# terms

id: GO:0072727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a CCCP stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to CCCP (obsolete GO:0072727)","synonyms":[{"name":"cellular response to carbonyl cyanide m-chlorophenyl hydrazone","type":"exact"}],"termid":"GO:0072727"}


id: GO:0095500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of an acetylcholine receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic signal transduction","termid":"GO:0098926"},{"relation_name":"part_of","term_name":"cellular response to acetylcholine","termid":"GO:1905145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"acetylcholine receptor signaling pathway","synonyms":[{"name":"acetylcholine receptor signalling pathway","type":"exact"}],"termid":"GO:0095500"}


id: PBO:0054181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1555","termid":"PBO:0054181"}


id: GO:0062022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The ATP-dependent protein localization to chromatin by which a cohesin ring complex is topologically linked to ssDNA (lagging strand) which is already linked to a dsDNA (leading strand) molecule as part of the mitotic cell cycle.","definition_xrefs":["GOC:vw","PMID:29358048"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic cohesin ssDNA (lagging strand) loading (obsolete GO:0062022)","synonyms":[{"name":"second-DNA capture","type":"exact"}],"termid":"GO:0062022"}


id: SO:0001547
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that decreases transcript stability with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_stability_variant","termid":"SO:0001546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased_transcript_stability_variant","synonyms":[{"name":"decrease transcript stability variant","type":"exact"}],"termid":"SO:0001547"}


id: GO:0102517
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (9Z)-octadecenoate + AH2 + O2 = (12R)-hydroxy-(9Z)-octadecenoate + acceptor + H2O.","definition_xrefs":["RHEA:55956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oleate 12-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14487"],"termid":"GO:0102517"}


id: PATO:0002106
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of its lacking most of the cellular characteristics which would allow it to be fully differentiated.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"differentiated","termid":"PATO:0002099"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poorly differentiated","termid":"PATO:0002106"}


id: MONDO:1011187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scoliosis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scoliosis, non-human animal","termid":"MONDO:1010302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scoliosis, dog","secondary_identifiers":["OMIA:000891-9615"],"termid":"MONDO:1011187","xrefs":{"Monarch":{"xref_id":"1011187"}}}


id: PBO:0074689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 68B","termid":"PBO:0074689"}


id: GO:0032509
data:
  {"annotated_genes":["SJAG_04024","SJAG_02117","SJAG_04912","SJAG_04070","SJAG_04936","SJAG_01281","SJAG_00900","SJAG_03756","SJAG_04047","SJAG_03892","SJAG_01686","SJAG_02234","SJAG_00416","SJAG_01981","SJAG_00821","SJAG_05303","SJAG_04489","SJAG_04643","SJAG_04349","SJAG_02349","SJAG_02912","SJAG_07012","SJAG_02584","SJAG_03511","SJAG_01242","SJAG_04822","SJAG_05207","SJAG_01586","SJAG_03783","SJAG_03250"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119535],"is_not":false,"summary":null,"term":"GO:0032509"},{"annotations":[105079,106057,109086,100599,77756,100781,81028,112184,72462,77077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032511"},{"annotations":[80253,108519,89986,111350,72850,97866,93385,75262,79982,75283,72680,99872,102816,73921,73885,79516,89814,116709,93524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043328"}]},"cv_name":"biological_process","definition":"The directed movement of substances from endosomes to lysosomes or vacuoles by a pathway in which molecules are sorted into multivesicular bodies, which then fuse with the target compartment.","definition_xrefs":["PMID:16689637","PMID:12461556","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosomal transport","termid":"GO:0016197"},{"relation_name":"is_a","term_name":"multivesicular body sorting pathway","termid":"GO:0071985"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00821":null,"SJAG_00900":null,"SJAG_01242":null,"SJAG_01281":null,"SJAG_01586":null,"SJAG_01686":null,"SJAG_01981":null,"SJAG_02117":null,"SJAG_02234":null,"SJAG_02349":null,"SJAG_02584":null,"SJAG_02912":null,"SJAG_03250":null,"SJAG_03511":null,"SJAG_03756":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04024":null,"SJAG_04047":null,"SJAG_04070":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04643":null,"SJAG_04822":null,"SJAG_04912":null,"SJAG_04936":null,"SJAG_05207":null,"SJAG_05303":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"endosome transport via multivesicular body sorting pathway","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"endosome transport via MVB sorting pathway","type":"exact"}],"termid":"GO:0032509","terms_by_termid":{"GO:0032509":null,"GO:0032511":null,"GO:0043328":null}}


id: PBO:0072979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 2B member 3, pseudogene","termid":"PBO:0072979"}


id: PBO:0054640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2045","termid":"PBO:0054640"}


id: GO:1904473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-dopa stimulus.","definition_xrefs":["PMID:25044243","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"},{"relation_name":"is_a","term_name":"response to L-phenylalanine derivative","termid":"GO:1904386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-dopa","termid":"GO:1904473"}


id: GO:0072584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An endocytosis process that begins when material is taken up into plasma membrane caveolae, which then pinch off to form endocytic caveolar carriers.","definition_xrefs":["PMID:17318224","GOC:BHF","GOC:mah","PMID:9234965","PMID:18498251","PMID:8970738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytosis","termid":"GO:0006897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"caveolin-mediated endocytosis","synonyms":[{"name":"caveolae-dependent endocytosis","type":"exact"},{"name":"caveolae-mediated endocytosis","type":"exact"},{"name":"caveolin-dependent endocytosis","type":"exact"}],"termid":"GO:0072584"}


id: FYPO:0005036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation","termid":"FYPO:0002678"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during nitrogen starvation","termid":"FYPO:0005033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein phosphorylation during nitrogen starvation","synonyms":[{"name":"abolished protein phosphorylation during cellular response to nitrogen starvation","type":"exact"},{"name":"abolished protein phosphorylation during nitrogen deprivation","type":"exact"},{"name":"protein phosphorylation abolished during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005036"}


id: PBO:0044317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b-245 chaperone 1","termid":"PBO:0044317"}


id: PBO:0042384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD276 molecule","termid":"PBO:0042384"}


id: PBO:0059890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 13","termid":"PBO:0059890"}


id: MONDO:0017333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypomyelinating leukodystrophy with or without oligondontia and/or hypogonadism (obsolete MONDO:0017333)","termid":"MONDO:0017333","xrefs":{"Monarch":{"xref_id":"0017333"}}}


id: PBO:0035846
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_iMTOC","termid":"PBO:0035846"}


id: GO:0016111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving polyterpenoid compounds, terpenoids with more than eight isoprene units.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"polyterpenoid metabolic process","synonyms":[{"name":"polyterpene metabolic process","type":"narrow"},{"name":"polyterpene metabolism","type":"narrow"},{"name":"polyterpenoid metabolism","type":"exact"}],"termid":"GO:0016111"}


id: PBO:0050216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 33","termid":"PBO:0050216"}


id: PBO:0083252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; identified by homology to related yeast","termid":"PBO:0083252"}


id: PBO:0071984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 13","termid":"PBO:0071984"}


id: GO:1904397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neuromuscular junction development.","definition_xrefs":["GOC:TermGenie","PMID:7722643","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuromuscular junction development","termid":"GO:1904396"},{"relation_name":"is_a","term_name":"negative regulation of synapse organization","termid":"GO:1905809"},{"relation_name":"negatively_regulates","term_name":"neuromuscular junction development","termid":"GO:0007528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuromuscular junction development","synonyms":[{"name":"down regulation of NMJ stability","type":"related"},{"name":"down regulation of neuromuscular junction development","type":"exact"},{"name":"down regulation of neuromuscular junction organization","type":"exact"},{"name":"down regulation of neuromuscular junction stability","type":"related"},{"name":"down-regulation of NMJ stability","type":"related"},{"name":"down-regulation of neuromuscular junction development","type":"exact"},{"name":"down-regulation of neuromuscular junction organization","type":"exact"},{"name":"down-regulation of neuromuscular junction stability","type":"related"},{"name":"downregulation of NMJ stability","type":"related"},{"name":"downregulation of neuromuscular junction development","type":"exact"},{"name":"downregulation of neuromuscular junction organization","type":"exact"},{"name":"downregulation of neuromuscular junction stability","type":"related"},{"name":"inhibition of NMJ stability","type":"related"},{"name":"inhibition of neuromuscular junction development","type":"narrow"},{"name":"inhibition of neuromuscular junction organization","type":"narrow"},{"name":"inhibition of neuromuscular junction stability","type":"related"},{"name":"negative regulation of NMJ stability","type":"related"},{"name":"negative regulation of neuromuscular junction organization","type":"exact"},{"name":"negative regulation of neuromuscular junction stability","type":"related"}],"termid":"GO:1904397"}


id: MONDO:0001591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"entropion","termid":"MONDO:0001519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"senile entropion","secondary_identifiers":["UMLS:C0155188","SCTID:55408009","MEDGEN:509837","DOID:12836","ICD9:374.01"],"synonyms":[{"name":"involutional entropion","type":"exact"}],"termid":"MONDO:0001591","xrefs":{"Monarch":{"xref_id":"0001591"}}}


id: MONDO:0006292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm of the pleura or peritoneum, arising from mesothelial cells. It is associated with exposure to asbestos.","definition_xrefs":["NCIT:C4456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"mesothelioma","termid":"MONDO:0005065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant mesothelioma","secondary_identifiers":["icd11.foundation:369414280","MEDGEN:91062","EFO:1000355","GARD:7026","DOID:1790","MESH:C562839","HP:0100001","MedDRA:10027406","Orphanet:50251","ICDO:9050/3","ICD9:199.1","OMIM:156240","SCTID:109378008","UMLS:C0345967"],"synonyms":[{"name":"MESOM","type":"related"},{"name":"advanced malignant mesothelioma","type":"narrow"},{"name":"asbestos-related malignant mesothelioma","type":"narrow"},{"name":"diffuse malignant mesothelioma","type":"narrow"},{"name":"malignant mesothelial neoplasm","type":"narrow"},{"name":"malignant mesothelial tumor","type":"exact"},{"name":"malignant mesothelial tumour","type":"exact"},{"name":"malignant mesothelioma","type":"exact"},{"name":"malignant mesothelioma (disease)","type":"exact"},{"name":"malignant neoplasm of mesothelium","type":"exact"},{"name":"malignant neoplasm of the mesothelium","type":"exact"},{"name":"malignant tumor of mesothelium","type":"exact"},{"name":"malignant tumor of the mesothelium","type":"exact"},{"name":"malignant tumour of mesothelium","type":"exact"},{"name":"malignant tumour of the mesothelium","type":"exact"},{"name":"mesothelioma, malignant","type":"exact"},{"name":"mesothelioma, somatic","type":"exact"}],"termid":"MONDO:0006292","xrefs":{"Monarch":{"xref_id":"0006292"}}}


id: PBO:0051920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 3 binding protein","termid":"PBO:0051920"}


id: PBO:0087892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription coactivator; component of the ADA and SAGA transcriptional adaptor/HAT (histone acetyltransferase) complexes","termid":"PBO:0087892"}


id: GO:0070601
data:
  {"annotated_genes":["SJAG_03989","SJAG_04699","SJAG_03418","SJAG_03926","SJAG_04126","SJAG_03681","SJAG_04259","SJAG_01601","SJAG_00600","SJAG_00229","SJAG_03353","SJAG_01805","SJAG_01082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106439,115779,101038,95682,103727,115219,117904,103200,116497,109782],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990813"},{"annotations":[66079,72310,92796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051754"},{"annotations":[101040,92798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071962"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the sister chromatids of a replicated chromosome are joined along the length of the centromeric region of the chromosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sister chromatid cohesion","termid":"GO:0007062"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00600":null,"SJAG_01082":null,"SJAG_01601":null,"SJAG_01805":null,"SJAG_03353":null,"SJAG_03418":null,"SJAG_03681":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"centromeric sister chromatid cohesion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"sister chromatid cohesion at centromere","type":"exact"}],"termid":"GO:0070601","terms_by_termid":{"GO:0051754":null,"GO:0071962":null,"GO:1990813":null}}


id: SO:0000945
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that results from recombination between attP_site and attB_site, composed of the 5' portion of attP_site and the 3' portion of attB_site.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integration_excision_site","termid":"SO:0000946"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attR_site","synonyms":[{"name":"attPB'","type":"related"},{"name":"attR site","type":"exact"}],"termid":"SO:0000945"}


id: GO:0099503
data:
  {"annotated_genes":["SJAG_01189","SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[117468,89740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070382"}]},"cv_name":"cellular_component","definition":"A cytoplasmic, membrane bound vesicle that is capable of fusing to the plasma membrane to release its contents into the extracellular space.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01189":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"secretory vesicle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099503","terms_by_termid":{"GO:0070382":null}}


id: PBO:0045049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide dehydrogenase","termid":"PBO:0045049"}


id: MONDO:0700263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any type 1 interferonopathies in which the cause of the disease is a variation in the RNU7-1 gene. Individuals with variants in RNUF7-1 can present with a variety of phenotypes, including Aicardi-Goutieres syndrome.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"type 1 interferonopathy","termid":"MONDO:0700264"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNU7-1-related type 1 interferonopathy","termid":"MONDO:0700263","xrefs":{"Monarch":{"xref_id":"0700263"}}}


id: PBO:0051951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-trisphosphate 3-kinase C","termid":"PBO:0051951"}


id: FYPO:0000753
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione gamma-glutamylcysteinyltransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal glutathione gamma-glutamylcysteinyltransferase activity","termid":"FYPO:0000753"}


id: GO:0060152
data:
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id: MONDO:0011220
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id: GO:0043311
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id: GO:0044799
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id: PBO:0109838
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id: PBO:0070228
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id: PBO:0055215
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id: GO:0021945
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id: PBO:0071822
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id: GO:0000146
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id: GO:0019321
data:
  {"annotated_genes":["SJAG_03958","SJAG_04660","SJAG_03174","SJAG_00070","SJAG_02010","SJAG_04276"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96918,103109,97652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019568"},{"annotations":[58918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019303"},{"annotations":[76296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006014"},{"annotations":[97653,96920,103110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042843"},{"annotations":[66986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042732"},{"annotations":[121057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005998"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a pentose, any monosaccharide with a chain of five carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_02010":null,"SJAG_03174":null,"SJAG_03958":null,"SJAG_04276":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"pentose metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"pentose metabolism","type":"exact"}],"termid":"GO:0019321","terms_by_termid":{"GO:0005998":null,"GO:0006014":null,"GO:0019303":null,"GO:0019568":null,"GO:0042732":null,"GO:0042843":null}}


id: MONDO:1010481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetralogy of fallot that occurs in snow leopard.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetralogy of fallot, non-human animal","termid":"MONDO:1010021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetralogy of fallot, snow leopard","secondary_identifiers":["OMIA:000994-29064"],"termid":"MONDO:1010481","xrefs":{"Monarch":{"xref_id":"1010481"}}}


id: GO:0032032
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the tail region of a myosin I heavy chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin tail binding","termid":"GO:0032029"},{"relation_name":"is_a","term_name":"myosin I heavy chain binding","termid":"GO:0032037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008092","GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"myosin I tail binding","termid":"GO:0032032"}


id: PBO:0085343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipase; contains lipase specific GXSXG motif; maintains lipid droplet (LD) morphology; induced by transcription factor Rpn4p; protein abundance increases in response to DNA replication stress","termid":"PBO:0085343"}


id: PBO:0062580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily G member 4","termid":"PBO:0062580"}


id: PBO:0070313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 2","termid":"PBO:0070313"}


id: MONDO:0005963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition resulting from infection with the second stage larvae of the parasite Spirometra.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cestode infectious disease","termid":"MONDO:0042488"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sparganosis","secondary_identifiers":["SCTID:31659000","UMLS:C0037753","MEDGEN:52426","ICD9:123.5","DOID:10080","ICD10CM:B70.1","EFO:0007488","icd11.foundation:22873958","MESH:D013031","NCIT:C35030"],"synonyms":[{"name":"Spirometra caused disease or disorder","type":"exact"},{"name":"Spirometra disease or disorder","type":"exact"},{"name":"Spirometra infectious disease","type":"exact"},{"name":"infection by sparganum","type":"exact"},{"name":"sparganosis [larval diphyllobothriasis]","type":"exact"}],"termid":"MONDO:0005963","xrefs":{"Monarch":{"xref_id":"0005963"}}}


id: GO:0043843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP + D-glucose = AMP + D-glucose 6-phosphate.","definition_xrefs":["EC:2.7.1.147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"ADP-specific glucokinase activity","secondary_identifiers":["Reactome:R-HSA-5696021","RHEA:11460"],"synonyms":[{"name":"ADP-dependent glucokinase activity","type":"related"},{"name":"ADP:D-glucose 6-phosphotransferase activity","type":"related"}],"termid":"GO:0043843"}


id: MONDO:0017292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Well-differentiated fetal adenocarcinoma (WDFA) of the lung is a rare, primary, low-grade, bronchopulmonary neoplasm characterized by a well-circumscribed, usually large, pulmonary mass that is histologically composed of glycogen-rich neoplastic glands and tubules that resemble fetal lungs at 10 to 16 weeks of gestation and benign adjacent stroma. It typically presents with chest pain, cough, dyspnea, hemoptysis and/or generalized, non-specific symptoms, such as night sweats, lethargy, poor appetite and weight loss.","definition_xrefs":["Orphanet:284395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung adenocarcinoma","termid":"MONDO:0005061"},{"relation_name":"is_a","term_name":"tubular adenocarcinoma","termid":"MONDO:0005606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"well-differentiated fetal adenocarcinoma of the lung","secondary_identifiers":["MEDGEN:843585","NCIT:C45509","GARD:21120","ICDO:8333/3","UMLS:C3873372"],"synonyms":[{"name":"WDFA","type":"exact"},{"name":"fetal adenocarcinoma","type":"exact"},{"name":"fetal lung adenocarcinoma","type":"exact"},{"name":"foetal adenocarcinoma","type":"exact"},{"name":"foetal lung adenocarcinoma","type":"exact"},{"name":"pulmonary adenocarcinoma of fetal type","type":"exact"},{"name":"pulmonary adenocarcinoma of foetal type","type":"exact"},{"name":"pulmonary endodermal tumor resembling fetal lung","type":"exact"},{"name":"pulmonary endodermal tumour resembling foetal lung","type":"exact"},{"name":"well-differentiated fetal lung adenocarcinoma","type":"exact"},{"name":"well-differentiated foetal lung adenocarcinoma","type":"exact"}],"termid":"MONDO:0017292","xrefs":{"Monarch":{"xref_id":"0017292"}}}


id: MONDO:0005625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sequestration of Plasmodium falciparum in the brain, which can cause coma and/or seizures.","definition_xrefs":["NCIT:C128373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malaria","termid":"MONDO:0005136"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"central nervous system infectious disorder","termid":"MONDO:0024619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"cerebral malaria","secondary_identifiers":["EFO:0006857","ICD9:084.9","UMLS:C0024534","MESH:D016779","DOID:14069","SCTID:53622003","Wikipedia:Malaria","MEDGEN:44258"],"synonyms":[{"name":"malarial encephalitis","type":"exact"}],"termid":"MONDO:0005625","xrefs":{"Monarch":{"xref_id":"0005625"}}}


id: FYPO:0004730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the lateral cell cortex is observed there. The lateral cell cortex is the region directly beneath the plasma membrane of the lateral portion of the cell.","definition_xrefs":["PomBase:mah","GO:0097575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"output_of","term_name":"abnormal protein localization to lateral cell cortex","termid":"FYPO:0007869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"protein mislocalized to lateral cell cortex","synonyms":[{"name":"ectopic protein localization to lateral cell cortex","type":"exact"},{"name":"protein mislocalised to lateral cell cortex","type":"exact"},{"name":"protein mislocalised to lateral cell cortex during vegetative growth","type":"exact"},{"name":"protein mislocalized to cell side during vegetative growth","type":"related"},{"name":"protein mislocalized to lateral cell cortex during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to lateral cell cortex during vegetative growth","type":"exact"},{"name":"protein mislocalized to lateral cortex","type":"exact"}],"termid":"FYPO:0004730"}


id: PBO:0048970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch domain and ankyrin repeats 1","termid":"PBO:0048970"}


id: PBO:0049309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase pi 1","termid":"PBO:0049309"}


id: MONDO:1010870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any mucopolysaccharidosis that occurs in cats due to a mutation in the ARSB gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis or mucopolysaccharidosis-like disorder, non-human animal","termid":"MONDO:1012581"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucopolysaccharidosis, ARSB-related, domestic cat","secondary_identifiers":["OMIA:000666-9685"],"synonyms":[{"name":"mucopolysaccharidosis VI, domestic cat","type":"related"}],"termid":"MONDO:1010870","xrefs":{"Monarch":{"xref_id":"1010870"}}}


id: GO:0021684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the cerebellar granule layer. This process pertains to the initial formation of a structure from unspecified parts. The granular layer is the innermost layer of the cerebellar cortex. This layer contains densely packed small neurons, mostly granule cells. Some Golgi cells are found at the outer border. Granule neurons send parallel fibers to the upper molecular layer, where they synapse with Purkinje cell dendrites. Mossy fibers from the pontine nuclei in the white matter synapse with granule cell axons, Golgi cell axons and unipolar brush interneuron axons at cerebellar glomeruli in the granule cell layer.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:cls","GOC:jid","ISBN:0838580343","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cerebellar granular layer morphogenesis","termid":"GO:0021683"},{"relation_name":"part_of","term_name":"cerebellar cortex formation","termid":"GO:0021697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar granular layer formation","termid":"GO:0021684"}


id: FYPO:0008305
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of meiotic recombination between alleles on different sister chromatids (inter-sister recombination) is increased.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased meiotic recombination","termid":"FYPO:0000487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"increased inter-sister chromatid meiotic recombination","termid":"FYPO:0008305"}


id: GO:0035788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another that will contribute to the progression of the metanephric kidney over time, from its formation to the mature organ.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in kidney development","termid":"GO:0035787"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in metanephros development","synonyms":[{"name":"cell migration involved in metanephric kidney development","type":"exact"}],"termid":"GO:0035788"}


id: GO:1990470
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to piRNA clusters, double-stranded DNA regions that give rise to PIWI-interacting RNAs (piRNAs).","definition_xrefs":["PMID:24906153","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"piRNA cluster binding","termid":"GO:1990470"}


id: GO:0008375
data:
  {"annotated_genes":["SJAG_02804","SJAG_03066","SJAG_06383","SJAG_04881","SJAG_04868","SJAG_04119","SJAG_02913","SJAG_00442","SJAG_03311","SJAG_04821"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76210,76000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004100"},{"annotations":[64339,100595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004577"},{"annotations":[79242,94969,110551,113586,94879,119249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017176"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to a sugar.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03311":null,"SJAG_04119":null,"SJAG_04821":null,"SJAG_04868":null,"SJAG_04881":null,"SJAG_06383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"acetylglucosaminyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9683648","Reactome:R-HSA-8879117","Reactome:R-HSA-5694487","Reactome:R-HSA-9694656"],"synonyms":[{"name":"GlcNAc transferase activity","type":"exact"}],"termid":"GO:0008375","terms_by_termid":{"GO:0004100":null,"GO:0004577":null,"GO:0017176":null}}


id: PBO:0055004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2419","termid":"PBO:0055004"}


id: GO:0070807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phialide development, a process that leads to the formation of phialides. Phialides are specialized cells that bud from the ends of metulae on the conidiophore tip.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of phialide development","termid":"GO:0070805"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"phialide development","termid":"GO:0070790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phialide development","termid":"GO:0070807"}


id: PBO:0117082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLXNA4 antisense RNA 2","termid":"PBO:0117082"}


id: PBO:0015256
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by hamster Dpagt1","termid":"PBO:0015256"}


id: PR:O13688
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nse6 gene.","definition_xrefs":["UniProtKB:O13688","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-structural maintenance of chromosome element 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.08c","synonyms":[{"name":"Spom972h-nse6","type":"exact"},{"name":"core protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"non-SMC element 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13688"}


id: GO:0042859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the siderophore chrysobactin (alpha-N-(2,3-dihydroxybenzoyl)-D-lysyl-L-serine).","definition_xrefs":["PMID:8837459","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound catabolic process","termid":"GO:0019614"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"},{"relation_name":"is_a","term_name":"chrysobactin metabolic process","termid":"GO:0042857"},{"relation_name":"is_a","term_name":"siderophore catabolic process","termid":"GO:0046215"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"primary amino compound catabolic process","termid":"GO:1901161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"chrysobactin catabolic process","synonyms":[{"name":"chrysobactin breakdown","type":"exact"},{"name":"chrysobactin catabolism","type":"exact"},{"name":"chrysobactin degradation","type":"exact"}],"termid":"GO:0042859"}


id: GO:0099009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The circularization of a viral genome following infection of a host cell. This is common amongst bacterial viruses to protect the viral genome ends from nucleases, to convert the linear genome to an integrative precursor or to give rise to the replicative form of the genome. It can be mediated by covalent closure of the DNA sticky ends, recombinaison between redundant terminal sequences or via the binding of a protein at the viral DNA extremities.","definition_xrefs":["PMID:19523475","PMID:319596","PMID:15489417","VZ:3968","PMID:11894948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral genome circularization","termid":"GO:0099009"}


id: PR:Q9UT19
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.09","secondary_identifiers":["UniProtKB:Q9UT19"],"synonyms":[{"name":"Spom972h-metE","type":"exact"},{"name":"cobalamin-independent methionine synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"methionine synthase, vitamin-B12 independent isozyme (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT19"}


id: GO:1904227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of glycogen synthase activity, transferring glucose-1-phosphate.","definition_xrefs":["GOC:rl","GO_REF:0000059","GOC:BHF","GOC:TermGenie","PMID:17569761"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of glycogen synthase activity, transferring glucose-1-phosphate (obsolete GO:1904227)","synonyms":[{"name":"down regulation of glycogen synthase activity, transferring glucose-1-phosphate","type":"exact"},{"name":"down-regulation of glycogen synthase activity, transferring glucose-1-phosphate","type":"exact"},{"name":"downregulation of glycogen synthase activity, transferring glucose-1-phosphate","type":"exact"},{"name":"inhibition of glycogen synthase activity, transferring glucose-1-phosphate","type":"narrow"}],"termid":"GO:1904227"}


id: MONDO:0019651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic steroid-sensitive nephrotic syndrome","termid":"MONDO:0019067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"idiopathic steroid-sensitive nephrotic syndrome with diffuse mesangial proliferation","secondary_identifiers":["Orphanet:93209"],"termid":"MONDO:0019651","xrefs":{"Monarch":{"xref_id":"0019651"}}}


id: GO:2000954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyclodextrin metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"regulates","term_name":"cyclodextrin metabolic process","termid":"GO:2000900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of cyclodextrin metabolic process","synonyms":[{"name":"regulation of cyclodextrin metabolism","type":"exact"}],"termid":"GO:2000954"}


id: FYPO:0002616
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the pre-autophagosomal structure is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to pre-autophagosomal structure","termid":"FYPO:0002614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to pre-autophagosomal structure","synonyms":[{"name":"increased protein localisation to pre-autophagosomal structure","type":"exact"},{"name":"increased protein localization to PAS","type":"exact"},{"name":"increased protein localization to pre-autophagosomal structure during mitotic cell cycle","type":"related"},{"name":"increased protein localization to pre-autophagosomal structure during vegetative growth","type":"exact"}],"termid":"FYPO:0002616"}


id: PBO:0041347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 80","termid":"PBO:0041347"}


id: FYPO:0001949
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in the cytosol is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular calcium level","termid":"FYPO:0001198"},{"relation_name":"is_a","term_name":"increased level of substance in cytosol","termid":"FYPO:0001948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cytosolic calcium level","synonyms":[{"name":"increased cytosolic calcium ion level","type":"exact"},{"name":"increased cytosolic calcium ion level during vegetative growth","type":"exact"},{"name":"increased cytosolic calcium level during mitotic cell cycle","type":"related"},{"name":"increased level of calcium ions in cytosol","type":"exact"},{"name":"increased levels of free cytosolic calcium","type":"exact"}],"termid":"FYPO:0001949"}


id: PATO:0002321
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"superelliptic","termid":"PATO:0002318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoelliptic","termid":"PATO:0002321"}


id: PBO:0002677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome-c reductase complex subunit 7","termid":"PBO:0002677"}


id: MONDO:0043895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Harm or hurt to the ankle or ankle joint usually inflicted by an external source.","definition_xrefs":["MESH:D016512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"injury","termid":"MONDO:0021178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankle injury","secondary_identifiers":["SCTID:125603006"],"synonyms":[{"name":"Injuries, ankle","type":"related"},{"name":"Injuries, syndesmotic","type":"related"},{"name":"Sprains, ankle","type":"related"},{"name":"ankle Sprains","type":"related"},{"name":"ankle injury","type":"exact"},{"name":"ankle sprain","type":"related"},{"name":"injury of ankle","type":"exact"},{"name":"injury of tarsal region","type":"exact"},{"name":"injury, ankle","type":"related"},{"name":"injury, syndesmotic","type":"related"},{"name":"sprain, ankle","type":"related"},{"name":"syndesmotic Injuries","type":"related"},{"name":"syndesmotic injury","type":"related"},{"name":"tarsal region injury","type":"exact"}],"termid":"MONDO:0043895","xrefs":{"Monarch":{"xref_id":"0043895"}}}


id: PBO:0068151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 458","termid":"PBO:0068151"}


id: PBO:0060951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFIL3 like basic leucine zipper","termid":"PBO:0060951"}


id: PBO:0029181
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_trehalose_level_during_heat_shock","termid":"PBO:0029181"}


id: GO:0046195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 4-nitrophenol, a nitroaromatic compound which is used in the production of dyes, leather treatment agents, fungicides and as an intermediate in the production of the insecticide parathion.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-nitrophenol biosynthetic process (obsolete GO:0046195)","synonyms":[{"name":"4-nitrophenol anabolism","type":"exact"},{"name":"4-nitrophenol biosynthesis","type":"exact"},{"name":"4-nitrophenol biosynthetic process","type":"exact"},{"name":"4-nitrophenol formation","type":"exact"},{"name":"4-nitrophenol synthesis","type":"exact"}],"termid":"GO:0046195"}


id: MONDO:0958116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"},{"relation_name":"is_a","term_name":"hyper-IgE syndrome","termid":"MONDO:0018037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"autosomal recessive combined immunodeficiency due to partial IL6ST deficiency","secondary_identifiers":["UMLS:C5925106","Orphanet:656300","MEDGEN:1863929"],"termid":"MONDO:0958116","xrefs":{"Monarch":{"xref_id":"0958116"}}}


id: PBO:0039928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 33","termid":"PBO:0039928"}


id: MOD:00838
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes three (1)H protium atoms with three (2)H deuterium atoms to produce 3x(2)H labeled L-leucine.","definition_xrefs":["Unimod:262#L"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deuterium trisubstituted residue","termid":"MOD:00585"},{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3x(2)H labeled L-leucine","synonyms":[{"name":"D(H)3Leu","type":"exact"},{"name":"Label:2H(3)","type":"related"},{"name":"Trideuteration","type":"related"}],"termid":"MOD:00838"}


id: GO:0034000
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endolytic cleavage of beta-1,4-galactosaminic bonds between N-acetylgalactosamine and either D-glucuronic acid or L-iduronic acid to produce a mixture of Delta4-unsaturated oligosaccharides of different sizes that are ultimately degraded to Delta4-unsaturated tetra- and disaccharides.","definition_xrefs":["EC:4.2.2.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"chondroitin-sulfate-ABC endolyase activity","synonyms":[{"name":"ChS ABC lyase I activity","type":"related"},{"name":"ChS ABC lyase activity","type":"broad"},{"name":"chondroitin ABC eliminase activity","type":"broad"},{"name":"chondroitin sulfate ABC endoeliminase activity","type":"related"},{"name":"chondroitin sulfate ABC endolyase activity","type":"related"},{"name":"chondroitin sulfate ABC lyase activity","type":"broad"},{"name":"chondroitinase ABC activity","type":"broad"},{"name":"chondroitinase activity","type":"broad"}],"termid":"GO:0034000"}


id: PBO:0030895
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localization_phenotype_during_vegetative_growth","termid":"PBO:0030895"}


id: FYPO:0004650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle microtubule depolymerization, i.e. the removal of tubulin dimers from a microtubule in the mitotic spindle, occurs to a lesser extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased microtubule depolymerization during vegetative growth","termid":"FYPO:0005682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000054","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitotic spindle microtubule depolymerization","synonyms":[{"name":"decreased mitotic spindle microtubule catastrophe","type":"related"},{"name":"decreased mitotic spindle microtubule depolymerisation","type":"exact"},{"name":"decreased mitotic spindle microtubule depolymerization during vegetative growth","type":"exact"},{"name":"decreased mitotic spindle microtubule shrinkage","type":"related"},{"name":"decreased spindle microtubule depolymerization during mitotic cell cycle","type":"exact"},{"name":"reduced mitotic spindle microtubule depolymerization","type":"exact"}],"termid":"FYPO:0004650"}


id: PR:Q09851
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A retinol dehydrogenase 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent 1-acyldihydroxyacetone phosphate reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.11","secondary_identifiers":["UniProtKB:Q09851"],"synonyms":[{"name":"1-acyl DHAP reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ADR (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC23D3.11","type":"related"},{"name":"Spom972h-RDH8","type":"exact"},{"name":"acyl/alkyl DHAP reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"acylglycerone-phosphate reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09851"}


id: GO:0009474
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nonaheme cytochrome c (obsolete GO:0009474)","synonyms":[{"name":"nonaheme cytochrome c","type":"exact"}],"termid":"GO:0009474"}


id: MONDO:0002759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A verrucous carcinoma that involves the urinary bladder.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder squamous cell carcinoma","termid":"MONDO:0002760"},{"relation_name":"is_a","term_name":"verrucous carcinoma","termid":"MONDO:0006006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder verrucous carcinoma","secondary_identifiers":["DOID:3741","MEDGEN:267376","NCIT:C39832","UMLS:C1511208"],"synonyms":[{"name":"bladder verrucous carcinoma","type":"exact"},{"name":"bladder verrucous squamous cell carcinoma","type":"exact"},{"name":"urinary bladder verrucous carcinoma","type":"exact"}],"termid":"MONDO:0002759","xrefs":{"Monarch":{"xref_id":"0002759"}}}


id: PBO:0065732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain containing 3B","termid":"PBO:0065732"}


id: GO:0061586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription using a mechanism that involves the localization of a transcription factor.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0008150","GO:0006351","GO:0051179"],"is_obsolete":false,"name":"positive regulation of transcription by transcription factor localization","termid":"GO:0061586"}


id: GO:0098872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled neurotransmitter receptor activity occurring in the postsynaptic membrane, that is involved in regulating the cytosolic concentration of calcium ions in the postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled neurotransmitter receptor activity","termid":"GO:0099528"},{"relation_name":"is_a","term_name":"neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration","termid":"GO:0099583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration","synonyms":[{"name":"G-protein coupled neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"G-protein coupled neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:0098872"}


id: PBO:0045446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPYD antisense RNA 2","termid":"PBO:0045446"}


id: PATO:0002328
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angle which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased position","termid":"PATO:0001476"},{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased angle to","termid":"PATO:0002328"}


id: GO:0005071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane receptor protein serine/threonine kinase signaling protein activity (obsolete GO:0005071)","synonyms":[{"name":"transmembrane receptor protein serine/threonine kinase signaling protein activity","type":"exact"},{"name":"transmembrane receptor protein serine/threonine kinase signalling protein activity","type":"exact"}],"termid":"GO:0005071"}


id: PBO:0001757
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"co-expressed with adjacent gene","termid":"PBO:0001757"}


id: PBO:0073544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain and tetratricopeptide repeats 2","termid":"PBO:0073544"}


id: PBO:0062722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily T member 1","termid":"PBO:0062722"}


id: PBO:0072308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 5","termid":"PBO:0072308"}


id: GO:0032180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of ubiquinone, beginning with the conversion of tyrosine to 4-hydroxybenzoate.","definition_xrefs":["GOC:mah","PMID:11583838"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquinone biosynthetic process from tyrosine (obsolete GO:0032180)","termid":"GO:0032180"}


id: PR:O13768
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TFIIH basal transcription factor complex helicase XPB subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00720","PRO:DNx","PANTHER:PTHR11274:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair helicase ercc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.06","secondary_identifiers":["UniProtKB:O13768"],"synonyms":[{"name":"Spom972h-ERCC3","type":"exact"}],"termid":"PR:O13768"}


id: SO:0001931
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA sequence produced from some base calling or alignment algorithm which uses aligned or assembled multiple gDNA sequences as input.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"consensus_region","termid":"SO:0000994"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"consensus_gDNA","synonyms":[{"name":"consensus gDNA","type":"exact"},{"name":"consensus genomic DNA","type":"exact"}],"termid":"SO:0001931"}


id: FYPO:0006372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosomes or sister chromatids do not separate completely during meiosis I or meiosis II, and partially separated DNA masses are connected by one or more bridges formed of chromatin.","definition_xrefs":["PMID:29123917","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"incomplete meiotic chromosome segregation, with chromosomal bridge","synonyms":[{"name":"abnormal meiotic chromosome segregation, with chromosomal bridge","type":"exact"},{"name":"incomplete chromosome segregation, with chromosomal bridge, during meiosis","type":"exact"},{"name":"incomplete meiotic chromosome segregation, with chromatin bridge","type":"exact"}],"termid":"FYPO:0006372"}


id: SO:0000075
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a gene when the 3' region overlaps with another gene's 3' region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlapping","termid":"SO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_three_prime_overlap","synonyms":[{"name":"three prime-three prime overlap","type":"exact"}],"termid":"SO:0000075"}


id: GO:0060217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the characteristics of a mature hemangioblast. Hemangioblasts are the proposed common precursor of blood and endothelial lineages.","definition_xrefs":["GOC:bf","GOC:dph","PMID:15378083","PMID:9670018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell differentiation","termid":"GO:0048333"},{"relation_name":"part_of","term_name":"primitive hemopoiesis","termid":"GO:0060215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemangioblast cell differentiation","termid":"GO:0060217"}


id: GO:0071090
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaIIb-beta3 integrin complex bound to fibronectin and tissue transglutaminase.","definition_xrefs":["PMID:10684262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alphaIIb-beta3 integrin-fibronectin-tissue transglutaminase complex","synonyms":[{"name":"ITGA2b-ITGB3-FN1-TGM2 complex","type":"narrow"}],"termid":"GO:0071090"}


id: MONDO:0015973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic coagulation disorder (obsolete MONDO:0015973)","termid":"MONDO:0015973","xrefs":{"Monarch":{"xref_id":"0015973"}}}


id: PBO:0038957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adipogenesis regulatory factor","termid":"PBO:0038957"}


id: MONDO:0017103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare genetic developmental defect during embryogenesis (obsolete MONDO:0015960)","termid":"MONDO:0015960"},{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic nervous system disorder (obsolete MONDO:0019117)","termid":"MONDO:0019117"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephaloclastic disorder","secondary_identifiers":["Orphanet:269190","UMLS:C5680772","icd11.foundation:1436588898","MEDGEN:1843179","GARD:20987"],"termid":"MONDO:0017103","xrefs":{"Monarch":{"xref_id":"0017103"}}}


id: GO:0016267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form the core 1 O-glycan structure, Gal-beta-(1->3)-GalNAc. Core 1 occurs on most glycoproteins, and is often substituted with sialic acid residues or with various other sugars.","definition_xrefs":["PMID:10580130","GOC:pr","PMID:33775405","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycan processing","termid":"GO:0016266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"core 1 O-glycan biosynthetic process","synonyms":[{"name":"O-glycan processing, core 1","type":"exact"},{"name":"core 1 O-glycan biosynthesis","type":"exact"},{"name":"mucin type O-glycosylation","type":"related"}],"termid":"GO:0016267"}


id: MONDO:1011345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Poisoning that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poisoning, non-human animal","termid":"MONDO:1011345","xrefs":{"Monarch":{"xref_id":"1011345"}}}


id: MONDO:0009217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by pancytopenia, immune deficiency and cutaneous malignancies.","definition_xrefs":["DOID:0090066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fanconi-like syndrome","secondary_identifiers":["MESH:C536855","OMIM:227850","MEDGEN:56237","UMLS:C0151638","SCTID:236469003"],"synonyms":[{"name":"Fanconi-like syndrome","type":"exact"}],"termid":"MONDO:0009217","xrefs":{"Monarch":{"xref_id":"0009217"}}}


id: PBO:0075000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-11","termid":"PBO:0075000"}


id: GO:0051281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the release into the cytosolic compartment of calcium ions sequestered in the endoplasmic reticulum or mitochondria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051279"},{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transport","termid":"GO:1904427"},{"relation_name":"positively_regulates","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of release of sequestered calcium ion into cytosol","synonyms":[{"name":"activation of release of sequestered calcium ion into cytosol","type":"narrow"},{"name":"positive regulation of calcium ion (Ca2+) mobilization","type":"broad"},{"name":"positive regulation of calcium mobilization","type":"broad"},{"name":"positive regulation of cytoplasmic release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"positive regulation of cytoplasmic release of stored calcium ion (Ca2+)","type":"broad"},{"name":"positive regulation of cytosolic release of sequestered calcium ion (Ca2+)","type":"exact"},{"name":"positive regulation of cytosolic release of stored calcium ion (Ca2+)","type":"exact"},{"name":"positive regulation of release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"positive regulation of release of sequestered calcium ion into cytoplasm","type":"broad"},{"name":"positive regulation of release of stored calcium ion (Ca2+)","type":"broad"},{"name":"positive regulation of release of stored calcium ion (Ca2+) into cytoplasm","type":"broad"},{"name":"positive regulation of release of stored calcium ion (Ca2+) into cytosol","type":"exact"},{"name":"stimulation of release of sequestered calcium ion into cytosol","type":"narrow"},{"name":"up regulation of release of sequestered calcium ion into cytosol","type":"exact"},{"name":"up-regulation of release of sequestered calcium ion into cytosol","type":"exact"},{"name":"upregulation of release of sequestered calcium ion into cytosol","type":"exact"}],"termid":"GO:0051281"}


id: PBO:0053278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor B4","termid":"PBO:0053278"}


id: PBO:0116635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase activating protein 1","termid":"PBO:0116635"}


id: FYPO:0004771
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glycine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"},{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased vacuolar glycine level","synonyms":[{"name":"increased level of glycine in vacuole","type":"exact"},{"name":"increased vacuolar glycine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar glycine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004771"}


id: MONDO:0043343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Interposition of a portion of the colon (e.g., sigmoid colon) between the liver and the diaphragm. It is associated with abdominal pain, vomiting, constipation, anorexia and volvulus. Chilaiditi anomaly refers to asymptomatic interposition.","definition_xrefs":["MESH:D059269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colonic disorder","termid":"MONDO:0003409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Chilaiditi syndrome","secondary_identifiers":["SCTID:14911005","UMLS:C0267494","MEDGEN:452355"],"synonyms":[{"name":"Chilaiditi anomaly","type":"related"},{"name":"Chilaiditi's anomaly","type":"related"},{"name":"Chilaiditi's syndrome","type":"related"},{"name":"Chilaiditis anomaly","type":"related"},{"name":"Chilaiditis syndrome","type":"related"},{"name":"anomaly, Chilaiditi","type":"related"},{"name":"anomaly, Chilaiditi's","type":"related"},{"name":"chilaiditi's syndrome","type":"related"},{"name":"hepatodiaphragmatic colonic interposition","type":"related"},{"name":"subphrenic interposition syndrome","type":"exact"},{"name":"syndrome, Chilaiditi","type":"related"},{"name":"syndrome, Chilaiditi's","type":"related"}],"termid":"MONDO:0043343","xrefs":{"Monarch":{"xref_id":"0043343"}}}


id: GO:0043819
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + H2O + precorrin-5 = S-adenosyl-L-homocysteine + acetate + 2 H+ + precorrin-6X.","definition_xrefs":["RHEA:18261","EC:2.1.1.152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"precorrin-6A synthase (deacetylating) activity","secondary_identifiers":["KEGG_REACTION:R05219","MetaCyc:R322-RXN"],"synonyms":[{"name":"CobF","type":"related"},{"name":"S-adenosyl-L-methionine:precorrin-5 C1-methyltransferase (deacetylating)","type":"exact"},{"name":"precorrin-6X synthase (deacetylating) activity","type":"related"}],"termid":"GO:0043819"}


id: GO:1990798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of a destroyed pancreas.","definition_xrefs":["PMID:1985964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ regeneration","termid":"GO:0031100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreas regeneration","termid":"GO:1990798"}


id: GO:0097591
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Fibrillar repetitive structure surrounding the ventral disc edge in Giardia species (trophozoite stage). The composition of the lateral crest is not fully known yet.","definition_xrefs":["GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ventral disc","termid":"GO:0097597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ventral disc lateral crest","synonyms":[{"name":"lateral crest","type":"broad"},{"name":"ventral disk lateral crest","type":"related"}],"termid":"GO:0097591"}


id: GO:1903175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fatty alcohol.","definition_xrefs":["PMID:24036493","GOC:TermGenie","GO_REF:0000068","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"},{"relation_name":"is_a","term_name":"fatty alcohol metabolic process","termid":"GO:1903173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"fatty alcohol biosynthetic process","synonyms":[{"name":"fatty alcohol anabolism","type":"exact"},{"name":"fatty alcohol biosynthesis","type":"exact"},{"name":"fatty alcohol formation","type":"exact"},{"name":"fatty alcohol synthesis","type":"exact"}],"termid":"GO:1903175"}


id: SO:0000053
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_variant_effect which changes the regulatory region of a gene.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000053 sequence_variant_affecting_regulatory_region (obsolete SO:0000053)","synonyms":[{"name":"mutation affecting regulatory region","type":"related"},{"name":"sequence variant affecting regulatory region","type":"exact"}],"termid":"SO:0000053"}


id: PBO:0060429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleic acid binding protein 2","termid":"PBO:0060429"}


id: PBO:0069668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 945, pseudogene","termid":"PBO:0069668"}


id: PBO:0076275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex central element protein 3","termid":"PBO:0076275"}


id: GO:0100008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any prostaglandin biosynthetic process process that regulates fever generation.","definition_xrefs":["GOC:cjm","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin biosynthetic process","termid":"GO:0001516"},{"relation_name":"regulates","term_name":"fever generation","termid":"GO:0001660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of fever generation by prostaglandin biosynthetic process","termid":"GO:0100008"}


id: PR:O13940
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A low specificity L-threonine aldolase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low-specificity L-threonine aldolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.09c","secondary_identifiers":["UniProtKB:O13940"],"synonyms":[{"name":"Spom972h-ltaE","type":"exact"}],"termid":"PR:O13940"}


id: PBO:0069371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 631, pseudogene","termid":"PBO:0069371"}


id: MONDO:0009179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe generalized recessive dystrophic epidermolysis bullosa (RDEB-sev gen) is the most severe subtype of dystrophic epidermolysis bullosa (DEB), formerly known as the Hallopeau-Siemens type, and is characterized by generalized cutaneous and mucosal blistering and scarring associated with severe deformities and major extracutaneous involvement.","definition_xrefs":["Orphanet:79408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa dystrophica","termid":"MONDO:0006543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"recessive dystrophic epidermolysis bullosa","secondary_identifiers":["NANDO:1200238","UMLS:C0079474","NANDO:2201383","SCTID:48528004","MEDGEN:36311","DOID:0060642","OMIM:226600","GARD:6308","ICD9:757.39"],"synonyms":[{"name":"EBD inversa","type":"exact"},{"name":"RDEB","type":"related"},{"name":"RDEB generalisata gravis","type":"exact"},{"name":"RDEB, Hallopeau-Siemens type","type":"exact"},{"name":"RDEB, severe generalised","type":"related"},{"name":"RDEB, severe generalized","type":"related"},{"name":"RDEB-sev gen","type":"exact"},{"name":"autosomal recessive dystrophic epidermolysis bullosa generalisata gravis","type":"exact"},{"name":"autosomal recessive dystrophic epidermolysis bullosa, Hallopeau-Siemens type","type":"exact"},{"name":"autosomal recessive dystrophic epidermolysis bullosa, Hallopeau-Siemens type (formerly)","type":"related"},{"name":"dystrophic epidermolysis bullosa, autosomal recessive","type":"related"},{"name":"epidermolysis bullosa dystrophica inversa, autosomal recessive","type":"related"},{"name":"epidermolysis bullosa dystrophica, AR","type":"exact"},{"name":"epidermolysis bullosa dystrophica, Hallopeau-Siemens type","type":"related"},{"name":"epidermolysis bullosa dystrophica, autosomal recessive","type":"related"},{"name":"epidermolysis bullosa dystrophica, autosomal recessive, Localisata variant","type":"related"},{"name":"epidermolysis bullosa dystrophica, autosomal recessive, modifier of","type":"exact"},{"name":"epidermolysis bullosa dystrophica, generalised severe, autosomal recessive","type":"related"},{"name":"epidermolysis bullosa dystrophica, generalized severe, autosomal recessive","type":"related"},{"name":"recessive dystrophic epidermolysis bullosa, severe generalised","type":"related"},{"name":"recessive dystrophic epidermolysis bullosa, severe generalized","type":"related"},{"name":"severe generalised RDEB","type":"narrow"},{"name":"severe generalised recessive dystrophic epidermolysis bullosa","type":"narrow"},{"name":"severe generalized RDEB","type":"narrow"},{"name":"severe generalized recessive dystrophic epidermolysis bullosa","type":"narrow"}],"termid":"MONDO:0009179","xrefs":{"Monarch":{"xref_id":"0009179"}}}


id: PBO:0065525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patched 2","termid":"PBO:0065525"}


id: GO:0015900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of benomyl into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Benomyl, methyl 1-(butylcarbamoyl)-2-benzimidazolecarbamate, is a systemic agricultural fungicide used for control of certain fungal diseases of stone fruit.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete benomyl transport (obsolete GO:0015900)","termid":"GO:0015900"}


id: GO:0031829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 4 serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 4 serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 4 receptor binding","type":"exact"},{"name":"type 4 serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031829"}


id: PBO:0045808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EED pseudogene 1","termid":"PBO:0045808"}


id: GO:0010931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involving any mechanism for tolerance induction in macrophages.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage tolerance induction","termid":"GO:0010931"}


id: MONDO:0006796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Encephalopathy resulting from hypertension.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"encephalomyelitis","termid":"MONDO:0005156"},{"relation_name":"is_a","term_name":"intracranial hypertension","termid":"MONDO:0006810"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertensive encephalopathy","secondary_identifiers":["MedDRA:10020803","UMLS:C0151620","DOID:9427","ICD9:437.2","ICD10CM:I67.4","MESH:D020343","NCIT:C3503","EFO:1000976","MEDGEN:57726","SCTID:50490005","icd11.foundation:1934215896"],"termid":"MONDO:0006796","xrefs":{"Monarch":{"xref_id":"0006796"}}}


id: MONDO:0014069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndactyly-camptodactyly and clinodactyly of fifth fingers-bifid toes syndrome","secondary_identifiers":["UMLS:C3554611","MEDGEN:767525","GARD:17551","OMIM:615170","Orphanet:357332"],"synonyms":[{"name":"Synactyly-camptodactyly and clinodactyly of fifth fingers-bifid halluces syndrome","type":"exact"},{"name":"WAHAB syndrome","type":"related"},{"name":"Wahab syndrome","type":"exact"},{"name":"camptodactyly, clinodactyly, syndactyly, and bifid toe syndrome","type":"related"}],"termid":"MONDO:0014069","xrefs":{"Monarch":{"xref_id":"0014069"}}}


id: PR:Q10320
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transmembrane protein 165 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00979","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDT1-like protein C17G8.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.08c","secondary_identifiers":["UniProtKB:Q10320"],"synonyms":[{"name":"Spom972h-TMEM165","type":"exact"}],"termid":"PR:Q10320"}


id: PBO:0078360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (TTC) 5-1","termid":"PBO:0078360"}


id: FYPO:0000541
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein transport is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein transport during vegetative growth","termid":"FYPO:0000540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein transport during vegetative growth","synonyms":[{"name":"decreased protein transport during mitotic cell cycle","type":"related"},{"name":"protein transport: decreased","type":"related"},{"name":"reduced protein transport during vegetative growth","type":"exact"}],"termid":"FYPO:0000541"}


id: PBO:0082955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein containing a zinc finger domain; sequence similarity to that of Type I J-proteins; computational analysis of large-scale protein-protein interaction data suggests a possible role in actin patch assembly","termid":"PBO:0082955"}


id: GO:0103085
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxo-7-methylthioheptanoate + acetyl-CoA + H2O = H+ + 2-(5'-methylthio)pentylmalate + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-(5'-methylthio)pentylmalate synthase activity (obsolete GO:0103085)","termid":"GO:0103085"}


id: PBO:0016532
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YHR072W","termid":"PBO:0016532"}


id: PBO:0090762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Vps15","termid":"PBO:0090762"}


id: PBO:0054037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1372","termid":"PBO:0054037"}


id: MONDO:0009704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The myopathic form of carnitine palmitoyltransferase II (CPT II) deficiency, an inherited metabolic disorder that affects mitochondrial oxidation of long chain fatty acids (LCFA), is the most common and the least severe form of CPT II deficiency.","definition_xrefs":["Orphanet:228302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carnitine palmitoyltransferase II deficiency","termid":"MONDO:0015515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"carnitine palmitoyl transferase II deficiency, myopathic form","secondary_identifiers":["UMLS:C1833508","MESH:C563461","MEDGEN:371584","OMIM:255110","GARD:17149"],"synonyms":[{"name":"CARNITINE PALMITOYLTRANSFERASE II deficiency, late-onset","type":"related"},{"name":"CARNITINE PALMITOYLTRANSFERASE II deficiency, myopathic, stress-induced","type":"related"},{"name":"CPT 2 deficiency, myopathic","type":"related"},{"name":"CPT II deficiency, myopathic, stress-induced","type":"exact"},{"name":"CPT2, adult-onset form","type":"exact"},{"name":"CPT2, myopathic form","type":"exact"},{"name":"CPTII, adult-onset form","type":"exact"},{"name":"CPTII, myopathic form","type":"exact"},{"name":"Carnitine Palmitoyltransferase 2 deficiency, adult-onset","type":"related"},{"name":"Carnitine Palmitoyltransferase 2 deficiency, myopathic","type":"related"},{"name":"Carnitine Palmitoyltransferase 2 deficiency, myopathic, stress-induced","type":"related"},{"name":"Carnitine palmitoyl transferase II deficiency, adult-onset form","type":"exact"},{"name":"Carnitine palmitoyl transferase deficiency type 2, adult-onset form","type":"exact"},{"name":"Carnitine palmitoyl transferase deficiency type 2, myopathic form","type":"exact"},{"name":"Cpt2 deficiency, late-onset","type":"related"},{"name":"carnitine palmitoyl transferase II deficiency, myopathic form","type":"exact"}],"termid":"MONDO:0009704","xrefs":{"Monarch":{"xref_id":"0009704"}}}


id: PBO:0044309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 reductase 4","termid":"PBO:0044309"}


id: GO:0047665
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-aminolevulinate + pyruvate = 4,5-dioxopentanoate + L-alanine.","definition_xrefs":["RHEA:12480","EC:2.6.1.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003824","GO:0016769","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"aminolevulinate transaminase activity","secondary_identifiers":["KEGG_REACTION:R02271","MetaCyc:AMINOLEVULINATE-AMINOTRANSFERASE-RXN"],"synonyms":[{"name":"4,5-dioxovalerate aminotransferase activity","type":"related"},{"name":"4,5-dioxovaleric acid aminotransferase activity","type":"related"},{"name":"4,5-dioxovaleric acid transaminase activity","type":"related"},{"name":"4,5-dioxovaleric transaminase activity","type":"related"},{"name":"5-aminolevulinate:pyruvate aminotransferase activity","type":"related"},{"name":"5-aminolevulinic acid transaminase activity","type":"related"},{"name":"DOVA transaminase activity","type":"related"},{"name":"L-alanine-4,5-dioxovalerate aminotransferase activity","type":"related"},{"name":"L-alanine:4,5-dioxovaleric acid transaminase activity","type":"related"},{"name":"L-alanine:dioxovalerate transaminase activity","type":"related"},{"name":"alanine-dioxovalerate aminotransferase activity","type":"related"},{"name":"alanine-gamma,delta-dioxovalerate aminotransferase activity","type":"related"},{"name":"alanine:4,5-dioxovalerate aminotransferase activity","type":"related"},{"name":"aminolevulinate aminotransferase activity","type":"exact"},{"name":"aminolevulinic acid transaminase activity","type":"related"},{"name":"dioxovalerate transaminase activity","type":"related"},{"name":"gamma,delta-dioxovalerate aminotransferase activity","type":"related"},{"name":"gamma,delta-dioxovaleric acid transaminase activity","type":"related"}],"termid":"GO:0047665"}


id: PBO:0056715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"menin 1","termid":"PBO:0056715"}


id: PBO:0045545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUS4L-BCAP29 readthrough","termid":"PBO:0045545"}


id: PBO:0000050
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally repressed by Chp1","termid":"PBO:0000050"}


id: GO:0035335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of phosphoric residues from peptidyl-O-phospho-tyrosine to form peptidyl-tyrosine.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dephosphorylation","termid":"GO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine dephosphorylation","termid":"GO:0035335"}


id: PBO:0039829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine-fifty homeobox","termid":"PBO:0039829"}


id: GO:0030018
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached.","definition_xrefs":["ISBN:0815316194","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"I band","termid":"GO:0031674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Z disc","synonyms":[{"name":"Z band","type":"exact"},{"name":"Z disk","type":"exact"},{"name":"Z line","type":"exact"}],"termid":"GO:0030018"}


id: PBO:0001968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pericentrin Pcp1","termid":"PBO:0001968"}


id: MONDO:0004881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of myositis that is characterized by the formation of connective tissue within the muscle.","definition_xrefs":["NCIT:C26985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myositis disease","termid":"MONDO:0021167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myositis fibrosa","secondary_identifiers":["ICD9:728.81","MEDGEN:57855","SCTID:55925001","ICD10CM:M60.1","DOID:9788","UMLS:C0158362"],"synonyms":[{"name":"interstitial myositis","type":"exact"}],"termid":"MONDO:0004881","xrefs":{"Monarch":{"xref_id":"0004881"}}}


id: PBO:0088095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Unconventional prefoldin protein involved in translation initiation; required for correct assembly of RNAP I, II, and III in an Rpb5p-dependent manner; shuttles between nucleus and cytoplasm; mutants have inappropriate expression of nutrient sensitive genes due to translational derepression of Gcn4p transcription factor; diploid mutants show random budding; ortholog of human URI/RMP","termid":"PBO:0088095"}


id: PBO:0030973
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation","termid":"PBO:0030973"}


id: GO:0102065
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = diphosphoric acid + gamma-patchoulene.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete patchoulene synthase activity (obsolete GO:0102065)","termid":"GO:0102065"}


id: FYPO:0006062
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which one septin ring assembles in the normal location, but one or more additional septin rings also form in abnormal locations.","definition_xrefs":["PMID:15385632","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septin ring assembly during vegetative growth","termid":"FYPO:0006061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"ectopic septin ring assembly during vegetative growth","synonyms":[{"name":"ectopic septin ring assembly during mitotic cell cycle","type":"related"},{"name":"ectopic septin ring formation during vegetative growth","type":"exact"}],"termid":"FYPO:0006062"}


id: PBO:0042937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroadherin","termid":"PBO:0042937"}


id: MONDO:1010923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Muscular dystrophy, Duchenne type that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, Duchenne type, non-human animal","termid":"MONDO:1010199"},{"relation_name":"is_a","term_name":"muscular dystrophy, dog","termid":"MONDO:1010911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, Duchenne type, dog","secondary_identifiers":["OMIA:001081-9615"],"termid":"MONDO:1010923","xrefs":{"Monarch":{"xref_id":"1010923"}}}


id: PBO:0073077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal cell derived factor 2","termid":"PBO:0073077"}


id: GO:2000345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hepatocyte proliferation.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"hepatocyte proliferation","termid":"GO:0072574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hepatocyte proliferation","termid":"GO:2000345"}


id: MONDO:1011624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Xanthinuria that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthinuria, non-human animal","termid":"MONDO:1011450"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xanthinuria, domestic cat","secondary_identifiers":["OMIA:001283-9685"],"termid":"MONDO:1011624","xrefs":{"Monarch":{"xref_id":"1011624"}}}


id: GO:0046128
data:
  {"annotated_genes":["SJAG_02582","SJAG_00134","SJAG_06634","SJAG_03881","SJAG_01070","SJAG_03096","SJAG_01859","SJAG_00044","SJAG_02959","SJAG_02580"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[89443,89442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[92418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046085"},{"annotations":[118845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[71666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[62512,75199,95641,67880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any ribonucleoside, a nucleoside in which purine base is linked to a ribose (beta-D-ribofuranose) molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside metabolic process","termid":"GO:0009119"},{"relation_name":"is_a","term_name":"purine nucleoside metabolic process","termid":"GO:0042278"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_01070":null,"SJAG_01859":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02959":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine ribonucleoside metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine ribonucleoside metabolism","type":"exact"}],"termid":"GO:0046128","terms_by_termid":{"GO:0006154":null,"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0046085":null,"GO:0046086":null}}


id: PBO:0083922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Formylkynurenine formamidase; involved in the de novo biosynthesis of NAD from tryptophan via kynurenine","termid":"PBO:0083922"}


id: PBO:0000488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi localized Arf binding gamma-adaptin ortholog (predicted)","termid":"PBO:0000488"}


id: PBO:0065968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51 paralog B","termid":"PBO:0065968"}


id: PBO:0080874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YOD1 deubiquitinase","termid":"PBO:0080874"}


id: MONDO:0017346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epstein-Barr virus-positive diffuse large B-cell lymphoma of the elderly is a rare form of diffuse large B-cell lymphoma occurring most commonly in patients over the age of 50 (usually between 70-75 years of age), without overt immunodeficiency, and presenting with nodal and extranodal involvement (in sites such as the stomach, lung, skin and pancreas) and B symptoms (fever, night sweats, weight loss). The tumor is characterized by an aggressive course and a short survival rate.","definition_xrefs":["Orphanet:289661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Epstein-Barr virus-associated malignant lymphoproliferative disorder","termid":"MONDO:0017343"},{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"Epstein-Barr virus-positive diffuse large B-cell lymphoma of the elderly","secondary_identifiers":["MEDGEN:397690","SCTID:716788007","UMLS:C2700007","icd11.foundation:407807101","GARD:21150","NCIT:C80281","ICDO:9680/3"],"synonyms":[{"name":"EBV Positive diffuse large B-cell lymphoma of the elderly","type":"exact"},{"name":"EBV-Positive diffuse large B-cell lymphoma, NOS","type":"exact"},{"name":"EBV-positive DLBCL of the elderly","type":"exact"},{"name":"Epstein-Barr Virus Positive diffuse large B-cell lymphoma of the elderly","type":"exact"},{"name":"Senile EBV-associated B-cell lymphoproliferative disorder","type":"exact"},{"name":"age-related EBV Positive B-cell lymphoproliferative disorder","type":"exact"}],"termid":"MONDO:0017346","xrefs":{"Monarch":{"xref_id":"0017346"}}}


id: MONDO:1010116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The sudden unexpected death of an apparently healthy infant under one year of age that remains unexplained after a thorough case investigation, including performance of a complete autopsy with ancillary testing, examination of the death scene, and review of the clinical history.","definition_xrefs":["PMID:31502215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sudden unexpected death in pediatrics","termid":"MONDO:1010120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sudden unexpected infant death","synonyms":[{"name":"accidental suffocation and strangulation in bed","type":"exact"},{"name":"sudden infant death syndrome","type":"exact"},{"name":"undetermined cause of death","type":"exact"}],"termid":"MONDO:1010116","xrefs":{"Monarch":{"xref_id":"1010116"}}}


id: PBO:0050696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 9 pseudogene 2","termid":"PBO:0050696"}


id: PBO:0088926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN complex subunit Gem7","termid":"PBO:0088926"}


id: GO:0061448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a connective tissue over time, from its formation to the mature structure.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"connective tissue development","termid":"GO:0061448"}


id: GO:0030460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear translocation of MAPK (mating sensu Fungi) (obsolete GO:0030460)","synonyms":[{"name":"nuclear translocation of MAPK (mating sensu Fungi)","type":"exact"}],"termid":"GO:0030460"}


id: GO:0019562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of L-phenylalanine into other compounds, including phosphoenolpyruvate.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete L-phenylalanine catabolic process to phosphoenolpyruvate (obsolete GO:0019562)","synonyms":[{"name":"phenylalanine breakdown to phosphoenolpyruvate","type":"exact"},{"name":"phenylalanine degradation to phosphoenolpyruvate","type":"exact"}],"termid":"GO:0019562"}


id: MONDO:0019633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Relapsing fever is an infection caused by bacteria of the genus Borrelia, excluding those responsible for Lyme disease belonging to the Borrelia burgdorferi complex.","definition_xrefs":["Orphanet:91547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"Borrelia infectious disease","termid":"MONDO:0006681"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relapsing fever","secondary_identifiers":["ICD9:087.9","DOID:13034","UMLS:C0035021","MESH:D012061","MedDRA:10038300","MEDGEN:48397","ICD10CM:A68","SCTID:420079008","ICD9:087","GARD:19171","icd11.foundation:965498095"],"termid":"MONDO:0019633","xrefs":{"Monarch":{"xref_id":"0019633"}}}


id: MONDO:0957255
data:
  {"annotated_genes":["SJAG_00133"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88382],"is_not":false,"summary":null,"term":"MONDO:0957255"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial proton-transporting ATP synthase complex deficiency","termid":"MONDO:0014471"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00133":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex V (ATP synthase) deficiency, nuclear type 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620359","UMLS:C5830482","DOID:0070464","MEDGEN:1841118"],"termid":"MONDO:0957255","terms_by_termid":{"MONDO:0957255":null},"xrefs":{"Monarch":{"xref_id":"0957255"}}}


id: PBO:0078103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 11","termid":"PBO:0078103"}


id: PATO:0002631
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An occurrence of a process during which time there is an inability to change the course, extent, or repetition of the process.","definition_xrefs":["PATO:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"refractory","termid":"PATO:0002631"}


id: FYPO:0007936
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the number of sites of  DNA breakpoint junctions is greater than normal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased DNA damage","termid":"FYPO:0003546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased number of DNA breakpoint junctions","termid":"FYPO:0007936"}


id: MONDO:0023089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clinical term that refers to the presence of a red flat and well defined lesion on the oral mucosa that is not caused by trauma, vascular, or inflammatory processes. It is a precancerous condition and is seen more commonly in middle aged or older males. It is associated with tobacco and alcohol consumption. Microscopic examination reveals severe epithelial dysplasia, carcinoma in situ, or invasive squamous cell carcinoma.","definition_xrefs":["NCIT:C3025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythroplakia","secondary_identifiers":["MEDGEN:41862","UMLS:C0014818"],"synonyms":[{"name":"erythroplakia","type":"exact"}],"termid":"MONDO:0023089","xrefs":{"Monarch":{"xref_id":"0023089"}}}


id: PBO:0084566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane peroxin of the peroxisomal importomer complex; complex facilitates the import of peroxisomal matrix proteins; required for peroxisome biogenesis","termid":"PBO:0084566"}


id: GO:0015475
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of adhesin from the periplasm to the external milieu; the adhesin and the porin are the N- and C-terminal regions of the same protein, respectively.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete adhesin autotransporter activity (obsolete GO:0015475)","termid":"GO:0015475"}


id: MONDO:0004490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gestational uterine corpus choriocarcinoma (obsolete MONDO:0004490)","termid":"MONDO:0004490","xrefs":{"Monarch":{"xref_id":"0004490"}}}


id: MONDO:0003975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma involving a male urethral gland.","definition_xrefs":["MONDO:patterns/carcinoma"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"male reproductive organ cancer","termid":"MONDO:0005836"},{"relation_name":"is_a","term_name":"male urethral cancer","termid":"MONDO:0004197"},{"relation_name":"is_a","term_name":"carcinoma of urethra","termid":"MONDO:0021327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"Littre gland carcinoma","secondary_identifiers":["DOID:6721","NCIT:C39865","UMLS:C1516285","MEDGEN:273092"],"synonyms":[{"name":"carcinoma of LittrC) glands","type":"exact"},{"name":"carcinoma of Littre glands","type":"exact"},{"name":"carcinoma of Littré glands","type":"exact"},{"name":"carcinoma of male urethral gland","type":"exact"},{"name":"male urethral gland carcinoma","type":"exact"}],"termid":"MONDO:0003975","xrefs":{"Monarch":{"xref_id":"0003975"}}}


id: MOD:01191
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["Unimod:211#C","PubMed:12766232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-ethyl iodoacetamide-d0","termid":"MOD:00561"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ethyl iodoacetamide-d0 - site C","synonyms":[{"name":"N-ethyl iodoacetamide-d0","type":"related"},{"name":"NEIAA","type":"related"}],"termid":"MOD:01191"}


id: PBO:0036140
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_acetylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036140"}


id: GO:0042902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of linking a protein to peptidoglycan via a carboxy terminal threonine carboxyl group through a pentaglycyl peptide to the lysine or diaminopimelic acid of the peptidoglycan.","definition_xrefs":["RESID:AA0345"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidoglycan-protein cross-linking via L-threonyl-pentaglycyl-murein (obsolete GO:0042902)","termid":"GO:0042902"}


id: PBO:0029289
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delaminated_cell_wall_during_G0","termid":"PBO:0029289"}


id: PBO:0061425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ribosyldihydronicotinamide:quinone reductase 2","termid":"PBO:0061425"}


id: PR:Q10434
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An F-actin-capping protein subunit alpha-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-actin-capping protein subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.07","secondary_identifiers":["UniProtKB:Q10434"],"synonyms":[{"name":"SPAC12B10.07","type":"related"},{"name":"Spom972h-CAPZA2","type":"exact"}],"termid":"PR:Q10434"}


id: MONDO:0013974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pure hair and nail ectodermal dysplasia","termid":"MONDO:0019071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia 6, hair/nail type","secondary_identifiers":["MEDGEN:767025","OMIM:614928","GARD:18064","UMLS:C3554111","DOID:0111659"],"synonyms":[{"name":"ECTD6","type":"exact"},{"name":"ectodermal dysplasia 6, hair/nail type","type":"exact"}],"termid":"MONDO:0013974","xrefs":{"Monarch":{"xref_id":"0013974"}}}


id: GO:0021996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anterior-most portion of the neural axis is formed by closure of the anterior neuropore.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"anterior neuropore closure","termid":"GO:0021506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lamina terminalis formation","termid":"GO:0021996"}


id: PBO:0082724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RAM signaling network; is involved in regulation of Ace2p activity and cellular morphogenesis; interacts with Sog2p; allosterically activates Kic1p; localizes to sites of polarized growth during budding and during the mating response","termid":"PBO:0082724"}


id: PBO:0091871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase 2","termid":"PBO:0091871"}


id: GO:0032214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the semi-conservative replication of telomeric DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance","termid":"GO:0032205"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance via semi-conservative replication","termid":"GO:0032213"},{"relation_name":"negatively_regulates","term_name":"telomere maintenance via semi-conservative replication","termid":"GO:0032201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0008150","GO:0032200","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"negative regulation of telomere maintenance via semi-conservative replication","synonyms":[{"name":"down regulation of telomere maintenance via semi-conservative replication","type":"exact"},{"name":"down-regulation of telomere maintenance via semi-conservative replication","type":"exact"},{"name":"downregulation of telomere maintenance via semi-conservative replication","type":"exact"},{"name":"inhibition of telomere maintenance via semi-conservative replication","type":"narrow"}],"termid":"GO:0032214"}


id: FYPO:0001569
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-ornithine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular ornithine level","synonyms":[{"name":"increased cellular L-ornithine level","type":"exact"},{"name":"increased cellular ornithine level during mitotic cell cycle","type":"related"},{"name":"increased cellular ornithine level during vegetative growth","type":"exact"},{"name":"increased ornithine accumulation","type":"related"}],"termid":"FYPO:0001569"}


id: GO:0050736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a malonyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"},{"relation_name":"is_a","term_name":"malonyltransferase activity","termid":"GO:0016420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"O-malonyltransferase activity","termid":"GO:0050736"}


id: PBO:0076820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal nucleotidyltransferase 4A","termid":"PBO:0076820"}


id: PBO:0082043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase; involved in ubiquinone (Coenzyme Q) biosynthesis; localizes to the matrix face of the mitochondrial inner membrane in a large complex with other ubiquinone biosynthetic enzymes; respiratory defect of the null mutant is partially complemented by human COQ5","termid":"PBO:0082043"}


id: MONDO:0850418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse large B-cell lymphoma that is characterized by the expression of CD44, PKCbeta1, Cyclin D2, BCL-2, and IRF4/MUM1 genes.","definition_xrefs":["DOID:0080996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"diffuse large B-cell lymphoma activated B-cell type","secondary_identifiers":["NCIT:C36081","MEDGEN:272545","UMLS:C1333296"],"termid":"MONDO:0850418","xrefs":{"Monarch":{"xref_id":"0850418"}}}


id: GO:0022613
data:
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id: PBO:0085361
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id: SO:0001880
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant, caused by an alteration of the genomic sequence, where the structural change, an amplification of sequence, is greater than the extent of the underlying genomic features.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural_variant","termid":"SO:0001537"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_amplification","synonyms":[{"name":"feature amplification","type":"exact"}],"termid":"SO:0001880"}


id: FYPO:0006103
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id: GO:1901591
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id: GO:0051549
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of keratinocyte migration.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell migration","termid":"GO:0010634"},{"relation_name":"is_a","term_name":"regulation of keratinocyte migration","termid":"GO:0051547"},{"relation_name":"positively_regulates","term_name":"keratinocyte migration","termid":"GO:0051546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of keratinocyte migration","synonyms":[{"name":"activation of keratinocyte migration","type":"narrow"},{"name":"stimulation of keratinocyte migration","type":"narrow"},{"name":"up regulation of keratinocyte migration","type":"exact"},{"name":"up-regulation of keratinocyte migration","type":"exact"},{"name":"upregulation of keratinocyte migration","type":"exact"}],"termid":"GO:0051549"}


id: PBO:0000199
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  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as dubious","termid":"PBO:0000199"}


id: PBO:0004377
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylamine-glycine ligase","termid":"PBO:0004377"}


id: GO:1904038
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id: MONDO:0017877
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brazilian hemorrhagic fever, caused by the Sabia virus (a newly discovered arenavirus), is a viral hemorrhagic fever, believed to originate from Sao Paulo, Brazil, with only 3 reported cases (2 of which were due to laboratory accidents) to date, characterized by fever, nausea vomiting myalgia tremors, and hemorragic manifestations such as conjunctival petechia and haematemesis, leading potentially to shock, coma and death.","definition_xrefs":["Orphanet:319239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral hemorrhagic fever","termid":"MONDO:0018087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brazilian hemorrhagic fever","secondary_identifiers":["SCTID:240524001","UMLS:C0343633","DOID:0050197","GARD:21414","MEDGEN:575736"],"synonyms":[{"name":"Sabia hemorrhagic fever","type":"exact"}],"termid":"MONDO:0017877","xrefs":{"Monarch":{"xref_id":"0017877"}}}


id: GO:0030856
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell differentiation","termid":"GO:0030856"}


id: PBO:0061309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrocystin 1","termid":"PBO:0061309"}


id: PBO:0027778
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_mitotic_spindle_elongation","termid":"PBO:0027778"}


id: GO:0047443
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id: MONDO:0020425
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery congenital malformation","termid":"MONDO:0015203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abnormal number of coronary ostia","secondary_identifiers":["Orphanet:99089","GARD:19644","MEDGEN:1676211","UMLS:C5191081"],"termid":"MONDO:0020425","xrefs":{"Monarch":{"xref_id":"0020425"}}}


id: PBO:0084610
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a protein; YGL210W-A was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YGL211W","termid":"PBO:0084610"}


id: GO:0044660
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dissemination of mature viral particles from a host cell via the formation by the virus of pores in its host cell membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral release from host cell by cytolysis","termid":"GO:0044659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral release via pore formation in host cell membrane","synonyms":[{"name":"cytolysis by virus via pore formation in host cell membrane","type":"related"},{"name":"viral exit by cytolysis via pore formation in host cell membrane","type":"exact"},{"name":"viral release by cytolysis via pore formation in host cell membrane","type":"exact"}],"termid":"GO:0044660"}


id: PBO:0057562
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id: GO:0044305
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id: PBO:0074896
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id: PBO:0031137
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id: GO:0106057
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id: PBO:0029454
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id: GO:0046870
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id: GO:0000280
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id: PBO:0068301
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id: PBO:0026764
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id: GO:0004030
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id: PBO:0041047
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id: PBO:0041767
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id: PBO:0002114
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id: GO:0021932
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id: PBO:0064544
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id: GO:0090257
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id: MONDO:0859290
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id: PBO:0061996
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id: PBO:0067875
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id: PBO:0004101
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id: PBO:0064691
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id: GO:0060700
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id: PBO:0056064
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id: MONDO:0004666
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id: GO:0000960
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id: MONDO:0044965
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id: PBO:0030821
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id: PBO:0027875
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id: PBO:0017460
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id: GO:0000393
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id: PBO:0065319
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id: MONDO:0014199
data:
  {"annotated_genes":["SJAG_02233"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87660],"is_not":false,"summary":null,"term":"MONDO:0014199"}]},"cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the GNAO1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 17","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:13378","OMIM:615473","UMLS:C3809606","MEDGEN:815936","DOID:0080450"],"synonyms":[{"name":"DEE17","type":"exact"},{"name":"EIEE17","type":"exact"},{"name":"GNAO1 early infantile epileptic encephalopathy","type":"exact"},{"name":"GNAO1 encephalopathy","type":"related"},{"name":"developmental and epileptic encephalopathy 17","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in GNAO1","type":"exact"},{"name":"early infantile epileptic encephalopathy-17","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 17","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 17","type":"exact"}],"termid":"MONDO:0014199","terms_by_termid":{"MONDO:0014199":null},"xrefs":{"Monarch":{"xref_id":"0014199"}}}


id: PBO:0046114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 1 pseudogene 1","termid":"PBO:0046114"}


id: GO:1900445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to biotic stimulus.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"positive regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900430"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","termid":"GO:1900443"},{"relation_name":"positively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to biotic stimulus","termid":"GO:0036180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","synonyms":[{"name":"activation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"narrow"},{"name":"up regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"exact"},{"name":"up-regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"exact"},{"name":"upregulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"exact"}],"termid":"GO:1900445"}


id: PBO:0042521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK2AP1 pseudogene 1","termid":"PBO:0042521"}


id: FYPO:0000991
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004205"},{"annotations":[121344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of a specific substance measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype","termid":"FYPO:0000136"},{"relation_name":"is_a","term_name":"altered level of substance in cell","termid":"FYPO:0000989"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03689":null,"SJAG_04697":null},"genotype_count":2,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of substance in cell","references_by_uniquename":{"PMID:35226668":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_03689","SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta","dcr1delta"],"synonyms":[{"name":"reduced level of substance in cell","type":"exact"}],"termid":"FYPO:0000991","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0003727":null,"FYPO:0004205":null,"FYPO_EXT:0000001":null}}


id: GO:2000094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mesonephric nephron tubule epithelial cell differentiation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nephron tubule epithelial cell differentiation","termid":"GO:0072183"},{"relation_name":"is_a","term_name":"regulation of mesonephric nephron tubule epithelial cell differentiation","termid":"GO:2000093"},{"relation_name":"negatively_regulates","term_name":"mesonephric nephron tubule epithelial cell differentiation","termid":"GO:0061265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesonephric nephron tubule epithelial cell differentiation","termid":"GO:2000094"}


id: PBO:0039949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ariadne RBR E3 ubiquitin protein ligase 2","termid":"PBO:0039949"}


id: GO:0018925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving m-cresol (3-hydroxytoluene), the meta-isoform of cresol. Used to produce agricultural chemicals, and in specialty resins, pharmaceuticals and pressure-sensitive dyes.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cresol metabolic process","termid":"GO:0042212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"m-cresol metabolic process","secondary_identifiers":["UM-BBD_pathwayID:mcr"],"synonyms":[{"name":"3-hydroxytoluene metabolic process","type":"exact"},{"name":"3-hydroxytoluene metabolism","type":"exact"},{"name":"m-cresol metabolism","type":"exact"},{"name":"meta-cresol metabolic process","type":"exact"},{"name":"meta-cresol metabolism","type":"exact"}],"termid":"GO:0018925"}


id: GO:0045300
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + O2 + octadecanoyl-[ACP] + 2 reduced [2Fe-2S]-[ferredoxin] = (9Z)-octadecenoyl-[ACP] + 2 H2O + 2 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["RHEA:11776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"stearoyl-[ACP] desaturase activity","secondary_identifiers":["EC:1.14.19.2","KEGG_REACTION:R03370","MetaCyc:RXN-7903"],"synonyms":[{"name":"acyl-[acyl-carrier-protein] desaturase activity","type":"related"},{"name":"acyl-acyl-carrier-protein desaturase activity","type":"related"},{"name":"acyl-acyl-carrier-protein, hydrogen-donor:oxygen oxidoreductase activity","type":"related"},{"name":"stearyl acyl carrier protein desaturase activity","type":"related"},{"name":"stearyl-ACP desaturase activity","type":"related"}],"termid":"GO:0045300"}


id: MOD:01310
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a lysine N6-hydrogen with a quaternary amine reagent light form group.","definition_xrefs":["Unimod:60#K","PubMed:11857757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quaternary amine labeling reagent light form N6-L-lysine","synonyms":[{"name":"GIST-Quat","type":"related"},{"name":"Quaternary amine labeling reagent light form (N-term & K)","type":"related"}],"termid":"MOD:01310"}


id: PBO:0119272
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human REEP3","termid":"PBO:0119272"}


id: MONDO:0023569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"corpus callosum, agenesis of","termid":"MONDO:0009022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"Kozlowski Ouvrier syndrome","secondary_identifiers":["UMLS:C2931512","MEDGEN:444073","MESH:C537508"],"synonyms":[{"name":"agenesis of the corpus callosum with intellectual disability and osseous lesions","type":"related"},{"name":"agenesis of the corpus callosum with mental retardation and osseous lesions","type":"related"}],"termid":"MONDO:0023569","xrefs":{"Monarch":{"xref_id":"0023569"}}}


id: MONDO:8000010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder caused by the presence of autoantibodies directed against phospholipids, causing a hypercoaguable state, which may result in blood clots, stroke, heart attack, and in women, significant pregnancy-related complications, including miscarriage and still birth. The syndrome is often associated with other autoimmune disorders, most commonly lupus erythematosus, and infections, including syphilis and Lyme disease.","definition_xrefs":["NCIT:C61283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"antiphospholipid syndrome","secondary_identifiers":["EFO:0002689","icd11.foundation:1173370808","ICD9:279.49","Orphanet:80","UMLS:C0085278","SCTID:26843008","ICD10CM:D68.61","DOID:2988","GARD:5824","MEDGEN:38834","MESH:D016736"],"synonyms":[{"name":"Hughes syndrome","type":"exact"},{"name":"antiphospholipid antibody syndrome","type":"exact"},{"name":"antiphospholipid syndrome","type":"exact"},{"name":"familial lupus anticoagulant","type":"exact"},{"name":"lupus anticoagulant, familial","type":"related"}],"termid":"MONDO:8000010","xrefs":{"Monarch":{"xref_id":"8000010"}}}


id: PBO:0062744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily I member 1","termid":"PBO:0062744"}


id: MONDO:0006362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant mesothelial neoplasm that arises from the peritoneum.","definition_xrefs":["NCIT:C7633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesothelioma","termid":"MONDO:0005065"},{"relation_name":"is_a","term_name":"peritoneal neoplasm","termid":"MONDO:0006901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peritoneal mesothelioma","secondary_identifiers":["UMLS:C1377610","SCTID:109853004","ONCOTREE:PEMESO","HP:0100003","EFO:1000467","MEDGEN:237171"],"synonyms":[{"name":"mesothelioma of peritoneum","type":"exact"},{"name":"mesothelioma of the peritoneum","type":"exact"},{"name":"peritoneal mesothelioma","type":"exact"},{"name":"peritoneal mesothelioma (disease)","type":"exact"},{"name":"peritoneum mesothelioma","type":"exact"}],"termid":"MONDO:0006362","xrefs":{"Monarch":{"xref_id":"0006362"}}}


id: GO:0008567
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate. The hydrolysis of ATP by dynein that provides the energy for the movement of organelles (endosomes, lysosomes, mitochondria) along microtubules to the centrosome.","definition_xrefs":["EC:3.6.4.2"],"gene_count":0,"genotype_count":0,"name":"obsolete dynein ATPase activity (obsolete GO:0008567)","synonyms":[{"name":"dynein ATPase activity","type":"exact"}],"termid":"GO:0008567"}


id: RO:HOM0000060
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Between-species paralogy that involves single copy paralogs resulting from reciprocal gene loss.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_1_to_1_homology_relationship_with","termid":"RO:HOM0000019"},{"relation_name":"is_a","term_name":"in_between-species_paralogy_relationship_with","termid":"RO:HOM0000050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_apparent_orthology_relationship_with","synonyms":[{"name":"1:1 paralogy","type":"exact"},{"name":"apparent 1:1 orthology","type":"exact"},{"name":"apparent orthologous to","type":"exact"},{"name":"pseudoorthology","type":"exact"}],"termid":"RO:HOM0000060"}


id: GO:0071989
data:
  {"annotated_genes":["SJAG_01371","SJAG_02731","SJAG_00918","SJAG_05319","SJAG_05220","SJAG_05266","SJAG_03437","SJAG_01224","SJAG_01775","SJAG_01211","SJAG_01546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92855,111868,102447,116095,118925,98687,109465,91618,91011,110858,100539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to a specific location at the spindle pole body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to spindle pole body","termid":"GO:0071988"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01775":null,"SJAG_02731":null,"SJAG_03437":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of protein localization to spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of protein localisation to spindle pole body","type":"exact"}],"termid":"GO:0071989","terms_by_termid":{"GO:1990976":null}}


id: PBO:0060984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neugrin, neurite outgrowth associated","termid":"PBO:0060984"}


id: PBO:0078636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone receptor interactor 10","termid":"PBO:0078636"}


id: PBO:0077978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon TGC) 1-1","termid":"PBO:0077978"}


id: GO:0061376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the mammillotegmental tract progresses over time, from its formation to the mature structure. The mammillotegmental tract is the collection of axons that connects the ventral diencephalon to the tegmentum and pons.","definition_xrefs":["GOC:dph","PMID:10662642","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"mammillary axonal complex development","termid":"GO:0061373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammillotegmental axonal tract development","termid":"GO:0061376"}


id: GO:0070662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a mast cell population by cell division.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte proliferation","termid":"GO:0070661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mast cell proliferation","termid":"GO:0070662"}


id: GO:0055020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of cardiac muscle fiber development.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle fiber development","termid":"GO:0055018"},{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle cell differentiation","termid":"GO:2000727"},{"relation_name":"positively_regulates","term_name":"cardiac muscle cell development","termid":"GO:0055013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle fiber development","synonyms":[{"name":"activation of cardiac muscle fiber development","type":"narrow"},{"name":"positive regulation of cardiac muscle fibre development","type":"exact"},{"name":"positive regulation of heart muscle fiber development","type":"exact"},{"name":"stimulation of cardiac muscle fiber development","type":"narrow"},{"name":"up regulation of cardiac muscle fiber development","type":"exact"},{"name":"up-regulation of cardiac muscle fiber development","type":"exact"},{"name":"upregulation of cardiac muscle fiber development","type":"exact"}],"termid":"GO:0055020"}


id: GO:0031972
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of a chloroplast envelope.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid intermembrane space","termid":"GO:0009529"},{"relation_name":"part_of","term_name":"chloroplast envelope","termid":"GO:0009941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chloroplast intermembrane space","synonyms":[{"name":"chloroplast envelope lumen","type":"exact"}],"termid":"GO:0031972"}


id: MONDO:0015846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A uterovaginal malformation that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic uterovaginal malformation (obsolete MONDO:0015846)","secondary_identifiers":["Orphanet:180148"],"synonyms":[{"name":"syndrome associated with uterovaginal malformation","type":"exact"},{"name":"syndromic uterovaginal malformation","type":"exact"}],"termid":"MONDO:0015846","xrefs":{"Monarch":{"xref_id":"0015846"}}}


id: PBO:0059956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 1","termid":"PBO:0059956"}


id: PBO:0027023
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_punctate_nuclear_protein_localization,_with_protein_distributed_in_nucleus","termid":"PBO:0027023"}


id: MONDO:0019968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Osgood-Schlatter disease (obsolete MONDO:0019968)","termid":"MONDO:0019968","xrefs":{"Monarch":{"xref_id":"0019968"}}}


id: GO:0016254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The stepwise addition of the components of the GPI anchor on to phosphatidylinositol lipids in the endoplasmic reticulum membrane.","definition_xrefs":["ISBN:0879695595"],"gene_count":0,"genotype_count":0,"name":"obsolete preassembly of GPI anchor in ER membrane (obsolete GO:0016254)","synonyms":[{"name":"preassembly of GPI anchor in endoplasmic reticulum membrane","type":"exact"}],"termid":"GO:0016254"}


id: MONDO:0004372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic polyneuropathy","termid":"MONDO:0003335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"chronic toxic polyneuropathy","secondary_identifiers":["MEDGEN:234149","UMLS:C1333048","NCIT:C35603","DOID:7825"],"synonyms":[{"name":"chronic toxic polyneuropathy","type":"exact"}],"termid":"MONDO:0004372","xrefs":{"Monarch":{"xref_id":"0004372"}}}


id: GO:0002020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protease or a peptidase.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"protease binding","secondary_identifiers":["Reactome:R-HSA-1297354"],"termid":"GO:0002020"}


id: PBO:0047502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FER tyrosine kinase","termid":"PBO:0047502"}


id: GO:2001204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of osteoclast development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hemopoiesis","termid":"GO:1903706"},{"relation_name":"regulates","term_name":"osteoclast development","termid":"GO:0036035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of osteoclast development","synonyms":[{"name":"regulation of osteoclast cell development","type":"exact"}],"termid":"GO:2001204"}


id: PR:O94602
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.15c gene.","definition_xrefs":["UniProtKB:O94602","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C622.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.15c","synonyms":[{"name":"Spom972h-SPCC622.15c","type":"exact"}],"termid":"PR:O94602"}


id: MONDO:0001055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"conjunctival degeneration","termid":"MONDO:0000949"},{"relation_name":"is_a","term_name":"pterygium","termid":"MONDO:0005085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"conjunctival pterygium","secondary_identifiers":["UMLS:C4520843","DOID:10526","MEDGEN:1625284"],"synonyms":[{"name":"web eye","type":"exact"}],"termid":"MONDO:0001055","xrefs":{"Monarch":{"xref_id":"0001055"}}}


id: MONDO:0025489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoid neoplastic disease in cattle caused by the bovine leukemia virus. Enzootic bovine leukosis may take the form of lymphosarcoma, malignant lymphoma, or leukemia but the presence of malignant cells in the blood is not a consistent finding.","definition_xrefs":["MESH:D016583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bovine leukemia","termid":"MONDO:0700135"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enzootic bovine leukosis","synonyms":[{"name":"bovine Leukoses","type":"related"},{"name":"bovine Leukoses, enzootic","type":"related"},{"name":"bovine Lymphomas","type":"related"},{"name":"bovine Lymphosarcomas","type":"related"},{"name":"bovine leukaemia","type":"related"},{"name":"bovine leukemia","type":"related"},{"name":"bovine leukemias","type":"related"},{"name":"bovine leukosis","type":"related"},{"name":"bovine leukosis, enzootic","type":"related"},{"name":"bovine lymphoma","type":"related"},{"name":"bovine lymphosarcoma","type":"related"},{"name":"enzootic bovine Leukoses","type":"related"},{"name":"leukemia, bovine","type":"related"},{"name":"leukemias, bovine","type":"related"},{"name":"leukoses, bovine","type":"related"},{"name":"leukoses, enzootic bovine","type":"related"},{"name":"leukosis, bovine","type":"related"},{"name":"leukosis, enzootic bovine","type":"related"},{"name":"lymphoma, bovine","type":"related"},{"name":"lymphomas, bovine","type":"related"},{"name":"lymphosarcoma, bovine","type":"related"},{"name":"lymphosarcomas, bovine","type":"related"}],"termid":"MONDO:0025489","xrefs":{"Monarch":{"xref_id":"0025489"}}}


id: GO:0035943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of estrone into the circulatory system.","definition_xrefs":["GOC:sl","PMID:8395854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"steroid hormone secretion","termid":"GO:0035929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"estrone secretion","synonyms":[{"name":"3-hydroxy-1,3,5(10)-estratrien-17-one secretion","type":"exact"},{"name":"folliculin secretion","type":"exact"}],"termid":"GO:0035943"}


id: GO:0098697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any ryanodine-sensitive calcium-release channel activity that is involved in regulation of postsynaptic cytosolic calcium ion concentration.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ryanodine-sensitive calcium-release channel activity","termid":"GO:0005219"},{"relation_name":"is_a","term_name":"calcium-induced calcium release activity involved in regulation of postsynaptic cytosolic calcium ion concentration","termid":"GO:1905058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ryanodine-sensitive calcium-release channel activity involved in regulation of postsynaptic cytosolic calcium levels","termid":"GO:0098697"}


id: MONDO:0018259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"didymosis aplasticosebacea","secondary_identifiers":["MEDGEN:1650408","UMLS:C4751600","Orphanet:370046","GARD:21591"],"synonyms":[{"name":"aplasia cutis congenita-nevus sebaceus syndrome","type":"exact"}],"termid":"MONDO:0018259","xrefs":{"Monarch":{"xref_id":"0018259"}}}


id: MONDO:0011549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypotrichosis in which the cause of the disease is a mutation in the APCDD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"},{"relation_name":"is_a","term_name":"hypotrichosis simplex","termid":"MONDO:0018914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis 1","secondary_identifiers":["DOID:0110698","MEDGEN:1644234","OMIM:605389","UMLS:C4551976"],"synonyms":[{"name":"APCDD1 hypotrichosis","type":"exact"},{"name":"HHS","type":"broad"},{"name":"HTS","type":"exact"},{"name":"HYPT1","type":"exact"},{"name":"hereditary generalised hypotrichosis simplex","type":"exact"},{"name":"hereditary generalized hypotrichosis simplex","type":"exact"},{"name":"hypotrichosis 1","type":"exact"},{"name":"hypotrichosis caused by mutation in APCDD1","type":"exact"},{"name":"hypotrichosis simplex, generalized, hereditary","type":"related"},{"name":"hypotrichosis type 1","type":"exact"}],"termid":"MONDO:0011549","xrefs":{"Monarch":{"xref_id":"0011549"}}}


id: MONDO:0007037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Achondroplasia is the most common form of chondrodysplasia, characterized by rhizomelia, exaggerated lumbar lordosis, brachydactyly, and macrocephaly with frontal bossing and midface hypoplasia.","definition_xrefs":["Orphanet:15"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with micromelia (obsolete MONDO:0018232)","termid":"MONDO:0018232"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"FGFR3-related chondrodysplasia","termid":"MONDO:0019685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"achondroplasia","secondary_identifiers":["GARD:8173","NANDO:1200877","OMIM:100800","ICD10CM:Q77.4","UMLS:C0001080","DOID:4480","MEDGEN:1289","icd11.foundation:24224082","MESH:D000130","NCIT:C34345","MedDRA:10000452","NANDO:2201009","SCTID:86268005","NORD:711"],"synonyms":[{"name":"ACH","type":"exact"},{"name":"achondroplasia","type":"exact"},{"name":"achondroplastic dwarfism","type":"related"},{"name":"achondroplastic physique","type":"exact"},{"name":"chondrodystrophia","type":"exact"}],"termid":"MONDO:0007037","xrefs":{"Monarch":{"xref_id":"0007037"}}}


id: GO:0044689
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-amino-5-(4-hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil + S-adenosyl-L-methionine = 5'-deoxyadenosine + 7,8-didemethyl-8-hydroxy-5-deazariboflavin + H+ + L-methionine + NH4+.","definition_xrefs":["PMID:14593448","RHEA:55204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase activity","secondary_identifiers":["EC:4.3.1.32","MetaCyc:RXN-19230"],"synonyms":[{"name":"FO synthase","type":"exact"}],"termid":"GO:0044689"}


id: PBO:0079604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2F pseudogene 1","termid":"PBO:0079604"}


id: PBO:0072219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19 pseudogene 2","termid":"PBO:0072219"}


id: PBO:0042102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 174","termid":"PBO:0042102"}


id: GO:0034967
data:
  {"annotated_genes":["SJAG_01926","SJAG_03627","SJAG_04186","SJAG_04396","SJAG_04389"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[68386,80475,80926,95122,106119],"is_not":false,"summary":null,"term":"GO:0034967"}]},"cv_name":"cellular_component","definition":"A histone deacetylase complex that is involved in transcriptional regulation. In S. cerevisiae, this complex consists of Set3p, Snt1p, Hos4p, Sif2p, Cpr1p, Hos2p, and Hst1p.","definition_xrefs":["GOC:ds","PMID:11711434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase complex","termid":"GO:0000118"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01926":null,"SJAG_03627":null,"SJAG_04186":null,"SJAG_04389":null,"SJAG_04396":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634","GO:0005654","GO:0005694"],"is_obsolete":false,"name":"Set3 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"HDAC3 complex","type":"exact"},{"name":"SET3C","type":"exact"}],"termid":"GO:0034967","terms_by_termid":{"GO:0034967":null}}


id: PBO:0050429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPK antisense RNA 1","termid":"PBO:0050429"}


id: MONDO:0001285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endometriosis","termid":"MONDO:0005133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometriosis of pelvic peritoneum","secondary_identifiers":["DOID:11429","ICD10CM:N80.3","ICD9:617.3","SCTID:198251001","UMLS:C0156345","icd11.foundation:1015401835","MEDGEN:510249"],"termid":"MONDO:0001285","xrefs":{"Monarch":{"xref_id":"0001285"}}}


id: PBO:0071916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3 pseudogene 1","termid":"PBO:0071916"}


id: FYPO:0004688
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer free large ribosomal subunits in the cytosol than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cytosolic large ribosomal subunit level","synonyms":[{"name":"cytosolic large ribosomal subunit present at decreased level","type":"exact"},{"name":"decreased 60S ribosomal subunit level","type":"exact"},{"name":"decreased cytosolic large ribosomal subunit level during mitotic cell cycle","type":"related"},{"name":"decreased cytosolic large ribosomal subunit level during vegetative growth","type":"exact"},{"name":"decreased large ribosomal subunit level","type":"broad"},{"name":"decreased level of cytosolic large ribosomal subunits","type":"related"},{"name":"reduced cytosolic large ribosomal subunit level","type":"exact"}],"termid":"FYPO:0004688"}


id: PBO:0001156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Tyrosine","termid":"PBO:0001156"}


id: MONDO:0017860
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Methanol poisoning is a rare poisoning resulting in elevated anion gap metabolic acidosis, due to the alcohol dehydrogenase (ADH)-mediated production of formic acid (which is poisonous to the central nervous system), and characterized by dizziness, nausea, vomiting, confusion, metabolic acidosis, visual disturbances (which if left untreated can lead to blindness), coma, and death (due to respiratory failure).","definition_xrefs":["Orphanet:31825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methanol poisoning","secondary_identifiers":["GARD:18804"],"termid":"MONDO:0017860","xrefs":{"Monarch":{"xref_id":"0017860"}}}


id: PBO:0074529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA C5","termid":"PBO:0074529"}


id: PBO:0043973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citrate synthase","termid":"PBO:0043973"}


id: GO:0010005
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Arrays of microtubules underlying and connected to the plasma membrane, in the cortical cytosol, oriented mainly with their axes transverse to the long axis of the cell (and root in plants). In plants it influences the direction of cellulose microfibril deposition.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical microtubule","termid":"GO:0055028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0005737","GO:0005938"],"is_obsolete":false,"name":"cortical microtubule, transverse to long axis","termid":"GO:0010005"}


id: PBO:0041175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin subfamily 1 member A1 pseudogene 1","termid":"PBO:0041175"}


id: PBO:0062871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTUD6B antisense RNA 1 (head to head)","termid":"PBO:0062871"}


id: GO:0034178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to the endolysosomal toll-like receptor 13.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endolysosomal toll-like receptor signaling pathway","termid":"GO:0140894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"toll-like receptor 13 signaling pathway","synonyms":[{"name":"TLR13 signaling pathway","type":"exact"},{"name":"toll-like receptor 13 signalling pathway","type":"exact"}],"termid":"GO:0034178"}


id: PBO:0088477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RagA/B GTPase Gtr1","termid":"PBO:0088477"}


id: GO:0071801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of podosome assembly.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"podosome assembly","termid":"GO:0071800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"regulation of podosome assembly","termid":"GO:0071801"}


id: GO:0052335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of the symbiont cytoskeleton. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by host of symbiont cytoskeleton (obsolete GO:0052335)","termid":"GO:0052335"}


id: PBO:0057685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1273h","termid":"PBO:0057685"}


id: MONDO:0003858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the anterior visual pathway.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"optic nerve neoplasm","termid":"MONDO:0002640"},{"relation_name":"is_a","term_name":"optic tract meningioma","termid":"MONDO:0024648"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior optic tract meningioma","secondary_identifiers":["NCIT:C7538","UMLS:C1332308","DOID:6334","MEDGEN:231382"],"synonyms":[{"name":"anterior visual pathway meningioma","type":"exact"}],"termid":"MONDO:0003858","xrefs":{"Monarch":{"xref_id":"0003858"}}}


id: PBO:0031167
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutamate_import_during_vegetative_growth","termid":"PBO:0031167"}


id: PBO:0086077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function with similarity to F-box proteins; interacts with the core SCF ubiquitin ligase complex subunits Skp1p and Cdc53p; LUG1 deletion prevents cells containing the [URE3] prion or lacking Ure2p from growing on glycerol","termid":"PBO:0086077"}


id: PBO:0053107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LCK proto-oncogene, Src family tyrosine kinase","termid":"PBO:0053107"}


id: GO:2000388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of antral ovarian follicle growth.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"is_a","term_name":"regulation of antral ovarian follicle growth","termid":"GO:2000387"},{"relation_name":"positively_regulates","term_name":"antral ovarian follicle growth","termid":"GO:0001547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antral ovarian follicle growth","termid":"GO:2000388"}


id: MONDO:0018337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete severe neonatal lactic acidosis due to NFS1-ISD11 complex deficiency (obsolete MONDO:0018337)","termid":"MONDO:0018337","xrefs":{"Monarch":{"xref_id":"0018337"}}}


id: PBO:0000499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermediate peptidase Oct1 (predicted)","termid":"PBO:0000499"}


id: PATO:0001558
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process inhering in a bearer by virtue of the bearer's lacking a processual part as specified by the additional entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extra or missing processual parts","termid":"PATO:0001564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lacking processual parts","termid":"PATO:0001558"}


id: PBO:0029362
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_centromeric_outer_repeat_transcript_level","termid":"PBO:0029362"}


id: PR:G2TRT7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1235.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRT7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transmembrane protein C1235.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.17","synonyms":[{"name":"Spom972h-SPCC1235.17","type":"exact"}],"termid":"PR:G2TRT7"}


id: GO:1901790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-(2,3-dihydroxyphenyl)propanoate.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"3-(2,3-dihydroxyphenyl)propanoate metabolic process","synonyms":[{"name":"3-(2,3-dihydroxyphenyl)propanoate metabolism","type":"exact"}],"termid":"GO:1901790"}


id: PBO:0001023
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.10","termid":"PBO:0001023"}


id: GO:1902893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microRNA (miRNA) gene transcription.","definition_xrefs":["GOC:TermGenie","GOC:dph","PMID:24699545","GOC:kmv","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"is_a","term_name":"regulation of miRNA metabolic process","termid":"GO:2000628"},{"relation_name":"regulates","term_name":"miRNA transcription","termid":"GO:0061614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"regulation of miRNA transcription","synonyms":[{"name":"regulation of miRNA gene transcription","type":"exact"},{"name":"regulation of microRNA gene transcription","type":"exact"},{"name":"regulation of pri-miRNA transcription by RNA polymerase II","type":"exact"},{"name":"regulation of pri-miRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of primary miRNA gene transcription","type":"exact"}],"termid":"GO:1902893"}


id: PBO:0092019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Tryptophan (cca), mitochondrial","termid":"PBO:0092019"}


id: PBO:0053548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 555","termid":"PBO:0053548"}


id: PBO:0059882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 5","termid":"PBO:0059882"}


id: PBO:0001574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor Sec73 (predicted)","termid":"PBO:0001574"}


id: PATO:0002214
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A lobed quality inhering in a bearer by virtue of the bearer's being divided into or having two lobes.","definition_xrefs":["thefreedictionary:http://www.thefreedictionary.com/bilobed"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lobed","termid":"PATO:0001979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bilobed","termid":"PATO:0002214"}


id: PBO:0054417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1813","termid":"PBO:0054417"}


id: PBO:0031178
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_catastrophe_with_cut","termid":"PBO:0031178"}


id: PBO:0039035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 12, pseudogene","termid":"PBO:0039035"}


id: GO:0005298
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: proline(out) + Na+(out) = proline(in) + Na+(in).","definition_xrefs":["TC:2.A.22.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:sodium symporter activity","termid":"GO:0005283"},{"relation_name":"is_a","term_name":"organic acid:sodium symporter activity","termid":"GO:0005343"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"proline:sodium symporter activity","secondary_identifiers":["Reactome:R-HSA-444100","MetaCyc:TRANS-RXN-118","RHEA:28967"],"synonyms":[{"name":"sodium/proline symporter activity","type":"exact"}],"termid":"GO:0005298"}


id: GO:0106159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent small RNA loading onto RISC.","definition_xrefs":["GOC:ha","PMID:29775584"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of small RNA loading onto RISC (obsolete GO:0106159)","termid":"GO:0106159"}


id: GO:0045327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a covalent cross-link between DNA and a peptidyl-tyrosine residue.","definition_xrefs":["GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-DNA covalent cross-linking via peptidyl-tyrosine (obsolete GO:0045327)","synonyms":[{"name":"DNA-protein covalent cross-linking via peptidyl-tyrosine","type":"exact"}],"termid":"GO:0045327"}


id: GO:0005619
data:
  {"annotated_genes":["SJAG_03483","SJAG_03057","SJAG_01321","SJAG_02916","SJAG_04236","SJAG_03013","SJAG_04771"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92115,111041,116077,116371,119799],"is_not":false,"summary":null,"term":"GO:0005619"},{"annotations":[93651],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005631"},{"annotations":[89366],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005632"}]},"cv_name":"cellular_component","definition":"The specialized cell wall of the ascospore (spore), which is the product of meiotic division. Examples of this component are found in Fungi.","definition_xrefs":["ISBN:0879693568","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal-type cell wall","termid":"GO:0009277"},{"relation_name":"is_a","term_name":"spore wall","termid":"GO:0031160"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01321":null,"SJAG_02916":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03483":null,"SJAG_04236":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"ascospore wall","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fungal-type spore wall","type":"broad"}],"termid":"GO:0005619","terms_by_termid":{"GO:0005619":null,"GO:0005631":null,"GO:0005632":null}}


id: PR:P22190
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPMIT.03 gene.","definition_xrefs":["UniProtKB:P22190","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized cox1 intron-2 37.2 kDa protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.03","synonyms":[{"name":"Spom972h-SPMIT.03","type":"exact"},{"name":"maturase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P22190"}


id: PBO:0041735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin-lysine N-methyltransferase","termid":"PBO:0041735"}


id: PBO:0070139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 53 pseudogene","termid":"PBO:0070139"}


id: MONDO:0003619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute or chronic inflammation of the fallopian tube. It is most often caused by Neisseria gonorrhoeae and Chlamydia trachomatis infections. The infections usually originate in the vagina and ascend to the fallopian tube. Symptoms include abdominal, pelvic, and lower back pain, pain during ovulation and sexual intercourse, fever, nausea, and vomiting. Complications include infertility and ectopic pregnancy.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pelvic inflammatory disease","termid":"MONDO:0000922"},{"relation_name":"is_a","term_name":"fallopian tube disorder","termid":"MONDO:0002156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salpingitis","secondary_identifiers":["UMLS:C0036130","NCIT:C26880","DOID:5733","MEDGEN:20646","MESH:D012488","SCTID:88157006"],"synonyms":[{"name":"fallopian tube inflammation","type":"exact"},{"name":"inflammation of fallopian tube","type":"exact"}],"termid":"MONDO:0003619","xrefs":{"Monarch":{"xref_id":"0003619"}}}


id: GO:0016473
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A sodium ion-transporting two-sector ATPase complex that catalyzes the phosphorylation of ADP to ATP. The complex comprises a membrane sector (F0) that carries out proton transport and a cytoplasmic compartment sector (F1) that catalyzes ATP synthesis by a rotational mechanism.","definition_xrefs":["PMID:14656431","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion-transporting two-sector ATPase complex","termid":"GO:0016472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"sodium ion-transporting F-type ATPase complex","synonyms":[{"name":"sodium-translocating F-type ATPase complex","type":"exact"}],"termid":"GO:0016473"}


id: PBO:0060578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 14","termid":"PBO:0060578"}


id: PBO:0036404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anamorsin family iron-sulfur cluster protein Dre2 (predicted)","termid":"PBO:0036404"}


id: GO:0075152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of receptor-mediated signal transduction in response to host (obsolete GO:0075152)","synonyms":[{"name":"negative regulation of symbiont receptor-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075152"}


id: GO:0021719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the superior olivary nucleus is generated and organized. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound.","definition_xrefs":["GOC:jid","GOC:cls","ISBN:0838580343","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"pons morphogenesis","termid":"GO:0021583"},{"relation_name":"part_of","term_name":"superior olivary nucleus development","termid":"GO:0021718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior olivary nucleus morphogenesis","synonyms":[{"name":"superior olive morphogenesis","type":"related"}],"termid":"GO:0021719"}


id: PBO:0070544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 10","termid":"PBO:0070544"}


id: MONDO:0001151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition of mild to moderate high blood pressure that has no identifiable cause.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"essential hypertension","termid":"MONDO:0001134"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign essential hypertension","secondary_identifiers":["MEDGEN:56371","SCTID:1201005","ICD9:401.1","UMLS:C0155583","DOID:10913"],"synonyms":[{"name":"benign essential hypertension","type":"exact"}],"termid":"MONDO:0001151","xrefs":{"Monarch":{"xref_id":"0001151"}}}


id: PBO:0059078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoacylglycerol O-acyltransferase 1","termid":"PBO:0059078"}


id: PBO:0002281
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.39","termid":"PBO:0002281"}


id: MONDO:0010673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifier, X-linked, for Neurofunctional defects","secondary_identifiers":["MEDGEN:326945","MESH:C564098","OMIM:309840","UMLS:C1839708"],"synonyms":[{"name":"Tourette syndrome, modifier of","type":"related"},{"name":"modifier, X-linked, for Neurofunctional defects","type":"exact"}],"termid":"MONDO:0010673","xrefs":{"Monarch":{"xref_id":"0010673"}}}


id: PBO:0066616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHPN1 antisense RNA 1 (head to head)","termid":"PBO:0066616"}


id: PBO:0051716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like 3","termid":"PBO:0051716"}


id: MONDO:0850074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"non-syndromic unilambdoid craniosynostosis","secondary_identifiers":["UMLS:C5680402","GARD:22471","MEDGEN:1842908","Orphanet:620113"],"termid":"MONDO:0850074","xrefs":{"Monarch":{"xref_id":"0850074"}}}


id: MONDO:0018185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital anomaly of the great veins (obsolete MONDO:0018185)","secondary_identifiers":["Orphanet:363189"],"termid":"MONDO:0018185","xrefs":{"Monarch":{"xref_id":"0018185"}}}


id: GO:0008880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucuronate = D-fructuronate. Also converts D-galacturonate to D-tagaturonate.","definition_xrefs":["EC:5.3.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glucuronate isomerase activity","secondary_identifiers":["MetaCyc:GLUCUROISOM-RXN"],"synonyms":[{"name":"D-glucuronate aldose-ketose-isomerase activity","type":"related"},{"name":"D-glucuronate isomerase activity","type":"related"},{"name":"D-glucuronate ketol-isomerase activity","type":"related"},{"name":"uronate isomerase activity","type":"related"},{"name":"uronic acid isomerase activity","type":"related"},{"name":"uronic isomerase activity","type":"related"}],"termid":"GO:0008880"}


id: MONDO:0971047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRC-2 complex-related overgrowth spectrum","secondary_identifiers":["UMLS:C5925135","Orphanet:659387","MEDGEN:1863739"],"termid":"MONDO:0971047","xrefs":{"Monarch":{"xref_id":"0971047"}}}


id: MONDO:0700292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmoplastic fibroma","termid":"MONDO:0700292","xrefs":{"Monarch":{"xref_id":"0700292"}}}


id: PR:Q6LA54
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3H5.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q6LA54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C3H5.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.08c","synonyms":[{"name":"Spom972h-SPAC3H5.08c","type":"exact"}],"termid":"PR:Q6LA54"}


id: GO:0014043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neuron maturation.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron maturation","termid":"GO:0014041"},{"relation_name":"is_a","term_name":"negative regulation of cell maturation","termid":"GO:1903430"},{"relation_name":"negatively_regulates","term_name":"neuron maturation","termid":"GO:0042551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron maturation","synonyms":[{"name":"down regulation of neuron maturation","type":"exact"},{"name":"down-regulation of neuron maturation","type":"exact"},{"name":"downregulation of neuron maturation","type":"exact"},{"name":"inhibition of neuron maturation","type":"narrow"}],"termid":"GO:0014043"}


id: GO:0070051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to fibrinogen, a highly soluble hexameric glycoprotein complex that is found in blood plasma and is converted to fibrin by thrombin in the coagulation cascade.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"fibrinogen binding","termid":"GO:0070051"}


id: PBO:0029842
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_maintenance_of_protein_localization_to_heterochromatin_at_centromere_outer_repeat","termid":"PBO:0029842"}


id: MONDO:0007434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary failure of tooth eruption","secondary_identifiers":["MESH:C565114","Orphanet:412206","UMLS:C1852222","MEDGEN:338882","DOID:0111341","OMIM:125350","GARD:17692"],"synonyms":[{"name":"PFE","type":"exact"},{"name":"dental noneruption","type":"related"},{"name":"failure of tooth eruption, primary","type":"related"},{"name":"posterior Openbite malocclusion, familial","type":"related"},{"name":"primary failure of eruption, nonsyndromic","type":"related"},{"name":"primary retention of teeth","type":"exact"},{"name":"unerupted second primary molar","type":"related"}],"termid":"MONDO:0007434","xrefs":{"Monarch":{"xref_id":"0007434"}}}


id: MONDO:1011536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperkalemic periodic paralysis that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperkalemic periodic paralysis, non-human animal","termid":"MONDO:1011433"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperkalemic periodic paralysis, horse","secondary_identifiers":["OMIA:000785-9796"],"synonyms":[{"name":"HYPP, horse","type":"exact"}],"termid":"MONDO:1011536","xrefs":{"Monarch":{"xref_id":"1011536"}}}


id: SO:0001154
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of four consecutive peptide residues, of which the i+2 residue is proline, and that may contain one H-bond, which, if present, is between the main-chain CO of the first residue and the main-chain NH of the fourth and is characterized by the dihedral angles: Residue(i+1): phi ~ -120 degrees, psi ~ 120 degrees. Residue(i+2): phi ~ -60 degrees, psi ~ 0 degrees.","definition_xrefs":["SO:cb","PMID:2371257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_turn_type_six","termid":"SO:0001150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn_type_six_b","synonyms":[{"name":"beta turn type six b","type":"exact"},{"name":"type VIb beta turn","type":"exact"},{"name":"type VIb turn","type":"exact"}],"termid":"SO:0001154"}


id: GO:0070580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving base J (beta-D-glucosyl-hydroxymethyluracil), a hypermodified thymidine residue found in the genome of kinetoplastid parasites. This modified base is localized primarily to repetitive DNA, namely the telomeres, and is implicated in the regulation of antigenic variation. The base is synthesized in a two-step pathway. Initially, a thymidine residue in DNA is hydroxylated by a thymidine hydroxylase (TH) to form the intermediate hydroxymethyluracil, which is then glucosylated to form base J.","definition_xrefs":["PMID:19114062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA modification","termid":"GO:0006304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"base J metabolic process","synonyms":[{"name":"base J metabolism","type":"exact"},{"name":"beta-D-glucosyl-HOMedU metabolic process","type":"exact"},{"name":"beta-D-glucosyl-hydroxymethyluracil metabolism","type":"exact"}],"termid":"GO:0070580"}


id: MONDO:0021250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the tonsil.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"disorder of pharynx","termid":"MONDO:0020592"},{"relation_name":"is_a","term_name":"pharynx neoplasm","termid":"MONDO:0021246"},{"relation_name":"is_a","term_name":"lymphoid system disorder","termid":"MONDO:0044986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"tonsil neoplasm","secondary_identifiers":["SCTID:127227003","UMLS:C0040422","NCIT:C3417","MEDGEN:21201"],"synonyms":[{"name":"neoplasm of the tonsil","type":"exact"},{"name":"neoplasm of tonsil","type":"exact"},{"name":"tonsil neoplasm (disease)","type":"exact"},{"name":"tonsil tumor","type":"exact"},{"name":"tonsil tumour","type":"exact"},{"name":"tonsillar neoplasm","type":"exact"},{"name":"tonsillar neoplasms","type":"exact"},{"name":"tonsillar tumor","type":"exact"},{"name":"tonsillar tumour","type":"exact"},{"name":"tumor of the tonsil","type":"exact"},{"name":"tumor of tonsil","type":"exact"},{"name":"tumour of the tonsil","type":"exact"},{"name":"tumour of tonsil","type":"exact"}],"termid":"MONDO:0021250","xrefs":{"Monarch":{"xref_id":"0021250"}}}


id: PBO:0070126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 40 pseudogene","termid":"PBO:0070126"}


id: PBO:0005507
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae GPI8","termid":"PBO:0005507"}


id: FYPO:0001707
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the incidence of mitotic cell cycle arrest or delay due to regulation by any mitotic DNA damage checkpoint is greater than in wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA damage checkpoint","termid":"FYPO:0000006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0000298","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased mitotic DNA damage checkpoint activation","synonyms":[{"name":"increased mitotic DNA damage checkpoint activation under non-stressed conditions","type":"narrow"}],"termid":"FYPO:0001707"}


id: PBO:0017806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid family protease associated with COP1 coated vesicle (predicted)","termid":"PBO:0017806"}


id: GO:0030041
data:
  {"annotated_genes":["SJAG_02566","SJAG_02700","SJAG_04479","SJAG_04982","SJAG_00677","SJAG_01268","SJAG_00279","SJAG_02245","SJAG_01384","SJAG_01894","SJAG_01993","SJAG_04100","SJAG_03086","SJAG_00521"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66029,67872,95708,99636,100752],"is_not":false,"summary":null,"term":"GO:0030041"},{"annotations":[94206,81977,80924,77314],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[68635,69535,79152,81222,78508],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030833"}]},"cv_name":"biological_process","definition":"Assembly of actin filaments by the addition of actin monomers to a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin polymerization or depolymerization","termid":"GO:0008154"},{"relation_name":"is_a","term_name":"protein polymerization","termid":"GO:0051258"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_00677":null,"SJAG_01268":null,"SJAG_01384":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02245":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0030036","GO:0044085","GO:0008150","GO:0007010","GO:0065003"],"is_obsolete":false,"name":"actin filament polymerization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"actin polymerization","type":"exact"},{"name":"actin polymerizing activity","type":"related"}],"termid":"GO:0030041","terms_by_termid":{"GO:0030041":null,"GO:0030833":null,"GO:0051016":null}}


id: MONDO:0012402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid dependence, susceptibility to, 1","secondary_identifiers":["OMIM:610064","MEDGEN:400600","UMLS:C1864733"],"synonyms":[{"name":"Ods1","type":"related"},{"name":"opioid dependence, susceptibility to, 1","type":"exact"},{"name":"opioid dependence, susceptibility to, type 1","type":"exact"}],"termid":"MONDO:0012402","xrefs":{"Monarch":{"xref_id":"0012402"}}}


id: MONDO:0020628
data:
  {"annotated_genes":["SJAG_04816"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88247],"is_not":false,"summary":null,"term":"MONDO:0020628"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"microcephaly, growth restriction and increased sister chromatid exchange","termid":"MONDO:0020629"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04816":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"microcephaly, growth restriction, and increased sister chromatid exchange 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1648384","OMIM:618097","UMLS:C4748176","GARD:18507"],"synonyms":[{"name":"MGRISCE2","type":"related"},{"name":"microcephaly, growth restriction, and increased sister chromatid exchange 2","type":"exact"}],"termid":"MONDO:0020628","terms_by_termid":{"MONDO:0020628":null},"xrefs":{"Monarch":{"xref_id":"0020628"}}}


id: PBO:0059793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 19","termid":"PBO:0059793"}


id: PBO:0061325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B3","termid":"PBO:0061325"}


id: SO:1001281
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Four base pair sequence immediately downstream of the redefined region. The redefined region is a frameshift site. The quadruplet is 2 overlapping codons.","definition_xrefs":["SO:ke","PMID:12519954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_recoding_site","termid":"SO:1001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flanking_three_prime_quadruplet_recoding_signal","synonyms":[{"name":"flanking three prime quadruplet recoding signal","type":"exact"}],"termid":"SO:1001281"}


id: GO:0006462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein complex assembly, multichaperone pathway (obsolete GO:0006462)","synonyms":[{"name":"protein complex assembly, multichaperone pathway","type":"exact"}],"termid":"GO:0006462"}


id: MONDO:0022556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete oculo-cerebral dysplasia (obsolete MONDO:0022556)","termid":"MONDO:0022556","xrefs":{"Monarch":{"xref_id":"0022556"}}}


id: GO:0051977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of phospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A lysophospholipid is a phospholipid that lacks one of its fatty acyl chains; it is an intermediate formed during digestion of dietary and biliary phospholipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transport","termid":"GO:0015914"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"lysophospholipid transport","termid":"GO:0051977"}


id: MONDO:0016059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft lip/palate-deafness-sacral lipoma syndrome is characterized by cleft lip/palate, profound sensorineural deafness, and a sacral lipoma. It has been described in two brothers of Chinese origin born to non consanguineous parents. Additional findings included appendages on the heel and thigh, or anterior sacral meningocele and dislocated hip. The mode of inheritance is probably autosomal or X-linked recessive.","definition_xrefs":["Orphanet:2003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft lip/palate-deafness-sacral lipoma syndrome","secondary_identifiers":["GARD:18755","UMLS:C4274888","MEDGEN:905203","SCTID:716007007"],"synonyms":[{"name":"Lowry-Yong syndrome","type":"exact"}],"termid":"MONDO:0016059","xrefs":{"Monarch":{"xref_id":"0016059"}}}


id: GO:0018276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of an isopeptide cross-link between peptidyl-lysine and peptidyl-glycine to produce N6-glycyl-L-lysine. This is distinct from the formation of the thiolester intermediate, which occurs during ubiquitination.","definition_xrefs":["RESID:AA0125"],"gene_count":0,"genotype_count":0,"name":"obsolete isopeptide cross-linking via N6-glycyl-L-lysine (obsolete GO:0018276)","termid":"GO:0018276"}


id: GO:0010696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the process involving the release of duplicated mitotic spindle pole bodies (SPBs) and their migration away from each other within the nuclear membrane.","definition_xrefs":["GOC:tb","PMID:16792804","GOC:dph","PMID:18500339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle pole body separation","termid":"GO:0010695"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"initial mitotic spindle pole body separation","termid":"GO:0000073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic spindle pole body separation","synonyms":[{"name":"positive regulation of SPB separation","type":"exact"}],"termid":"GO:0010696"}


id: PBO:0027038
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_binding_at_centromere_central_core","termid":"PBO:0027038"}


id: GO:0046914
data:
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id: MONDO:0700100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"},{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia, non-human animal","termid":"MONDO:0700100","xrefs":{"Monarch":{"xref_id":"0700100"}}}


id: PBO:0036219
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_prospore_membrane_formation","termid":"PBO:0036219"}


id: PBO:0090626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine O-acetyltransferase","termid":"PBO:0090626"}


id: GO:0015777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of teichoic acid into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Teichoic acid is any polymer occurring in the cell wall, membrane or capsule of Gram-positive bacteria and containing chains of glycerol phosphate or ribitol phosphate residues.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"teichoic acid transport","termid":"GO:0015777"}


id: GO:0060986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a hormone into the circulatory system.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone secretion","termid":"GO:0046879"},{"relation_name":"part_of","term_name":"endocrine process","termid":"GO:0050886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"endocrine hormone secretion","termid":"GO:0060986"}


id: PBO:0053785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1036","termid":"PBO:0053785"}


id: FYPO:0003335
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype that reflects increased occurrence of galactose-specific flocculation. Galactose-specific flocculation is the non-sexual aggregation of single cells, mediated by the binding of cell wall proteins on one cell to galactose residues on the other.","definition_xrefs":["GO:0036349","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased flocculation","termid":"FYPO:0000155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased galactose-specific flocculation","synonyms":[{"name":"flocculating cells, galactose-specific","type":"exact"}],"termid":"FYPO:0003335"}


id: SO:0001376
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methyldihydrouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methyldihydrouridine","secondary_identifiers":["RNAMOD:093"],"synonyms":[{"name":"5-methyldihydrouridine","type":"exact"},{"name":"five methyldihydrouridine","type":"exact"},{"name":"m5D","type":"exact"}],"termid":"SO:0001376"}


id: PBO:0002656
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DiGeorge syndrome","termid":"PBO:0002656"}


id: PBO:0039666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 3 subunit mu 1","termid":"PBO:0039666"}


id: PBO:0028306
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_mitotic_S_phase","termid":"PBO:0028306"}


id: PBO:0059993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 13","termid":"PBO:0059993"}


id: MONDO:0971044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, classic-like, 3","secondary_identifiers":["MEDGEN:1861383","OMIM:620865","UMLS:C5935631"],"termid":"MONDO:0971044","xrefs":{"Monarch":{"xref_id":"0971044"}}}


id: PBO:0054854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2268","termid":"PBO:0054854"}


id: PBO:0017948
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SEC12","termid":"PBO:0017948"}


id: GO:0018905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dimethyl ether, CH3-O-CH3, the simplest ether. Dimethyl ether, also known wood ether and methyl ether, is a colorless gas that has been used in refrigeration applications.","definition_xrefs":["UM-BBD_pathwayID:dme"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dimethyl ether metabolic process","synonyms":[{"name":"dimethyl ether metabolism","type":"exact"},{"name":"methyl ether metabolic process","type":"exact"},{"name":"methyl ether metabolism","type":"exact"}],"termid":"GO:0018905"}


id: PBO:0112743
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yeast hsp78 and hsp104 are related to human CLBP at the C-term but have different N-terminal domains possibly due to some rearrangement in the metazoan lineage","termid":"PBO:0112743"}


id: MONDO:0009323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Halothane hepatitis","secondary_identifiers":["SCTID:235873001","OMIM:234350","MEDGEN:66842","UMLS:C0241913","MESH:C562477"],"synonyms":[{"name":"Halothane hepatitis","type":"exact"}],"termid":"MONDO:0009323","xrefs":{"Monarch":{"xref_id":"0009323"}}}


id: PBO:0053769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1014","termid":"PBO:0053769"}


id: PBO:0092021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit 6","termid":"PBO:0092021"}


id: MONDO:0030454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 39","secondary_identifiers":["OMIM:619562","MEDGEN:1794210","UMLS:C5562000"],"synonyms":[{"name":"JBTS39","type":"exact"}],"termid":"MONDO:0030454","xrefs":{"Monarch":{"xref_id":"0030454"}}}


id: GO:0034102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The selective elimination of erythrocytes from the body by autoregulatory mechanisms.","definition_xrefs":["PMID:12905029","GOC:add","PMID:14754397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue remodeling","termid":"GO:0048771"},{"relation_name":"part_of","term_name":"erythrocyte homeostasis","termid":"GO:0034101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"erythrocyte clearance","synonyms":[{"name":"RBC clearance","type":"exact"},{"name":"neocytolysis","type":"narrow"},{"name":"red blood cell clearance","type":"exact"}],"termid":"GO:0034102"}


id: MONDO:1011668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perosomus elumbis, non-human animal","secondary_identifiers":["OMIA:000789"],"termid":"MONDO:1011668","xrefs":{"Monarch":{"xref_id":"1011668"}}}


id: SO:0000737
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a mitochondria.","direct_ancestors":[{"relation_name":"is_a","term_name":"organelle_sequence","termid":"SO:0000736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial_sequence","synonyms":[{"name":"mitochondrial sequence","type":"exact"}],"termid":"SO:0000737"}


id: GO:1904477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of small GTPase binding.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:15798216"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of small GTPase binding (obsolete GO:1904477)","synonyms":[{"name":"activation of Ras GTPase binding","type":"narrow"},{"name":"positive regulation of Ras GTPase binding","type":"narrow"},{"name":"up regulation of small GTPase binding","type":"exact"},{"name":"up-regulation of small GTPase binding","type":"exact"},{"name":"upregulation of small GTPase binding","type":"exact"}],"termid":"GO:1904477"}


id: PBO:0086550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YEL028W is not an essential gene","termid":"PBO:0086550"}


id: MONDO:0014504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Perrault syndrome in which the cause of the disease is a mutation in the TWNK gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Perrault syndrome","termid":"MONDO:0017312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005047","MONDO:0006025","MONDO:0004069"],"is_obsolete":false,"name":"Perrault syndrome 5","secondary_identifiers":["MEDGEN:863744","OMIM:616138","GARD:16062","UMLS:C4015307"],"synonyms":[{"name":"PRLTS5","type":"related"},{"name":"Perrault syndrome 5","type":"exact"},{"name":"Perrault syndrome caused by mutation in TWNK","type":"exact"},{"name":"Perrault syndrome type 5","type":"exact"},{"name":"TWNK Perrault syndrome","type":"exact"}],"termid":"MONDO:0014504","xrefs":{"Monarch":{"xref_id":"0014504"}}}


id: GO:2001070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to starch.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"starch binding","synonyms":[{"name":"amidon binding","type":"related"},{"name":"amylum binding","type":"related"}],"termid":"GO:2001070"}


id: GO:0085011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the symbiont organism by a Sec complex. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by Sec complex (obsolete GO:0085011)","synonyms":[{"name":"interaction with host via protein secreted by Sec secretion system","type":"exact"}],"termid":"GO:0085011"}


id: FYPO:0001823
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to chlorpromazine. Cells stop growing (and may die) at a concentration of chlorpromazine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to chlorpromazine","synonyms":[{"name":"hypersensitive to chlorpromazine","type":"exact"},{"name":"sensitive to chlorpromazine during mitotic cell cycle","type":"related"},{"name":"sensitive to chlorpromazine during vegetative growth","type":"exact"}],"termid":"FYPO:0001823"}


id: GO:0016143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving S-glycosides, any compound in which a glycosyl group has been substituted into a thiol group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"glycosyl compound metabolic process","termid":"GO:1901657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"S-glycoside metabolic process","synonyms":[{"name":"S-glycoside metabolism","type":"exact"},{"name":"thioglycoside metabolic process","type":"exact"},{"name":"thioglycoside metabolism","type":"exact"}],"termid":"GO:0016143"}


id: GO:0050273
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-succinylglutathione + H2O = glutathione + H+ + succinate.","definition_xrefs":["EC:3.1.2.13","RHEA:16713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"S-succinylglutathione hydrolase activity","secondary_identifiers":["KEGG_REACTION:R00499","MetaCyc:S-SUCCINYLGLUTATHIONE-HYDROLASE-RXN"],"termid":"GO:0050273"}


id: GO:0005230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated monoatomic ion channel activity","termid":"GO:0015276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"extracellular ligand-gated monoatomic ion channel activity","synonyms":[{"name":"extracellular ligand-gated ion channel activity","type":"broad"}],"termid":"GO:0005230"}


id: GO:1990959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of eosinophils such that the total number of eosinophils within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["PMID:10606160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte homeostasis","termid":"GO:0001776"},{"relation_name":"is_a","term_name":"myeloid cell homeostasis","termid":"GO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil homeostasis","synonyms":[{"name":"eosinocyte homeostasis","type":"exact"},{"name":"eosinophilic granulocyte homeostasis","type":"exact"},{"name":"eosinophilic leucocyte homeostasis","type":"exact"},{"name":"eosinophilic leukocyte homeostasis","type":"exact"}],"termid":"GO:1990959"}


id: PBO:0048324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 35","termid":"PBO:0048324"}


id: PBO:0041891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catsper channel auxiliary subunit zeta","termid":"PBO:0041891"}


id: GO:0051983
data:
  {"annotated_genes":["SJAG_04999","SJAG_02498","SJAG_02332","SJAG_03575","SJAG_00460","SJAG_04597","SJAG_00244","SJAG_03353","SJAG_04853","SJAG_05290","SJAG_01837","SJAG_04259","SJAG_04140","SJAG_02169","SJAG_04126","SJAG_05329","SJAG_04280","SJAG_02336","SJAG_05236","SJAG_03351","SJAG_03327","SJAG_02380","SJAG_01297","SJAG_00145","SJAG_01956","SJAG_01805","SJAG_02451","SJAG_01515","SJAG_01679","SJAG_04884","SJAG_00082","SJAG_04573","SJAG_04699","SJAG_03126","SJAG_01082","SJAG_03350","SJAG_02104","SJAG_04457","SJAG_03681","SJAG_03048","SJAG_00883","SJAG_01330","SJAG_04464","SJAG_00666","SJAG_04968"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117903,116269,105826,113946,92595,101506,115777,109188,110218],"is_not":false,"rel_names":["is_a","negatively_regulates","regulates","positively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[108271,116496],"is_not":false,"rel_names":["regulates","negatively_regulates","is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[77147,118675],"is_not":false,"rel_names":["is_a","negatively_regulates","regulates"],"summary":null,"term":"GO:0033316"},{"annotations":[100605,102062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990949"},{"annotations":[104221,102063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990950"},{"annotations":[80162,72617,74801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007091"},{"annotations":[111882,116499,117560,103729,108273,101348],"is_not":false,"rel_names":["regulates","negatively_regulates","is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[104295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902424"},{"annotations":[100606],"is_not":false,"rel_names":["is_a","regulates","negatively_regulates"],"summary":null,"term":"GO:1902103"},{"annotations":[105213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[96084],"is_not":false,"rel_names":["is_a","negatively_regulates","regulates","positively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[104303],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902845"},{"annotations":[113947,118011,107129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[115782],"is_not":false,"rel_names":["positively_regulates","is_a","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[97062],"is_not":false,"rel_names":["regulates","is_a","positively_regulates"],"summary":null,"term":"GO:1905191"},{"annotations":[118682],"is_not":false,"rel_names":["is_a","regulates","positively_regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[95689,104038,116768,99611,104314,113361,102064],"is_not":false,"rel_names":["is_a","positively_regulates","regulates"],"summary":null,"term":"GO:0045842"},{"annotations":[118684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905824"},{"annotations":[95690,104315,113187,91871,118685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[98516,101526,101521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901970"},{"annotations":[96300,91872],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1902846"},{"annotations":[113422],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110161"},{"annotations":[112161,95770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090006"},{"annotations":[104323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062123"},{"annotations":[103269],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[113002],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032888"},{"annotations":[117052],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110162"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chromosome segregation, the process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"regulates","term_name":"chromosome 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of chromosome segregation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0051983","terms_by_termid":{"GO:0007091":null,"GO:0007094":null,"GO:0032888":null,"GO:0033316":null,"GO:0045842":null,"GO:0062123":null,"GO:0090006":null,"GO:0090267":null,"GO:0110161":null,"GO:0110162":null,"GO:0140429":null,"GO:0140499":null,"GO:1901970":null,"GO:1902103":null,"GO:1902424":null,"GO:1902425":null,"GO:1902426":null,"GO:1902845":null,"GO:1902846":null,"GO:1905191":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1905824":null,"GO:1990949":null,"GO:1990950":null,"GO:2000816":null}}


id: GO:0090220
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  {"annotated_genes":["SJAG_01538","SJAG_05226","SJAG_03092","SJAG_00756","SJAG_01777","SJAG_05196","SJAG_05260","SJAG_03685","SJAG_03680","SJAG_01263","SJAG_03287"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91634,65518],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[107054,89252,101845,91635,104753],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[117946,98629,119570,119708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045141"},{"annotations":[115984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044821"}]},"cv_name":"biological_process","definition":"The directed movement of a chromosome to the nuclear envelope that contributes to homologous chromosome segregation and precedes synapsis.","definition_xrefs":["GOC:dph","GOC:tb","PMID:19913287","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of chromosome localization","termid":"GO:0051303"},{"relation_name":"part_of","term_name":"homologous chromosome segregation","termid":"GO:0045143"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00756":null,"SJAG_01263":null,"SJAG_01538":null,"SJAG_01777":null,"SJAG_03092":null,"SJAG_03287":null,"SJAG_03680":null,"SJAG_03685":null,"SJAG_05196":null,"SJAG_05226":null,"SJAG_05260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0051179","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"chromosome localization to nuclear envelope involved in homologous chromosome segregation","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"chromosome localisation to nuclear envelope involved in homologous chromosome segregation","type":"exact"}],"termid":"GO:0090220","terms_by_termid":{"GO:0032121":null,"GO:0044821":null,"GO:0045141":null,"GO:0070197":null}}


id: GO:0018885
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carbon tetrachloride, a toxic, carcinogenic compound which is used as a general solvent in industrial degreasing operations. It is also used as grain fumigant and a chemical intermediate in the production of refrigerants.","definition_xrefs":["UM-BBD_pathwayID:ctc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated hydrocarbon metabolic process","termid":"GO:0042197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbon tetrachloride metabolic process","synonyms":[{"name":"carbon tetrachloride metabolism","type":"exact"}],"termid":"GO:0018885"}


id: GO:0061987
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving glucose that decreases the frequency, rate or extent or transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:11875061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription from RNA polymerase II promoter by glucose","termid":"GO:0000430"},{"relation_name":"is_a","term_name":"negative regulation of transcription by glucose","termid":"GO:0061986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"negative regulation of transcription from RNA polymerase II promoter by glucose","termid":"GO:0061987"}


id: PBO:0003315
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  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.5.4","termid":"PBO:0003315"}


id: SO:0002249
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS region corresponding to a mature protein region of a polypeptide.","direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_region","termid":"SO:0000851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature_protein_region_of_CDS","synonyms":[{"name":"INSDC_feature:mat_peptide","type":"exact"},{"name":"mature protein region of CDS","type":"exact"}],"termid":"SO:0002249"}


id: PBO:0085507
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S10, no bacterial homolog; RPS10B has a paralog, RPS10A, that arose from the whole genome duplication; mutations in the human homolog associated with Diamond-Blackfan anemia","termid":"PBO:0085507"}


id: GO:0061709
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  {"annotated_genes":["SJAG_04655","SJAG_00004","SJAG_04435","SJAG_00059","SJAG_04219","SJAG_05289","SJAG_00053","SJAG_03170","SJAG_01135","SJAG_02852","SJAG_04502","SJAG_02539","SJAG_03100","SJAG_04991","SJAG_04232","SJAG_01382","SJAG_03851"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59711,74458,74864,74878,76362,78676,80094,81397,81478,81503,81883,92284,101316,110531,112641,118603],"is_not":false,"summary":null,"term":"GO:0061709"},{"annotations":[91393],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"The selective autohagy process in which parts of the endoplasmic reticulum are loaded into autophagosomes, delivered to the vacuole, and degraded in response to changing cellular conditions.","definition_xrefs":["PMID:22481944","GOC:dph","GOC:autophagy","PMID:24060720","PMID:26040717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00053":null,"SJAG_00059":null,"SJAG_01135":null,"SJAG_01382":null,"SJAG_02539":null,"SJAG_02852":null,"SJAG_03100":null,"SJAG_03170":null,"SJAG_03851":null,"SJAG_04219":null,"SJAG_04232":null,"SJAG_04435":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_04991":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"reticulophagy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:1990766"],"synonyms":[{"name":"ER autophagy","type":"exact"},{"name":"ER degradation","type":"related"},{"name":"ER-phagy","type":"exact"},{"name":"autophagy of the ER","type":"exact"},{"name":"autophagy of the endoplasmic reticulum","type":"exact"},{"name":"endoplasmic reticulum autophagy","type":"exact"},{"name":"endoplasmic reticulum degradation","type":"related"}],"termid":"GO:0061709","terms_by_termid":{"GO:0061709":null,"GO:0140501":null}}


id: MONDO:0040653
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive form of ocular albinism (disease).","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"ocular albinism","termid":"MONDO:0017304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"autosomal recessive ocular albinism","secondary_identifiers":["SCTID:78921008","MEDGEN:541337","UMLS:C0268503"],"synonyms":[{"name":"AROA","type":"related"},{"name":"autosomal recessive ocular albinism","type":"exact"},{"name":"autosomal recessive ocular albinism (disease)","type":"exact"},{"name":"ocular albinism (disease), autosomal recessive","type":"exact"}],"termid":"MONDO:0040653","xrefs":{"Monarch":{"xref_id":"0040653"}}}


id: GO:0070199
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  {"annotated_genes":["SJAG_02761","SJAG_03540","SJAG_02336","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105836,102309,110231,120698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to a specific location on a chromosome.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome","termid":"GO:0034502"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01297":null,"SJAG_02336":null,"SJAG_02761":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to chromosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of protein localisation to chromosome","type":"exact"}],"termid":"GO:0070199","terms_by_termid":{"GO:0140210":null}}


id: MONDO:0003356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of leiomyosarcoma characterized by the presence of epithelioid round cells with eosinophilic to clear cytoplasm.","definition_xrefs":["NCIT:C3700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"epithelioid leiomyosarcoma","secondary_identifiers":["MEDGEN:61454","UMLS:C0205815","DOID:5264","ICDO:8891/3"],"synonyms":[{"name":"epithelioid leiomyosarcoma","type":"exact"}],"termid":"MONDO:0003356","xrefs":{"Monarch":{"xref_id":"0003356"}}}


id: PR:Q9US51
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mtf1 gene.","definition_xrefs":["UniProtKB:Q9US51","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial transcription factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.08c","synonyms":[{"name":"Spom972h-mtf1","type":"exact"}],"termid":"PR:Q9US51"}


id: PBO:0001345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor TFIIS","termid":"PBO:0001345"}


id: MONDO:0010651
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  {"annotated_genes":["SJAG_02399"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87275],"is_not":false,"summary":null,"term":"MONDO:0010651"}]},"cv_name":"mondo","definition":"A usually severe multisystemic disorder of copper metabolism, characterized by progressive neurodegeneration and marked connective tissue anomalies as well as typical sparse abnormal steely hair.","definition_xrefs":["Orphanet:565"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"disorder of pilosebaceous unit","termid":"MONDO:0002917"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic hair shaft abnormality (obsolete MONDO:0019282)","termid":"MONDO:0019282"},{"relation_name":"excluded_subClassOf","term_name":"obsolete eyebrow/eyelashes structural anomaly (obsolete MONDO:0020189)","termid":"MONDO:0020189"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inborn metal metabolism disorder","termid":"MONDO:0004689"},{"relation_name":"is_a","term_name":"disorder of copper metabolism","termid":"MONDO:0017762"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"Menkes disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D007706","icd11.foundation:986728180","MedDRA:10027294","MEDGEN:44030","SCTID:59178007","GARD:1521","OMIM:309400","NANDO:1200653","UMLS:C0022716","DOID:1838","ICD9:759.89","NCIT:C75486","NORD:1440","NANDO:2200580"],"synonyms":[{"name":"MD","type":"exact"},{"name":"MNK","type":"exact"},{"name":"Menkea syndrome","type":"related"},{"name":"Menkes disease","type":"exact"},{"name":"Menkes kinky hair syndrome","type":"exact"},{"name":"Menkes kinky-hair syndrome","type":"exact"},{"name":"Menkes syndrome","type":"exact"},{"name":"Mk","type":"exact"},{"name":"Trichopoliodystrophy","type":"exact"},{"name":"X-linked copper deficiency","type":"exact"},{"name":"copper transport disease","type":"broad"},{"name":"kinky hair disease","type":"exact"},{"name":"kinky hair syndrome","type":"exact"},{"name":"menkes disease, X-linked recessive","type":"exact"},{"name":"steely hair disease","type":"exact"},{"name":"steely hair syndrome","type":"exact"}],"termid":"MONDO:0010651","terms_by_termid":{"MONDO:0010651":null},"xrefs":{"Monarch":{"xref_id":"0010651"}}}


id: MONDO:0003558
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infrequent invasive carcinoma of the prostate gland characterized by the presence of both glandular and squamous neoplastic components. It is more often located in the transitional zone of the prostate gland and it tends to rapidly metastasize to the bones.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate squamous cell carcinoma","termid":"MONDO:0000993"},{"relation_name":"is_a","term_name":"adenosquamous carcinoma","termid":"MONDO:0006074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adenosquamous prostate carcinoma","secondary_identifiers":["DOID:5634","MEDGEN:233353","NCIT:C5538","UMLS:C1335503"],"synonyms":[{"name":"adenosquamous carcinoma of prostate","type":"exact"},{"name":"adenosquamous carcinoma of the prostate","type":"exact"},{"name":"prostate adenosquamous carcinoma","type":"exact"},{"name":"prostate gland adenosquamous carcinoma","type":"exact"}],"termid":"MONDO:0003558","xrefs":{"Monarch":{"xref_id":"0003558"}}}


id: PBO:0084845
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; homolog of human Bcl-2 interacting protein BMRP","termid":"PBO:0084845"}


id: GO:2001199
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dendritic cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte differentiation","termid":"GO:1902106"},{"relation_name":"is_a","term_name":"regulation of dendritic cell differentiation","termid":"GO:2001198"},{"relation_name":"negatively_regulates","term_name":"dendritic cell differentiation","termid":"GO:0097028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendritic cell differentiation","termid":"GO:2001199"}


id: GO:0046432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA, a derivative of coenzyme A.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA metabolic process","synonyms":[{"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA metabolism","type":"exact"}],"termid":"GO:0046432"}


id: FYPO:0006805
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a galactosyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal galactosyltransferase activity","termid":"FYPO:0006805"}


id: PBO:0077454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM183A pseudogene 4","termid":"PBO:0077454"}


id: PBO:0004921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp6 (predicted)","termid":"PBO:0004921"}


id: PBO:0053800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1055","termid":"PBO:0053800"}


id: GO:0010631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of an epithelial cell from one site to another, often during the development of a multicellular organism.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ameboidal-type cell migration","termid":"GO:0001667"},{"relation_name":"part_of","term_name":"epithelium migration","termid":"GO:0090132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell migration","termid":"GO:0010631"}


id: _global:complete_evidence_for_feature
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"B is complete_evidence_for_feature A if the extent (5' and 3' boundaries) and internal boundaries of B fully support the extent and internal boundaries of A.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"evidence_for_feature","termid":"_global:evidence_for_feature"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complete_evidence_for_feature","termid":"_global:complete_evidence_for_feature"}


id: FYPO:0006598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which phosphorylation of threonine at position 3 of histone H3 is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H3-T3 phosphorylation during vegetative growth","synonyms":[{"name":"decreased histone H3 phosphorylation at T3 during vegetative growth","type":"exact"},{"name":"decreased histone H3-T3 phosphorylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-pT3 during vegetative growth","type":"related"},{"name":"decreased histone H3T3 phosphorylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-T3 phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0006598"}


id: MONDO:0003612
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the uterine ligament.","definition_xrefs":["NCIT:C126498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system cancer","termid":"MONDO:0000637"},{"relation_name":"is_a","term_name":"cervical cancer","termid":"MONDO:0002974"},{"relation_name":"is_a","term_name":"uterine ligament neoplasm","termid":"MONDO:0021629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine ligament cancer","secondary_identifiers":["DOID:5727","MEDGEN:923070","UMLS:C0864950"],"synonyms":[{"name":"cancer of uterine ligament","type":"exact"},{"name":"malignant neoplasm of uterine ligament","type":"exact"},{"name":"malignant uterine ligament neoplasm","type":"exact"},{"name":"tumour of the uterine ligament","type":"related"},{"name":"uterine ligament cancer","type":"exact"}],"termid":"MONDO:0003612","xrefs":{"Monarch":{"xref_id":"0003612"}}}


id: GO:0042986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of amyloid precursor protein (APP), the precursor of amyloid-beta.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glycoprotein biosynthetic process","termid":"GO:0010560"},{"relation_name":"is_a","term_name":"regulation of amyloid precursor protein biosynthetic process","termid":"GO:0042984"},{"relation_name":"positively_regulates","term_name":"amyloid precursor protein biosynthetic process","termid":"GO:0042983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amyloid precursor protein biosynthetic process","synonyms":[{"name":"activation of amyloid precursor protein biosynthetic process","type":"narrow"},{"name":"positive regulation of APP biosynthesis","type":"exact"},{"name":"positive regulation of APP biosynthetic process","type":"exact"},{"name":"positive regulation of amyloid precursor protein anabolism","type":"exact"},{"name":"positive regulation of amyloid precursor protein biosynthesis","type":"exact"},{"name":"positive regulation of amyloid precursor protein formation","type":"exact"},{"name":"positive regulation of amyloid precursor protein synthesis","type":"exact"},{"name":"stimulation of amyloid precursor protein biosynthetic process","type":"narrow"},{"name":"up regulation of amyloid precursor protein biosynthetic process","type":"exact"},{"name":"up-regulation of amyloid precursor protein biosynthetic process","type":"exact"},{"name":"upregulation of amyloid precursor protein biosynthetic process","type":"exact"}],"termid":"GO:0042986"}


id: MONDO:0015128
data:
  {"annotated_genes":["SJAG_04270"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013310"}]},"cv_name":"mondo","definition":"A hormonal disorder that occurs when the adrenal glands fail to release adequate amounts of glucocorticoids (cortisol), mineralocorticoids (aldosterone, 11-deoxycorticosterone), and androgens (dehydroepiandrosterone) to meet physiologic needs, despite release of ACTH from the pituitary.","definition_xrefs":["NCIT:C113172"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"adrenocortical insufficiency","termid":"MONDO:0000004"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04270":null},"genotype_count":0,"is_obsolete":false,"name":"primary adrenal insufficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:854614","MedDRA:10052381","UMLS:C3887896","GARD:19802","Orphanet:101958"],"termid":"MONDO:0015128","terms_by_termid":{"MONDO:0013310":null},"xrefs":{"Monarch":{"xref_id":"0015128"}}}


id: GO:0014714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, taking place in the head, whereby the developmental fate of a cell becomes restricted such that it will develop into a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:mtg_muscle","CL:0000056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast fate commitment","termid":"GO:0048625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast fate commitment in head","termid":"GO:0014714"}


id: PBO:0001769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein, HSR1-related (predicted)","termid":"PBO:0001769"}


id: PBO:0084877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; null mutant does not grow on glycerol, is sensitive to 2,4-dichlorophenol, and accumulates large lipid droplets","termid":"PBO:0084877"}


id: MONDO:0007672
data:
  {"annotated_genes":["SJAG_02485"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87442],"is_not":false,"summary":null,"term":"MONDO:0007672"}]},"cv_name":"mondo","definition":"Glomuvenous malformations (GVMs) are hereditary vascular malformations characterized by the presence of small, multifocal bluish-purple venous lesions involving the skin.","definition_xrefs":["Orphanet:83454"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"glomangioma","termid":"MONDO:0002299"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"vascular malformation","termid":"MONDO:0024291"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02485":null},"genotype_count":0,"is_obsolete":false,"name":"glomuvenous malformation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:715644000","MedDRA:10018381","MESH:C536827","OMIM:138000","UMLS:C1841984","DOID:7996","icd11.foundation:2095305475","GARD:16728","MEDGEN:374834","NCIT:C5350"],"synonyms":[{"name":"GLOMUVENOUS malformations","type":"related"},{"name":"GVM","type":"related"},{"name":"VMGLOM","type":"exact"},{"name":"Venous malformations with glomus cells","type":"exact"},{"name":"familial glomangioma","type":"exact"},{"name":"glomangiomas, multiple","type":"related"},{"name":"glomangiomatosis","type":"related"},{"name":"glomus tumors, multiple","type":"related"},{"name":"glomuvenous malformation","type":"exact"},{"name":"hereditary glomangioma","type":"exact"},{"name":"hereditary multiple glomangiomas","type":"exact"},{"name":"multiple glomus tumors","type":"exact"},{"name":"multiple glomus tumours","type":"exact"}],"termid":"MONDO:0007672","terms_by_termid":{"MONDO:0007672":null},"xrefs":{"Monarch":{"xref_id":"0007672"}}}


id: MONDO:0000347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adult T-cell leukemia/lymphoma (obsolete MONDO:0000347)","termid":"MONDO:0000347","xrefs":{"Monarch":{"xref_id":"0000347"}}}


id: PBO:0058088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4305","termid":"PBO:0058088"}


id: PBO:0086821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YMR187C is not an essential gene","termid":"PBO:0086821"}


id: GO:0060464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a lung lobe from unspecified parts. This process begins with the specific processes that contribute to the appearance of the lobe and ends when the structural rudiment is recognizable. A lung lobe is a projection that extends from the lung.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"lung lobe morphogenesis","termid":"GO:0060463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung lobe formation","termid":"GO:0060464"}


id: MONDO:0006193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Simple or complex endometrial hyperplasia characterized by the absence of epithelial atypia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometrial hyperplasia without atypia","secondary_identifiers":["MEDGEN:274011","UMLS:C1516855","SCTID:134031000119108","ICD9:621.34","EFO:1000234","NCIT:C40157"],"synonyms":[{"name":"typical endometrial hyperplasia","type":"exact"}],"termid":"MONDO:0006193","xrefs":{"Monarch":{"xref_id":"0006193"}}}


id: PBO:0078591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 4, Y-linked","termid":"PBO:0078591"}


id: GO:0033302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving O-glucosylated derivatives of quercetin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"flavone metabolic process","termid":"GO:0051552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"quercetin O-glucoside metabolic process","synonyms":[{"name":"quercetin O-glucoside metabolism","type":"exact"}],"termid":"GO:0033302"}


id: PBO:0069196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 450, pseudogene","termid":"PBO:0069196"}


id: PBO:0060557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurobeachin pseudogene 1","termid":"PBO:0060557"}


id: GO:0071358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a type III interferon stimulus. Interferon lambda is the only member of the type III interferon found so far.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to type III interferon","termid":"GO:0034342"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to type III interferon","synonyms":[{"name":"cellular response to interferon-lambda","type":"narrow"},{"name":"cellular response to type III IFN","type":"exact"}],"termid":"GO:0071358"}


id: MONDO:0030984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 75","secondary_identifiers":["OMIM:619949","UMLS:C5677014","DOID:0070574","MEDGEN:1804291"],"synonyms":[{"name":"SPGF75","type":"exact"},{"name":"spermatogenic failure 75","type":"exact"}],"termid":"MONDO:0030984","xrefs":{"Monarch":{"xref_id":"0030984"}}}


id: GO:0000214
data:
  {"annotated_genes":["SJAG_04907","SJAG_00754","SJAG_03328","SJAG_01260"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61061,73220,75704,80747],"is_not":false,"summary":null,"term":"GO:0000214"}]},"cv_name":"cellular_component","definition":"A protein complex that catalyzes the endonucleolytic cleavage of pre-tRNA, producing 5'-hydroxyl and 2',3'-cyclic phosphate termini, and specifically removing the intron.","definition_xrefs":["PMID:22391451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"endoribonuclease complex","termid":"GO:1902555"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00754":null,"SJAG_01260":null,"SJAG_03328":null,"SJAG_04907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"tRNA-intron endonuclease complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"SEN complex","type":"exact"},{"name":"tRNA splicing endonuclease complex","type":"exact"}],"termid":"GO:0000214","terms_by_termid":{"GO:0000214":null}}


id: GO:0043009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the embryo over time, from zygote formation through a stage including a notochord and neural tube until birth or egg hatching.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryo development ending in birth or egg hatching","termid":"GO:0009792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chordate embryonic development","termid":"GO:0043009"}


id: PBO:0081420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 276","termid":"PBO:0081420"}


id: GO:0140978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mitochondrial large ribosomal subunit.","definition_xrefs":["PMID:28892042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosomal large subunit binding","termid":"GO:0043023"},{"relation_name":"is_a","term_name":"mitochondrial ribosome binding","termid":"GO:0097177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"mitochondrial large ribosomal subunit binding","synonyms":[{"name":"mitochondrial ribosomal large subunit binding","type":"exact"}],"termid":"GO:0140978"}


id: GO:0030668
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a dense granule of the type found in apicomplexan parasites.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule membrane","termid":"GO:0030667"},{"relation_name":"part_of","term_name":"apicomplexan dense granule","termid":"GO:0020026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"apicomplexan dense granule membrane","termid":"GO:0030668"}


id: GO:0051194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving a cofactor.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cofactor metabolic process (obsolete GO:0051194)","synonyms":[{"name":"activation of cofactor metabolic process","type":"narrow"},{"name":"positive regulation of cofactor metabolism","type":"exact"},{"name":"stimulation of cofactor metabolic process","type":"narrow"},{"name":"up regulation of cofactor metabolic process","type":"exact"},{"name":"up-regulation of cofactor metabolic process","type":"exact"},{"name":"upregulation of cofactor metabolic process","type":"exact"}],"termid":"GO:0051194"}


id: SO:0002184
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a sense intronic long non-coding RNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA_gene","termid":"SO:0002127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sense_intronic_lncRNA_gene","synonyms":[{"name":"sense intronic lncRNA gene","type":"exact"},{"name":"sense intronic ncRNA gene","type":"exact"},{"name":"sense_intronic_lncRNA_gene","type":"exact"}],"termid":"SO:0002184"}


id: GO:0006294
data:
  {"annotated_genes":["SJAG_01207"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110952],"is_not":false,"summary":null,"term":"GO:0006294"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins on DNA to form the multiprotein complex involved in damage recognition, DNA helix unwinding, and endonucleolytic cleavage at the site of DNA damage. This assembly occurs before the phosphodiester backbone of the damaged strand is cleaved 3' and 5' of the site of DNA damage.","definition_xrefs":["GOC:elh","PMID:10197977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"},{"relation_name":"part_of","term_name":"nucleotide-excision repair","termid":"GO:0006289"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0006281","GO:0044085","GO:0006259"],"is_obsolete":false,"name":"nucleotide-excision repair, preincision complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleotide-excision repair, preincision complex formation","type":"exact"}],"termid":"GO:0006294","terms_by_termid":{"GO:0006294":null}}


