# terms

id: GO:0060127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of a prolactin secreting cell. A prolactin secreting cell is an acidophilic cell of the anterior pituitary that produces prolactin.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"adenohypophysis development","termid":"GO:0021984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prolactin secreting cell differentiation","synonyms":[{"name":"epsilon-acidophil differentiation","type":"exact"},{"name":"lactotrope differentiation","type":"exact"},{"name":"lactotroph differentiation","type":"exact"},{"name":"lactotropic cell differentiation","type":"exact"},{"name":"mammotrope differentiation","type":"exact"},{"name":"mammotroph differentiation","type":"exact"},{"name":"mammotrophic cell differentiation","type":"exact"},{"name":"mammotropic cell differentiation","type":"exact"}],"termid":"GO:0060127"}


id: GO:0018549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methanethiol + O2 + H2O = formaldehyde + hydrogen sulfide + hydrogen peroxide.","definition_xrefs":["EC:1.8.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methanethiol oxidase activity","secondary_identifiers":["RHEA:11812","MetaCyc:METHANETHIOL-OXIDASE-RXN","UM-BBD_reactionID:r0209"],"synonyms":[{"name":"(MM)-oxidase activity","type":"related"},{"name":"MT-oxidase activity","type":"related"},{"name":"methanethiol:oxygen oxidoreductase activity","type":"related"},{"name":"methyl mercaptan oxidase activity","type":"related"},{"name":"methylmercaptan oxidase activity","type":"related"}],"termid":"GO:0018549"}


id: PBO:0081353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 175","termid":"PBO:0081353"}


id: MONDO:0008601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride storage disease","termid":"MONDO:0000155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561","MONDO:0002525"],"is_obsolete":false,"name":"triglyceride storage disease, type 1","secondary_identifiers":["MESH:C566031","OMIM:190420","UMLS:C1860821","MEDGEN:349897"],"synonyms":[{"name":"triglyceride storage disease, type I","type":"related"}],"termid":"MONDO:0008601","xrefs":{"Monarch":{"xref_id":"0008601"}}}


id: MONDO:0017232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Recessive intellectual disability-motor dysfunction-multiple joint contractures syndrome is a rare, genetic, syndromic intellectual disability disorder characterized by severe intellectual disability, progressive, postnatal, multiple joint contractures and severe motor dysfunction. Patients present arrest and regression of motor function and speech acquisition, as well as contractures which begin in lower limbs and slowly progress in an ascending manner to include spine and neck, resulting in individuals presenting a specific fixed position.","definition_xrefs":["Orphanet:280384"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recessive intellectual disability-motor dysfunction-multiple joint contractures syndrome","secondary_identifiers":["GARD:21083","MEDGEN:1659846","UMLS:C4749580"],"synonyms":[{"name":"IDMDC","type":"exact"}],"termid":"MONDO:0017232","xrefs":{"Monarch":{"xref_id":"0017232"}}}


id: GO:0010998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translation initiation in response to stress by the phosphorylation of eIF2 alpha.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translational initiation by eIF2 alpha phosphorylation","synonyms":[{"name":"eIF2 alpha phosphorylation in response to stress","type":"exact"},{"name":"regulation of translational initiation by eIF2 alpha phosphorylation in response to stress","type":"exact"}],"termid":"GO:0010998"}


id: PBO:0042109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 182","termid":"PBO:0042109"}


id: MONDO:0003998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An adenoma that arises from the vagina and is characterized by a tubular architectural pattern.","definition_xrefs":["NCIT:C40257"],"gene_count":0,"genotype_count":0,"name":"obsolete vaginal tubular adenoma (obsolete MONDO:0003998)","secondary_identifiers":["DOID:6809"],"synonyms":[{"name":"vaginal tubular adenoma","type":"exact"}],"termid":"MONDO:0003998","xrefs":{"Monarch":{"xref_id":"0003998"}}}


id: PBO:0064927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 6 regulatory subunit 1","termid":"PBO:0064927"}


id: GO:0005175
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CD27, a receptor found on the surface of T cells and some B cells and NK cells.","definition_xrefs":["GOC:jl","ISBN:0120781859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor necrosis factor receptor superfamily binding","termid":"GO:0032813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"CD27 receptor binding","termid":"GO:0005175"}


id: PBO:0051300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-37 (non-functional)","termid":"PBO:0051300"}


id: GO:0062107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to a non-growing cell tip.","definition_xrefs":["PMID:18328707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell tip","termid":"GO:1903066"},{"relation_name":"regulates","term_name":"protein localization to non-growing cell tip","termid":"GO:1902487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to non-growing cell tip","termid":"GO:0062107"}


id: PBO:0088598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell septum surface endo-1,3-beta-glucanase Eng1","termid":"PBO:0088598"}


id: MONDO:0013023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"orofacial cleft","termid":"MONDO:0000358"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orofacial cleft 12","secondary_identifiers":["UMLS:C2748505","DOID:0080405","MESH:C567548","MEDGEN:411596","OMIM:612858"],"synonyms":[{"name":"OFC12","type":"exact"},{"name":"cleft lip with or without cleft palate, nonsyndromic, 12","type":"related"},{"name":"orofacial cleft 12","type":"exact"}],"termid":"MONDO:0013023","xrefs":{"Monarch":{"xref_id":"0013023"}}}


id: GO:0000094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete septin assembly and septum formation (obsolete GO:0000094)","synonyms":[{"name":"septin assembly and septum formation","type":"exact"}],"termid":"GO:0000094"}


id: PBO:0091427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase","termid":"PBO:0091427"}


id: PBO:0060814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nebulette","termid":"PBO:0060814"}


id: MONDO:0004534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare variant of breast adenosis characterized by the proliferation of small round glands in a collagenous stroma. The epithelial cells are cuboidal and there are no myopepithelial cells present. There is no evidence of atypia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast adenosis","termid":"MONDO:0003725"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microglandular adenosis of breast","secondary_identifiers":["DOID:8335","MEDGEN:233705","UMLS:C1334753","NCIT:C5199"],"synonyms":[{"name":"breast microglandular adenosis","type":"exact"},{"name":"microglandular adenosis of the breast","type":"exact"}],"termid":"MONDO:0004534","xrefs":{"Monarch":{"xref_id":"0004534"}}}


id: PBO:0031659
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_pseudohyphal_growth","termid":"PBO:0031659"}


id: PBO:0082900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin-like protein that interacts with Pho85p; has sequence similarity to G1 cyclins PCL1 and PCL2","termid":"PBO:0082900"}


id: PBO:0080333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 97 pseudogene","termid":"PBO:0080333"}


id: PBO:0056961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 22","termid":"PBO:0056961"}


id: MONDO:1010988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus, non-human animal","termid":"MONDO:1010233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, horse","secondary_identifiers":["OMIA:000487-9796"],"termid":"MONDO:1010988","xrefs":{"Monarch":{"xref_id":"1010988"}}}


id: PBO:0111809
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin family","termid":"PBO:0111809"}


id: PBO:0117099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAS1 antisense RNA 1","termid":"PBO:0117099"}


id: MONDO:0016585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mansonelliasis (obsolete MONDO:0016585)","termid":"MONDO:0016585","xrefs":{"Monarch":{"xref_id":"0016585"}}}


id: MONDO:0013857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alar cleft, isolated","secondary_identifiers":["UMLS:C3553476","MEDGEN:766390","OMIM:614687"],"synonyms":[{"name":"alar cleft, isolated","type":"exact"}],"termid":"MONDO:0013857","xrefs":{"Monarch":{"xref_id":"0013857"}}}


id: MONDO:0859305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with eye movement abnormalities and ataxia","secondary_identifiers":["MEDGEN:1824014","OMIM:620094","DOID:0081275","UMLS:C5774241"],"termid":"MONDO:0859305","xrefs":{"Monarch":{"xref_id":"0859305"}}}


id: GO:0005934
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The end of a cellular bud distal to the site of attachment to the mother cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site of polarized growth","termid":"GO:0030427"},{"relation_name":"part_of","term_name":"cellular bud","termid":"GO:0005933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cellular bud tip","termid":"GO:0005934"}


id: PBO:0074562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 16","termid":"PBO:0074562"}


id: PBO:0049678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HADHA pseudogene 2","termid":"PBO:0049678"}


id: PBO:0062446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 111F pseudogene","termid":"PBO:0062446"}


id: GO:0051121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hepoxilins, a class of bioactive icosanoids with roles in the regulation of cell physiology.","definition_xrefs":["PMID:15123652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"hepoxilin metabolic process","secondary_identifiers":["Reactome:R-HSA-2142696"],"synonyms":[{"name":"hepoxilin metabolism","type":"exact"}],"termid":"GO:0051121"}


id: PBO:0089513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centaurin ADP ribosylation factor GTPase activating protein family","termid":"PBO:0089513"}


id: PR:O74449
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC16C4.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C4.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.04","synonyms":[{"name":"Spom972h-SPCC16C4.04","type":"exact"}],"termid":"PR:O74449"}


id: MONDO:0022577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A congenital malformation syndrome characterized by partial duplication of the left lower limb and aplasia of the ipsilateral kidney, plus other congenital malformations.","definition_xrefs":["PMID:3282726"],"gene_count":0,"genotype_count":0,"name":"obsolete Billet Bear syndrome (obsolete MONDO:0022577)","synonyms":[{"name":"lower limb partial duplication renal agenesis","type":"related"}],"termid":"MONDO:0022577","xrefs":{"Monarch":{"xref_id":"0022577"}}}


id: MONDO:0001786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine inflammatory disease","secondary_identifiers":["SCTID:28783002","EFO:0009572","ICD9:615.9","MEDGEN:541692","DOID:13736","UMLS:C0269047"],"synonyms":[{"name":"inflammatory disease of the uterus","type":"exact"}],"termid":"MONDO:0001786","xrefs":{"Monarch":{"xref_id":"0001786"}}}


id: MONDO:0005868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A laboratory test result indicating an abnormal amount of circulating nucleated red blood cells and immature red blood cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic aplastic anemia","termid":"MONDO:0012197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"myelophthisic anemia","secondary_identifiers":["SCTID:2694001","UMLS:C0002890","ICD9:285.8","DOID:2354","EFO:0007388","ICD10CM:D61.82","MEDGEN:1529","MESH:D000750","NCIT:C36218"],"synonyms":[{"name":"anaemia LEUKOERYTHROBLASTIC","type":"exact"},{"name":"anemia LEUKOERYTHROBLASTIC","type":"exact"},{"name":"anemia, leukoerythroblastic","type":"exact"},{"name":"leukoerythroblastic reaction","type":"exact"},{"name":"leukoerythroblastosis","type":"exact"},{"name":"myelophthisis","type":"related"}],"termid":"MONDO:0005868","xrefs":{"Monarch":{"xref_id":"0005868"}}}


id: GO:0032565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to dGMP, deoxyguanosine monophosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl deoxyribonucleotide binding","termid":"GO:0032560"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"dGMP binding","termid":"GO:0032565"}


id: MONDO:0800179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infection of the joint that is a complication occurring in 1% to 2% of primary arthroplasties.","definition_xrefs":["PMID:33380199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial arthritis","termid":"MONDO:0004471"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periprosthetic joint infection","termid":"MONDO:0800179","xrefs":{"Monarch":{"xref_id":"0800179"}}}


id: PBO:0074763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 1A","termid":"PBO:0074763"}


id: MONDO:0009871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pili torti-developmental delay-neurological abnormalities syndrome is characterized by growth and developmental delay, mild to moderate neurologic abnormalities, and pili torti. It has been described in a brother and his sister born to consanguineous Puerto Rican parents.","definition_xrefs":["Orphanet:2891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pili torti-developmental delay-neurological abnormalities syndrome","secondary_identifiers":["MESH:C537398","UMLS:C1849811","GARD:4362","OMIM:261990","MEDGEN:342358"],"synonyms":[{"name":"abnormal hair, joint laxity, and developmental delay","type":"exact"},{"name":"pili torti and developmental delay","type":"related"},{"name":"pili torti developmental delay neurological abnormalities","type":"related"}],"termid":"MONDO:0009871","xrefs":{"Monarch":{"xref_id":"0009871"}}}


id: MONDO:0012839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pyogenic bacterial infection due to MyD88 deficiency is a primary immunodeficiency characterized by increased susceptibility to pyogenic bacterial infections, including invasive pneumococcal, invasive staphylococcal and pseudomonas disease.","definition_xrefs":["Orphanet:183713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"pyogenic bacterial infections due to MyD88 deficiency","secondary_identifiers":["icd11.foundation:444523526","NANDO:2200763","OMIM:612260","UMLS:C2677092","MESH:C567379","NANDO:1200362","GARD:12638","MEDGEN:383023"],"synonyms":[{"name":"MYD88D","type":"exact"},{"name":"MyD88 deficiency","type":"exact"},{"name":"immunodeficiency 68","type":"exact"},{"name":"pyogenic bacterial infections, recurrent, due to MyD88 deficiency","type":"exact"},{"name":"recurrent pyogenic bacterial infections due to MyD88 deficiency","type":"exact"}],"termid":"MONDO:0012839","xrefs":{"Monarch":{"xref_id":"0012839"}}}


id: PBO:0075853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX2IP pseudogene 1","termid":"PBO:0075853"}


id: PBO:0028176
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_Golgi_membrane","termid":"PBO:0028176"}


id: FYPO:0008169
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, and structure of actin cables are normal during mitotic interphase (i.e. indistinguishable from wild type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cable morphology","termid":"FYPO:0002487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal actin cable morphology during mitotic interphase","termid":"FYPO:0008169"}


id: MONDO:0016248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of ovarian cancer that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited gynecological tumor (obsolete MONDO:0015981)","termid":"MONDO:0015981"},{"relation_name":"excluded_subClassOf","term_name":"malignant non-epithelial tumor of ovary","termid":"MONDO:0018365"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"ovarian cancer","termid":"MONDO:0008170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"familial ovarian cancer","secondary_identifiers":["UMLS:C5679802","icd11.foundation:1484739866","GARD:20467","Orphanet:213517","MEDGEN:1803368"],"synonyms":[{"name":"familial ovarian cancer","type":"exact"},{"name":"familial ovarian malignant tumor","type":"exact"},{"name":"familial ovarian malignant tumour","type":"exact"},{"name":"hereditary ovarian cancer","type":"exact"}],"termid":"MONDO:0016248","xrefs":{"Monarch":{"xref_id":"0016248"}}}


id: PBO:0081532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 442","termid":"PBO:0081532"}


id: PBO:0073658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN3 transcription regulator family member A","termid":"PBO:0073658"}


id: _global:symbiotically_interacts_with
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A biotic interaction in which the two organisms live together in more or less intimate association.","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in_a_biotic-biotic_interaction_with","termid":"_global:participates_in_a_biotic-biotic_interaction_with"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symbiotically_interacts_with","secondary_identifiers":["RO:0002440"],"termid":"_global:symbiotically_interacts_with"}


id: PBO:0072472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 1","termid":"PBO:0072472"}


id: PBO:0090750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial metalloendopeptidase","termid":"PBO:0090750"}


id: PBO:0067819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 121","termid":"PBO:0067819"}


id: SO:0001342
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Isowyosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isowyosine","secondary_identifiers":["RNAMOD:101"],"synonyms":[{"name":"imG2","type":"exact"}],"termid":"SO:0001342"}


id: MONDO:0016982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor arising from the endothelial cells of the blood vessels. Microscopically, it is characterized by frequently open vascular anastomosing and branching channels. The malignant cells that line the vascular channels are spindle or epithelioid and often display hyperchromatic nuclei. Angiosarcomas most frequently occur in the skin and breast. Patients with long-standing lymphedema are at increased risk of developing angiosarcoma.","definition_xrefs":["NCIT:C3088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular cancer","termid":"MONDO:0002095"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"angiosarcoma","secondary_identifiers":["MedDRA:10002476","GARD:20900","MEDGEN:42385","MESH:D006394","ICD9:171.9","ONCOTREE:ANGS","HP:0200058","Orphanet:263413","UMLS:C0018923","SCTID:403977003","ICDO:9120/3","EFO:0003968","DOID:0001816"],"synonyms":[{"name":"angiosarcoma","type":"exact"},{"name":"angiosarcoma (disease)","type":"exact"},{"name":"blood vessel sarcoma","type":"exact"},{"name":"hemangiosarcoma","type":"exact"},{"name":"hemangiosarcoma, malignant","type":"exact"},{"name":"malignant angioendothelioma","type":"exact"},{"name":"malignant hemangioendothelioma","type":"exact"},{"name":"sarcoma of blood vessel","type":"exact"},{"name":"vascular sarcoma","type":"exact"}],"termid":"MONDO:0016982","xrefs":{"Monarch":{"xref_id":"0016982"}}}


id: PBO:0044442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 11","termid":"PBO:0044442"}


id: FYPO:0004646
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the duration of anaphase of mitosis normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle phase","termid":"FYPO:0002740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal duration of mitotic anaphase","synonyms":[{"name":"normal duration of anaphase during mitotic cell cycle","type":"exact"},{"name":"normal duration of anaphase of mitosis","type":"related"},{"name":"normal duration of mitotic anaphase during vegetative growth","type":"exact"}],"termid":"FYPO:0004646"}


id: MONDO:0001981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cholesterol ester storage disease (obsolete MONDO:0001981)","termid":"MONDO:0001981","xrefs":{"Monarch":{"xref_id":"0001981"}}}


id: FYPO:0001556
data:
  {"alleles_by_uniquename":{"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121567,121568,121571,121575,121580,121583],"is_not":false,"summary":null,"term":"FYPO:0001556"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more nuclear envelope than normal. Excess nuclear envelopes may take the form of intranuclear membrane stacks or invaginations, or small cytoplasmic spheres that are attached to the nucleus, have double lipid bilayer membranes, and may contain structures resembling nuclear pores.","definition_xrefs":["PomBase:mah","PMID:22156749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01906":null,"SJAG_02763":null,"SJAG_03940":null},"genotype_count":6,"genotypes_by_uniquename":{"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0002403"],"is_obsolete":false,"name":"excess nuclear envelope present","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_03940","SJAG_02763","SJAG_01906"],"single_locus_genotype_uniquenames":["nem1delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1delta","nem2delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"excess nuclear envelope present during mitotic cell cycle","type":"related"},{"name":"excess nuclear envelope present during vegetative growth","type":"exact"},{"name":"increased nuclear envelope proliferation","type":"related"},{"name":"nuclear envelope present in greater amount","type":"exact"}],"termid":"FYPO:0001556","terms_by_termid":{"FYPO:0001556":null,"FYPO_EXT:0000001":null}}


id: MONDO:0019111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial thrombocytosis is a type of thrombocytosis, a sustained elevation of platelet numbers, which affects the platelet/megakaryocyte lineage and may create a tendency for thrombosis and hemorrhage but does not cause myeloproliferation.","definition_xrefs":["Orphanet:71493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombocytosis disease","termid":"MONDO:0002249"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"familial thrombocytosis","secondary_identifiers":["SCTID:720950009","UMLS:C4303761","icd11.foundation:1695088249","GARD:16688","MEDGEN:929430","OMIMPS:187950"],"synonyms":[{"name":"THCYT","type":"exact"},{"name":"familial thrombocythemia","type":"exact"},{"name":"hereditary thrombocythemia","type":"exact"},{"name":"hereditary thrombocytosis","type":"exact"},{"name":"hereditary thrombocytosis disease","type":"exact"},{"name":"thrombocythemia","type":"related"}],"termid":"MONDO:0019111","xrefs":{"Monarch":{"xref_id":"0019111"}}}


id: _global:positively_regulates
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p positively regulates q iff p regulates q, and p increases the rate or magnitude of execution of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of,_positive_effect","termid":"_global:causally_upstream_of,_positive_effect"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"regulates","termid":"_global:regulates"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positively_regulates","secondary_identifiers":["RO:0002213"],"termid":"_global:positively_regulates"}


id: PBO:0076463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking regulator and scaffold protein tamalin","termid":"PBO:0076463"}


id: GO:1903607
data:
  {"annotated_genes":["SJAG_03199","SJAG_04008"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96328,109439],"is_not":false,"summary":null,"term":"GO:1903607"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cytochrome c.","definition_xrefs":["PMID:19721088","GOC:TermGenie","GOC:dph","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome biosynthetic process","termid":"GO:1903605"},{"relation_name":"is_a","term_name":"cytochrome c metabolic process","termid":"GO:1903606"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03199":null,"SJAG_04008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytochrome c biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytochrome c anabolism","type":"exact"},{"name":"cytochrome c biosynthesis","type":"exact"},{"name":"cytochrome c formation","type":"exact"},{"name":"cytochrome c synthesis","type":"exact"}],"termid":"GO:1903607","terms_by_termid":{"GO:1903607":null}}


id: PBO:0039520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B pseudogene 1","termid":"PBO:0039520"}


id: PBO:0034754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome co-factor Txc1","termid":"PBO:0034754"}


id: PBO:0049101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 158","termid":"PBO:0049101"}


id: PBO:0036304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg11","termid":"PBO:0036304"}


id: MONDO:0001763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the ethmoid sinus.","direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus carcinoma","termid":"MONDO:0000380"},{"relation_name":"is_a","term_name":"ethmoidal sinus neoplasm","termid":"MONDO:0001764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ethmoid sinus cancer","secondary_identifiers":["ICD9:160.3","UMLS:C0153477","DOID:1363","ICD10CM:C31.1","MEDGEN:102272","NCIT:C3541","SCTID:363426009"],"synonyms":[{"name":"cancer of ethmoid sinus","type":"exact"},{"name":"ethmoid sinus cancer","type":"exact"},{"name":"malignant ethmoid sinus neoplasm","type":"exact"},{"name":"malignant ethmoid sinus tumor","type":"exact"},{"name":"malignant ethmoid sinus tumour","type":"exact"},{"name":"malignant ethmoidal sinus neoplasm","type":"exact"},{"name":"malignant ethmoidal sinus tumor","type":"exact"},{"name":"malignant ethmoidal sinus tumour","type":"exact"},{"name":"malignant neoplasm of ethmoid sinus","type":"exact"},{"name":"malignant neoplasm of ethmoidal sinus","type":"exact"},{"name":"malignant neoplasm of the ethmoid sinus","type":"exact"},{"name":"malignant neoplasm of the ethmoidal sinus","type":"exact"},{"name":"malignant tumor of ethmoid sinus","type":"exact"},{"name":"malignant tumor of ethmoidal sinus","type":"exact"},{"name":"malignant tumor of the ethmoid sinus","type":"exact"},{"name":"malignant tumor of the ethmoidal sinus","type":"exact"},{"name":"malignant tumour of ethmoid sinus","type":"exact"},{"name":"malignant tumour of ethmoidal sinus","type":"exact"},{"name":"malignant tumour of the ethmoid sinus","type":"exact"},{"name":"malignant tumour of the ethmoidal sinus","type":"exact"}],"termid":"MONDO:0001763","xrefs":{"Monarch":{"xref_id":"0001763"}}}


id: PBO:0047842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folylpolyglutamate synthase","termid":"PBO:0047842"}


id: MONDO:0009531
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lip prints (obsolete MONDO:0009531)","secondary_identifiers":["OMIM:247150"],"synonyms":[{"name":"lip prints","type":"exact"}],"termid":"MONDO:0009531","xrefs":{"Monarch":{"xref_id":"0009531"}}}


id: SO:0000144
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000144 primary_transcript_attribute (obsolete SO:0000144)","termid":"SO:0000144"}


id: MOD:01291
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00464. Remap to MOD:00464.","definition_xrefs":["PubMed:12686488","PubMed:6273432","PubMed:9252331","Unimod:425","PubMed:12643539"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01291 dihydroxylated residue - site W (obsolete MOD:01291)","synonyms":[{"name":"Dioxidation","type":"related"},{"name":"dihydroxy","type":"related"}],"termid":"MOD:01291"}


id: PBO:0066090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS p21 protein activator 3","termid":"PBO:0066090"}


id: SO:0000237
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a transcript.","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_attribute","synonyms":[{"name":"transcript attribute","type":"exact"}],"termid":"SO:0000237"}


id: MONDO:0019520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A lymphedema that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic lymphedema (obsolete MONDO:0019520)","secondary_identifiers":["Orphanet:89832"],"synonyms":[{"name":"syndrome associated with lymphedema","type":"exact"},{"name":"syndromic lymphedema","type":"exact"}],"termid":"MONDO:0019520","xrefs":{"Monarch":{"xref_id":"0019520"}}}


id: MONDO:0007183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"azotemia, familial","secondary_identifiers":["MESH:C566233","OMIM:109160","MEDGEN:400033","UMLS:C1862358"],"synonyms":[{"name":"azotemia, familial","type":"exact"}],"termid":"MONDO:0007183","xrefs":{"Monarch":{"xref_id":"0007183"}}}


id: MONDO:0005842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic inflammatory process affecting the mucous membrane of the maxillary sinus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sinusitis","termid":"MONDO:0005961"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maxillary sinusitis","secondary_identifiers":["UMLS:C0024959","DOID:2051","NCIT:C34809","SCTID:88348008","EFO:0007361","MESH:D015523","MEDGEN:44313"],"termid":"MONDO:0005842","xrefs":{"Monarch":{"xref_id":"0005842"}}}


id: MONDO:0011362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive muscular dystrophy","termid":"MONDO:0016106"},{"relation_name":"is_a","term_name":"autosomal dominant distal myopathy","termid":"MONDO:0016108"},{"relation_name":"is_a","term_name":"hereditary inclusion-body myopathy","termid":"MONDO:0016112"},{"relation_name":"is_a","term_name":"autosomal dominant titinopathy","termid":"MONDO:0100494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320","MONDO:0000426"],"is_obsolete":false,"name":"myopathy, myofibrillar, 9, with early respiratory failure","secondary_identifiers":["Orphanet:178464","MESH:C564377","OMIM:607569","SCTID:733490006","UMLS:C1863599","GARD:12591","MESH:C566343","MEDGEN:350930","Orphanet:34521","OMIM:603689","DOID:0111188","SCTID:702373006"],"synonyms":[{"name":"ADMERF","type":"exact"},{"name":"Edstrom myopathy","type":"exact"},{"name":"Edström myopathy","type":"exact"},{"name":"HIBM-ERF","type":"exact"},{"name":"HMERF","type":"exact"},{"name":"HMERF-ERF","type":"exact"},{"name":"distal myopathy with early respiratory muscle involvement","type":"exact"},{"name":"hereditary inclusion body myopathy with early respiratory failure","type":"exact"},{"name":"hereditary proximal myopathy with early respiratory failure","type":"exact"},{"name":"myofibrillar myopathy with early respiratory failure","type":"exact"},{"name":"myopathy, distal, with early respiratory failure, autosomal dominant","type":"exact"},{"name":"myopathy, proximal, with early respiratory muscle involvement","type":"exact"}],"termid":"MONDO:0011362","xrefs":{"Monarch":{"xref_id":"0011362"}}}


id: GO:0141061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of a cell of another organism, leading to damage or temporary subversion of that cell.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of anatomical structure in another organism","termid":"GO:0141060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"disruption of cell in another organism","termid":"GO:0141061"}


id: GO:0000031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-mannose + n {[alpha-D-Man-(1->2)-alpha-D-Man-(1->2)]-alpha-D-Man-(1->6)}60-(Man9GlcNAc2-[protein] = phosphorylated {[alpha-D-Man-(1->2)-alpha-D-Man-(1->2)]-alpha-D-Man-(1->6)}60-(Man9GlcNAc2-[protein] + n GMP + n H+ or GDP-alpha-D-mannose + alpha-D-Man-(1->3)-alpha-D-Man-(1->3)-alpha-D-Man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-3-O-(Ser/Thr)-[protein] = alpha-D-Man-(1->3)-alpha-D-Man-(1->3)-[alpha-D-Man-6P-]-alpha-D-Man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-3-O-(Ser/Thr)-[protein] + GMP + H+.","definition_xrefs":["MetaCyc:RXN-22693","MetaCyc:RXN-22694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"mannosylphosphate transferase activity","termid":"GO:0000031"}


id: PBO:0031144
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_wall_beta-glucan_level","termid":"PBO:0031144"}


id: PBO:0011458
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Changed Amiloride Resistance","termid":"PBO:0011458"}


id: GO:0047307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2,4-diaminobutyrate + pyruvate = L-alanine + L-aspartate 4-semialdehyde.","definition_xrefs":["EC:2.6.1.46","RHEA:12380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016769","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"diaminobutyrate-pyruvate transaminase activity","secondary_identifiers":["MetaCyc:2.6.1.46-RXN","KEGG_REACTION:R02293"],"synonyms":[{"name":"L-2,4-diaminobutanoate:pyruvate aminotransferase activity","type":"related"},{"name":"L-diaminobutyric acid transaminase activity","type":"related"},{"name":"diaminobutyrate--pyruvate aminotransferase activity","type":"related"},{"name":"diaminobutyrate-pyruvate aminotransferase activity","type":"exact"}],"termid":"GO:0047307"}


id: GO:0047243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a flavanone + UDP-D-glucose = a flavanone 7-O-beta-D-glucoside + UDP.","definition_xrefs":["MetaCyc:2.4.1.185-RXN","EC:2.4.1.185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"flavanone 7-O-beta-glucosyltransferase activity","synonyms":[{"name":"UDP-glucose:flavanone 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:flavanone 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"hesperetin 7-O-glucosyl-transferase activity","type":"related"},{"name":"naringenin 7-O-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-flavanone 7-O-glucosyltransferase activity","type":"related"}],"termid":"GO:0047243"}


id: GO:0035922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the foramen ovale closes after birth, to prevent blood flow between the right and left atria. In the fetal heart, the foramen ovale allows blood to enter the left atrium from the right atrium. Closure of the foramen ovale after birth stops this blood flow.","definition_xrefs":["GOC:vk","PMID:19762328","Wikipedia:Foramen_ovale_(heart)","GOC:BHF","UBERON:0004754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"cardiac septum morphogenesis","termid":"GO:0060411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"foramen ovale closure","synonyms":[{"name":"foramen ovale of heart closure","type":"exact"}],"termid":"GO:0035922"}


id: PBO:0078440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 6-1","termid":"PBO:0078440"}


id: MONDO:0016669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic hemoglobinopathy characterized by anemia, reticulocytosis and erythrocyte abnormalities including target cells, irreversibly sickled cells and crystal-containing cells. Clinical course is similar to sickle cell disease, but less severe and with less complications. Signs and symptoms may include acute episodes of pain, splenic infarction and splenic sequestration crisis, acute chest syndrome, focal segmental glomerulosclerosis, ischemic brain injury, peripheral retinopathy, and osteonecrosis.","definition_xrefs":["Orphanet:251365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"sickle cell disease","termid":"MONDO:0011382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0006025"],"is_obsolete":false,"name":"sickle cell-hemoglobin c disease syndrome","secondary_identifiers":["MedDRA:10057072","UMLS:C0019034","GARD:6584","MEDGEN:5496"],"synonyms":[{"name":"HbSC disease","type":"exact"},{"name":"sickle cell - haemoglobin C disease","type":"related"},{"name":"sickle cell - hemoglobin C disease","type":"related"}],"termid":"MONDO:0016669","xrefs":{"Monarch":{"xref_id":"0016669"}}}


id: MONDO:0019893
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal monosomy 19p13.3 is a rare chromosomal anomaly associated with a wide range of phenotypic features depending on the size of the deletion. It may present with intrauterine growth retardation, failure to thrive, global developmental delay, dysmorphic features (such as broad forehead, midface retrusion, broad nasal bridge, micrognathia, smooth philtrum, low-set, dysplastic ears), congenital anomalies (such as atrial septal defect, gastrointestinal anomalies, renal and urogenital malformations, agenesis of the corpus callosum) and other clinical features (such as hearing loss, visual impairment and immune dysregulation).","definition_xrefs":["Orphanet:96129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 19","termid":"MONDO:0016897"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal monosomy 19p13.3","secondary_identifiers":["MEDGEN:1665859","GARD:19326","UMLS:C4749277"],"synonyms":[{"name":"distal deletion 19p","type":"exact"},{"name":"telomeric deletion 19p","type":"exact"}],"termid":"MONDO:0019893","xrefs":{"Monarch":{"xref_id":"0019893"}}}


id: FYPO:0003665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of RNA pyrophosphohydrolase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal RNA pyrophosphohydrolase activity","termid":"FYPO:0003665"}


id: PBO:0074402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 10 like 1","termid":"PBO:0074402"}


id: SO:0000183
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of the gene which is not transcribed.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_component_region","termid":"SO:0000842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_transcribed_region","synonyms":[{"name":"non transcribed region","type":"exact"},{"name":"non-transcribed sequence","type":"exact"},{"name":"nontranscribed region","type":"exact"},{"name":"nontranscribed sequence","type":"exact"}],"termid":"SO:0000183"}


id: GO:0120534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylyl sulfate + dermatan = adenosine 3',5'-bisphosphate + dermatan sulfate.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan sulfotransferase activity","termid":"GO:0050698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016782","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"dermatan sulfotransferase activity","termid":"GO:0120534"}


id: GO:0070830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a tight junction, an occluding cell-cell junction that is composed of a branching network of sealing strands that completely encircles the apical end of each cell in an epithelial sheet.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tight junction assembly","termid":"GO:0120192"},{"relation_name":"part_of","term_name":"apical junction assembly","termid":"GO:0043297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"bicellular tight junction assembly","secondary_identifiers":["Reactome:R-HSA-420029"],"synonyms":[{"name":"tight junction formation","type":"exact"}],"termid":"GO:0070830"}


id: MONDO:0017392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pre-Descemet corneal dystrophy (PDCD) is a rare form of stromal corneal dystrophy characterized by focal, fine, gray opacities in the deep stroma immediately anterior to the Descemet membrane, with no effect on vision.","definition_xrefs":["Orphanet:293462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stromal corneal dystrophy","termid":"MONDO:0020213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"pre-descemet corneal dystrophy","secondary_identifiers":["UMLS:C0339282","icd11.foundation:2027634766","GARD:21168","ICD9:371.56","MEDGEN:573065","SCTID:231934009"],"synonyms":[{"name":"PDCD","type":"exact"}],"termid":"MONDO:0017392","xrefs":{"Monarch":{"xref_id":"0017392"}}}


id: PBO:0064196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A and acyltransferase 4","termid":"PBO:0064196"}


id: GO:0031040
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded organelle of ciliated protozoan cells that contains a diploid copy of the cell's complete genome. Sections of contiguous sequence in the macronucleus are often interrupted by internal eliminated sequences (IES), and may be permuted, in micronuclei. Genic transcription is not found in micronuclei. Some ciliate species may contain multiple micronuclei per cell.","definition_xrefs":["GOC:ns"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"micronucleus","secondary_identifiers":["Wikipedia:Micronucleus"],"termid":"GO:0031040"}


id: PBO:0091109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIC subunit Sfc7","termid":"PBO:0091109"}


id: GO:0070471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the uterus. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The uterus is a muscular organ of the female mammal for containing and usually for nourishing the young during development prior to birth.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uterine smooth muscle contraction","synonyms":[{"name":"myometrial contraction","type":"exact"},{"name":"myometrial smooth muscle contraction","type":"exact"},{"name":"myometrium contraction","type":"exact"}],"termid":"GO:0070471"}


id: MONDO:0020378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cataract 16 multiple types","termid":"MONDO:0013411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"early-onset posterior polar cataract","secondary_identifiers":["GARD:16889","MEDGEN:163646","Orphanet:98993","UMLS:C0858617"],"termid":"MONDO:0020378","xrefs":{"Monarch":{"xref_id":"0020378"}}}


id: GO:1901935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-caryophyllene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene metabolic process","termid":"GO:0051761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"beta-caryophyllene metabolic process","synonyms":[{"name":"beta-caryophyllene metabolism","type":"exact"}],"termid":"GO:1901935"}


id: SO:0001502
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An experimental feature with high sequence identity to another sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high_identity_region","synonyms":[{"name":"high identity region","type":"exact"}],"termid":"SO:0001502"}


id: PBO:0109126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basonuclin zinc finger protein 2","termid":"PBO:0109126"}


id: PBO:0082575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin synthase III; catalyzes the transfer of N-acetylglucosamine (GlcNAc) to chitin; required for synthesis of the majority of cell wall chitin, the chitin ring during bud emergence, and spore wall chitosan; contains overlapping di-leucine and di-acidic signals that mediate, respectively, intracellular trafficking by AP-1 and trafficking to plasma membrane by exomer complex; requires AP-3 complex for its intracellular retention","termid":"PBO:0082575"}


id: PBO:0073986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 1","termid":"PBO:0073986"}


id: GO:0002889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of an immunoglobulin mediated immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell mediated immunity","termid":"GO:0002712"},{"relation_name":"regulates","term_name":"immunoglobulin mediated immune response","termid":"GO:0016064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of immunoglobulin mediated immune response","termid":"GO:0002889"}


id: GO:0018615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-indanone + NADPH + 1/2 O2 = NADP+ + 3-isochromanone.","definition_xrefs":["UM-BBD_reactionID:r0424"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-indanone monooxygenase activity (obsolete GO:0018615)","termid":"GO:0018615"}


id: PBO:0030309
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nucleus_localization","termid":"PBO:0030309"}


id: GO:0003848
data:
  {"annotated_genes":["SJAG_00815"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70641],"is_not":false,"summary":null,"term":"GO:0003848"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine + ATP = (2-amino-4-hydroxy-7,8-dihydropteridin-6-yl)methyl diphosphate + AMP + 2 H+.","definition_xrefs":["EC:2.7.6.3","RHEA:11412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphotransferase activity","termid":"GO:0016778"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00815":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["KEGG_REACTION:R03503","MetaCyc:H2PTERIDINEPYROPHOSPHOKIN-RXN"],"synonyms":[{"name":"2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase activity","type":"exact"},{"name":"6-hydroxymethyl-7,8-dihydropterin diphosphokinase activity","type":"related"},{"name":"6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase activity","type":"related"},{"name":"7,8-dihydro-6-hydroxymethylpterin diphosphokinase activity","type":"related"},{"name":"7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase activity","type":"related"},{"name":"7,8-dihydroxymethylpterin-pyrophosphokinase activity","type":"related"},{"name":"ATP:2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine 6'-diphosphotransferase activity","type":"related"},{"name":"H2-pteridine-CH2OH pyrophosphokinase activity","type":"related"},{"name":"HPPK","type":"related"},{"name":"hydroxymethyldihydropteridine pyrophosphokinase activity","type":"related"}],"termid":"GO:0003848","terms_by_termid":{"GO:0003848":null}}


id: PR:O14239
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rax2 gene.","definition_xrefs":["UniProtKB:O14239","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polarized growth protein rax2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.06c","synonyms":[{"name":"Spom972h-rax2","type":"exact"},{"name":"revert to axial protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14239"}


id: MOD:00827
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-tyrosine residue and an L-cysteine residue by a thioester bond to form S-(L-tyrosyl)-L-cysteine.","definition_xrefs":["RESID:AA0416","PubMed:11807079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(L-tyrosyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S)-2-amino-3-(4-hydroxyphenyl)propanoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"CROSSLNK Tyrosyl cysteine thioester (Cys-Tyr)","type":"exact"},{"name":"S-(L-tyrosyl)-L-cysteine","type":"exact"},{"name":"S-[2-amino-3-(4-hydoxyphenyl)propanoyl]cysteine","type":"exact"},{"name":"XLNK1TyrSCys","type":"exact"},{"name":"tyrosine cysteine thioester","type":"exact"}],"termid":"MOD:00827"}


id: PBO:0062101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily B member 1","termid":"PBO:0062101"}


id: PBO:0029869
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_trimethylation","termid":"PBO:0029869"}


id: GO:0060672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs when a trophoblast cell elongates to contribute to the branching of the placenta.","definition_xrefs":["GOC:dph","GOC:tb","PMID:16916377","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell morphogenesis","termid":"GO:0003382"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"branching involved in labyrinthine layer morphogenesis","termid":"GO:0060670"},{"relation_name":"part_of","term_name":"epithelial cell differentiation involved in embryonic placenta development","termid":"GO:0060671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell morphogenesis involved in placental branching","termid":"GO:0060672"}


id: GO:1902915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein polyubiquitination.","definition_xrefs":["GO_REF:0000058","GOC:di","GOC:TermGenie","PMID:23645667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein ubiquitination","termid":"GO:0031397"},{"relation_name":"is_a","term_name":"regulation of protein polyubiquitination","termid":"GO:1902914"},{"relation_name":"negatively_regulates","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein polyubiquitination","synonyms":[{"name":"down regulation of polyubiquitin","type":"related"},{"name":"down regulation of protein polyubiquitination","type":"exact"},{"name":"down regulation of protein polyubiquitinylation","type":"exact"},{"name":"down regulation of protein polyubiquitylation","type":"exact"},{"name":"down-regulation of polyubiquitin","type":"related"},{"name":"down-regulation of protein polyubiquitination","type":"exact"},{"name":"down-regulation of protein polyubiquitinylation","type":"exact"},{"name":"down-regulation of protein polyubiquitylation","type":"exact"},{"name":"downregulation of polyubiquitin","type":"related"},{"name":"downregulation of protein polyubiquitination","type":"exact"},{"name":"downregulation of protein polyubiquitinylation","type":"exact"},{"name":"downregulation of protein polyubiquitylation","type":"exact"},{"name":"inhibition of polyubiquitin","type":"related"},{"name":"inhibition of protein polyubiquitination","type":"narrow"},{"name":"inhibition of protein polyubiquitinylation","type":"narrow"},{"name":"inhibition of protein polyubiquitylation","type":"narrow"},{"name":"negative regulation of polyubiquitin","type":"related"},{"name":"negative regulation of protein polyubiquitinylation","type":"exact"},{"name":"negative regulation of protein polyubiquitylation","type":"exact"}],"termid":"GO:1902915"}


id: MONDO:0100292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Carey-Fineman-Ziter syndrome in which the cause of the disease is a mutation in the MYMX gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Carey-Fineman-Ziter syndrome","termid":"MONDO:0031415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Carey-Fineman-Ziter syndrome 2","secondary_identifiers":["MEDGEN:1800921","OMIM:619941","UMLS:C5677012"],"synonyms":[{"name":"CFZS2","type":"exact"}],"termid":"MONDO:0100292","xrefs":{"Monarch":{"xref_id":"0100292"}}}


id: FYPO:0007573
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction begins earlier than normal and the rate, or speed, of ring contraction is increased.","definition_xrefs":["PMID:25451933","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"premature actomyosin contractile ring contraction","termid":"FYPO:0004430"},{"relation_name":"has_part","term_name":"increased rate of actomyosin contractile ring contraction","termid":"FYPO:0006897"},{"relation_name":"is_a","term_name":"premature actomyosin contractile ring contraction","termid":"FYPO:0004430"},{"relation_name":"is_a","term_name":"increased rate of actomyosin contractile ring contraction","termid":"FYPO:0006897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0004803","FYPO:0000032","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"premature actomyosin contractile ring contraction with increased contraction rate","synonyms":[{"name":"advanced actomyosin contractile ring contraction with increased contraction rate","type":"exact"},{"name":"premature actomyosin contractile ring constriction with increased constriction rate","type":"exact"},{"name":"premature actomyosin contractile ring constriction with increased rate of contraction","type":"exact"},{"name":"premature actomyosin contractile ring contraction with increased contraction rate during mitotic cell cycle","type":"related"},{"name":"premature actomyosin contractile ring contraction with increased contraction rate during vegetative growth","type":"exact"},{"name":"premature contractile ring contraction with increased rate of contraction","type":"exact"},{"name":"premature cytokinetic contractile ring contraction with increased rate of contraction","type":"exact"},{"name":"premature mitotic actomyosin contractile ring contraction with increased contraction rate","type":"exact"},{"name":"premature, fast actomyosin contractile ring contraction","type":"exact"}],"termid":"FYPO:0007573"}


id: GO:1904479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intestinal absorption.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:12469120","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of digestive system process","termid":"GO:0060457"},{"relation_name":"is_a","term_name":"regulation of intestinal absorption","termid":"GO:1904478"},{"relation_name":"negatively_regulates","term_name":"intestinal absorption","termid":"GO:0050892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intestinal absorption","synonyms":[{"name":"down regulation of intestinal absorption","type":"exact"},{"name":"down-regulation of intestinal absorption","type":"exact"},{"name":"downregulation of intestinal absorption","type":"exact"},{"name":"inhibition of intestinal absorption","type":"narrow"}],"termid":"GO:1904479"}


id: PBO:0038325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-immersed_in","termid":"PBO:0038325"}


id: GO:0075166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its G-protein gamma subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of G-protein gamma subunit-mediated signal transduction in response to host (obsolete GO:0075166)","synonyms":[{"name":"positive regulation of symbiont G-protein gamma subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075166"}


id: PBO:0085577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 2'-O-methylation of C32 of substrate tRNAs; interacts with 2'-O-ribose methyltransferase Trm7p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; non-essential gene; yeast null mutant can be functionally complemented by human THADA, mutations in which have been implicated in epithelial thyroid adenomas, type 2 diabetes, and polycystic ovary syndrome (PCOS)","termid":"PBO:0085577"}


id: PATO:0001089
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001089 elasticity value (obsolete PATO:0001089)","termid":"PATO:0001089"}


id: GO:0001800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of type IIb hypersensitivity, a type of inflammatory response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type IIb hypersensitivity","termid":"GO:0001799"},{"relation_name":"is_a","term_name":"negative regulation of type II hypersensitivity","termid":"GO:0002893"},{"relation_name":"negatively_regulates","term_name":"type IIb hypersensitivity","termid":"GO:0001795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type IIb hypersensitivity","synonyms":[{"name":"down regulation of type IIb hypersensitivity","type":"exact"},{"name":"down-regulation of type IIb hypersensitivity","type":"exact"},{"name":"downregulation of type IIb hypersensitivity","type":"exact"},{"name":"inhibition of type IIb hypersensitivity","type":"narrow"}],"termid":"GO:0001800"}


id: FYPO:0001903
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the septation index is normal (i.e. indistinguishable from wild type). The septation index is the proportion of the population undergoing septation at any given time, and is usually around 10% (varying between 7-15%) for vegetatively growing wild type cell populations, and less for stationary populations.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal septation index","synonyms":[{"name":"normal septation","type":"related"}],"termid":"FYPO:0001903"}


id: PBO:0090470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [4Fe-4S] cluster assembly and transfer protein Isa2","termid":"PBO:0090470"}


id: MONDO:0003693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm characterized by the presence of cystic glandular and fibrous tissues and clear cells.","definition_xrefs":["NCIT:C8988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clear cell adenofibroma","termid":"MONDO:0003460"},{"relation_name":"is_a","term_name":"cystadenofibroma","termid":"MONDO:0003464"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clear cell cystadenofibroma","secondary_identifiers":["DOID:5895","MEDGEN:235121","UMLS:C1377853"],"synonyms":[{"name":"clear cell cystadenofibroma","type":"exact"}],"termid":"MONDO:0003693","xrefs":{"Monarch":{"xref_id":"0003693"}}}


id: PBO:0045480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmocollin 2","termid":"PBO:0045480"}


id: PBO:0048947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOT1 divergent transcript","termid":"PBO:0048947"}


id: GO:1901083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving pyrrolizidine alkaloid.","definition_xrefs":["GOC:yaf","UniPathway:UPA00329","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrrolizidine alkaloid metabolic process (obsolete GO:1901083)","synonyms":[{"name":"pyrrolizidine alkaloid metabolism","type":"exact"}],"termid":"GO:1901083"}


id: MONDO:1012073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple exostoses, non-human animal","termid":"MONDO:1011944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple exostoses, dog","secondary_identifiers":["OMIA:000354-9615"],"termid":"MONDO:1012073","xrefs":{"Monarch":{"xref_id":"1012073"}}}


id: PBO:0071141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 4","termid":"PBO:0071141"}


id: PBO:0001567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Imp4 (predicted)","termid":"PBO:0001567"}


id: PBO:0064619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 6 homeobox 1","termid":"PBO:0064619"}


id: PBO:0082715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the NuA3b histone acetyltransferase complex; regulates interaction between NuA3b and H3K36me3 at the transcribed regions of genes; contains PWWP domain; deletion confers sensitivity to 4-(N-(S-glutathionylacetyl)amino) phenylarsenoxide (GSAO); protein abundance increases in response to DNA replication stress; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082715"}


id: PBO:0054692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2101","termid":"PBO:0054692"}


id: PBO:0066225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 28","termid":"PBO:0066225"}


id: FYPO:0005674
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of ubiquitinated protein measured the cell is higher than normal during a cellular response to methyl methanesulfonate. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of ubiquitinated protein in cell during vegetative growth","termid":"FYPO:0002774"},{"relation_name":"is_a","term_name":"increased protein level during cellular response to methyl methanesulfonate","termid":"FYPO:0005333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate","synonyms":[{"name":"increased accumulation of ubiquitinated protein in cell during cellular response to methyl methanesulfonate","type":"related"},{"name":"increased level of ubiquitinated protein in cell during cellular response to MMS","type":"exact"},{"name":"increased level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"increased level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"increased level of ubiquitylated protein in cell during cellular response to methyl methanesulfonate","type":"exact"},{"name":"increased ubiquitinated protein level during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"}],"termid":"FYPO:0005674"}


id: PBO:0089964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP 5'-nucleotidase Isn1","termid":"PBO:0089964"}


id: PBO:0004332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIB complex subunit Brf1","termid":"PBO:0004332"}


id: PBO:0078811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA selenocysteine 1 associated protein 1","termid":"PBO:0078811"}


id: PBO:0027977
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K4_trimethylation","termid":"PBO:0027977"}


id: PBO:0063003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet activating factor acetylhydrolase 1b regulatory subunit 1","termid":"PBO:0063003"}


id: PBO:0056465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated serine/threonine kinase 3","termid":"PBO:0056465"}


id: PBO:0003892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cycloisomerase 2 family","termid":"PBO:0003892"}


id: PBO:0061115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 6","termid":"PBO:0061115"}


id: PBO:0053137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine decarboxylase 1, pseudogene","termid":"PBO:0053137"}


id: MONDO:0018645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of endocrine system","termid":"MONDO:0000569"},{"relation_name":"is_a","term_name":"autoimmune disorder of gastrointestinal tract","termid":"MONDO:0000588"},{"relation_name":"is_a","term_name":"immunoglobulin G4-related sclerosing disease","termid":"MONDO:0017287"},{"relation_name":"is_a","term_name":"sclerosing cholangitis","termid":"MONDO:0018646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0005046"],"is_obsolete":false,"name":"IgG4-related sclerosing cholangitis","secondary_identifiers":["GARD:21867","icd11.foundation:1676971795","NANDO:1200928","SCTID:722870008","UMLS:C4302109","MEDGEN:927778","Orphanet:447764"],"termid":"MONDO:0018645","xrefs":{"Monarch":{"xref_id":"0018645"}}}


id: MOD:00117
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-glutamine residue by a thioester bond with the formation of S-(L-isoglutamyl)-L-cysteine and the release of ammonia.","definition_xrefs":["ChEBI:22021","PubMed:6838833","RESID:AA0108","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of ammonia","termid":"MOD:00946"},{"relation_name":"is_a","term_name":"crosslinked L-glutamine residue","termid":"MOD:02046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(L-isoglutamyl)-L-cysteine","synonyms":[{"name":"(2S)-2-amino-5-[(2R)-2-amino-2-carboxyethyl]sulfanyl-5-oxopentanoic acid","type":"exact"},{"name":"(S,R)-2-amino-4-[S-(2-amino-2-carboxyethyl)thiocarboxy]butanoic acid","type":"exact"},{"name":"2-amino-5-(2-amino-2-carboxyethyl)thio-5-oxopentanoic acid","type":"exact"},{"name":"CROSSLNK Isoglutamyl cysteine thioester (Cys-Gln)","type":"exact"},{"name":"S-(L-isoglutamyl)-L-cysteine","type":"exact"},{"name":"S-gamma-glutamyl (crosslinked to cysteine)","type":"exact"},{"name":"XLNK-SCys-5Glu(Gln)","type":"exact"},{"name":"gamma-(S-cysteinyl)glutamic acid","type":"exact"}],"termid":"MOD:00117"}


id: GO:0042054
data:
  {"annotated_genes":["SJAG_03487","SJAG_04574","SJAG_01146","SJAG_00769","SJAG_00943","SJAG_03548","SJAG_02873","SJAG_01193","SJAG_02756","SJAG_03630","SJAG_02350","SJAG_00596","SJAG_02659"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72699,78136,78275,115517],"is_not":false,"summary":null,"term":"GO:0042054"},{"annotations":[77267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008469"},{"annotations":[112176,75050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990259"},{"annotations":[97385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140954"},{"annotations":[80380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046975"},{"annotations":[65287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140955"},{"annotations":[58245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062122"},{"annotations":[80379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042800"},{"annotations":[58964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140999"},{"annotations":[112472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140948"},{"annotations":[63706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140949"},{"annotations":[112474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140947"},{"annotations":[119029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140943"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + histone = S-adenosyl-L-homocysteine + methyl-histone. Histone methylation generally occurs on either an arginine or a lysine residue.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methyltransferase activity","termid":"GO:0008276"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00596":null,"SJAG_00769":null,"SJAG_00943":null,"SJAG_01146":null,"SJAG_01193":null,"SJAG_02350":null,"SJAG_02659":null,"SJAG_02756":null,"SJAG_02873":null,"SJAG_03487":null,"SJAG_03548":null,"SJAG_03630":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0140096","GO:0016740","GO:0003824","GO:0008276"],"is_obsolete":false,"name":"histone methyltransferase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9822583","Reactome:R-HSA-5205861","Reactome:R-HSA-5216234"],"synonyms":[{"name":"histone N-methyltransferase activity","type":"exact"},{"name":"histone methylase activity","type":"exact"}],"termid":"GO:0042054","terms_by_termid":{"GO:0008469":null,"GO:0042054":null,"GO:0042800":null,"GO:0046975":null,"GO:0062122":null,"GO:0140943":null,"GO:0140947":null,"GO:0140948":null,"GO:0140949":null,"GO:0140954":null,"GO:0140955":null,"GO:0140999":null,"GO:1990259":null}}


id: PBO:0061950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 2","termid":"PBO:0061950"}


id: PBO:0089978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-H2B chaperone, FACT complex subunit Pob3","termid":"PBO:0089978"}


id: PBO:0059912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 35","termid":"PBO:0059912"}


id: PBO:0053393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 322","termid":"PBO:0053393"}


id: GO:0034748
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains Par3, the tumor suppressor protein adenomatous polyposis coli (APC), and the kinesin-related protein KIF3A; involved in establishing neuronal cell polarity.","definition_xrefs":["PMID:15556865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Par3-APC-KIF3A complex","termid":"GO:0034748"}


id: PBO:0039199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B1 pseudogene 2","termid":"PBO:0039199"}


id: GO:0047272
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: polyprenyl phosphate + UDP-D-glucose = polyprenylphosphate-glucose + UDP.","definition_xrefs":["EC:2.4.1.78","MetaCyc:2.4.1.78-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"phosphopolyprenol glucosyltransferase activity","synonyms":[{"name":"UDP-glucose:phosphopolyprenol D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:phosphopolyprenol D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:polyprenol monophosphate glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-polyprenol monophosphate glucosyltransferase activity","type":"related"}],"termid":"GO:0047272"}


id: PBO:0055931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37B pseudogene 1","termid":"PBO:0055931"}


id: GO:0052602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-chloronitrobenzene + NADPH + H+ = 1-chloro-4-nitrosobenzene + NADP+ + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-chloronitrobenzene nitroreductase activity (obsolete GO:0052602)","termid":"GO:0052602"}


id: GO:0015370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + Na+(out) = solute(in) + Na+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"solute:sodium symporter activity","secondary_identifiers":["Reactome:R-HSA-8876283"],"synonyms":[{"name":"proline/glycine/betaine:hydrogen/sodium symporter activity","type":"narrow"}],"termid":"GO:0015370"}


id: PBO:0075937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stabilin 2","termid":"PBO:0075937"}


id: PR:Q9UUH8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC630.04c gene.","definition_xrefs":["UniProtKB:Q9UUH8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C630.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.04c","synonyms":[{"name":"Spom972h-SPAC630.04c","type":"exact"}],"termid":"PR:Q9UUH8"}


id: PR:P04909
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A-alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:15226425","PMID:19965387","PMID:21516229","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A-alpha","termid":"PR:000027558"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"core histone (Schizosaccharomyces pombe)","termid":"PR:000041293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.08c","secondary_identifiers":["UniProtKB:P04909","PR:000027559"],"synonyms":[{"name":"SPCC622.08C","type":"related"},{"name":"Spom972h-hta1","type":"exact"}],"termid":"PR:P04909"}


id: PBO:0041101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSD domain containing 1","termid":"PBO:0041101"}


id: GO:0016980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: creatine + H2O = sarcosine + urea.","definition_xrefs":["EC:3.5.3.3","RHEA:22456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"creatinase activity","secondary_identifiers":["MetaCyc:CREATINASE-RXN","KEGG_REACTION:R01566"],"synonyms":[{"name":"creatine amidinohydrolase activity","type":"related"}],"termid":"GO:0016980"}


id: PBO:0068453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 29, pseudogene","termid":"PBO:0068453"}


id: PBO:0045157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 12","termid":"PBO:0045157"}


id: PBO:0079554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 7","termid":"PBO:0079554"}


id: PBO:0004578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatA N-acetyltransferase complex subunit (predicted)","termid":"PBO:0004578"}


id: MONDO:0013196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary nonpolyposis colon cancer in which the cause of the disease is a mutation in the EPCAM gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Lynch syndrome","termid":"MONDO:0005835"},{"relation_name":"is_a","term_name":"hereditary nonpolyposis colon cancer","termid":"MONDO:0018630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"Lynch syndrome 8","secondary_identifiers":["GARD:15638","MEDGEN:412966","UMLS:C2750471","MESH:C567685","DOID:0070270","OMIM:613244"],"synonyms":[{"name":"EPCAM hereditary nonpolyposis colon cancer","type":"exact"},{"name":"HNPCC8","type":"related"},{"name":"colorectal cancer, hereditary nonpolyposis, type 8","type":"exact"},{"name":"hereditary nonpolyposis colon cancer caused by mutation in EPCAM","type":"exact"}],"termid":"MONDO:0013196","xrefs":{"Monarch":{"xref_id":"0013196"}}}


id: MONDO:0100201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A vertebral column disorder caused by degeneration of intervertebral disks of the lumbar spine. One of the most common musculoskeletal disorders, it has strong genetic determinants.","definition_xrefs":["OMIM:603932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vertebral column disorder","termid":"MONDO:0000812"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lumbar disk disease","secondary_identifiers":["UMLS:C0221775","MEDGEN:67462"],"termid":"MONDO:0100201","xrefs":{"Monarch":{"xref_id":"0100201"}}}


id: MONDO:0859382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 50 with or without glaucoma","secondary_identifiers":["MEDGEN:1840935","UMLS:C5830299","OMIM:620253"],"termid":"MONDO:0859382","xrefs":{"Monarch":{"xref_id":"0859382"}}}


id: PBO:0110326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALDOC antisense RNA 1","termid":"PBO:0110326"}


id: GO:1901221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac chamber morphogenesis.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of cardiac chamber morphogenesis","termid":"GO:1901219"},{"relation_name":"positively_regulates","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac chamber morphogenesis","synonyms":[{"name":"activation of cardiac chamber morphogenesis","type":"narrow"},{"name":"activation of heart chamber morphogenesis","type":"narrow"},{"name":"positive regulation of heart chamber morphogenesis","type":"exact"},{"name":"up regulation of cardiac chamber morphogenesis","type":"exact"},{"name":"up regulation of heart chamber morphogenesis","type":"exact"},{"name":"up-regulation of cardiac chamber morphogenesis","type":"exact"},{"name":"up-regulation of heart chamber morphogenesis","type":"exact"},{"name":"upregulation of cardiac chamber morphogenesis","type":"exact"},{"name":"upregulation of heart chamber morphogenesis","type":"exact"}],"termid":"GO:1901221"}


id: GO:0043159
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structural framework, or 'dense core' at the interior of an acrosome. May regulate the distribution of hydrolases within the acrosome and their release during the acrosome reaction.","definition_xrefs":["GOC:jl","PMID:8949900","PMID:9139729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"acrosomal vesicle","termid":"GO:0001669"},{"relation_name":"part_of","term_name":"vacuole","termid":"GO:0005773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"acrosomal matrix","termid":"GO:0043159"}


id: FYPO:0000909
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to linear elements is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during meiosis","termid":"FYPO:0002957"},{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome","termid":"FYPO:0004996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to linear element","synonyms":[{"name":"abnormal protein localisation to linear element","type":"exact"}],"termid":"FYPO:0000909"}


id: FYPO:0001624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-asparagine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal vacuolar asparagine level","synonyms":[{"name":"normal level of asparagine in vacuole","type":"exact"},{"name":"normal vacuolar L-asparagine level","type":"exact"},{"name":"normal vacuolar asparagine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar asparagine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001624"}


id: GO:2000126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of octopamine or tyramine signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"regulation of octopamine or tyramine signaling pathway","termid":"GO:2000125"},{"relation_name":"negatively_regulates","term_name":"octopamine or tyramine signaling pathway","termid":"GO:0007211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of octopamine or tyramine signaling pathway","synonyms":[{"name":"negative regulation of octopamine or tyramine signalling pathway","type":"exact"},{"name":"negative regulation of octopamine/tyramine signaling pathway","type":"exact"}],"termid":"GO:2000126"}


id: PBO:0075697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol regulatory element binding transcription factor 2","termid":"PBO:0075697"}


id: PBO:0071236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 77","termid":"PBO:0071236"}


id: PBO:0011074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methyl-2-oxobutanoatehydroxymethyltransferase (predicted)","termid":"PBO:0011074"}


id: GO:0048909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior lateral line nerve over time, form its formation to the mature structure. The anterior lateral line nerve contains efferent axons that innervate hair cells of the ALL and afferent axons that project to an octavolateralis column in the hindbrain. The octavolateralis column consists of the medial octavolateralis nucleus (MON), the caudal octavolateralis nucleus, and the magnocellular nucleus.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:cls","GOC:jid","GO_REF:0000021","ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve development","termid":"GO:0048892"},{"relation_name":"part_of","term_name":"anterior lateral line system development","termid":"GO:0048898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line nerve development","secondary_identifiers":["GO:0021734"],"synonyms":[{"name":"ALLN development","type":"exact"},{"name":"nALL development","type":"exact"},{"name":"rostral lateral line nerve development","type":"exact"}],"termid":"GO:0048909"}


id: MONDO:0005803
data:
  {"annotated_genes":["SJAG_00154","SJAG_03266","SJAG_04495","SJAG_04334"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859362"},{"annotations":[88322,88323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011236"},{"annotations":[88660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011717"}]},"cv_name":"mondo","definition":"An inherited autosomal recessive syndrome characterized by the disorganized formation of new islets in the pancreas and congenital hyperinsulinism. It is due to focal hyperplasia of pancreatic islet cells budding off from the ductal structures and forming new islets of langerhans. Mutations in the islet cells involve the potassium channel gene kcnj11 or the atp-binding cassette transporter gene abcc8, both on chromosome 11.","definition_xrefs":["MESH:D046768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"},{"relation_name":"is_a","term_name":"inborn carbohydrate metabolic disorder","termid":"MONDO:0019214"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00154":null,"SJAG_03266":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"hyperinsulinemic hypoglycemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:42681006","OMIMPS:256450","NCIT:C4375","Orphanet:443095","UMLS:C1864903","DOID:13317","EFO:0007318","MEDGEN:351247","NANDO:2100143","HP:0000825","GARD:21849","NANDO:2200399"],"synonyms":[{"name":"hyperinsulinemia hypoglycemia","type":"exact"},{"name":"hyperinsulinemic hypoglycemia (disease)","type":"exact"},{"name":"islet cell hyperplasia","type":"exact"},{"name":"nesidioblastosis","type":"related"},{"name":"persistent hyperinsulinemia hypoglycemia of infancy","type":"exact"}],"termid":"MONDO:0005803","terms_by_termid":{"MONDO:0011236":null,"MONDO:0011717":null,"MONDO:0859362":null},"xrefs":{"Monarch":{"xref_id":"0005803"}}}


id: MONDO:0012151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"attention deficit-hyperactivity disorder","termid":"MONDO:0007743"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attention deficit-hyperactivity disorder, susceptibility to, 3","secondary_identifiers":["UMLS:C1837151","OMIM:608905","MEDGEN:323085"],"synonyms":[{"name":"ADHD3","type":"exact"},{"name":"attention Deficit-hyperactivity disorder, susceptibility to, type 3","type":"exact"},{"name":"attention deficit-hyperactivity disorder, susceptibility to, 3","type":"exact"}],"termid":"MONDO:0012151","xrefs":{"Monarch":{"xref_id":"0012151"}}}


id: PBO:0017730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TREX complex subunit, ATP-dependent RNA helicase Uap56","termid":"PBO:0017730"}


id: GO:0052364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in its symbiont resulting in the breakdown of substances. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of substance in symbiont (obsolete GO:0052364)","termid":"GO:0052364"}


id: PR:Q9HGM7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nitrogen permease regulator 3-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrogen permease regulator 3-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC543.04","secondary_identifiers":["UniProtKB:Q9HGM7"],"synonyms":[{"name":"Spom972h-NPRL3","type":"exact"}],"termid":"PR:Q9HGM7"}


id: MONDO:0004992
data:
  {"annotated_genes":["SJAG_05979","SJAG_01349","SJAG_04114","SJAG_04394","SJAG_01671","SJAG_04885","SJAG_01970","SJAG_01111","SJAG_04206","SJAG_02261","SJAG_03689","SJAG_02426","SJAG_03131","SJAG_00980","SJAG_04755","SJAG_00490","SJAG_02226","SJAG_01895","SJAG_00757","SJAG_02049","SJAG_00079","SJAG_04502","SJAG_01748","SJAG_04699","SJAG_00229","SJAG_01151","SJAG_04287","SJAG_00260","SJAG_00440","SJAG_02527","SJAG_00997","SJAG_04213","SJAG_03905","SJAG_04884","SJAG_02460","SJAG_01082","SJAG_05313","SJAG_01620","SJAG_01013","SJAG_02231","SJAG_01410","SJAG_01144","SJAG_03720","SJAG_02187","SJAG_04067","SJAG_03787","SJAG_02748","SJAG_01419","SJAG_03453","SJAG_01837","SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89064,89067,89221,89066,89222,89065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[88131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011655"},{"annotations":[89025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"},{"annotations":[87995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0002629"},{"annotations":[88311,88309,88308,89190,88315,88312,88310,88314,88313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005575"},{"annotations":[86852,89121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011962"},{"annotations":[87665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015278"},{"annotations":[88903,88902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0001056"},{"annotations":[88477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007256"},{"annotations":[89177,88028,88030,89179,89178,88026,88029,88027,89180,89181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016419"},{"annotations":[87989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0003789"},{"annotations":[88643,88644,89196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008903"},{"annotations":[88200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007356"},{"annotations":[87014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012249"},{"annotations":[87464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013699"},{"annotations":[87466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013710"},{"annotations":[87477,87476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008018"},{"annotations":[88618,88616,88617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007763"},{"annotations":[88330,88329,88328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008170"},{"annotations":[88876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[87456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[87666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"},{"annotations":[87703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012004"},{"annotations":[89186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009693"},{"annotations":[88180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"},{"annotations":[88467,88468,88466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0700275"},{"annotations":[89173,89172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013872"},{"annotations":[87008,87009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012252"},{"annotations":[89184,89185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"},{"annotations":[88784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859046"},{"annotations":[87680,89158,89159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008566"},{"annotations":[88118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0001187"}]},"cv_name":"mondo","definition":"A tumor composed of atypical neoplastic, often pleomorphic cells that invade other tissues. Malignant neoplasms often metastasize to distant anatomic sites and may recur after excision. The most common malignant neoplasms are carcinomas (adenocarcinomas or squamous cell carcinomas), Hodgkin and non-Hodgkin lymphomas, leukemias, melanomas, and sarcomas.","definition_xrefs":["NCIT:C9305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00079":null,"SJAG_00229":null,"SJAG_00260":null,"SJAG_00440":null,"SJAG_00490":null,"SJAG_00757":null,"SJAG_00980":null,"SJAG_00997":null,"SJAG_01013":null,"SJAG_01082":null,"SJAG_01111":null,"SJAG_01144":null,"SJAG_01151":null,"SJAG_01349":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01620":null,"SJAG_01671":null,"SJAG_01748":null,"SJAG_01837":null,"SJAG_01895":null,"SJAG_01970":null,"SJAG_02049":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02231":null,"SJAG_02261":null,"SJAG_02426":null,"SJAG_02460":null,"SJAG_02527":null,"SJAG_02748":null,"SJAG_03131":null,"SJAG_03453":null,"SJAG_03677":null,"SJAG_03689":null,"SJAG_03720":null,"SJAG_03787":null,"SJAG_03905":null,"SJAG_04067":null,"SJAG_04114":null,"SJAG_04206":null,"SJAG_04213":null,"SJAG_04287":null,"SJAG_04394":null,"SJAG_04502":null,"SJAG_04699":null,"SJAG_04755":null,"SJAG_04884":null,"SJAG_04885":null,"SJAG_05313":null,"SJAG_05979":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"is_obsolete":false,"name":"cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICDO:8000/3","ICD9:199.1","ICD9:199","UMLS:C0006826","ICD9:195.8","DOID:0050687","DOID:0050686","DOID:162","MEDGEN:14297","NIFSTD:birnlex_406","ONCOTREE:MT","SCTID:363346000"],"synonyms":[{"name":"CA","type":"exact"},{"name":"MT","type":"related"},{"name":"cancer","type":"exact"},{"name":"cell type cancer","type":"exact"},{"name":"malignancy","type":"exact"},{"name":"malignant growth","type":"exact"},{"name":"malignant neoplasm","type":"exact"},{"name":"malignant neoplasm (disease)","type":"exact"},{"name":"malignant neoplastic disease","type":"exact"},{"name":"malignant tumor","type":"exact"},{"name":"malignant tumour","type":"exact"},{"name":"neoplasm (disease), malignant","type":"exact"},{"name":"neoplasm, malignant","type":"exact"},{"name":"primary cancer","type":"exact"}],"termid":"MONDO:0004992","terms_by_termid":{"MONDO:0001056":null,"MONDO:0001187":null,"MONDO:0002629":null,"MONDO:0003789":null,"MONDO:0005575":null,"MONDO:0007256":null,"MONDO:0007273":null,"MONDO:0007356":null,"MONDO:0007763":null,"MONDO:0008018":null,"MONDO:0008170":null,"MONDO:0008566":null,"MONDO:0008903":null,"MONDO:0009693":null,"MONDO:0011014":null,"MONDO:0011121":null,"MONDO:0011655":null,"MONDO:0011962":null,"MONDO:0012004":null,"MONDO:0012249":null,"MONDO:0012252":null,"MONDO:0013224":null,"MONDO:0013602":null,"MONDO:0013699":null,"MONDO:0013710":null,"MONDO:0013872":null,"MONDO:0014937":null,"MONDO:0015278":null,"MONDO:0016419":null,"MONDO:0018874":null,"MONDO:0700275":null,"MONDO:0859046":null},"xrefs":{"Monarch":{"xref_id":"0004992"}}}


id: GO:0048229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the gametophyte over time, from its formation to the mature structure. The gametophyte is the gamete-producing individual or phase in the life cycle having alternation of generations. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:jid","PO:0009004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gametophyte development","synonyms":[{"name":"gametogenesis","type":"broad"}],"termid":"GO:0048229"}


id: GO:0009692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ethylene (C2-H4, ethene), a simple hydrocarbon gas that can function in plants as a growth regulator.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ethylene metabolic process","synonyms":[{"name":"ethene metabolic process","type":"exact"},{"name":"ethene metabolism","type":"exact"},{"name":"ethylene metabolism","type":"exact"}],"termid":"GO:0009692"}


id: MOD:01931
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-phospho-L-lysine.","definition_xrefs":["RESID:AA0585","PubMed:20144148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"N-phosphorylated residue","termid":"MOD:01456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"N6-phospho-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(phosphonoamino)hexanoic acid","type":"exact"},{"name":"(2S)-2-azanyl-6-(phosphonoamino)hexanoic acid","type":"exact"},{"name":"6-phospholysine","type":"exact"},{"name":"N(6)-phosphonolysine","type":"exact"},{"name":"N(epsilon)-phospholysine","type":"exact"},{"name":"N(epsilon)-phosphonolysine","type":"exact"},{"name":"N(epsilon)-phosphonyllysine","type":"exact"},{"name":"N(epsilon)-phosphoryllysine","type":"exact"},{"name":"N6-phospho-L-lysine","type":"exact"}],"termid":"MOD:01931"}


id: PBO:0039930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 35","termid":"PBO:0039930"}


id: PBO:0076776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TDRKH antisense RNA 1","termid":"PBO:0076776"}


id: PBO:0109463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR9-2 host gene","termid":"PBO:0109463"}


id: PBO:0059722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 30","termid":"PBO:0059722"}


id: PBO:0039109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AHNAK nucleoprotein 2","termid":"PBO:0039109"}


id: PBO:0114070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myogenesis regulating glycosidase","termid":"PBO:0114070"}


id: GO:0010932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of macrophage tolerance induction.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"regulates","term_name":"macrophage tolerance induction","termid":"GO:0010931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage tolerance induction","termid":"GO:0010932"}


id: GO:0051369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The decanoylation of peptidyl-threonine to form peptidyl-O3-decanoyl-L-threonine, typical of the protein ghrelin.","definition_xrefs":["PMID:11546772","GOC:jsg","RESID:AA0387"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-threonine decanoylation (obsolete GO:0051369)","termid":"GO:0051369"}


id: PBO:0087567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of telomeric Ku complex (Yku70p-Yku80p); involved in telomere length maintenance, structure and telomere position effect; required for localization of telomerase ribonucleoprotein via interaction with TLC1 guide RNA; relocates to sites of double-strand cleavage to promote nonhomologous end joining during DSB repair; colocalizes with quiescent cell telomere hyperclusters","termid":"PBO:0087567"}


id: PBO:0087199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Saccharopine dehydrogenase (NAD+, L-lysine-forming); catalyzes the conversion of saccharopine to L-lysine, which is the final step in the lysine biosynthesis pathway; also has mRNA binding activity","termid":"PBO:0087199"}


id: PBO:0001089
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as gnr1 in error","termid":"PBO:0001089"}


id: GO:0198738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that mediates the transfer of information from one cell to another, medaited by a wnt family protein ligand. This process includes wnt signal transduction in the receiving cell, release of wnt ligand from a secreting cell as well as any processes that actively facilitate wnt transport and presentation to receptor on the receiving cell.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete cell-cell signaling by wnt (obsolete GO:0198738)","termid":"GO:0198738"}


id: PBO:0051515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IKAROS family zinc finger 5","termid":"PBO:0051515"}


id: GO:0070024
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the cell surface signaling molecule CD19, the Ras guanine nucleotide exchange factor Vav, and the regulatory subunit alpha of phosphatidylinositol 3-kinase (PI3K).","definition_xrefs":["PMID:7528218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"CD19-Vav-PIK3R1 complex","synonyms":[{"name":"CD19-Vav-PI 3-kinase (p85 subunit) complex","type":"exact"}],"termid":"GO:0070024"}


id: MONDO:0005346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Solid crystalline precipitates in the biliary tract, usually formed in the gallbladder, resulting in the condition of cholelithiasis. Gallstones, derived from the bile, consist mainly of calcium, cholesterol, or bilirubin.","definition_xrefs":["MESH:D042882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder disorder","termid":"MONDO:0005281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"gallstones","secondary_identifiers":["SCTID:235919008","MEDGEN:66850","ICD9:574.20","EFO:0004210","UMLS:C0242216"],"termid":"MONDO:0005346","xrefs":{"Monarch":{"xref_id":"0005346"}}}


id: GO:1905303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macropinocytosis.","definition_xrefs":["GOC:TermGenie","GOC:pad","PMID:18691641","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of pinocytosis","termid":"GO:0048549"},{"relation_name":"is_a","term_name":"regulation of macropinocytosis","termid":"GO:1905301"},{"relation_name":"positively_regulates","term_name":"macropinocytosis","termid":"GO:0044351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"positive regulation of macropinocytosis","synonyms":[{"name":"activation of macropinocytosis","type":"narrow"},{"name":"up regulation of macropinocytosis","type":"exact"},{"name":"up-regulation of macropinocytosis","type":"exact"},{"name":"upregulation of macropinocytosis","type":"exact"}],"termid":"GO:1905303"}


id: MONDO:0971171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"SNUPN-related muscular dystrophy with or without multi-system involvement","termid":"MONDO:0100584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320","MONDO:0006025"],"is_obsolete":false,"name":"muscular dystrophy, limb-girdle, autosomal recessive 29","secondary_identifiers":["UMLS:C5935611","MEDGEN:1861320","OMIM:620793"],"termid":"MONDO:0971171","xrefs":{"Monarch":{"xref_id":"0971171"}}}


id: GO:0033839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + a flavonol 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside = UDP + a flavonol 3-O-beta-D-glucosyl-(1->2)-beta-D-glucosyl-(1->2)-beta-D-glucoside.","definition_xrefs":["EC:2.4.1.240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"flavonol-3-O-glycoside glucosyltransferase activity","secondary_identifiers":["RHEA:23544","MetaCyc:2.4.1.240-RXN"],"synonyms":[{"name":"UDP-glucose:flavonol-3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside 2'''-O-beta-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0033839"}


id: PBO:0079567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin associated and SH3 domain containing B","termid":"PBO:0079567"}


id: MONDO:0007874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Langer-Giedon syndrome, also known as trichorhinophalangeal syndrome type 2, is a very rare, genetic, multiple congenital anomaly disorder characterized by bone abnormalities, distinctive facial features, multiple exostoses, and intellectual disability.","definition_xrefs":["Orphanet:502"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 8","termid":"MONDO:0016907"},{"relation_name":"is_a","term_name":"trichorhinophalangeal syndrome","termid":"MONDO:0017951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"trichorhinophalangeal syndrome type II","secondary_identifiers":["SCTID:41069008","icd11.foundation:315453775","UMLS:C0023003","MESH:D015826","DOID:4998","GARD:7801","MedDRA:10050638","MEDGEN:6009","NCIT:C75118","NORD:1788","ICD9:759.89","OMIM:150230"],"synonyms":[{"name":"Giedion-Langer syndrome","type":"related"},{"name":"Langer Giedion syndrome","type":"related"},{"name":"Langer-Giedion syndrome","type":"exact"},{"name":"TRPS 2","type":"related"},{"name":"TRPS2","type":"related"},{"name":"chromosome 8Q24.1 deletion syndrome","type":"related"},{"name":"deletion 8q24.1","type":"exact"},{"name":"monosomy 8q24.1","type":"exact"},{"name":"trichorhinophalangeal dysplasia type II","type":"exact"},{"name":"trichorhinophalangeal syndrome type 2","type":"exact"},{"name":"trichorhinophalangeal syndrome, type 2","type":"related"},{"name":"trichorhinophalangeal syndrome, type II","type":"related"}],"termid":"MONDO:0007874","xrefs":{"Monarch":{"xref_id":"0007874"}}}


id: GO:0052327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the symbiont organism mediated by a substance secreted by the other organism by a type II secretion system. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with symbiont via protein secreted by type II secretion system (obsolete GO:0052327)","synonyms":[{"name":"interaction with symbiont via protein secreted by type II secretion system","type":"exact"}],"termid":"GO:0052327"}


id: PBO:0060748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFB2 antisense RNA 1","termid":"PBO:0060748"}


id: GO:0061299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the vasculature of the retina is generated and organized.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"retina vasculature development in camera-type eye","termid":"GO:0061298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina vasculature morphogenesis in camera-type eye","synonyms":[{"name":"retinal vasculature morphogenesis","type":"exact"}],"termid":"GO:0061299"}


id: PBO:0034587
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short_glycerophospholipids","termid":"PBO:0034587"}


id: PBO:0088687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ergothioneine biosynthesis protein Egt1","termid":"PBO:0088687"}


id: GO:1900420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of  alcohol catabolic process within a cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of alcohol catabolic process","termid":"GO:1900419"},{"relation_name":"negatively_regulates","term_name":"alcohol catabolic process","termid":"GO:0046164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of alcohol catabolic process","synonyms":[{"name":"down regulation of cellular alcohol catabolic process","type":"exact"},{"name":"down-regulation of cellular alcohol catabolic process","type":"exact"},{"name":"downregulation of cellular alcohol catabolic process","type":"exact"},{"name":"inhibition of cellular alcohol catabolic process","type":"narrow"}],"termid":"GO:1900420"}


id: PBO:0062087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 18 pseudogene","termid":"PBO:0062087"}


id: PBO:0049554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 16, pseudogene","termid":"PBO:0049554"}


id: PBO:0043889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corticotropin releasing hormone receptor 1","termid":"PBO:0043889"}


id: GO:0018828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the elimination of HCl from a chloro- or bromopropanol, yielding an epoxypropane.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete halohydrin hydrogen-halide-lyase A activity (obsolete GO:0018828)","termid":"GO:0018828"}


id: FYECO:0000211
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which MMS (methyl methanesulfonate) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ MMS","synonyms":[{"name":"methyl methanesulfonate added","type":"exact"}],"termid":"FYECO:0000211"}


id: GO:1905433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of retrograde trans-synaptic signaling by neuropeptide.","definition_xrefs":["GOC:TermGenie","PMID:19448629","GOC:PARL","GOC:bf","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"is_a","term_name":"negative regulation of signaling","termid":"GO:0023057"},{"relation_name":"is_a","term_name":"regulation of retrograde trans-synaptic signaling by neuropeptide","termid":"GO:1905432"},{"relation_name":"negatively_regulates","term_name":"retrograde trans-synaptic signaling by neuropeptide","termid":"GO:0099082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of retrograde trans-synaptic signaling by neuropeptide","synonyms":[{"name":"down regulation of retrograde trans-synaptic signaling by neuropeptide","type":"exact"},{"name":"down-regulation of retrograde trans-synaptic signaling by neuropeptide","type":"exact"},{"name":"downregulation of retrograde trans-synaptic signaling by neuropeptide","type":"exact"},{"name":"inhibition of neuropeptide-mediated retrograde trans-synaptic signaling","type":"related"},{"name":"inhibition of retrograde trans-synaptic signaling by neuropeptide","type":"narrow"},{"name":"negative regulation of neuropeptide-mediated retrograde trans-synaptic signaling","type":"related"}],"termid":"GO:1905433"}


id: MONDO:0010163
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tyrosinosis","secondary_identifiers":["OMIM:276800","MEDGEN:78683","UMLS:C0268484","SCTID:57414003","ICD9:270.2","MESH:C562659"],"synonyms":[{"name":"Tyrosinosis","type":"exact"}],"termid":"MONDO:0010163","xrefs":{"Monarch":{"xref_id":"0010163"}}}


id: PBO:0014579
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"although this is demonstrated to be DNA polymerase epsilon interactor and names Dpb3, it appears to be the ortholog of S. cerevisie BUR6 and human DRAP1. The real Dpb3 appears to be the newly identified SPCC16C4.22 date=20120829","termid":"PBO:0014579"}


id: MONDO:1012013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arthritis deformans, non-human animal","termid":"MONDO:1011936"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthritis deformans, pig","secondary_identifiers":["OMIA:000065-9823"],"termid":"MONDO:1012013","xrefs":{"Monarch":{"xref_id":"1012013"}}}


id: SO:0000269
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a serine anticodon, and a 3' serine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"serine_tRNA_primary_transcript","termid":"SO:0000226"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seryl_tRNA","synonyms":[{"name":"seryl tRNA","type":"exact"},{"name":"seryl-transfer RNA","type":"exact"},{"name":"seryl-transfer ribonucleic acid","type":"related"}],"termid":"SO:0000269"}


id: PBO:0040771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 6","termid":"PBO:0040771"}


id: GO:0120248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an acetylenic compound, any compound which contains a carbon-carbon triple bond (aka C#C).","definition_xrefs":["GOC:krc","DOI:10.1007/978-1-4615-4913-0_3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"acetylenic compound metabolic process","termid":"GO:0120246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetylenic compound catabolic process","synonyms":[{"name":"alkyne substituted compound breakdown","type":"exact"},{"name":"alkyne substituted compound catabolic process","type":"exact"},{"name":"alkyne substituted compound catabolism","type":"exact"},{"name":"alkyne substituted compound degradation","type":"exact"}],"termid":"GO:0120248"}


id: PBO:0032767
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ark1 kinase consensus phosphorylation site is [RK]-X-[ST]","termid":"PBO:0032767"}


id: GO:0031003
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular structure, approximately 13 nm in diameter, consisting of three actin filaments bundled together.","definition_xrefs":["GOC:kp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle","termid":"GO:0032432"},{"relation_name":"part_of","term_name":"actin rod","termid":"GO:0031002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"actin tubule","termid":"GO:0031003"}


id: PBO:0048841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceronephosphate O-acyltransferase","termid":"PBO:0048841"}


id: PBO:0087018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonucleotide reductase inhibitor; involved in regulating dNTP production; regulated by Mec1p and Rad53p during DNA damage and S phase; SML1 has a paralog, DIF1, that arose from the whole genome duplication","termid":"PBO:0087018"}


id: PBO:0028392
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glyoxalase_III_activity","termid":"PBO:0028392"}


id: FYPO:0004059
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which reciprocal meiotic recombination is normal (i.e. indistinguishable from wild type) at an CRE promoter in a chromosome.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic recombination","termid":"FYPO:0000488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic recombination at CRE promoter","synonyms":[{"name":"normal meiotic recombination at M26 binding site","type":"exact"}],"termid":"FYPO:0004059"}


id: PBO:0061055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nipsnap homolog 3A","termid":"PBO:0061055"}


id: GO:0043584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the nose over time, from its formation to the mature structure. The nose is the specialized structure of the face that serves as the organ of the sense of smell and as part of the respiratory system. Includes the nasi externus (external nose) and cavitas nasi (nasal cavity).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nose development","synonyms":[{"name":"nasus development","type":"exact"}],"termid":"GO:0043584"}


id: MONDO:0007494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete episodic kinesigenic dyskinesia 1 (obsolete MONDO:0007494)","secondary_identifiers":["NANDO:1200521"],"termid":"MONDO:0007494","xrefs":{"Monarch":{"xref_id":"0007494"}}}


id: PBO:0051708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase K","termid":"PBO:0051708"}


id: PBO:0063679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 3","termid":"PBO:0063679"}


id: GO:0048912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a glial cell along the axons in the anterior lateral line nerve.","definition_xrefs":["PMID:12062041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve glial cell migration","termid":"GO:0048896"},{"relation_name":"part_of","term_name":"anterior lateral line nerve development","termid":"GO:0048909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell migration in anterior lateral line nerve","termid":"GO:0048912"}


id: GO:0070322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the rate of translation as a result of a stimulus indicating deprivation of nitrogen.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of translation in response to nitrogen starvation (obsolete GO:0070322)","synonyms":[{"name":"down regulation of translation in response to nitrogen starvation","type":"exact"},{"name":"down-regulation of translation in response to nitrogen starvation","type":"exact"},{"name":"downregulation of translation in response to nitrogen starvation","type":"exact"},{"name":"inhibition of translation in response to nitrogen starvation","type":"narrow"}],"termid":"GO:0070322"}


id: MONDO:0019351
data:
  {"annotated_genes":["SJAG_01466","SJAG_04042","SJAG_04459","SJAG_04156","SJAG_04425","SJAG_03712","SJAG_00106"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89215,89217,89214,89211,89212,89213,89216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011120"}]},"cv_name":"mondo","definition":"A spina bifida (disease) that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida","termid":"MONDO:0008449"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_01466":null,"SJAG_03712":null,"SJAG_04042":null,"SJAG_04156":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"isolated spina bifida","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10041524","GARD:7673","Orphanet:823"],"synonyms":[{"name":"cleft spine","type":"related"},{"name":"isolated spina bifida (disease)","type":"exact"},{"name":"nonsyndromic spina bifida (disease)","type":"exact"},{"name":"open spine","type":"related"}],"termid":"MONDO:0019351","terms_by_termid":{"MONDO:0011120":null},"xrefs":{"Monarch":{"xref_id":"0019351"}}}


id: MONDO:0011108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Stüve-Wiedemann syndrome (obsolete MONDO:0011108)","termid":"MONDO:0011108","xrefs":{"Monarch":{"xref_id":"0011108"}}}


id: GO:0031937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of chromatin silencing.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of chromatin silencing (obsolete GO:0031937)","synonyms":[{"name":"activation of chromatin silencing","type":"narrow"},{"name":"positive regulation of heterochromatic silencing","type":"exact"},{"name":"stimulation of chromatin silencing","type":"narrow"},{"name":"up regulation of chromatin silencing","type":"exact"},{"name":"up-regulation of chromatin silencing","type":"exact"},{"name":"upregulation of chromatin silencing","type":"exact"}],"termid":"GO:0031937"}


id: GO:0051740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ethylene (C2-H4, ethene), a simple hydrocarbon gas that can function in plants as a growth regulator.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene binding","termid":"GO:0072328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ethylene binding","synonyms":[{"name":"ethene binding","type":"exact"}],"termid":"GO:0051740"}


id: PBO:0064490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I and III subunit C","termid":"PBO:0064490"}


id: GO:0036334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of the steady-state number of epidermal stem cells within a population of cells.","definition_xrefs":["CL:1000428","GOC:nhn","PMID:17666529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epidermal stem cell homeostasis","termid":"GO:0036334"}


id: PBO:0069948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1241, pseudogene","termid":"PBO:0069948"}


id: GO:0102898
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + levopimaradienol + NADPH + O2 = levopiramadiene-diol + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete levopimaradienol hydroxylase activity (obsolete GO:0102898)","termid":"GO:0102898"}


id: PBO:0113557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex beta subunit Wbp1","termid":"PBO:0113557"}


id: PBO:0079294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 11","termid":"PBO:0079294"}


id: PBO:0077886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p63 regulated 1","termid":"PBO:0077886"}


id: PBO:0090011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAi-mediated heterochromatin assembly helicase Hrr1","termid":"PBO:0090011"}


id: MONDO:0018888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital cornea plana (obsolete MONDO:0018888)","termid":"MONDO:0018888","xrefs":{"Monarch":{"xref_id":"0018888"}}}


id: PBO:0017437
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-related_via_localization_to","termid":"PBO:0017437"}


id: RO:0002565
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between p and c when p is locomotion process and the outcome of this process is the change of location of c","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_movement_of","termid":"RO:0002565"}


id: MONDO:0800112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-atopic asthma (obsolete MONDO:0800112)","termid":"MONDO:0800112","xrefs":{"Monarch":{"xref_id":"0800112"}}}


id: MONDO:0023208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fuqua Berkovitz syndrome","termid":"MONDO:0023208","xrefs":{"Monarch":{"xref_id":"0023208"}}}


id: PBO:0084987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP(+)-dependent glutamate dehydrogenase; synthesizes glutamate from ammonia and alpha-ketoglutarate; rate of alpha-ketoglutarate utilization differs from Gdh3p; expression regulated by nitrogen and carbon sources; GDH1 has a paralog, GDH3, that arose from the whole genome duplication","termid":"PBO:0084987"}


id: CHEBI:31823
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A mercury coordination entity made up of linear triatomic molecules in which a mercury atom is bonded to two chlorines","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mercury dichloride","termid":"CHEBI:31823"}


id: MONDO:1011995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gyrate atrophy of choroid and retina, non-human animal","secondary_identifiers":["OMIA:001774"],"termid":"MONDO:1011995","xrefs":{"Monarch":{"xref_id":"1011995"}}}


id: PBO:0071807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 2","termid":"PBO:0071807"}


id: GO:0103097
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trihomomethionine + 2 O2 + 2 NADPH + 2 H+ = 3 H2O + carbon dioxide + 2 NADP + 6-methylthiohexanaldoxime.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete CYP79F1 trihomomethionine monooxygenase activity (obsolete GO:0103097)","termid":"GO:0103097"}


id: PATO:0000693
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000693 late (obsolete PATO:0000693)","termid":"PATO:0000693"}


id: PR:Q9C0V5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB7E8.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0V5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB7E8.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB7E8.01","synonyms":[{"name":"Spom972h-SPBPB7E8.01","type":"exact"}],"termid":"PR:Q9C0V5"}


id: GO:0043759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 2-methylbutanoate + CoA = AMP + diphosphate + 2-methylbutanoyl-CoA.","definition_xrefs":["RHEA:46180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid-CoA ligase activity","termid":"GO:0031955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"2-methylbutanoate-CoA ligase activity","synonyms":[{"name":"branched chain acyl CoA synthetase (ADP-forming) activity","type":"exact"},{"name":"branched chain acyl-CoA synthetase (ADP-forming) activity","type":"exact"},{"name":"branched-chain acyl CoA synthetase (ADP-forming) activity","type":"exact"},{"name":"branched-chain acyl-CoA synthetase (ADP-forming) activity","type":"related"}],"termid":"GO:0043759"}


id: FYPO:0003496
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which azetidine-2-carboxylic acid acetyltransferase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal azetidine-2-carboxylic acid acetyltransferase activity","termid":"FYPO:0003495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abolished azetidine-2-carboxylic acid acetyltransferase activity","synonyms":[{"name":"azetidine-2-carboxylic acid acetyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0003496"}


id: GO:0006491
data:
  {"annotated_genes":["SJAG_03280","SJAG_03535","SJAG_04571"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78521,80201,115759],"is_not":false,"summary":null,"term":"GO:0006491"}]},"cv_name":"biological_process","definition":"The conversion of N-linked glycan (N = nitrogen) structures from the initially transferred oligosaccharide to a mature form, by the actions of glycosidases and glycosyltransferases. The early processing steps are conserved and play roles in glycoprotein folding and trafficking.","definition_xrefs":["ISBN:0879695595","PMID:12736198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein metabolic process","termid":"GO:0009100"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03280":null,"SJAG_03535":null,"SJAG_04571":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-glycan processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006492"],"synonyms":[{"name":"N-linked glycoprotein maturation","type":"exact"},{"name":"glycoprotein trimming involved in glycoprotein maturation","type":"narrow"}],"termid":"GO:0006491","terms_by_termid":{"GO:0006491":null}}


id: MONDO:0017482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"humeral agenesis/hypoplasia","termid":"MONDO:0017440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"humeral agenesis/hypoplasia, unilateral","secondary_identifiers":["Orphanet:295061"],"synonyms":[{"name":"humeral intercalary meromelia, unilateral","type":"exact"}],"termid":"MONDO:0017482","xrefs":{"Monarch":{"xref_id":"0017482"}}}


id: GO:0050260
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribose 5-phosphate + ATP + NH4 = 5-phospho-D-ribosylamine + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.4.7","RHEA:13777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"ribose-5-phosphate-ammonia ligase activity","secondary_identifiers":["MetaCyc:RIBOSE-5-PHOSPHATE--AMMONIA-LIGASE-RXN","KEGG_REACTION:R01053"],"synonyms":[{"name":"5-phosphoribosylamine synthetase activity","type":"related"},{"name":"ammonia-ribose 5-phosphate aminotransferase activity","type":"related"},{"name":"ribose 5-phosphate aminotransferase activity","type":"related"},{"name":"ribose-5-phosphate:ammonia ligase (ADP-forming)","type":"related"}],"termid":"GO:0050260"}


id: GO:0014821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within phasic smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the phasic smooth muscle, the muscle contraction occurs without an ordered sarcomeric structure. Phasic smooth muscle contraction occurs in a series of discrete contractions and relaxations.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phasic smooth muscle contraction","termid":"GO:0014821"}


id: GO:0047336
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxy-5-methyl-5'-cytidylate + ATP = 5-methyldeoxycytidine diphosphate + ADP + H+.","definition_xrefs":["EC:2.7.4.19","RHEA:11396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"5-methyldeoxycytidine-5'-phosphate kinase activity","secondary_identifiers":["KEGG_REACTION:R04235","MetaCyc:2.7.4.19-RXN"],"synonyms":[{"name":"ATP:5-methyldeoxycytidine-5'-phosphate phosphotransferase activity","type":"related"}],"termid":"GO:0047336"}


id: GO:0018014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of the N-terminal methionine of proteins to form the derivative N-methyl-L-methionine.","definition_xrefs":["RESID:AA0064"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-methionine methylation (obsolete GO:0018014)","termid":"GO:0018014"}


id: GO:0046257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 2,4,6-trinitrotoluene, 1-methyl-2,4,6-trinitrobenzene, a highly explosive pale yellow crystalline solid, in the absence of oxygen.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete anaerobic 2,4,6-trinitrotoluene biosynthetic process (obsolete GO:0046257)","synonyms":[{"name":"anaerobic 2,4,6-trinitrotoluene anabolism","type":"exact"},{"name":"anaerobic 2,4,6-trinitrotoluene biosynthesis","type":"exact"},{"name":"anaerobic 2,4,6-trinitrotoluene biosynthetic process","type":"exact"},{"name":"anaerobic 2,4,6-trinitrotoluene formation","type":"exact"},{"name":"anaerobic 2,4,6-trinitrotoluene synthesis","type":"exact"}],"termid":"GO:0046257"}


id: GO:1901340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of store-operated calcium channel activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transporter activity","termid":"GO:1901020"},{"relation_name":"is_a","term_name":"regulation of store-operated calcium channel activity","termid":"GO:1901339"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of store-operated calcium channel activity","synonyms":[{"name":"down regulation of store-operated calcium channel activity","type":"exact"},{"name":"down-regulation of store-operated calcium channel activity","type":"exact"},{"name":"downregulation of store-operated calcium channel activity","type":"exact"},{"name":"inhibition of store-operated calcium channel activity","type":"narrow"}],"termid":"GO:1901340"}


id: PBO:0038601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with coiled-coil, ankyrin repeat and PH domains 2","termid":"PBO:0038601"}


id: MONDO:0015935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"germinoma","termid":"MONDO:0002598"},{"relation_name":"is_a","term_name":"extragonadal germ cell cancer","termid":"MONDO:0003113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"extragonadal germinoma","secondary_identifiers":["Orphanet:182127","MedDRA:10018207","MEDGEN:1673080","GARD:2005","MESH:D018237","UMLS:C5190513"],"termid":"MONDO:0015935","xrefs":{"Monarch":{"xref_id":"0015935"}}}


id: GO:0031052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Regulated cleavage of the developing macronuclear genome at a limited number of chromosome breakage sites (CBS). The macronuclear destined segment (MDS) sequence adjacent to the CBS (or separated from it by a BES) receives a macronuclear telomere following chromosome breakage.","definition_xrefs":["PMID:15956677","PMID:32165395","PMID:25303953","GOC:ns"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed DNA elimination","termid":"GO:0031049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"programmed DNA elimination by chromosome breakage","synonyms":[{"name":"chromosome breakage","type":"related"}],"termid":"GO:0031052"}


id: PBO:0041819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiac mesoderm enhancer-associated non-coding RNA","termid":"PBO:0041819"}


id: PBO:0063744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 9","termid":"PBO:0063744"}


id: PBO:0049653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 7","termid":"PBO:0049653"}


id: PBO:0013037
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human PNKP","termid":"PBO:0013037"}


id: PBO:0035992
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein-protein_interaction_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0035992"}


id: GO:0060517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication of epithelial cells, contributing to the expansion of the primary prostatic bud.","definition_xrefs":["GOC:dph","PMID:18977204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation involved in prostate gland development","termid":"GO:0060767"},{"relation_name":"part_of","term_name":"primary prostatic bud elongation","termid":"GO:0060516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation involved in prostatic bud elongation","termid":"GO:0060517"}


id: GO:0042720
data:
  {"annotated_genes":["SJAG_03648","SJAG_02809"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78604,81750],"is_not":false,"summary":null,"term":"GO:0042720"}]},"cv_name":"cellular_component","definition":"Protease complex of the mitochondrial inner membrane, consisting of at least two subunits, involved in processing of both nuclear- and mitochondrially-encoded proteins targeted to the intermembrane space.","definition_xrefs":["PMID:10821182","PMID:12191769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"},{"relation_name":"is_a","term_name":"serine-type endopeptidase complex","termid":"GO:1905370"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02809":null,"SJAG_03648":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005739"],"is_obsolete":false,"name":"mitochondrial inner membrane peptidase complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"IMP","type":"narrow"},{"name":"mitochondrion inner membrane peptidase complex","type":"exact"}],"termid":"GO:0042720","terms_by_termid":{"GO:0042720":null}}


id: PBO:0085634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in histone H2B ubiquitination; acts as cofactor for Bre1p; null mutant forms abnormally large cells, and homozygous diploid null mutant displays delayed premeiotic DNA synthesis and reduced efficiency of meiotic nuclear division","termid":"PBO:0085634"}


id: PBO:0090440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I complex subunit Rpa49","termid":"PBO:0090440"}


id: MONDO:1012505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hydrallantois, non-human animal","termid":"MONDO:1011672"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrallantois, sheep","secondary_identifiers":["OMIA:002053-9940"],"termid":"MONDO:1012505","xrefs":{"Monarch":{"xref_id":"1012505"}}}


id: PBO:0077856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPM1 antisense RNA","termid":"PBO:0077856"}


id: PBO:0036419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L7a involved in ribosome biogenesis","termid":"PBO:0036419"}


id: GO:0005883
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of intermediate filament found in the core of neuronal axons. Neurofilaments are heteropolymers composed of three type IV polypeptides: NF-L, NF-M, and NF-H (for low, middle, and high molecular weight). Neurofilaments are responsible for the radial growth of an axon and determine axonal diameter.","definition_xrefs":["ISBN:0815316194","ISBN:0198506732","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament","termid":"GO:0005882"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"neurofilament","secondary_identifiers":["NIF_Subcellular:sao1316272517","Wikipedia:Neurofilament"],"synonyms":[{"name":"type IV intermediate filament","type":"exact"}],"termid":"GO:0005883"}


id: PBO:0080622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 64","termid":"PBO:0080622"}


id: GO:0016772
data:
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id: MONDO:0019530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital condition characterized by webbing between the fingers and/or toes, joining the digits together. In rare cases, the joining of the fingers or toes may involve bony fusion between the digits. Common causes include Down Syndrome and hereditary syndactyly.","definition_xrefs":["NCIT:C87125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndactyly","termid":"MONDO:0021002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-syndromic syndactyly","secondary_identifiers":["Orphanet:90025","MedDRA:10042778","MEDGEN:1842957","icd11.foundation:1736296640","UMLS:C5681365"],"synonyms":[{"name":"chromosome 2q35 duplication syndrome","type":"narrow"},{"name":"isolated syndactyly","type":"related"},{"name":"nonsyndromic syndactyly","type":"exact"},{"name":"symphalangism","type":"related"},{"name":"symphalangy","type":"related"},{"name":"syndactyly","type":"related"},{"name":"webbing of digits","type":"related"}],"termid":"MONDO:0019530","xrefs":{"Monarch":{"xref_id":"0019530"}}}


id: MONDO:0004508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the periapical tissue. It includes general, unspecified, or acute nonsuppurative inflammation. Chronic nonsuppurative inflammation is periapical granuloma. Suppurative inflammation is periapical abscess.","definition_xrefs":["MESH:D010485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periodontitis","termid":"MONDO:0005076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periapical periodontitis","secondary_identifiers":["DOID:823","SCTID:39273001","UMLS:C0031030","EFO:1001391","icd11.foundation:1395124674","MEDGEN:45396"],"synonyms":[{"name":"apical periodontitis","type":"exact"}],"termid":"MONDO:0004508","xrefs":{"Monarch":{"xref_id":"0004508"}}}


id: MONDO:0010649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated congenital megalocornea is a genetic, non-syndromic developmental defect of the anterior eye segment characterized by bilateral enlargement of the corneal diameter (>12.5 mm) and a deep anterior eye chamber, without an elevation in intraocular pressure. It can manifest with mild to moderate myopia as well as photophobia and iridodonesis (due to iris hypoplasia). Associated complications include lens dislocation, retinal detachment, presenile cataract development, and secondary glaucoma.","definition_xrefs":["Orphanet:91489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megalocornea","termid":"MONDO:0009576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated congenital megalocornea","secondary_identifiers":["UMLS:C4518341","SCTID:734026006","GARD:12648","MEDGEN:1385311","OMIM:309300"],"synonyms":[{"name":"MGC1","type":"related"},{"name":"Mgcn","type":"related"},{"name":"congenital anterior megalophthalmia","type":"exact"},{"name":"isolated congenital megalocornea","type":"exact"},{"name":"megalocornea","type":"related"},{"name":"megalocornea 1, X-linked, X-linked recessive","type":"exact"}],"termid":"MONDO:0010649","xrefs":{"Monarch":{"xref_id":"0010649"}}}


id: GO:0099509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the concentration of calcium in the presynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytosolic calcium ion concentration","termid":"GO:0051480"},{"relation_name":"is_a","term_name":"neuron cellular homeostasis","termid":"GO:0070050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"regulation of presynaptic cytosolic calcium ion concentration","synonyms":[{"name":"regulation of presynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:0099509"}


id: GO:1904159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a megasporocyte.","definition_xrefs":["GOC:TermGenie","GOC:tair_curators","GO_REF:0000086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporocyte differentiation","termid":"GO:0048533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"megasporocyte differentiation","synonyms":[{"name":"megaspore mother cell differentiation","type":"exact"}],"termid":"GO:1904159"}


id: PBO:0067406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 516, pseudogene","termid":"PBO:0067406"}


id: FYPO:0003745
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H3 acetylation occurs to a greater extent than normal in the central core of the centromeric regions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3 acetylation during vegetative growth","termid":"FYPO:0002363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H3 acetylation at centromere central core during vegetative growth","synonyms":[{"name":"increased histone H3 acetylation at centromere central core during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003745"}


id: GO:0034427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of the mRNA transcript body that occurs when the 3' end is not protected by a 3'-poly(A) tail; degradation proceeds in the 3' to 5' direction.","definition_xrefs":["GOC:mah","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' (obsolete GO:0034427)","termid":"GO:0034427"}


id: MONDO:0016401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete energy metabolism disorder with epilepsy (obsolete MONDO:0016401)","secondary_identifiers":["Orphanet:225696"],"termid":"MONDO:0016401","xrefs":{"Monarch":{"xref_id":"0016401"}}}


id: GO:0021636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the trigeminal nerve is generated and organized. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae.","definition_xrefs":["ISBN:0838580343","GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"trigeminal nerve development","termid":"GO:0021559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal nerve morphogenesis","synonyms":[{"name":"CN V morphogenesis","type":"related"}],"termid":"GO:0021636"}


id: GO:0044640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant negative regulation of complement activation via the lectin pathway in the bitten/stung organism.","definition_xrefs":["GOC:jl","PMID:20837040","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in negative regulation of complement activation, lectin pathway in another organism (obsolete GO:0044640)","synonyms":[{"name":"envenomation resulting in negative regulation of complement activation, lectin pathway in other organism","type":"exact"}],"termid":"GO:0044640"}


id: MONDO:0009337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Hennekam syndrome in which the cause of the disease is a mutation in the CCBE1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hennekam syndrome","termid":"MONDO:0016256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Hennekam lymphangiectasia-lymphedema syndrome 1","secondary_identifiers":["MEDGEN:860487","GARD:15181","UMLS:C4012050","OMIM:235510"],"synonyms":[{"name":"CCBE1 Hennekam syndrome","type":"exact"},{"name":"HKLLS1","type":"related"},{"name":"Hennekam lymphangiectasia-lymphedema syndrome","type":"related"},{"name":"Hennekam lymphangiectasia-lymphedema syndrome 1","type":"exact"},{"name":"Hennekam lymphangiectasia-lymphedema syndrome type 1","type":"exact"},{"name":"Hennekam syndrome caused by mutation in CCBE1","type":"exact"},{"name":"lymphatic dysplasia, generalised","type":"related"},{"name":"lymphatic dysplasia, generalized","type":"related"}],"termid":"MONDO:0009337","xrefs":{"Monarch":{"xref_id":"0009337"}}}


id: MONDO:0025485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acquired defect of cellular immunity that occurs in cats infected with feline immunodeficiency virus (fiv) and in some cats infected with feline leukemia virus (Felv).","definition_xrefs":["MESH:D016181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cat disease","termid":"MONDO:0024912"},{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"},{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline acquired immunodeficiency syndrome","synonyms":[{"name":"AIDS, Feline","type":"related"},{"name":"FAIDS","type":"related"},{"name":"Feline AIDS","type":"related"},{"name":"Feline acquired immune deficiency syndrome","type":"related"},{"name":"Feline acquired immuno deficiency syndrome","type":"related"},{"name":"Feline acquired immuno-deficiency syndrome","type":"related"},{"name":"Feline immunodeficiency virus cat disease","type":"exact"},{"name":"Feline immunodeficiency virus caused cat disease","type":"exact"}],"termid":"MONDO:0025485","xrefs":{"Monarch":{"xref_id":"0025485"}}}


id: MONDO:0100270
data:
  {"annotated_genes":["SJAG_03781"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013951"}]},"cv_name":"mondo","definition":"Any Zellweger spectrum disorder in which the cause of the disease is a mutation in the PEX19 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Zellweger spectrum disorders","termid":"MONDO:0019609"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03781":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005066","MONDO:0006025","MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"peroxisome biogenesis disorder due to PEX19 defect","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PEX19 related Zellweger spectrum disorder","type":"exact"},{"name":"peroxisome biogenesis disorder due to PEX19 defect","type":"exact"}],"termid":"MONDO:0100270","terms_by_termid":{"MONDO:0013951":null},"xrefs":{"Monarch":{"xref_id":"0100270"}}}


id: GO:0005416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: amino acid(out) + cation(out) = amino acid(in) + cation(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"amino acid:monoatomic cation symporter activity","synonyms":[{"name":"amino acid:cation symporter activity","type":"broad"},{"name":"cation/amino acid symporter activity","type":"exact"},{"name":"cation:amino acid symporter activity","type":"exact"}],"termid":"GO:0005416"}


id: FYPO:0003988
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has actin cortical patches in one or more abnormal locations.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"},{"relation_name":"is_a","term_name":"mislocalized actin cortical patches","termid":"FYPO:0006771"},{"relation_name":"output_of","term_name":"abnormal actin cortical patch localization during vegetative growth","termid":"FYPO:0000190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0004803","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"mislocalized actin cortical patches during vegetative growth","synonyms":[{"name":"abnormal actin cortical patch location during vegetative growth","type":"exact"},{"name":"abnormal actin cortical patch position during vegetative growth","type":"exact"},{"name":"mislocalised actin cortical patches during vegetative growth","type":"exact"},{"name":"mislocalized F-actin patches during vegetative growth","type":"exact"},{"name":"mislocalized actin cortical patches during mitotic cell cycle","type":"related"},{"name":"mislocalized actin patches during vegetative growth","type":"exact"}],"termid":"FYPO:0003988"}


id: MONDO:0006561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Under-production of pigment in the eyelid.","definition_xrefs":["EFO:1000713"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eyelid degenerative disorder","termid":"MONDO:0000941"},{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"eyelid hypopigmentation","secondary_identifiers":["DOID:11668","ICD9:374.53","UMLS:C0155212","SCTID:68210006","MEDGEN:509852"],"synonyms":[{"name":"hypopigmentation of eyelid","type":"exact"}],"termid":"MONDO:0006561","xrefs":{"Monarch":{"xref_id":"0006561"}}}


id: PBO:0011959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial_nucleotide_deletion","termid":"PBO:0011959"}


id: GO:0098786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the disassembly of a biofilm matrix.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix disassembly","termid":"GO:0022617"},{"relation_name":"is_a","term_name":"biofilm matrix organization","termid":"GO:0098784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biofilm matrix disassembly","termid":"GO:0098786"}


id: PR:O13943
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A late secretory pathway protein AVL9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late secretory pathway protein avl9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.14","secondary_identifiers":["UniProtKB:O13943"],"synonyms":[{"name":"Spom972h-AVL9","type":"exact"}],"termid":"PR:O13943"}


id: FYPO:0005315
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of negative regulation of transcription at the central core of the centromeric regions is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere central core","termid":"FYPO:0000640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased chromatin silencing at centromere central core","synonyms":[{"name":"increased chromatin silencing at centromere central core during mitotic cell cycle","type":"related"},{"name":"increased chromatin silencing at centromere central core during vegetative growth","type":"exact"},{"name":"increased negative regulation of transcription at centromere central core","type":"related"},{"name":"increased transcriptional repression at centromere central core","type":"related"}],"termid":"FYPO:0005315"}


id: GO:1904753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vascular associated smooth muscle cell migration.","definition_xrefs":["GOC:rph","GO_REF:0000058","GOC:BHF_miRNA","PMID:20693317","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle cell migration","termid":"GO:0014912"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell migration","termid":"GO:1904752"},{"relation_name":"negatively_regulates","term_name":"vascular associated smooth muscle cell migration","termid":"GO:1904738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular associated smooth muscle cell migration","synonyms":[{"name":"down regulation of vascular associated smooth muscle cell migration","type":"exact"},{"name":"down regulation of vascular smooth muscle cell migration","type":"exact"},{"name":"down-regulation of vascular associated smooth muscle cell migration","type":"exact"},{"name":"down-regulation of vascular smooth muscle cell migration","type":"exact"},{"name":"downregulation of vascular associated smooth muscle cell migration","type":"exact"},{"name":"downregulation of vascular smooth muscle cell migration","type":"exact"},{"name":"inhibition of vascular associated smooth muscle cell migration","type":"narrow"},{"name":"inhibition of vascular smooth muscle cell migration","type":"narrow"},{"name":"negative regulation of vascular smooth muscle cell migration","type":"exact"}],"termid":"GO:1904753"}


id: SO:0002362
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for cytosolic SSU rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_rRNA_gene","termid":"SO:0002360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_SSU_rRNA_gene","synonyms":[{"name":"cytosolic small subunit rRNA gene","type":"exact"}],"termid":"SO:0002362"}


id: GO:0051933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The uptake of amino acid neurotransmitters by neurons or glial cells. This process leads to inactivation and recycling of neurotransmitters.","definition_xrefs":["ISBN:0123668387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"neurotransmitter reuptake","termid":"GO:0098810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"amino acid neurotransmitter reuptake","synonyms":[{"name":"amino acid neurotransmitter import into glial cell","type":"narrow"},{"name":"amino acid neurotransmitter import into neuron","type":"narrow"},{"name":"amino acid neurotransmitter recycling","type":"broad"},{"name":"amino acid uptake during transmission of nerve impulse","type":"related"}],"termid":"GO:0051933"}


id: MOD:01739
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Proteome Sciences TMT6plex-128 reporter+balance group.","definition_xrefs":["Unimod:737#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-128 reporter+balance reagent acylated residue","termid":"MOD:01736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-128 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01739"}


id: PBO:0072575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleotide reductase M2 polypeptide pseudogene 3","termid":"PBO:0072575"}


id: SO:1000106
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000106 mutation_causing_inframe_polypeptide_N_terminal_elongation (obsolete SO:1000106)","synonyms":[{"name":"inframe polypeptide N-terminal elongation","type":"exact"},{"name":"mutation causing inframe polypeptide N terminal elongation","type":"exact"}],"termid":"SO:1000106"}


id: PBO:0074261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLCO4A1 antisense RNA 2","termid":"PBO:0074261"}


id: GO:0036139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-histidyl-[protein] + 2-oxoglutarate + O2 = (3S)-3-hydroxy-L-histidyl-[protein] + succinate + CO2.","definition_xrefs":["RHEA:54256","PMID:21251231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"peptidyl-histidine dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-9630993","MetaCyc:RXN-22839","Reactome:R-HSA-9630967","EC:1.14.11.79"],"synonyms":[{"name":"protein histidyl hydroxylase","type":"broad"},{"name":"protein-L-histidine (3S)-3-hydroxylase","type":"exact"}],"termid":"GO:0036139"}


id: MONDO:0021463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the parathyroid gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"tumor of parathyroid gland","termid":"MONDO:0021360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of parathyroid gland","secondary_identifiers":["SCTID:92272009","ICD9:227.1","ICD10CM:D35.1","icd11.foundation:455097662","NCIT:C3630","MEDGEN:57814","DOID:60008","UMLS:C0154041"],"synonyms":[{"name":"benign neoplasm of parathyroid","type":"exact"},{"name":"benign neoplasm of the parathyroid","type":"exact"},{"name":"benign neoplasm of the parathyroid gland","type":"exact"},{"name":"benign parathyroid gland neoplasm","type":"exact"},{"name":"benign parathyroid gland tumor","type":"exact"},{"name":"benign parathyroid gland tumour","type":"exact"},{"name":"benign parathyroid neoplasm","type":"exact"},{"name":"benign parathyroid tumor","type":"exact"},{"name":"benign parathyroid tumour","type":"exact"},{"name":"benign tumor of parathyroid","type":"exact"},{"name":"benign tumor of parathyroid gland","type":"exact"},{"name":"benign tumor of the parathyroid","type":"exact"},{"name":"benign tumor of the parathyroid gland","type":"exact"},{"name":"benign tumour of parathyroid","type":"exact"},{"name":"benign tumour of parathyroid gland","type":"exact"},{"name":"benign tumour of the parathyroid","type":"exact"},{"name":"benign tumour of the parathyroid gland","type":"exact"},{"name":"parathyroid gland benign neoplasm","type":"exact"},{"name":"parathyroid tumor benign","type":"exact"},{"name":"parathyroid tumour benign","type":"exact"}],"termid":"MONDO:0021463","xrefs":{"Monarch":{"xref_id":"0021463"}}}


id: PBO:0057654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1246","termid":"PBO:0057654"}


id: FYPO:0003799
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type) in cells that are returned to nitrogen-rich medium following nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin binding","termid":"FYPO:0003086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal chromatin binding during recovery from nitrogen starvation","synonyms":[{"name":"normal chromatin binding during recovery from nitrogen depletion","type":"exact"},{"name":"normal chromatin binding during recovery from nitrogen deprivation","type":"related"}],"termid":"FYPO:0003799"}


id: MONDO:1010435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atrial septal defect that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect, non-human animal","termid":"MONDO:1010009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atrial septal defect, domestic cat","secondary_identifiers":["OMIA:000089-9685"],"termid":"MONDO:1010435","xrefs":{"Monarch":{"xref_id":"1010435"}}}


id: PR:Q9UUF1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A deoxyribonuclease TATDN1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease Tat-D (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.08","secondary_identifiers":["UniProtKB:Q9UUF1"],"synonyms":[{"name":"Spom972h-TATDN1","type":"exact"}],"termid":"PR:Q9UUF1"}


id: PBO:0072604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSL1D1 divergent transcript","termid":"PBO:0072604"}


id: MONDO:0021654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous mucinosis","termid":"MONDO:0002523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"diffuse cutaneous mucinosis","secondary_identifiers":["MEDGEN:590581","ICD9:701.8","SCTID:238945000","UMLS:C0406655"],"termid":"MONDO:0021654","xrefs":{"Monarch":{"xref_id":"0021654"}}}


id: GO:0004444
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The removal of a phosphate group from the carbon-1 position of D-myo-inositol 1,4,5-trisphosphate.","definition_xrefs":["GOC:hb","EC:3.1.3.61"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol-1,4,5-trisphosphate 1-phosphatase (obsolete GO:0004444)","synonyms":[{"name":"inositol-1,4,5-trisphosphate 1-phosphatase","type":"exact"}],"termid":"GO:0004444"}


id: MONDO:0044247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete palmomental reflex (obsolete MONDO:0044247)","secondary_identifiers":["OMIM:167700"],"synonyms":[{"name":"PALMOMENTAL reflex","type":"related"}],"termid":"MONDO:0044247","xrefs":{"Monarch":{"xref_id":"0044247"}}}


id: GO:0001216
data:
  {"annotated_genes":["SJAG_04036","SJAG_05006","SJAG_01532","SJAG_00693","SJAG_05153","SJAG_04813","SJAG_05247","SJAG_02730","SJAG_02406","SJAG_02218","SJAG_03241","SJAG_02311","SJAG_02810","SJAG_00987","SJAG_05288","SJAG_01694","SJAG_03346","SJAG_04388","SJAG_03183","SJAG_01307","SJAG_04249","SJAG_00698","SJAG_01062","SJAG_04749","SJAG_00266","SJAG_04009","SJAG_00163","SJAG_04855","SJAG_02472","SJAG_03879","SJAG_03143","SJAG_02326","SJAG_04839","SJAG_01243","SJAG_02252","SJAG_03538","SJAG_03735","SJAG_04712","SJAG_01583","SJAG_03519","SJAG_01916","SJAG_00802","SJAG_04092","SJAG_00210","SJAG_03484"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61948,90655,64110,99205,79178,118076,101420,62188,109537,98490,109940,110780,111331,111668,116581,68621,81205,118476,91336,65002,89454,107793,108068,89819,111019,70335,79220,57341,113868,68225,74247,89889,76806,76588,81921,90909,94637,100332,77579,102425,106384,104212,115680,90319,93799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001228"}]},"cv_name":"molecular_function","definition":"A DNA-binding transcription factor activity that activates or increases transcription of specific gene sets.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor activity","termid":"GO:0003700"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00163":null,"SJAG_00210":null,"SJAG_00266":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00802":null,"SJAG_00987":null,"SJAG_01062":null,"SJAG_01243":null,"SJAG_01307":null,"SJAG_01532":null,"SJAG_01583":null,"SJAG_01694":null,"SJAG_01916":null,"SJAG_02218":null,"SJAG_02252":null,"SJAG_02311":null,"SJAG_02326":null,"SJAG_02406":null,"SJAG_02472":null,"SJAG_02730":null,"SJAG_02810":null,"SJAG_03143":null,"SJAG_03183":null,"SJAG_03241":null,"SJAG_03346":null,"SJAG_03484":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03735":null,"SJAG_03879":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04092":null,"SJAG_04249":null,"SJAG_04388":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04813":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_05006":null,"SJAG_05153":null,"SJAG_05247":null,"SJAG_05288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003700"}],"interesting_parent_ids":["GO:0003674","GO:0140110","GO:0003700"],"is_obsolete":false,"name":"DNA-binding transcription activator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0001215","GO:0001140"],"synonyms":[{"name":"bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription","type":"related"},{"name":"bacterial-type RNA polymerase transcriptional activator activity, metal ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding","type":"narrow"},{"name":"metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"transcriptional activator activity, bacterial-type RNA polymerase core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"transcriptional activator activity, bacterial-type RNA polymerase proximal promoter sequence-specific DNA binding","type":"related"}],"termid":"GO:0001216","terms_by_termid":{"GO:0001228":null}}


id: MONDO:0010661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe X-linked intellectual disability, Gustavson type is characterized by X-linked intellectual disability, microcephaly, optical atrophy with impaired vision or blindness, a severe hearing defect, facial dysmorphology, spasticity, epileptic seizures and restricted joint movement. It has been described in seven children from two generations of a Swedish family. All patients died in during early childhood.","definition_xrefs":["Orphanet:3078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"severe X-linked intellectual disability, Gustavson type","secondary_identifiers":["DOID:0081123","GARD:5611","MEDGEN:167088","MESH:C536759","OMIM:309555","UMLS:C0795965","SCTID:722213009"],"synonyms":[{"name":"Gustavson syndrome","type":"related"},{"name":"X-linked intellectual disability Gustavson type","type":"related"},{"name":"X-linked mental retardation Gustavson type","type":"related"},{"name":"gust","type":"related"},{"name":"intellectual disability X-linked severe Gustavson type","type":"related"},{"name":"intellectual disability with optic atrophy, deafness, and seizures","type":"related"},{"name":"mental retardation X-linked severe Gustavson type","type":"related"},{"name":"mental retardation with optic atrophy, deafness, and seizures","type":"related"}],"termid":"MONDO:0010661","xrefs":{"Monarch":{"xref_id":"0010661"}}}


id: GO:0030802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cyclic nucleotides.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cyclic nucleotide biosynthetic process (obsolete GO:0030802)","synonyms":[{"name":"regulation of cyclic nucleotide anabolism","type":"exact"},{"name":"regulation of cyclic nucleotide biosynthesis","type":"exact"},{"name":"regulation of cyclic nucleotide formation","type":"exact"},{"name":"regulation of cyclic nucleotide synthesis","type":"exact"}],"termid":"GO:0030802"}


id: MONDO:0006437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete superficial fibromatosis (obsolete MONDO:0006437)","termid":"MONDO:0006437","xrefs":{"Monarch":{"xref_id":"0006437"}}}


id: SO:0000545
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pseudoknots involved in recoding are unique in that, as they play their role as a structure, they are immediately unfolded and their now linear sequence serves as a template for decoding.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudoknot","termid":"SO:0000591"},{"relation_name":"part_of","term_name":"recoding_stimulatory_region","termid":"SO:1001268"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recoding_pseudoknot","synonyms":[{"name":"recoding pseudoknot","type":"exact"}],"termid":"SO:0000545"}


id: GO:0075157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its G protein-coupled receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of G protein-coupled receptor signaling pathway in response to host (obsolete GO:0075157)","synonyms":[{"name":"positive regulation of G-protein coupled receptor protein signaling pathway in response to host","type":"exact"},{"name":"positive regulation of G-protein coupled receptor protein signalling pathway in response to host","type":"exact"},{"name":"positive regulation of symbiont G-protein coupled receptor protein-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075157"}


id: MOD:00894
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified resiues with a mass of 128.058578 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.000001 Da","termid":"MOD:00569"},{"relation_name":"is_a","term_name":"residues isobaric at 128.0-128.1","termid":"MOD:00893"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 128.058578 Da","termid":"MOD:00894"}


id: PBO:0003325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human THOC5 ortholog (predicted)","termid":"PBO:0003325"}


id: PBO:0002025
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human infertility","termid":"PBO:0002025"}


id: SO:1000022
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transversion from T to G.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine_to_purine_transversion","termid":"SO:1000018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T_to_G_transversion","synonyms":[{"name":"T to G transversion","type":"exact"}],"termid":"SO:1000022"}


id: PBO:0040846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogenesis of lysosomal organelles complex 1 subunit 1","termid":"PBO:0040846"}


id: PBO:0090152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cul4-RING E3 complex WD repeat protein subunit Ddb1","termid":"PBO:0090152"}


id: PBO:0036424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone activator Aha1","termid":"PBO:0036424"}


id: GO:0050823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the structure and integrity of a peptide antigen and preventing it from being degraded.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide stabilization","termid":"GO:0050822"},{"relation_name":"part_of","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide antigen stabilization","synonyms":[{"name":"peptide antigen stabilization activity","type":"related"}],"termid":"GO:0050823"}


id: GO:0010116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of abscisic acid.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of abscisic acid biosynthetic process","termid":"GO:0010115"},{"relation_name":"is_a","term_name":"positive regulation of isoprenoid metabolic process","termid":"GO:0045828"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"abscisic acid biosynthetic process","termid":"GO:0009688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of abscisic acid biosynthetic process","synonyms":[{"name":"activation of abscisic acid biosynthetic process","type":"narrow"},{"name":"positive regulation of abscisic acid anabolism","type":"exact"},{"name":"positive regulation of abscisic acid biosynthesis","type":"exact"},{"name":"positive regulation of abscisic acid formation","type":"exact"},{"name":"positive regulation of abscisic acid synthesis","type":"exact"},{"name":"stimulation of abscisic acid biosynthetic process","type":"narrow"},{"name":"up regulation of abscisic acid biosynthetic process","type":"exact"},{"name":"up-regulation of abscisic acid biosynthetic process","type":"exact"},{"name":"upregulation of abscisic acid biosynthetic process","type":"exact"}],"termid":"GO:0010116"}


id: GO:1900784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of fumiquinazoline F.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete fumiquinazoline F biosynthetic process (obsolete GO:1900784)","synonyms":[{"name":"fumiquinazoline F anabolism","type":"exact"},{"name":"fumiquinazoline F biosynthesis","type":"exact"},{"name":"fumiquinazoline F formation","type":"exact"},{"name":"fumiquinazoline F synthesis","type":"exact"}],"termid":"GO:1900784"}


id: PBO:0067825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 127","termid":"PBO:0067825"}


id: PBO:0085871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; homologous to the medium chain of mammalian clathrin-associated protein complex; involved in vesicular transport","termid":"PBO:0085871"}


id: FYPO:0005609
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which ubiquitination of lysine at position 119 of histone H2B occurs over a smaller portion of the chromosome than normal in regions surrounding double-strand DNA breaks. Lysine 119 corresponds to the conserved C-terminal lysine of H2B.","definition_xrefs":["PomBase:mah","PMID:27098497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H2B-K119 ubiquitination during vegetative growth","termid":"FYPO:0005607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"decreased spatial extent of histone H2B-K119 ubiquitination at double-strand break site during vegetative growth","synonyms":[{"name":"decreased spatial extent of histone H2B conserved C-terminal lysine ubiquitination at double-strand break site during vegetative growth","type":"exact"},{"name":"decreased spatial extent of histone H2B-K119 ubiquitination at DSB during vegetative growth","type":"exact"},{"name":"decreased spatial extent of histone H2B-K119 ubiquitination at double-strand break site during mitotic cell cycle during vegetative growth","type":"related"},{"name":"decreased spatial extent of histone H2B-K119 ubiquitination at site of double-strand break during vegetative growth","type":"exact"},{"name":"reduced spatial extent of histone H2B-K119 ubiquitination at double-strand break during vegetative growth","type":"exact"}],"termid":"FYPO:0005609"}


id: PBO:0091646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine racemase Alr2","termid":"PBO:0091646"}


id: PBO:0051034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGFL2 antisense RNA 1","termid":"PBO:0051034"}


id: GO:0052189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of the deposition of callose by the host in its cell walls, occurring as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of defense-related host cell wall callose deposition (obsolete GO:0052189)","synonyms":[{"name":"modulation by organism of defense-related callose deposition of other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by organism of defense-related cell wall callose deposition in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of defense-related host callose deposition","type":"broad"}],"termid":"GO:0052189"}


id: MONDO:1011810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megakaryoblastic leukemia, non-human animal","secondary_identifiers":["OMIA:000630"],"termid":"MONDO:1011810","xrefs":{"Monarch":{"xref_id":"1011810"}}}


id: PBO:0059516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded L-strand promoter","termid":"PBO:0059516"}


id: PR:Q9UTK7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dsc2 gene.","definition_xrefs":["UniProtKB:Q9UTK7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSC E3 ubiquitin ligase complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.02c","synonyms":[{"name":"Spom972h-dsc2","type":"exact"},{"name":"UBA domain-containing protein 14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"defective for SREBP cleavage protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTK7"}


id: PBO:0002968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxine biosynthesis protein","termid":"PBO:0002968"}


id: PBO:0064792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPM1K divergent transcript","termid":"PBO:0064792"}


id: PBO:0069692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 971, pseudogene","termid":"PBO:0069692"}


id: MONDO:1012801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mitochondrial disease characterized by central nervous system development delay that occurs in pigs due to a mutation in the SURF1 gene created by genetic engineering or gene editing.","definition_xrefs":["PMID:29601977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"mitochondrial disease, non-human animal","termid":"MONDO:1011332"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leigh syndrome, SURF1-related, pig","secondary_identifiers":["OMIA:002147-9823"],"termid":"MONDO:1012801","xrefs":{"Monarch":{"xref_id":"1012801"}}}


id: GO:0018527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclohexylamine + O2 + H2O = cyclohexanone + NH3 + hydrogen peroxide.","definition_xrefs":["PMID:18451","RHEA:18433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary methylamine oxidase activity","termid":"GO:0008131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"cyclohexylamine oxidase activity","secondary_identifiers":["EC:1.4.3.12","UM-BBD_reactionID:r0754","MetaCyc:CYCLOHEXYLAMINE-OXIDASE-RXN"],"synonyms":[{"name":"cyclohexylamine:oxygen oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0018527"}


id: PBO:0012264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal of transmembrane channel, truncated","termid":"PBO:0012264"}


id: PBO:0062965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 8","termid":"PBO:0062965"}


id: PATO:0000424
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000424 occurence value (obsolete PATO:0000424)","termid":"PATO:0000424"}


id: PBO:0075419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPAG5 antisense RNA 1","termid":"PBO:0075419"}


id: PBO:0046340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase family member 5","termid":"PBO:0046340"}


id: MONDO:0009747
data:
  {"annotated_genes":["SJAG_01649"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87462],"is_not":false,"summary":null,"term":"MONDO:0009747"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome, hepatocerebral form","termid":"MONDO:0100512"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01649":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome 6 (hepatocerebral type)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:338045","DOID:0080125","UMLS:C1850406","MESH:C538344","GARD:3972","Orphanet:255229","OMIM:256810"],"synonyms":[{"name":"MPV17-related hepatocerebral mitochondrial DNA depletion syndrome","type":"related"},{"name":"MTDPS6","type":"related"},{"name":"NN","type":"related"},{"name":"Navajo familial neurogenic arthropathy","type":"related"},{"name":"Navajo neurohepatopathy","type":"exact"},{"name":"Navajo neuropathy","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 6","type":"related"},{"name":"mitochondrial DNA depletion syndrome 6 (hepatocerebral type)","type":"exact"}],"termid":"MONDO:0009747","terms_by_termid":{"MONDO:0009747":null},"xrefs":{"Monarch":{"xref_id":"0009747"}}}


id: MONDO:0003496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete endometrial squamous cell carcinoma (obsolete MONDO:0003496)","termid":"MONDO:0003496","xrefs":{"Monarch":{"xref_id":"0003496"}}}


id: SO:0002325
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A splice_donor_variant (SO:0001575) that is degraded by nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_donor_variant","termid":"SO:0001575"},{"relation_name":"is_a","term_name":"NMD_triggering_variant","termid":"SO:0002319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_donor_variant_NMD_triggering","synonyms":[{"name":"splice donor variant-NMD triggering","type":"exact"},{"name":"splice donor variant-nonsense-mediated decay triggering","type":"exact"}],"termid":"SO:0002325"}


id: PBO:0072312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 9","termid":"PBO:0072312"}


id: MONDO:0004480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pancreatic invasive intraductal papillary-mucinous carcinoma (obsolete MONDO:0004480)","termid":"MONDO:0004480","xrefs":{"Monarch":{"xref_id":"0004480"}}}


id: PBO:0078156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 34","termid":"PBO:0078156"}


id: GO:0070996
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 melanocortin receptor.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocortin receptor binding","termid":"GO:0031779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 1 melanocortin receptor binding","synonyms":[{"name":"type 1 melanocortin receptor ligand","type":"narrow"}],"termid":"GO:0070996"}


id: PBO:0031426
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tert-butyl_hydroperoxide","termid":"PBO:0031426"}


id: PBO:0053078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lebercilin LCA5","termid":"PBO:0053078"}


id: MONDO:0031421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary palmoplantar keratoderma characterized by the combination of bilateral mutilating transgredient palmoplantar keratoderma and periorificial keratotic plaques.","definition_xrefs":["Orphanet:659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary palmoplantar keratoderma","termid":"MONDO:0019272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Olmsted syndrome","secondary_identifiers":["MEDGEN:590661","DOID:0112011","MedDRA:10068842","GARD:4075","UMLS:C0406761","OMIMPS:614594"],"synonyms":[{"name":"mutilating palmoplantar hyperkeratosis with periorificial keratotic plaques","type":"exact"},{"name":"palmoplantar and periorificial keratoderma","type":"exact"},{"name":"palmoplantar keratoderma, mutilating, with periorificial keratotic plaques","type":"exact"}],"termid":"MONDO:0031421","xrefs":{"Monarch":{"xref_id":"0031421"}}}


id: MONDO:0017284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome X","termid":"MONDO:0017009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xp22.13p22.2 duplication syndrome","secondary_identifiers":["Orphanet:284180","GARD:21117","UMLS:C5190686","MEDGEN:1684472"],"synonyms":[{"name":"Duplication Xp22","type":"exact"},{"name":"dup(X)(p22)","type":"exact"},{"name":"dup(X)(p22.13p22.2)","type":"exact"}],"termid":"MONDO:0017284","xrefs":{"Monarch":{"xref_id":"0017284"}}}


id: GO:1905265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of blasticidin S.","definition_xrefs":["GOC:TermGenie","PMID:23874663","GO_REF:0000068","GOC:pr","Wikipedia:Blasticidin_S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside catabolic process","termid":"GO:0046135"},{"relation_name":"is_a","term_name":"blasticidin S metabolic process","termid":"GO:1905264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"blasticidin S catabolic process","synonyms":[{"name":"blasticidin S breakdown","type":"exact"},{"name":"blasticidin S catabolism","type":"exact"},{"name":"blasticidin S degradation","type":"exact"}],"termid":"GO:1905265"}


id: PBO:0053852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1121","termid":"PBO:0053852"}


id: MONDO:0007562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple epiphyseal dysplasia, Beighton type is a skeletal dysplasia characterized by epiphyseal dysplasia (usually mild) associated with progressive myopia, retinal thinning, crenated cataracts, conductive deafness, and stubby digits.","definition_xrefs":["Orphanet:166011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple epiphyseal dysplasia","termid":"MONDO:0016648"},{"relation_name":"is_a","term_name":"type 2 collagenopathy","termid":"MONDO:0022800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"multiple epiphyseal dysplasia, Beighton type","secondary_identifiers":["SCTID:719689005","OMIM:132450","UMLS:C1851536","ICD10CM:Q77.3","icd11.foundation:1115252418","MESH:C565046","DOID:0111348","GARD:17012","MEDGEN:377049"],"synonyms":[{"name":"EDMMD","type":"related"},{"name":"epiphyseal dysplasia, multiple, with myopia and conductive deafness","type":"related"},{"name":"epiphyseal dysplasia, multiple, with myopia and deafness","type":"exact"},{"name":"multiple epiphyseal dysplasia-myopia-deafness syndrome","type":"exact"}],"termid":"MONDO:0007562","xrefs":{"Monarch":{"xref_id":"0007562"}}}


id: PBO:0073246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEPSECS antisense RNA 1 (head to head)","termid":"PBO:0073246"}


id: PBO:0082493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic epsilon subunit of the translation initiation factor eIF2B; eIF2B is the guanine-nucleotide exchange factor for eIF2; activity subsequently regulated by phosphorylated eIF2; first identified as a negative regulator of GCN4 expression; mutations in human ortholog cause fatal brain disease childhood ataxia with central nervous system hypomyelination (CACH); forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0082493"}


id: GO:0004048
data:
  {"annotated_genes":["SJAG_03167"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67114],"is_not":false,"summary":null,"term":"GO:0004048"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-(5-phospho-beta-D-ribosyl)anthranilate + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + anthranilate.","definition_xrefs":["EC:2.4.2.18","RHEA:11768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"anthranilate phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["MetaCyc:PRTRANS-RXN","KEGG_REACTION:R01073"],"synonyms":[{"name":"N-(5-phospho-D-ribosyl)-anthranilate:diphosphate phospho-alpha-D-ribosyltransferase activity","type":"related"},{"name":"PRT","type":"related"},{"name":"anthranilate 5-phosphoribosylpyrophosphate phosphoribosyltransferase activity","type":"related"},{"name":"anthranilate phosphoribosylpyrophosphate phosphoribosyltransferase activity","type":"related"},{"name":"anthranilate-PP-ribose-P phosphoribosyltransferase activity","type":"related"},{"name":"phosphoribosyl-anthranilate diphosphorylase activity","type":"related"},{"name":"phosphoribosyl-anthranilate pyrophosphorylase activity","type":"related"},{"name":"phosphoribosylanthranilate pyrophosphorylase activity","type":"related"},{"name":"phosphoribosylanthranilate transferase activity","type":"related"}],"termid":"GO:0004048","terms_by_termid":{"GO:0004048":null}}


id: MONDO:0030676
data:
  {"annotated_genes":["SJAG_04840"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88961],"is_not":false,"summary":null,"term":"MONDO:0030676"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"parkinsonism-dystonia, infantile","termid":"MONDO:0013150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04840":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"parkinsonism-dystonia 3, childhood-onset","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619738","UMLS:C5676913","MEDGEN:1808365"],"synonyms":[{"name":"PKDYS3","type":"exact"},{"name":"parkinsonism-dystonia 3, childhood-onset","type":"exact"}],"termid":"MONDO:0030676","terms_by_termid":{"MONDO:0030676":null},"xrefs":{"Monarch":{"xref_id":"0030676"}}}


id: PBO:0061680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 98 and 96 precursor","termid":"PBO:0061680"}


id: GO:0048011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by neurotrophin binding to its receptor on the surface of a target cell where the receptor possesses tyrosine kinase activity, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:ceb","GOC:jc","GOC:signaling","GOC:bf","Wikipedia:Trk_receptor","PMID:12065629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"},{"relation_name":"is_a","term_name":"neurotrophin signaling pathway","termid":"GO:0038179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"neurotrophin TRK receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-167021","Reactome:R-HSA-166520","Reactome:R-HSA-187042","Reactome:R-HSA-193704"],"synonyms":[{"name":"TrkA signaling pathway","type":"narrow"},{"name":"TrkB signaling pathway","type":"narrow"},{"name":"TrkC signaling pathway","type":"narrow"},{"name":"tropomyosin-receptor-kinase signaling","type":"exact"}],"termid":"GO:0048011"}


id: MONDO:0007193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary biliary cholangitis","termid":"MONDO:0005388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"primary biliary cholangitis 1","secondary_identifiers":["DOID:0070358","UMLS:C4551595","GARD:15043","OMIM:109720","MEDGEN:1642459"],"synonyms":[{"name":"PBC1","type":"related"},{"name":"Pbc","type":"related"},{"name":"biliary cirrhosis, primary, 1","type":"related"}],"termid":"MONDO:0007193","xrefs":{"Monarch":{"xref_id":"0007193"}}}


id: FYPO:0006060
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the septin ring does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex during vegetative growth","termid":"FYPO:0000930"},{"relation_name":"is_a","term_name":"abnormal protein localization to septin ring","termid":"FYPO:0006059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to septin ring","synonyms":[{"name":"abolished protein localisation to septin ring","type":"exact"},{"name":"abolished protein localization to septin ring during mitotic cell cycle","type":"related"},{"name":"protein absent from septin ring","type":"related"},{"name":"protein localization to septin ring abolished","type":"exact"},{"name":"protein localization to septin ring abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0006060"}


id: MONDO:1012374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"blindness with enlarged globe, non-human animal","termid":"MONDO:1011989"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blindness with enlarged globe, chicken","secondary_identifiers":["OMIA:001367-9031"],"termid":"MONDO:1012374","xrefs":{"Monarch":{"xref_id":"1012374"}}}


id: GO:1902842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of netrin-activated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:24004945","GOC:kmv","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of netrin-activated signaling pathway","termid":"GO:1902841"},{"relation_name":"negatively_regulates","term_name":"netrin-activated signaling pathway","termid":"GO:0038007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of netrin-activated signaling pathway","synonyms":[{"name":"down regulation of netrin signaling pathway","type":"exact"},{"name":"down regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"down regulation of netrin-activated signaling pathway","type":"exact"},{"name":"down regulation of netrin-activated signalling pathway","type":"exact"},{"name":"down regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"down-regulation of netrin signaling pathway","type":"exact"},{"name":"down-regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"down-regulation of netrin-activated signaling pathway","type":"exact"},{"name":"down-regulation of netrin-activated signalling pathway","type":"exact"},{"name":"down-regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"downregulation of netrin signaling pathway","type":"exact"},{"name":"downregulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"downregulation of netrin-activated signaling pathway","type":"exact"},{"name":"downregulation of netrin-activated signalling pathway","type":"exact"},{"name":"downregulation of netrin-mediated signaling pathway","type":"exact"},{"name":"inhibition of netrin signaling pathway","type":"narrow"},{"name":"inhibition of netrin-activated signal transduction pathway","type":"narrow"},{"name":"inhibition of netrin-activated signaling pathway","type":"narrow"},{"name":"inhibition of netrin-activated signalling pathway","type":"narrow"},{"name":"inhibition of netrin-mediated signaling pathway","type":"narrow"},{"name":"negative regulation of netrin signaling pathway","type":"exact"},{"name":"negative regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"negative regulation of netrin-activated signalling pathway","type":"exact"},{"name":"negative regulation of netrin-mediated signaling pathway","type":"exact"}],"termid":"GO:1902842"}


id: PBO:0005198
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary open-angle glaucoma","termid":"PBO:0005198"}


id: GO:1904237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of substrate-dependent cell migration, cell attachment to substrate.","definition_xrefs":["GOC:TermGenie","PMID:25834989","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-substrate adhesion","termid":"GO:0010811"},{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of substrate-dependent cell migration, cell attachment to substrate","termid":"GO:1904235"},{"relation_name":"positively_regulates","term_name":"substrate-dependent cell migration, cell attachment to substrate","termid":"GO:0006931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of substrate-dependent cell migration, cell attachment to substrate","synonyms":[{"name":"activation of substrate-bound cell migration, cell attachment to substrate","type":"narrow"},{"name":"activation of substrate-dependent cell migration, cell attachment to substrate","type":"narrow"},{"name":"positive regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"up regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"up regulation of substrate-dependent cell migration, cell attachment to substrate","type":"exact"},{"name":"up-regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"up-regulation of substrate-dependent cell migration, cell attachment to substrate","type":"exact"},{"name":"upregulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"upregulation of substrate-dependent cell migration, cell attachment to substrate","type":"exact"}],"termid":"GO:1904237"}


id: PBO:0086390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative checkpoint factor in transcription; binds to U2 snRNA and Prp11p; regulates toggling of the U2 snRNA stem II region between different structures; contains two RNA recognition motifs (RRMs)","termid":"PBO:0086390"}


id: PBO:0078150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 28 (pseudogene)","termid":"PBO:0078150"}


id: PBO:0001631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine aspartase (predicted)","termid":"PBO:0001631"}


id: PBO:0038613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like","termid":"PBO:0038613"}


id: GO:1900985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of vindoline.","definition_xrefs":["GOC:yaf","PMID:12228585","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid indole alkaloid biosynthetic process","termid":"GO:0009709"},{"relation_name":"is_a","term_name":"acetate ester biosynthetic process","termid":"GO:1900620"},{"relation_name":"is_a","term_name":"vindoline metabolic process","termid":"GO:1900983"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"vindoline biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5292"],"synonyms":[{"name":"vindoline anabolism","type":"exact"},{"name":"vindoline biosynthesis","type":"exact"},{"name":"vindoline formation","type":"exact"},{"name":"vindoline synthesis","type":"exact"}],"termid":"GO:1900985"}


id: MONDO:0010592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by a polymorphic cutaneous disorder and highly variable anomalies affecting the eyes, teeth, skeleton and the central nervous, urinary, gastrointestinal and cardiovascular systems.","definition_xrefs":["Orphanet:2092"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"excluded_subClassOf","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"excluded_subClassOf","term_name":"mixed dermis disorder","termid":"MONDO:0019294"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"excluded_subClassOf","term_name":"obsolete lens shape anomaly (obsolete MONDO:0020237)","termid":"MONDO:0020237"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focal dermal hypoplasia","secondary_identifiers":["DOID:2120","ICD9:757.39","GARD:6457","NCIT:C84715","NORD:1152","OMIM:305600","MESH:D005489","SCTID:205573006","UMLS:C0016395","MEDGEN:42055","icd11.foundation:683166625"],"synonyms":[{"name":"DHOF","type":"related"},{"name":"FDH","type":"related"},{"name":"Fodh","type":"related"},{"name":"Goltz Gorlin syndrome","type":"related"},{"name":"Goltz syndrome","type":"exact"},{"name":"Goltz-Gorlin syndrome","type":"exact"},{"name":"focal dermal hypoplasia","type":"exact"},{"name":"focal dermal hypoplasia, X-linked dominant","type":"exact"}],"termid":"MONDO:0010592","xrefs":{"Monarch":{"xref_id":"0010592"}}}


id: GO:0043557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the frequency, rate or extent of translation as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation in response to stress","termid":"GO:0043555"},{"relation_name":"part_of","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translation in response to osmotic stress","termid":"GO:0043557"}


id: PBO:0085472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Presumed antiporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; expression of gene is up-regulated in cells exhibiting reduced susceptibility to azoles","termid":"PBO:0085472"}


id: PBO:0055249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2676","termid":"PBO:0055249"}


id: PBO:0080002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 11","termid":"PBO:0080002"}


id: GO:1904780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to centrosome.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:17115027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of protein localization to centrosome","termid":"GO:1904779"},{"relation_name":"negatively_regulates","term_name":"protein localization to centrosome","termid":"GO:0071539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to centrosome","synonyms":[{"name":"down regulation of protein localisation to centrosome","type":"exact"},{"name":"down regulation of protein localization to centrosome","type":"exact"},{"name":"down-regulation of protein localisation to centrosome","type":"exact"},{"name":"down-regulation of protein localization to centrosome","type":"exact"},{"name":"downregulation of protein localisation to centrosome","type":"exact"},{"name":"downregulation of protein localization to centrosome","type":"exact"},{"name":"inhibition of protein localisation to centrosome","type":"narrow"},{"name":"inhibition of protein localization to centrosome","type":"narrow"},{"name":"negative regulation of protein localisation to centrosome","type":"exact"}],"termid":"GO:1904780"}


id: MONDO:1011364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Upper digestive tract disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upper digestive tract disorder, non-human animal","termid":"MONDO:1011364","xrefs":{"Monarch":{"xref_id":"1011364"}}}


id: GO:0035506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of myosin light chain kinase activity.","definition_xrefs":["GOC:go_curators","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of myosin light chain kinase activity (obsolete GO:0035506)","termid":"GO:0035506"}


id: FYPO:0002424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch localization is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle. Cortical patches are normally present at both old and new ends of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cortical patch localization","termid":"FYPO:0001294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal actin cortical patch localization during mitotic interphase","synonyms":[{"name":"normal F-actin patch localization during mitotic interphase","type":"exact"},{"name":"normal actin cortical patch localisation during mitotic interphase","type":"exact"},{"name":"normal actin cortical patch localization at non-growing end during mitotic interphase","type":"related"},{"name":"normal actin cortical patch localization during mitotic interphase during vegetative growth","type":"exact"},{"name":"normal actin cortical patch location during mitotic interphase","type":"related"},{"name":"normal actin patch localization during mitotic interphase","type":"exact"}],"termid":"FYPO:0002424"}


id: GO:0140110
data:
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id: PBO:0091346
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"K/H ion Antiporter, after S. cerevisiae","termid":"PBO:0091346"}


id: GO:0051575
data:
  {"annotated_genes":["SJAG_16460"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97780],"is_not":false,"summary":null,"term":"GO:0051575"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5'-end 2'-deoxyribose-2'-deoxyribonucleotide-DNA = (2E,4S)-4-hydroxypenten-2-al-5-phosphate + a 5'-end 5'-phospho-2'-deoxyribonucleoside-DNA + H+.","definition_xrefs":["PMID:11251121","RHEA:76255","PMID:9614142","PMID:16120966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":1,"genes_by_uniquename":{"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"5'-deoxyribose-5-phosphate lyase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"5'-deoxyribose phosphate activity","type":"exact"},{"name":"dRP lyase activity","type":"broad"},{"name":"dRPase activity","type":"broad"}],"termid":"GO:0051575","terms_by_termid":{"GO:0051575":null}}


id: GO:0046602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the separation of duplicated centrosome components at the beginning of mitosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"regulates","term_name":"mitotic centrosome separation","termid":"GO:0007100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic centrosome separation","termid":"GO:0046602"}


id: PBO:0050344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 46","termid":"PBO:0050344"}


id: PBO:0060523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparaginyl-tRNA synthetase 1 pseudogene 1","termid":"PBO:0060523"}


id: PBO:0071112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 114","termid":"PBO:0071112"}


id: GO:0031876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a secretin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"secretin receptor binding","synonyms":[{"name":"secretin receptor ligand","type":"narrow"}],"termid":"GO:0031876"}


id: GO:0016421
data:
  {"annotated_genes":["SJAG_03313"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003989"}]},"cv_name":"molecular_function","definition":"Catalysis of the joining of a carboxyl group to a molecule that is attached to CoA, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-carbon bonds","termid":"GO:0016885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"CoA carboxylase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0016421","terms_by_termid":{"GO:0003989":null}}


id: MONDO:0003881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An apocrine adenocarcinoma that arises from the sweat glands in the vulva.","definition_xrefs":["NCIT:C40308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apocrine adenocarcinoma","termid":"MONDO:0003214"},{"relation_name":"is_a","term_name":"vulvar adenocarcinoma","termid":"MONDO:0024336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"vulvar apocrine adenocarcinoma","secondary_identifiers":["MEDGEN:384494","UMLS:C2202741","DOID:6448"],"synonyms":[{"name":"apocrine adenocarcinoma of mammalian vulva","type":"exact"},{"name":"mammalian vulva apocrine adenocarcinoma","type":"exact"},{"name":"vulvar apocrine adenocarcinoma","type":"exact"}],"termid":"MONDO:0003881","xrefs":{"Monarch":{"xref_id":"0003881"}}}


id: PBO:0062642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily L member 1","termid":"PBO:0062642"}


id: PBO:0039327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate 15-lipoxygenase type B","termid":"PBO:0039327"}


id: PBO:0088102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ureidoglycolate lyase; converts ureidoglycolate to glyoxylate and urea in the third step of allantoin degradation; expression is sensitive to nitrogen catabolite repression; this enzyme is sometimes referred to 'ureidoglycolate hydrolase' but should not be confused with the Arabidopsis thaliana ureidoglycolate hydrolase enzyme which converts ureidoglycolate to glyoxylate, ammonia and carbon dioxide","termid":"PBO:0088102"}


id: PR:000050507
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A septum-promoting GTP-binding protein 1 (Schizosaccharomyces pombe) that is non-covalently bound to GTP.","definition_xrefs":["PMID:9420333","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septum-promoting GTP-binding protein 1 (Schizosaccharomyces pombe)","termid":"PR:000050506"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spg1/GTP+","pombase_gene_id":"SPAC1565.06c","synonyms":[{"name":"PomBase_original_PRO_term_name: septum-promoting GTP-binding protein 1, GTP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-spg1/GTP+","type":"exact"},{"name":"spg1/GTP+","type":"exact"}],"termid":"PR:000050507"}


id: MONDO:0044976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disease of catalytic activity (obsolete MONDO:0044976)","secondary_identifiers":["SCTID:78548001"],"synonyms":[{"name":"enzyme disorder","type":"exact"},{"name":"enzymopathy","type":"exact"}],"termid":"MONDO:0044976","xrefs":{"Monarch":{"xref_id":"0044976"}}}


id: GO:0120114
data:
  {"annotated_genes":["SJAG_05208","SJAG_00322","SJAG_00058","SJAG_00278","SJAG_03954","SJAG_02295","SJAG_01008","SJAG_04405","SJAG_04538","SJAG_05235","SJAG_04163","SJAG_00498","SJAG_00504","SJAG_00414","SJAG_00643","SJAG_00577","SJAG_02469","SJAG_03279","SJAG_03323","SJAG_04433","SJAG_02304","SJAG_04230","SJAG_01217","SJAG_01327","SJAG_02279","SJAG_01015","SJAG_04529","SJAG_01654","SJAG_03214","SJAG_04880","SJAG_01634","SJAG_01452","SJAG_03894","SJAG_00989","SJAG_01547","SJAG_03070","SJAG_02455","SJAG_03460","SJAG_03983","SJAG_00147","SJAG_03210","SJAG_05240","SJAG_00313","SJAG_04222","SJAG_00474","SJAG_01301","SJAG_04214","SJAG_01870","SJAG_04079","SJAG_04911","SJAG_00531","SJAG_03245","SJAG_02185","SJAG_05009","SJAG_03547","SJAG_01308","SJAG_03369","SJAG_03469","SJAG_01440","SJAG_00539","SJAG_01819","SJAG_03410","SJAG_05195","SJAG_04497","SJAG_04318","SJAG_02843","SJAG_03995"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77569,110493,97714,72531,114866,80678,80685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990726"},{"annotations":[118401,97715,110494,108294,114867,116931,117865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120115"},{"annotations":[91343,77462,75850,74443,78889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034715"},{"annotations":[97880,103235,106495,110956],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0032797"},{"annotations":[81099,78472,78890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034719"},{"annotations":[78886,81183,114355,74440,74906,71923,78570,95884,104642,75849,78469,75763,108897,77460,81096,115267,72224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005685"},{"annotations":[78470,75660,117869,81097,105138,116936,111477,72164,72225,112041,97721,77297,79630,109846,77461,74441,114645,110499,74986,77656,74001,104345,77752,118404,78887,114873,75953,108299,82104,79148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005686"},{"annotations":[78888,81098,72226,76857,74442,78471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005687"},{"annotations":[73389,79431,112042,79114,80675,110500,76059,99924,80165,64154,94996,79347,77463,97083,116862,102555,78177,107783,81768,79143,113123,112605,80282,81124,107828,118406,62910,74444,72227,72530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046540"},{"annotations":[72223,70000,108301,110501,78468,116938,119841,78885,81095,117871,77812,80281,74216,77459,114875,79113,118407,97723,74439,104638,112043,99309,102556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005682"},{"annotations":[79346,80681,63475,73467,80674,72529,62909,81766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005688"}]},"cv_name":"cellular_component","definition":"A protein complex containing members of the Like-Sm family of proteins, which includes both the Sm proteins and the Lsm proteins, and which generally form hexameric or heptameric ring structures which bind to RNA. While some of these ring complexes may form independently of RNA, many only form in association with their target RNA. In addition to Lsm-family proteins, many of these complexes contain additional protein members. Members of this family of complexes include the snRNPs which comprise the majority of the spliceosome. Others are involved in the 5' to 3' degradation pathways of mRNAs in the cytoplasm and of unspliced transcripts in the nucleus, as well as other diverse roles.","definition_xrefs":["GOC:krc","PMID:19121818","GOC:bhm","PMID:27627834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":67,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00278":null,"SJAG_00313":null,"SJAG_00322":null,"SJAG_00414":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00531":null,"SJAG_00539":null,"SJAG_00577":null,"SJAG_00643":null,"SJAG_00989":null,"SJAG_01008":null,"SJAG_01015":null,"SJAG_01217":null,"SJAG_01301":null,"SJAG_01308":null,"SJAG_01327":null,"SJAG_01440":null,"SJAG_01452":null,"SJAG_01547":null,"SJAG_01634":null,"SJAG_01654":null,"SJAG_01819":null,"SJAG_01870":null,"SJAG_02185":null,"SJAG_02279":null,"SJAG_02295":null,"SJAG_02304":null,"SJAG_02455":null,"SJAG_02469":null,"SJAG_02843":null,"SJAG_03070":null,"SJAG_03210":null,"SJAG_03214":null,"SJAG_03245":null,"SJAG_03279":null,"SJAG_03323":null,"SJAG_03369":null,"SJAG_03410":null,"SJAG_03460":null,"SJAG_03469":null,"SJAG_03547":null,"SJAG_03894":null,"SJAG_03954":null,"SJAG_03983":null,"SJAG_03995":null,"SJAG_04079":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04222":null,"SJAG_04230":null,"SJAG_04318":null,"SJAG_04405":null,"SJAG_04433":null,"SJAG_04497":null,"SJAG_04529":null,"SJAG_04538":null,"SJAG_04880":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05195":null,"SJAG_05208":null,"SJAG_05235":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Sm-like protein family complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0120114","terms_by_termid":{"GO:0005682":null,"GO:0005685":null,"GO:0005686":null,"GO:0005687":null,"GO:0005688":null,"GO:0032797":null,"GO:0034715":null,"GO:0034719":null,"GO:0046540":null,"GO:0120115":null,"GO:1990726":null}}


id: FYPO:0004335
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another does not occur during a cellular response to hydrogen peroxide. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah","PMID:22139357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction during cellular response to rapamycin","termid":"FYPO:0003425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished protein-protein interaction during cellular response to hydrogen peroxide","synonyms":[{"name":"abolished protein binding cellular response to hydrogen peroxide","type":"exact"},{"name":"abolished protein-protein interaction during cellular response to H2O2","type":"exact"},{"name":"protein-protein interaction abolished during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0004335"}


id: GO:0045766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases angiogenesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of angiogenesis","termid":"GO:0045765"},{"relation_name":"is_a","term_name":"positive regulation of vasculature development","termid":"GO:1904018"},{"relation_name":"positively_regulates","term_name":"angiogenesis","termid":"GO:0001525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of angiogenesis","synonyms":[{"name":"activation of angiogenesis","type":"narrow"},{"name":"stimulation of angiogenesis","type":"narrow"},{"name":"up regulation of angiogenesis","type":"exact"},{"name":"up-regulation of angiogenesis","type":"exact"},{"name":"upregulation of angiogenesis","type":"exact"}],"termid":"GO:0045766"}


id: PBO:0040377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk subunit F6","termid":"PBO:0040377"}


id: GO:0032800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor biosynthetic process (obsolete GO:0032800)","synonyms":[{"name":"receptor anabolism","type":"exact"},{"name":"receptor biosynthesis","type":"exact"},{"name":"receptor formation","type":"exact"},{"name":"receptor synthesis","type":"exact"}],"termid":"GO:0032800"}


id: GO:0141150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of nitric oxide-cGMP mediated signal transduction.","definition_xrefs":["PMID:14615391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nitric oxide mediated signal transduction","termid":"GO:0010750"},{"relation_name":"is_a","term_name":"positive regulation of cGMP-mediated signaling","termid":"GO:0010753"},{"relation_name":"is_a","term_name":"regulation of nitric oxide-cGMP mediated signal transduction","termid":"GO:0141149"},{"relation_name":"positively_regulates","term_name":"nitric oxide-cGMP-mediated signaling","termid":"GO:0038060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nitric oxide-cGMP mediated signal transduction","termid":"GO:0141150"}


id: PBO:0029714
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_absent_from_cell_during_vegetative_growth","termid":"PBO:0029714"}


id: GO:0018159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The oxidation of peptidyl-L-methionine to peptidyl-L-methionine sulfone.","definition_xrefs":["RESID:AA0251"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-methionine oxidation (obsolete GO:0018159)","termid":"GO:0018159"}


id: PBO:0029832
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_stubby_vegetative_cell","termid":"PBO:0029832"}


id: GO:0140813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: urate(out) + anion (in) = urate (in) + anion (out).","definition_xrefs":["PMID:12024214","PMID:18411268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transporter activity","termid":"GO:0008509"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"urate:monoatomic anion antiporter activity","synonyms":[{"name":"urate:anion antiporter activity","type":"broad"},{"name":"urate:organic anion antiporter activity","type":"narrow"}],"termid":"GO:0140813"}


id: PBO:0091850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA primary transcript (predicted)","termid":"PBO:0091850"}


id: PBO:0068371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 157","termid":"PBO:0068371"}


id: PATO:0000850
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000850 relative auditory ability (obsolete PATO:0000850)","termid":"PATO:0000850"}


id: GO:2001147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to camalexin.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"camalexin binding","synonyms":[{"name":"3-(1,3-thiazol-2-yl)-1H-indole binding","type":"exact"}],"termid":"GO:2001147"}


id: GO:0033555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a multicellular organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organismal response to stress","termid":"GO:0033555"}


id: PBO:0051492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily member 9B","termid":"PBO:0051492"}


id: PBO:0031905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved transmembrane protein (predicted)","termid":"PBO:0031905"}


id: MOD:01164
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a compound containing a riboflavin phosphate (flavin mononucleotide, FMN) group through a phosphodiester bond.","definition_xrefs":["Unimod:442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FMN modified residue","termid":"MOD:00896"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin-phosphoryl","synonyms":[{"name":"FMN","type":"related"},{"name":"O3-(riboflavin phosphoryl)","type":"related"}],"termid":"MOD:01164"}


id: PBO:0048500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphodiester phosphodiesterase 1","termid":"PBO:0048500"}


id: PBO:0051037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF like family receptor 1","termid":"PBO:0051037"}


id: GO:0004699
data:
  {"annotated_genes":["SJAG_01787"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92645],"is_not":false,"summary":null,"term":"GO:0004699"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein. This reaction is activated by diacylglycerol but not by calcium.","definition_xrefs":["PMID:34834162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diacylglycerol-dependent serine/threonine kinase activity","termid":"GO:0004697"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01787":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0140096","GO:0004672","GO:0016301"],"is_obsolete":false,"name":"diacylglycerol-dependent, calcium-independent serine/threonine kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5607740"],"synonyms":[{"name":"atypical protein kinase C activity","type":"related"},{"name":"calcium-independent PKC activity","type":"exact"},{"name":"novel protein kinase C activity","type":"exact"}],"termid":"GO:0004699","terms_by_termid":{"GO:0004699":null}}


id: GO:0009185
data:
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id: PBO:0061343
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 1","termid":"PBO:0061343"}


id: PBO:0088830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rix1 complex Armadillo-type fold Rix1","termid":"PBO:0088830"}


id: PBO:0070900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 8","termid":"PBO:0070900"}


id: GO:0075055
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id: SO:0000090
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from plastid sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"plastid_sequence","termid":"SO:0000740"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastid_gene","synonyms":[{"name":"plastid gene","type":"exact"}],"termid":"SO:0000090"}


id: PBO:0053012
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 2","termid":"PBO:0053012"}


id: FYPO:0007653
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id: MONDO:0017825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-functioning pituitary adenoma","termid":"MONDO:0019613"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silent pituitary adenoma","secondary_identifiers":["ICD10CM:D35.2","MEDGEN:90850","UMLS:C0338078","Orphanet:314786","GARD:21392"],"termid":"MONDO:0017825","xrefs":{"Monarch":{"xref_id":"0017825"}}}


id: PBO:0042583
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich DPF motif domain containing 1","termid":"PBO:0042583"}


id: SO:0000585
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"snoRNA that is associated with guiding methylation of nucleotides. It contains two short conserved sequence motifs: C (RUGAUGA) near the 5-prime end and D (CUGA) near the 3-prime end.","direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_encoding","termid":"SO:0000578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_D_box_snoRNA_encoding","synonyms":[{"name":"C/D box snoRNA encoding","type":"exact"}],"termid":"SO:0000585"}


id: MONDO:0020047
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  {"annotated_genes":["SJAG_00863","SJAG_04622","SJAG_02680"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014744"},{"annotations":[87253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014557"},{"annotations":[88286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044720"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00863":null,"SJAG_02680":null,"SJAG_04622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive syndromic cerebellar ataxia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:19416","Orphanet:98099","MEDGEN:1843251","UMLS:C5681516"],"termid":"MONDO:0020047","terms_by_termid":{"MONDO:0014557":null,"MONDO:0014744":null,"MONDO:0044720":null},"xrefs":{"Monarch":{"xref_id":"0020047"}}}


id: MONDO:0016089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Krabbe disease","termid":"MONDO:0009499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005244","MONDO:0005559","MONDO:0005328","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"infantile Krabbe disease","secondary_identifiers":["icd11.foundation:999546344","SCTID:238030005","MEDGEN:148270","Orphanet:206436","UMLS:C0751273","NANDO:1200075","GARD:20343","NANDO:2201216"],"synonyms":[{"name":"Krabbe disease, classic form","type":"exact"},{"name":"Krabbe disease, early-onset","type":"exact"},{"name":"early onset Krabbe disease","type":"exact"},{"name":"early symptomatic Krabbe disease","type":"exact"},{"name":"early-onset Krabbe disease","type":"exact"},{"name":"infantile onset Krabbe disease","type":"exact"},{"name":"infantile-onset Krabbe disease","type":"exact"}],"termid":"MONDO:0016089","xrefs":{"Monarch":{"xref_id":"0016089"}}}


id: PBO:0081030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 11B","termid":"PBO:0081030"}


id: GO:0030234
data:
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id: GO:0004741
data:
  {"annotated_genes":["SJAG_03310"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77926],"is_not":false,"summary":null,"term":"GO:0004741"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-seryl-[pyruvate dehydrogenase E1 alpha subunit] + H2O = L-seryl-[pyruvate dehydrogenase E1 alpha subunit] + phosphate.","definition_xrefs":["EC:3.1.3.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase activity","termid":"GO:0004722"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03310":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0140096","GO:0003824","GO:0004721"],"is_obsolete":false,"name":"[pyruvate dehydrogenase (acetyl-transferring)]-phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-204169","MetaCyc:3.1.3.43-RXN","RHEA:12669","GO:0019906"],"synonyms":[{"name":"[pyruvate dehydrogenase (lipoamide)] phosphatase activity","type":"exact"},{"name":"[pyruvate dehydrogenase (lipoamide)] phosphatase, intrinsic catalyst activity","type":"exact"},{"name":"pyruvate dehydrogenase (lipoamide) phosphatase activity","type":"exact"}],"termid":"GO:0004741","terms_by_termid":{"GO:0004741":null}}


id: PBO:0065071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prickle planar cell polarity protein 2","termid":"PBO:0065071"}


id: FYPO:0000960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing ethanol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002057","FYPO:0002058","FYPO:0002060","FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on ethanol","synonyms":[{"name":"normal cell population growth in presence of ethanol","type":"exact"},{"name":"normal cell population growth on ethanol","type":"exact"},{"name":"normal cell population growth on to ethyl alcohol","type":"exact"},{"name":"normal cellular response to ethanol","type":"related"},{"name":"normal vegetative cell population growth on ethanol","type":"exact"}],"termid":"FYPO:0000960"}


id: MOD:00708
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds oxygen atoms to a sulfur atom of L-cysteine residue without removing hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated residue","termid":"MOD:00680"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"sulfur oxygenated L-cysteine","synonyms":[{"name":"SOxyCys","type":"exact"}],"termid":"MOD:00708"}


id: PBO:0053882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1162","termid":"PBO:0053882"}


id: MONDO:0009957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Reese retinal dysplasia","secondary_identifiers":["UMLS:C1849450","MEDGEN:341456","OMIM:266400","MESH:C564854"],"synonyms":[{"name":"Reese retinal dysplasia","type":"exact"}],"termid":"MONDO:0009957","xrefs":{"Monarch":{"xref_id":"0009957"}}}


id: GO:0099500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of the membrane of a vesicle with the plasma membrane, thereby releasing its contents into the extracellular space.","definition_xrefs":["ISBN:0071120009","GOC:bc","GOC:aruk","PMID:18618940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"vesicle fusion to plasma membrane","termid":"GO:0099500"}


id: PBO:0113155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone variant H2A.Z; exchanged for histone H2A in nucleosomes by the SWR1 complex; involved in transcriptional regulation through prevention of the spread of silent heterochromatin; Htz1p-containing nucleosomes facilitate RNA Pol II passage by affecting correct assembly and modification status of RNA Pol II elongation complexes and by favoring efficient nucleosome remodeling","termid":"PBO:0113155"}


id: PBO:0045388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP9 antisense RNA 1","termid":"PBO:0045388"}


id: PBO:0052642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 10","termid":"PBO:0052642"}


id: PBO:0039507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 27","termid":"PBO:0039507"}


id: GO:0090037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of a series of reactions, mediated by the intracellular serine/threonine kinase protein kinase C, which occurs as a result of a single trigger reaction or compound.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein kinase C signaling","termid":"GO:0090036"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"protein kinase C signaling","termid":"GO:0070528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein kinase C signaling","synonyms":[{"name":"positive regulation of protein kinase C signaling cascade","type":"related"},{"name":"positive regulation of protein kinase C signalling cascade","type":"exact"}],"termid":"GO:0090037"}


id: MONDO:0012633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malaria (obsolete MONDO:0012633)","termid":"MONDO:0012633","xrefs":{"Monarch":{"xref_id":"0012633"}}}


id: PBO:0082847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copper-binding protein of the mitochondrial intermembrane space; evolutionarily conserved; may be involved in delivering copper from the matrix to the cytochrome c oxidase complex; contains a twin CX9C motif","termid":"PBO:0082847"}


id: PBO:0069188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 442, pseudogene","termid":"PBO:0069188"}


id: MONDO:0016959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 8","termid":"MONDO:0016929"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome 8","secondary_identifiers":["UMLS:C5679703","MEDGEN:1826035","GARD:20879","icd11.foundation:397762525","Orphanet:262896"],"synonyms":[{"name":"partial duplication of chromosome 8q","type":"exact"},{"name":"partial duplication of the long arm of chromosome type 8","type":"exact"},{"name":"partial trisomy of chromosome 8q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome 8","type":"exact"}],"termid":"MONDO:0016959","xrefs":{"Monarch":{"xref_id":"0016959"}}}


id: PBO:0018038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate transmembrane transporter Liz1","termid":"PBO:0018038"}


id: FYPO:0001801
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A viability phenotype in which a cell is unable to survive at a high temperature at which wild-type cells survive.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable cell at high temperature (obsolete FYPO:0001801)","synonyms":[{"name":"lethal in cell at high temperature","type":"exact"}],"termid":"FYPO:0001801"}


id: RO:0002339
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"This relationship holds between p and l when p is a transport or localization process in which the outcome is to move some cargo c from a an initial location to some destination l.","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_transport_to_from_or_in","termid":"RO:0002344"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_target_end_location","termid":"RO:0002339"}


id: FYPO:0001894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype in which asci that contain more or fewer than four spores form following conjugation and subsequent sporulation.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000121","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of ascus with more or fewer than four spores","synonyms":[{"name":"abnormal ascospore formation resulting in formation of asci with more or fewer than four spores","type":"exact"},{"name":"abnormal spore number","type":"exact"},{"name":"abnormal sporulation resulting in formation of asci with more or fewer than four spores","type":"exact"}],"termid":"FYPO:0001894"}


id: GO:0004648
data:
  {"annotated_genes":["SJAG_02791"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81368],"is_not":false,"summary":null,"term":"GO:0004648"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-serine + 2-oxoglutarate = 3-phosphonooxypyruvate + L-glutamate.","definition_xrefs":["EC:2.6.1.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02791":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016769","GO:0003824"],"is_obsolete":false,"name":"O-phospho-L-serine:2-oxoglutarate aminotransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:PSERTRANSAM-RXN","RHEA:14329","Reactome:R-HSA-977333","GO:0004646"],"synonyms":[{"name":"3-O-phospho-L-serine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"3-phosphoserine aminotransferase activity","type":"related"},{"name":"3PHP transaminase activity","type":"related"},{"name":"L-phosphoserine aminotransferase activity","type":"related"},{"name":"PSAT activity","type":"related"},{"name":"PdxC","type":"related"},{"name":"SerC","type":"related"},{"name":"hydroxypyruvic phosphate--glutamic transaminase activity","type":"related"},{"name":"phosphohydroxypyruvate transaminase activity","type":"related"},{"name":"phosphohydroxypyruvic--glutamic transaminase activity","type":"related"},{"name":"phosphoserine aminotransferase activity","type":"broad"},{"name":"phosphoserine transaminase activity","type":"broad"}],"termid":"GO:0004648","terms_by_termid":{"GO:0004648":null}}


id: MONDO:0012823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"colorectal cancer","termid":"MONDO:0005575"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer, susceptibility to, 7","secondary_identifiers":["UMLS:C2677120","MEDGEN:394209","OMIM:612232"],"synonyms":[{"name":"CRCS7","type":"exact"},{"name":"colorectal cancer, susceptibility to, 7","type":"exact"},{"name":"colorectal cancer, susceptibility to, on chromosome 11","type":"related"}],"termid":"MONDO:0012823","xrefs":{"Monarch":{"xref_id":"0012823"}}}


id: FYPO:0008285
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 5-diphospho-1D-myo-inositol 1,2,3,4,6-pentakisphosphate (5-IP7) is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular myo-inositol level","termid":"FYPO:0008284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular 5-IP7 level","termid":"FYPO:0008285"}


id: PBO:0041978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC18 antisense RNA 1","termid":"PBO:0041978"}


id: MONDO:0010362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign form of phosphorylase kinase deficiency caused by variants in PHKA1, characterized by exercise intolerance, myalgia, muscle cramps, myoglobinuria, and progressive muscle weakness.","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"glycogen storage disease IXd","secondary_identifiers":["UMLS:C1845151","MESH:C564485","NANDO:2201167","OMIM:300559","DOID:0111040","Orphanet:715","MEDGEN:335112","GARD:3858","NANDO:1200830"],"synonyms":[{"name":"GSD IXd","type":"exact"},{"name":"GSD Vb","type":"related"},{"name":"GSD due to muscle phosphorylase kinase deficiency","type":"exact"},{"name":"GSD type 9D","type":"exact"},{"name":"GSD type IXd","type":"exact"},{"name":"GSD9D","type":"exact"},{"name":"PHKA1 glycogen storage disease","type":"exact"},{"name":"PHKA1-related glycogen storage disease type IX","type":"exact"},{"name":"glycogen storage disease caused by mutation in PHKA1","type":"exact"},{"name":"glycogen storage disease due to muscle phosphorylase kinase deficiency","type":"exact"},{"name":"glycogen storage disease type 9D","type":"exact"},{"name":"glycogen storage disease type IXd","type":"exact"},{"name":"glycogen storage disease, type IXd","type":"related"},{"name":"glycogenosis due to muscle phosphorylase kinase deficiency","type":"exact"},{"name":"glycogenosis type 9D","type":"exact"},{"name":"glycogenosis type IXd","type":"exact"},{"name":"muscle glycogenosis, X-linked","type":"related"},{"name":"muscle glycogenosis, X-linked recessive","type":"exact"},{"name":"muscle phosphorylase kinase deficiency","type":"exact"},{"name":"muscular phosphorylase kinase deficiency","type":"related"}],"termid":"MONDO:0010362","xrefs":{"Monarch":{"xref_id":"0010362"}}}


id: PBO:0029591
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_cellular_response_to_heat","termid":"PBO:0029591"}


id: PBO:0068926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 169, pseudogene","termid":"PBO:0068926"}


id: MONDO:0001946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Abnormally high level of estrogen.","definition_xrefs":["NCIT:P378"],"gene_count":0,"genotype_count":0,"name":"obsolete hyperestrogenism (obsolete MONDO:0001946)","secondary_identifiers":["ICD10CM:E28.0","SCTID:37295009","DOID:14336","ICD10WHO:E28.0","ICD9:256.0","NANDO:2200379"],"synonyms":[{"name":"estrogen Excess","type":"related"},{"name":"hyperestrogenism","type":"exact"}],"termid":"MONDO:0001946","xrefs":{"Monarch":{"xref_id":"0001946"}}}


id: GO:0072376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A sequential series of modifications to a set of proteins where the product of one reaction catalyzes the following reaction, ultimately leading to the generation of a mature protein. Modifications typically include proteolysis or covalent modification, and may also include binding events.","definition_xrefs":["GOC:mah","GOC:pde","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"protein activation cascade","synonyms":[{"name":"protein activation pathway","type":"exact"},{"name":"protein activitory cascade","type":"exact"}],"termid":"GO:0072376"}


id: GO:0016923
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Ligand dependent interaction with the thyroid hormone receptor.","definition_xrefs":["PMID:7776974"],"gene_count":0,"genotype_count":0,"name":"obsolete ligand-dependent thyroid hormone receptor interactor activity (obsolete GO:0016923)","synonyms":[{"name":"TRIP4","type":"related"},{"name":"ligand-dependent thyroid hormone receptor interactor activity","type":"exact"}],"termid":"GO:0016923"}


id: PBO:0030037
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_minichromosome_loss_during_meiotic_cell_cycle","termid":"PBO:0030037"}


id: GO:0018206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-methionine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-methionine modification","termid":"GO:0018206"}


id: MONDO:0001170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe or complete loss of motor function on one side of the body. This condition is usually caused by brain diseases that are localized to the cerebral hemisphere opposite to the side of weakness. Less frequently, brain stem lesions; cervical spinal cord diseases; peripheral nervous system diseases; and other conditions may manifest as hemiplegia. The term hemiparesis (see paresis) refers to mild to moderate weakness involving one side of the body.","definition_xrefs":["MESH:D006429"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"central nervous system disorder","termid":"MONDO:0002602"},{"relation_name":"is_a","term_name":"palsy","termid":"MONDO:0006496"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemiplegia","secondary_identifiers":["MEDGEN:9196","SCTID:1593000","UMLS:C0018991","DOID:10969","EFO:0009453","icd11.foundation:1641958762","ICD9:343.4"],"synonyms":[{"name":"infantile hemiplegia","type":"exact"},{"name":"postnatal infantile hemiplegia","type":"exact"}],"termid":"MONDO:0001170","xrefs":{"Monarch":{"xref_id":"0001170"}}}


id: PBO:0087805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tap42p-interacting protein; negative regulator of the TORC1 signaling pathway that activates the type 2A-related phosphatase Sit4p by binding and antagonizing Tap42p, a SIT4 inhibitor; proposed to be part of a feedback loop to amplify Sit4p activity when TORC1 is inactivated; protein abundance increases in response to DNA replication stress","termid":"PBO:0087805"}


id: GO:0090056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving chlorophyll.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tetrapyrrole metabolic process","termid":"GO:1901401"},{"relation_name":"regulates","term_name":"chlorophyll metabolic process","termid":"GO:0015994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"regulation of chlorophyll metabolic process","termid":"GO:0090056"}


id: GO:0051356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events during equilibrioception required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual input plays an important role in the ability of an organism to perceive its orientation with respect to gravity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visual perception","termid":"GO:0007601"},{"relation_name":"part_of","term_name":"equilibrioception","termid":"GO:0050957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"visual perception involved in equilibrioception","synonyms":[{"name":"equilibrioception by visual perception","type":"narrow"},{"name":"perception of orientation with respect to gravity by visual perception","type":"exact"},{"name":"visual perception during equilibrioception","type":"related"}],"termid":"GO:0051356"}


id: MONDO:0009028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare syndrome characterized by poorly mineralized calvarium, facial dysmorphism, vertebral abnormalities and absent clavicles.","definition_xrefs":["Orphanet:1512"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Crane-Heise syndrome","secondary_identifiers":["MEDGEN:387847","SCTID:715991005","MESH:C536452","OMIM:218090","UMLS:C1857532","GARD:8428"],"synonyms":[{"name":"Crane-Heise syndrome","type":"exact"},{"name":"cleft Lip/palate, agenesis of clavicles and cervical vertebrae, and talipes equinovarus","type":"related"}],"termid":"MONDO:0009028","xrefs":{"Monarch":{"xref_id":"0009028"}}}


id: FYPO:0005905
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which contractile ring assembly begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","definition_xrefs":["PMID:19570908","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actomyosin contractile ring assembly","termid":"FYPO:0001368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal onset of actomyosin contractile ring assembly","synonyms":[{"name":"normal onset of actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"normal onset of actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"normal onset of actomyosin contractile ring formation","type":"related"},{"name":"normal onset of contractile ring assembly","type":"exact"},{"name":"normal onset of cytokinetic contractile ring assembly","type":"exact"},{"name":"normal onset of cytokinetic ring assembly","type":"related"},{"name":"normal onset of cytokinetic ring formation","type":"related"},{"name":"normal onset of mitotic contractile ring assembly","type":"exact"},{"name":"normal timing of actomyosin contractile ring assembly","type":"related"}],"termid":"FYPO:0005905"}


