":"exact"}],"termid":"SO:0000873"}


id: MONDO:0000491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A ischemia that involves the limb.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ischemic disease","termid":"MONDO:0005053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"limb ischemia","secondary_identifiers":["SCTID:21631000119105","MEDGEN:754513","UMLS:C2945695","DOID:0050852"],"synonyms":[{"name":"ischaemic disease of limb","type":"exact"},{"name":"ischemic disease of limb","type":"exact"},{"name":"limb ischaemic disease","type":"exact"},{"name":"limb ischemia","type":"exact"},{"name":"limb ischemic disease","type":"exact"}],"termid":"MONDO:0000491","xrefs":{"Monarch":{"xref_id":"0000491"}}}


id: PBO:0058091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4307 host gene","termid":"PBO:0058091"}


id: GO:0072259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a metanephric interstitial fibroblast over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal interstitial fibroblast development","termid":"GO:0072141"},{"relation_name":"part_of","term_name":"metanephric interstitial fibroblast differentiation","termid":"GO:0072258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric interstitial fibroblast development","synonyms":[{"name":"metanephros interstitial cell development","type":"exact"}],"termid":"GO:0072259"}


id: GO:0045931
data:
  {"annotated_genes":["SJAG_00256","SJAG_01456","SJAG_00082","SJAG_01311","SJAG_04968","SJAG_03371","SJAG_01401","SJAG_01825","SJAG_01679","SJAG_02451","SJAG_02380","SJAG_01837","SJAG_03126","SJAG_02169","SJAG_01901","SJAG_03353","SJAG_01801","SJAG_02810","SJAG_04573","SJAG_04332","SJAG_03699","SJAG_02342","SJAG_03486","SJAG_02498","SJAG_01000","SJAG_04486","SJAG_03309","SJAG_00666","SJAG_01805","SJAG_00117","SJAG_02332","SJAG_02336","SJAG_02404","SJAG_03602","SJAG_02723","SJAG_03067","SJAG_02592","SJAG_03048","SJAG_00216","SJAG_02074","SJAG_03591","SJAG_01210","SJAG_00214","SJAG_01297","SJAG_04813","SJAG_04259","SJAG_03695","SJAG_03681","SJAG_00883","SJAG_00457","SJAG_04597","SJAG_03160","SJAG_03592","SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117903,109188,105826,113946,101506,110218,115777,116269,92595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[106380,107925,111241,107760,104296,108605,120396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110045"},{"annotations":[96084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[114024,105257,119289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[95635,91868,104306,113948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031536"},{"annotations":[111159,104307,119082,108612,107764,107926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900087"},{"annotations":[103689,96297,89905,75237,93618,110540,118491,109190,118680,72491,89914,100915,95686,94019,96258,113186,105422,100342,112320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010971"},{"annotations":[89708,103320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905287"},{"annotations":[104312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903465"},{"annotations":[99611,104038,113361,102064,116768,95689,104314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"},{"annotations":[113422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[93630,110867,76741,78497,117340,117907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007089"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of progression through the mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle","termid":"GO:0007346"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle","termid":"GO:0045787"},{"relation_name":"positively_regulates","term_name":"mitotic cell cycle","termid":"GO:0000278"}],"gene_count":54,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00117":null,"SJAG_00214":null,"SJAG_00216":null,"SJAG_00256":null,"SJAG_00457":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01000":null,"SJAG_01210":null,"SJAG_01297":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01456":null,"SJAG_01679":null,"SJAG_01801":null,"SJAG_01805":null,"SJAG_01825":null,"SJAG_01837":null,"SJAG_01901":null,"SJAG_02074":null,"SJAG_02169":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02342":null,"SJAG_02380":null,"SJAG_02404":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02810":null,"SJAG_03048":null,"SJAG_03067":null,"SJAG_03126":null,"SJAG_03160":null,"SJAG_03309":null,"SJAG_03353":null,"SJAG_03371":null,"SJAG_03486":null,"SJAG_03591":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_03681":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04332":null,"SJAG_04486":null,"SJAG_04573":null,"SJAG_04597":null,"SJAG_04813":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of progression through mitotic cell cycle","type":"narrow"},{"name":"positive regulation of mitotic cell cycle progression","type":"exact"},{"name":"positive regulation of progression through mitotic cell cycle","type":"exact"},{"name":"stimulation of progression through mitotic cell cycle","type":"narrow"},{"name":"up regulation of progression through mitotic cell cycle","type":"exact"},{"name":"up-regulation of progression through mitotic cell cycle","type":"exact"},{"name":"upregulation of progression through mitotic cell cycle","type":"exact"}],"termid":"GO:0045931","terms_by_termid":{"GO:0007089":null,"GO:0010971":null,"GO:0031536":null,"GO:0045842":null,"GO:0110045":null,"GO:0110161":null,"GO:0140499":null,"GO:1900087":null,"GO:1902426":null,"GO:1903465":null,"GO:1903468":null,"GO:1905287":null}}


id: GO:0097076
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses protein kinase activity and activates the I-kappa B kinase complex (IKK) and mitogen-activated protein (MAP) kinases in response to TRAF6 signaling. It comprises the catalytic subunit TAK1 complexed to the regulatory subunits, termed TABs (TAK1-binding subunits).","definition_xrefs":["PMID:18021073","GOC:cna","PMID:17496917","PMID:16410796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase complex","termid":"GO:1902911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"transforming growth factor beta activated kinase 1 complex","synonyms":[{"name":"TAK1 kinase complex","type":"exact"}],"termid":"GO:0097076"}


id: PBO:0056747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit","termid":"PBO:0056747"}


id: GO:0004977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with melanocortin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"melanocortin receptor activity","termid":"GO:0004977"}


id: GO:0030442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPK during sporulation (sensu Fungi) (obsolete GO:0030442)","synonyms":[{"name":"inactivation of MAPK during sporulation (sensu Fungi)","type":"exact"}],"termid":"GO:0030442"}


id: PBO:0004030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane translocase complex Tom5 (predicted)","termid":"PBO:0004030"}


id: PBO:0053670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 851","termid":"PBO:0053670"}


id: GO:0047827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-lysopine + H2O + NADP+ = L-lysine + H+ + NADPH + pyruvate.","definition_xrefs":["RHEA:17625","EC:1.5.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-lysopine dehydrogenase activity","secondary_identifiers":["MetaCyc:D-LYSOPINE-DEHYDROGENASE-RXN","KEGG_REACTION:R00452"],"synonyms":[{"name":"2-N-(D-1-carboxyethyl)-L-lysine:NADP+ oxidoreductase (L-lysine-forming)","type":"related"},{"name":"D(+)-lysopine dehydrogenase activity","type":"related"},{"name":"D-lysopine synthase activity","type":"related"},{"name":"N2-(D-1-carboxyethyl)-L-lysine:NADP+ oxidoreductase (L-lysine-forming)","type":"related"},{"name":"lysopine dehydrogenase activity","type":"related"}],"termid":"GO:0047827"}


id: GO:0045801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chitin-based cuticular tanning.","definition_xrefs":["GOC:mtg_sensu","GOC:go_curators","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chitin-based cuticle tanning","termid":"GO:0007564"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"chitin-based cuticle sclerotization","termid":"GO:0007593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chitin-based cuticle tanning","synonyms":[{"name":"activation of cuticle tanning","type":"narrow"},{"name":"positive regulation of cuticle hardening","type":"narrow"},{"name":"positive regulation of cuticle tanning","type":"exact"},{"name":"stimulation of cuticle tanning","type":"narrow"},{"name":"up regulation of cuticle tanning","type":"exact"},{"name":"up-regulation of cuticle tanning","type":"exact"},{"name":"upregulation of cuticle tanning","type":"exact"}],"termid":"GO:0045801"}


id: GO:0051874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sphinganine-1-phosphate, the phosphorylated derivative of D-erythro-2-amino-1,3-octadecanediol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphinganine-1-phosphate metabolic process","termid":"GO:0006668"},{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"sphingolipid catabolic process","termid":"GO:0030149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sphinganine-1-phosphate catabolic process","synonyms":[{"name":"dihydrosphingosine-1-phosphate catabolic process","type":"exact"},{"name":"dihydrosphingosine-1-phosphate catabolism","type":"exact"}],"termid":"GO:0051874"}


id: PBO:0087587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the APT subcomplex of cleavage and polyadenylation factor; may have a role in 3' end formation of both polyadenylated and non-polyadenylated RNAs; SYC1 has a paralog, YSH1, that arose from the whole genome duplication","termid":"PBO:0087587"}


id: PBO:0063998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 32","termid":"PBO:0063998"}


id: PBO:0017488
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-positively_regulates","termid":"PBO:0017488"}


id: MONDO:0001535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the vagus nerve.","direct_ancestors":[{"relation_name":"is_a","term_name":"glossopharyngeal nerve disorder","termid":"MONDO:0002639"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vagus nerve disorder","secondary_identifiers":["UMLS:C0152179","MEDGEN:101824","DOID:12491","ICD9:352.3","MESH:D020421","SCTID:73765005","NCIT:C27591"],"synonyms":[{"name":"Vagus nerve disorder","type":"exact"},{"name":"disease of vagus nerve","type":"exact"},{"name":"disease or disorder of vagus nerve","type":"exact"},{"name":"disorder of pneumogastric [10th] nerve","type":"exact"},{"name":"disorder of vagal nerve","type":"exact"},{"name":"disorder of vagus nerve","type":"exact"},{"name":"vagus nerve disease","type":"exact"},{"name":"vagus nerve disease or disorder","type":"exact"}],"termid":"MONDO:0001535","xrefs":{"Monarch":{"xref_id":"0001535"}}}


id: PBO:0042163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 24","termid":"PBO:0042163"}


id: MONDO:0006115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An advanced phase of chronic myelogenous leukemia. It is characterized by: 1. the presence of blasts in the peripheral blood or bone marrow that are at least 20% of the peripheral blood white cells or of the nucleated cells in the bone marrow respectively, or 2. an extramedullary proliferation of blasts, and/or 3. when there are large aggregates and clusters of blasts in the bone marrow biopsy specimen (adapted from WHO, 2001).","definition_xrefs":["NCIT:C9110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic myelogenous leukemia, BCR-ABL1 positive","termid":"MONDO:0011996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"blast phase chronic myelogenous leukemia, BCR-ABL1 positive","secondary_identifiers":["MEDGEN:2281","MESH:D001752","EFO:1000131","SCTID:413656006","UMLS:C0005699"],"synonyms":[{"name":"blast crises","type":"related"},{"name":"blast crisis","type":"exact"},{"name":"blast phase","type":"related"},{"name":"blast phase CML","type":"exact"},{"name":"blast phase chronic granulocytic leukaemia","type":"exact"},{"name":"blast phase chronic granulocytic leukemia","type":"exact"},{"name":"blast phase chronic myelocytic leukaemia","type":"exact"},{"name":"blast phase chronic myelocytic leukemia","type":"exact"},{"name":"blast phase chronic myelogenous leukaemia","type":"exact"},{"name":"blast phase chronic myelogenous leukemia","type":"exact"},{"name":"blast phase chronic myeloid leukaemia","type":"exact"},{"name":"blast phase chronic myeloid leukemia","type":"exact"},{"name":"blast phases","type":"related"},{"name":"blastic phase CML","type":"exact"},{"name":"blastic phase chronic granulocytic leukaemia","type":"exact"},{"name":"blastic phase chronic granulocytic leukemia","type":"exact"},{"name":"blastic phase chronic myelocytic leukaemia","type":"exact"},{"name":"blastic phase chronic myelocytic leukemia","type":"exact"},{"name":"blastic phase chronic myelogenous leukaemia","type":"exact"},{"name":"blastic phase chronic myelogenous leukemia","type":"exact"},{"name":"blastic phase chronic myeloid leukaemia","type":"exact"},{"name":"blastic phase chronic myeloid leukemia","type":"exact"},{"name":"crises, blast","type":"related"},{"name":"crisis, blast","type":"related"},{"name":"phase, blast","type":"related"},{"name":"phases, blast","type":"related"}],"termid":"MONDO:0006115","xrefs":{"Monarch":{"xref_id":"0006115"}}}


id: PBO:0068445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 19, pseudogene","termid":"PBO:0068445"}


id: PBO:0043017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHL1 antisense RNA 1","termid":"PBO:0043017"}


id: FYPO:0003038
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which RNA stability is abnormal. RNA molecules may be more or less likely to degrade over a given time period than in wild type. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal RNA stability","synonyms":[{"name":"altered RNA stability","type":"exact"}],"termid":"FYPO:0003038"}


id: GO:0042160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the covalent alteration of one or more amino acid or lipid residues occurring in a lipoprotein, any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein metabolic process","termid":"GO:0042157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipoprotein modification","termid":"GO:0042160"}


id: MONDO:0000639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer involving a cartilage tissue.","definition_xrefs":["MONDO:patterns/cancer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone cancer","termid":"MONDO:0002129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cartilage cancer","secondary_identifiers":["MEDGEN:1843449","GARD:6004","UMLS:C4290064","DOID:0060102"],"synonyms":[{"name":"cancer of cartilage tissue","type":"exact"},{"name":"cartilage tissue cancer","type":"exact"},{"name":"cartilaginous cancer","type":"exact"},{"name":"malignant cartilage tissue neoplasm","type":"exact"},{"name":"malignant neoplasm of cartilage tissue","type":"exact"}],"termid":"MONDO:0000639","xrefs":{"Monarch":{"xref_id":"0000639"}}}


id: PBO:0034730
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heteromeric(12)","termid":"PBO:0034730"}


id: PBO:0057043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 133a-2","termid":"PBO:0057043"}


id: PBO:0056759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 14, N6-adenosine-methyltransferase subunit","termid":"PBO:0056759"}


id: MONDO:0002584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syringomyelia (obsolete MONDO:0002584)","termid":"MONDO:0002584","xrefs":{"Monarch":{"xref_id":"0002584"}}}


id: FYPO:0000055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form microtubules that are longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0001320","FYPO:0000002","FYPO:0000054","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"long microtubules","synonyms":[{"name":"elongated microtubules","type":"exact"},{"name":"long microtubules during mitotic cell cycle","type":"related"},{"name":"long microtubules during vegetative growth","type":"exact"},{"name":"microtubule organization defects, long microtubules","type":"exact"}],"termid":"FYPO:0000055"}


id: PBO:0085201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer kinetochore protein required for accurate chromosome segregation; component of COMA (Ctf19p, Okp1p, Mcm21p, Ame1p) a kinetochore sub-complex which functions as a platform for kinetochore assembly; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-Q and fission yeast fta7","termid":"PBO:0085201"}


id: MONDO:0022739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Christian Demyer Franken syndrome","termid":"MONDO:0022739","xrefs":{"Monarch":{"xref_id":"0022739"}}}


id: PBO:0062698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily C member 4 pseudogene","termid":"PBO:0062698"}


id: SO:0001752
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL7 RNA leader sequence to the 5' end of an mRNA. SL7 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL7_acceptor_site","synonyms":[{"name":"SL37 acceptor site","type":"exact"}],"termid":"SO:0001752"}


id: PBO:0063339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferating cell nuclear antigen pseudogene 4","termid":"PBO:0063339"}


id: PR:Q10438
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pby1 gene.","definition_xrefs":["UniProtKB:Q10438","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin--tyrosine ligase C12B10.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.04","synonyms":[{"name":"Spom972h-pby1","type":"exact"}],"termid":"PR:Q10438"}


id: GO:0140948
data:
  {"annotated_genes":["SJAG_04574"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112472],"is_not":false,"summary":null,"term":"GO:0140948"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl9-[histone H3] + S-adenosyl-L-methionine = H+ + N6-methyl-L-lysyl9-[histone H3] + S-adenosyl-L-homocysteine. This reaction is the addition of a methyl group to the unmethylated lysine residue at position 9 of histone H3, producing histone H3K9me.","definition_xrefs":["RHEA:60288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K9 methyltransferase activity","termid":"GO:0046974"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740","GO:0008276","GO:0140096"],"is_obsolete":false,"name":"histone H3K9 monomethyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.367"],"synonyms":[{"name":"histone H3-K9 methylation","type":"broad"},{"name":"histone H3K9 methylation","type":"broad"},{"name":"histone H3K9 monomethylase activity","type":"exact"},{"name":"histone lysine N-monomethyltransferase activity (H3-K9 specific)","type":"exact"}],"termid":"GO:0140948","terms_by_termid":{"GO:0140948":null}}


id: GO:0004560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an alpha-L-fucoside + H2O = an alcohol + L-fucose.","definition_xrefs":["EC:3.2.1.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosidase activity","termid":"GO:0015928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"alpha-L-fucosidase activity","secondary_identifiers":["RHEA:12288","MetaCyc:ALPHA-L-FUCOSIDASE-RXN","Reactome:R-HSA-5693807"],"synonyms":[{"name":"alpha-L-fucoside fucohydrolase activity","type":"related"},{"name":"alpha-fucosidase activity","type":"related"}],"termid":"GO:0004560"}


id: PBO:0051462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 10-54","termid":"PBO:0051462"}


id: PBO:0003434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein (predicted), DUF1773 family protein 6","termid":"PBO:0003434"}


id: PBO:0062197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily T member 1 pseudogene","termid":"PBO:0062197"}


id: PBO:0110824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type Toe2","termid":"PBO:0110824"}


id: PATO:0002363
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A medium brown color with a metallic sheen, resembles the actual alloy bronze.","definition_xrefs":["PATO:LC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brown","termid":"PATO:0000952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronze","termid":"PATO:0002363"}


id: GO:0043807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methyl-2-oxobutanoate + CoA + oxidized ferredoxin = S-(2-methylpropanoyl)-CoA + CO2 + reduced ferredoxin.","definition_xrefs":["EC:1.2.7.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","termid":"GO:0016625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) activity","secondary_identifiers":["MetaCyc:1.2.7.7-RXN","RHEA:11712"],"synonyms":[{"name":"2-ketoisovalerate ferredoxin reductase activity","type":"related"},{"name":"2-oxoisovalerate ferredoxin reductase activity","type":"related"},{"name":"3-methyl-2-oxobutanoate synthase (ferredoxin) activity","type":"related"},{"name":"3-methyl-2-oxobutanoate:ferredoxin oxidoreductase (decarboxylating; CoA-2-methylpropanoylating)","type":"exact"},{"name":"VOR","type":"related"},{"name":"branched-chain ketoacid ferredoxin reductase activity","type":"related"},{"name":"branched-chain oxo acid ferredoxin reductase activity","type":"related"},{"name":"keto-valine-ferredoxin oxidoreductase activity","type":"related"},{"name":"ketoisovalerate ferredoxin reductase activity","type":"related"},{"name":"ketoisovalerate oxidoreductase activity","type":"related"}],"termid":"GO:0043807"}


id: PBO:0081086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 16","termid":"PBO:0081086"}


id: GO:0031121
data:
  {"annotated_genes":["SJAG_03052"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031025"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins at the midpoint of a cell.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03052":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"equatorial microtubule organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"equatorial microtubule organisation","type":"exact"},{"name":"equatorial microtubule organization and biogenesis","type":"related"}],"termid":"GO:0031121","terms_by_termid":{"GO:0031025":null}}


id: PBO:0057496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 614","termid":"PBO:0057496"}


id: MONDO:0100108
data:
  {"annotated_genes":["SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800341"},{"annotations":[86985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012239"}]},"cv_name":"mondo","definition":"TPM3-related myopathy is a disorder of the musculoskeletal system that covers a wide spectrum of phenotypes and is caused by pathogenic variants in the skeletal muscle γ-Tropomyosin gene. These variants lead to a variety of overlapping adult onset and congenital myopathies characterized by muscle weakness, hypotonia, motor delay, myopathic facies, scoliosis, and sometimes respiratory involvement. Histologic findings on skeletal muscle biopsy are variable with nemaline and intranuclear bodies, cap-like lesions, fiber-type disproportion, and dystrophic features even in patients with the same mutation.","definition_xrefs":["PMID:24692096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of tropomyosin","termid":"MONDO:0017303"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"TPM3-related myopathy","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"TPM3 myopathy","type":"exact"},{"name":"TPM3-related myopathy","type":"exact"},{"name":"autosomal dominant TPM3-related myopathy","type":"narrow"},{"name":"congenital myopathy related to TPM3","type":"exact"}],"termid":"MONDO:0100108","terms_by_termid":{"MONDO:0012239":null,"MONDO:0800341":null},"xrefs":{"Monarch":{"xref_id":"0100108"}}}


id: PBO:0002024
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"co-expressed with adjacent tandem gene","termid":"PBO:0002024"}


id: PBO:0029294
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nucleus","termid":"PBO:0029294"}


id: PBO:0058906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12124","termid":"PBO:0058906"}


id: PBO:0044312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b561 family member A3","termid":"PBO:0044312"}


id: PBO:0067915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 217","termid":"PBO:0067915"}


id: GO:1901837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transcription of nuclear large rRNA transcript mediated by RNA polymerase I.","definition_xrefs":["GOC:TermGenie","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transcription by RNA polymerase I","termid":"GO:0016479"},{"relation_name":"is_a","term_name":"regulation of transcription of nucleolar large rRNA by RNA polymerase I","termid":"GO:1901836"},{"relation_name":"negatively_regulates","term_name":"nucleolar large rRNA transcription by RNA polymerase I","termid":"GO:0042790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"negatively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351","GO:0006355"],"is_obsolete":false,"name":"negative regulation of transcription of nucleolar large rRNA by RNA polymerase I","synonyms":[{"name":"down regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"exact"},{"name":"down regulation of transcription of nuclear rRNA large Pol I transcript","type":"exact"},{"name":"down-regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"exact"},{"name":"down-regulation of transcription of nuclear rRNA large Pol I transcript","type":"exact"},{"name":"downregulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"exact"},{"name":"downregulation of transcription of nuclear rRNA large Pol I transcript","type":"exact"},{"name":"inhibition of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"narrow"},{"name":"inhibition of transcription of nuclear rRNA large Pol I transcript","type":"exact"},{"name":"negative regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"exact"},{"name":"negative regulation of transcription of nuclear rRNA large Pol I transcript","type":"exact"}],"termid":"GO:1901837"}


id: PBO:0083656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endonuclease I-SceIII; encoded by a mobile group I intron within the mitochondrial COX1 gene","termid":"PBO:0083656"}


id: MONDO:0021243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the parotid gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parotid disorder","termid":"MONDO:0005899"},{"relation_name":"is_a","term_name":"neoplasm of major salivary gland","termid":"MONDO:0021368"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parotid gland neoplasm","secondary_identifiers":["MEDGEN:18313","UMLS:C0030581","EFO:0003873","NCIT:C3314","SCTID:126788000"],"synonyms":[{"name":"neoplasm of parotid","type":"exact"},{"name":"neoplasm of parotid gland","type":"exact"},{"name":"neoplasm of the parotid","type":"exact"},{"name":"neoplasm of the parotid gland","type":"exact"},{"name":"parotid gland neoplasm (disease)","type":"exact"},{"name":"parotid gland tumor","type":"exact"},{"name":"parotid gland tumour","type":"exact"},{"name":"parotid neoplasm","type":"exact"},{"name":"parotid tumor","type":"exact"},{"name":"parotid tumour","type":"exact"},{"name":"tumor of parotid","type":"exact"},{"name":"tumor of parotid gland","type":"exact"},{"name":"tumor of the parotid","type":"exact"},{"name":"tumor of the parotid gland","type":"exact"},{"name":"tumour of parotid","type":"exact"},{"name":"tumour of parotid gland","type":"exact"},{"name":"tumour of the parotid","type":"exact"},{"name":"tumour of the parotid gland","type":"exact"}],"termid":"MONDO:0021243","xrefs":{"Monarch":{"xref_id":"0021243"}}}


id: PBO:0056023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSP1 pseudogene 1","termid":"PBO:0056023"}


id: PR:Q9UU82
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- are2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UU82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol O-acyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.05c","synonyms":[{"name":"Spom972h-are2","type":"exact"},{"name":"sterol-ester synthase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UU82"}


id: PBO:0003019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein","termid":"PBO:0003019"}


id: MONDO:0006359
data:
  {"annotated_genes":["SJAG_00289","SJAG_00991","SJAG_05346"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88779,88777,88778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011705"}]},"cv_name":"mondo","definition":"A soft tissue neoplasm composed of perivascular epithelioid cells. Representative examples include angiomyolipoma, clear cell-sugar-tumor of the lung, and lymphangioleiomyomatosis.","definition_xrefs":["NCIT:C38150"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pericytic neoplasm","termid":"MONDO:0002604"},{"relation_name":"is_a","term_name":"soft tissue neoplasm","termid":"MONDO:0006424"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_00991":null,"SJAG_05346":null},"genotype_count":0,"is_obsolete":false,"name":"neoplasm with perivascular epithelioid cell differentiation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:595133","MEDGEN:266246","EFO:1000464","MESH:D054973","DOID:2643","ONCOTREE:PECOMA","GARD:22383","UMLS:C1300127"],"synonyms":[{"name":"PEComa","type":"exact"},{"name":"neoplasm with perivascular epithelioid cell differentiation","type":"exact"},{"name":"perivascular epithelioid cell neoplasm","type":"exact"},{"name":"perivascular epithelioid cell tumor","type":"exact"},{"name":"perivascular epithelioid cell tumour","type":"exact"},{"name":"tumor with perivascular epithelioid cell differentiation","type":"exact"},{"name":"tumour with perivascular epithelioid cell differentiation","type":"exact"}],"termid":"MONDO:0006359","terms_by_termid":{"MONDO:0011705":null},"xrefs":{"Monarch":{"xref_id":"0006359"}}}


