# terms

id: GO:0010702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency or extent of the breakdown of tissues; usually, if not always, accompanied by cell death.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:rl","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histolysis (obsolete GO:0010702)","termid":"GO:0010702"}


id: GO:0102667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-O-(indol-3-ylacetyl)-beta-D-glucose + H2O = H+ + indole-3-acetate + beta-D-glucose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete indole-3-acetyl-beta-1-D-glucose hydrolase activity (obsolete GO:0102667)","termid":"GO:0102667"}


id: PBO:0082574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin synthase II; catalyzes transfer of N-acetylglucosamine (GlcNAc) to chitin upon activation of zymogenic form; required for chitin synthesis in the primary septum during cytokinesis; localization regulated by Cdk1p during mitosis; phosphorylation by Dbf2p kinase regulates its dynamics and chitin synthesis during cytokinesis","termid":"PBO:0082574"}


id: PBO:0077060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin type 1 domain containing 7A","termid":"PBO:0077060"}


id: GO:0032311
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stable heterodimer of angiogenin and placental ribonuclease inhibitor; interaction between angiogenin and PRI prevents angiogenin binding to its receptor to stimulate angiogenesis.","definition_xrefs":["PMID:3470787","PMID:2706246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"angiogenin-PRI complex","synonyms":[{"name":"angiogenin-placental ribonuclease inhibitor complex","type":"exact"}],"termid":"GO:0032311"}


id: PBO:0028274
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_vesicles_present_in_increased_numbers","termid":"PBO:0028274"}


id: GO:0052176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving glucans within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of host glucan (obsolete GO:0052176)","termid":"GO:0052176"}


id: PBO:0065800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB1A, member RAS oncogene family","termid":"PBO:0065800"}


id: PBO:0088626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dubious, SPNCRNA.1420 syntenic position","termid":"PBO:0088626"}


id: MONDO:0009553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Plasmodium falciparum blood infection level (obsolete MONDO:0009553)","secondary_identifiers":["OMIM:248310"],"synonyms":[{"name":"Pfbi","type":"related"},{"name":"Plasmodium falciparum blood infection level","type":"exact"},{"name":"Plasmodium falciparum parasitemia","type":"related"},{"name":"malaria, intensity of infection","type":"exact"}],"termid":"MONDO:0009553","xrefs":{"Monarch":{"xref_id":"0009553"}}}


id: FYPO:0002144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of threonine residues N-terminal to proline residues (i.e. in Thr-Pro sequences) occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein threonine phosphorylation at Thr-Pro site during vegetative growth (obsolete FYPO:0002144)","synonyms":[{"name":"increased protein threonine phosphorylation at TP site during vegetative growth","type":"exact"},{"name":"increased protein threonine phosphorylation at Thr-Pro site during mitotic cell cycle","type":"related"},{"name":"increased protein threonine phosphorylation at threonine-proline site during vegetative growth","type":"exact"}],"termid":"FYPO:0002144"}


id: GO:0004969
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with histamine to initiate a change in cell activity. Histamine is a physiologically active amine, found in plant and animal tissue and released from mast cells as part of an allergic reaction in humans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled amine receptor activity","termid":"GO:0008227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"histamine receptor activity","termid":"GO:0004969"}


id: PBO:0003874
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.31","termid":"PBO:0003874"}


id: MONDO:0958348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare closed dysraphism with terminal stalk characterized by persistent rudimentary spinal cord below conus. It contains non-functional neural tissue and is typically isolated. The diagnostic is suggested by attenuated conus without fat, further confirmed by pathological analysis (glioneuronal core with ependyma-lined lumen, nerve roots, and dorsal root ganglia). Differential diagnostic with intraoperative neurophysiological monitoring is mandatory as neuroimaging fails to distinguish it from functional conus.","definition_xrefs":["Orphanet:645334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysraphism with stalk","termid":"MONDO:0958259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"retained medullary cord","secondary_identifiers":["MEDGEN:1853139","UMLS:C5816811"],"termid":"MONDO:0958348","xrefs":{"Monarch":{"xref_id":"0958348"}}}


id: MONDO:0000236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A anthrax infection that involves the oropharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"gastrointestinal anthrax","termid":"MONDO:0001701"},{"relation_name":"is_a","term_name":"gastrointestinal anthrax","termid":"MONDO:0001701"},{"relation_name":"is_a","term_name":"disorder of pharynx","termid":"MONDO:0020592"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"oropharyngeal anthrax","secondary_identifiers":["DOID:0050059"],"synonyms":[{"name":"oropharynx anthrax infection","type":"exact"}],"termid":"MONDO:0000236","xrefs":{"Monarch":{"xref_id":"0000236"}}}


id: PBO:0043123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium and integrin binding 1","termid":"PBO:0043123"}


id: FYPO:0001086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a glucosyltransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal glucosyltransferase activity","termid":"FYPO:0001086"}


id: GO:0032280
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse that lacks an electron dense postsynaptic specialization. In vertebtrates, these occur primarily on dendrite shafts and neuronal cell bodies and involve persynapses containing clusters of predominantly flattened or elongated vesicles and are typically inhibitory.","definition_xrefs":["GOC:dgh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron to neuron synapse","termid":"GO:0098984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"symmetric synapse","synonyms":[{"name":"Gray's type II synapse","type":"exact"}],"termid":"GO:0032280"}


id: MONDO:0000645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the fallopian tube. Representative examples include papilloma, adenofibroma, and leiomyoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign female reproductive system neoplasm","termid":"MONDO:0000624"},{"relation_name":"is_a","term_name":"fallopian tube neoplasm","termid":"MONDO:0021092"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fallopian tube benign neoplasm","secondary_identifiers":["MEDGEN:83416","Orphanet:180237","UMLS:C0346190","NCIT:C4517","SCTID:92100009","DOID:0060111","MedDRA:10053865"],"synonyms":[{"name":"benign fallopian tube neoplasm","type":"exact"},{"name":"benign fallopian tube tumor","type":"exact"},{"name":"benign fallopian tube tumour","type":"exact"},{"name":"benign neoplasm of fallopian tube","type":"exact"},{"name":"benign neoplasm of the fallopian tube","type":"exact"},{"name":"benign tumor of fallopian tube","type":"exact"},{"name":"benign tumor of fallopian tubes","type":"exact"},{"name":"benign tumor of the fallopian tube","type":"exact"},{"name":"benign tumour of fallopian tube","type":"exact"},{"name":"benign tumour of fallopian tubes","type":"exact"},{"name":"benign tumour of the fallopian tube","type":"exact"},{"name":"fallopian tube benign neoplasm","type":"exact"},{"name":"fallopian tube neoplasm, benign","type":"exact"},{"name":"fallopian tube tumor, benign","type":"exact"}],"termid":"MONDO:0000645","xrefs":{"Monarch":{"xref_id":"0000645"}}}


id: MONDO:1012632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any difference of sexual differentiation that occurs in Japanese medaka and is characterized by male sex reversal with female karyotype (XX).","definition_xrefs":["PMID:20424640","OMIA:000901-8090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"difference of sexual differentiation, non-human animal","termid":"MONDO:0700105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XX difference of sexual development, Japanese medaka","termid":"MONDO:1012632","xrefs":{"Monarch":{"xref_id":"1012632"}}}


id: MOD:01131
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'phos dGuanosyl","termid":"MOD:01131"}


id: GO:0031610
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The subunits of the regulatory particle that directly associate with the core complex of a proteasome located in the nucleus of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome regulatory particle, base subcomplex","termid":"GO:0008540"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear proteasome regulatory particle","termid":"GO:0031598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear proteasome regulatory particle, base subcomplex","termid":"GO:0031610"}


id: MONDO:0021668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder involving pain (obsolete MONDO:0021668)","secondary_identifiers":["SCTID:373673007","DOID:0060164"],"synonyms":[{"name":"pain disorder","type":"exact"}],"termid":"MONDO:0021668","xrefs":{"Monarch":{"xref_id":"0021668"}}}


id: PATO:0000944
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a sharp or tapered end or point.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sharpness","synonyms":[{"name":"apiculate","type":"exact"}],"termid":"PATO:0000944"}


id: PATO:0001207
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001207 absolute compatability (obsolete PATO:0001207)","termid":"PATO:0001207"}


id: PBO:0013470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double strand break localizing protein Dbl6","termid":"PBO:0013470"}


id: PBO:0053071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LBH domain containing 2","termid":"PBO:0053071"}


id: MONDO:0006927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the family rickettsiaceae.","definition_xrefs":["MESH:D012288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rickettsiosis","termid":"MONDO:0006956"},{"relation_name":"is_a","term_name":"gram-negative bacterial infections","termid":"MONDO:0021678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rickettsiaceae infectious disease","secondary_identifiers":["EFO:1001128"],"synonyms":[{"name":"Rickettsiaceae caused disease or disorder","type":"exact"},{"name":"Rickettsiaceae disease or disorder","type":"exact"},{"name":"Rickettsiaceae infection","type":"related"},{"name":"infection, Rickettsiaceae","type":"related"},{"name":"infections, Rickettsiaceae","type":"related"},{"name":"rickettsialpox","type":"related"}],"termid":"MONDO:0006927","xrefs":{"Monarch":{"xref_id":"0006927"}}}


id: PBO:0030671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_heterochromatin_during_vegetative_growth","termid":"PBO:0030671"}


id: MOD:01743
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Proteome Sciences TMT6plex-128 reagent acylated residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"TMT6plex-128 reporter+balance reagent acylated residue","termid":"MOD:01736"},{"relation_name":"derives_from","term_name":"cysTMT6plex-128 reporter+balance reagent cysteine disulfide","termid":"MOD:01825"},{"relation_name":"is_a","term_name":"TMT6plex reporter fragment","termid":"MOD:01716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-128 reporter fragment","synonyms":[{"name":"2,6-dimethyl-1-methylidenepiperidinium","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"},{"name":"cysTMT6plex-128 reporter fragment","type":"exact"}],"termid":"MOD:01743"}


id: PBO:0051362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3-15","termid":"PBO:0051362"}


id: GO:0039011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a pronephric nephron proximal tubule are generated and organized. A pronephric nephron tubule is an epithelial tube that is part of the pronephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pronephric nephron tubule morphogenesis","termid":"GO:0039008"},{"relation_name":"is_a","term_name":"proximal tubule morphogenesis","termid":"GO:0072158"},{"relation_name":"part_of","term_name":"pronephric proximal tubule development","termid":"GO:0035776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric proximal tubule morphogenesis","synonyms":[{"name":"pronephros proximal tubule morphogenesis","type":"exact"}],"termid":"GO:0039011"}


id: PBO:0050476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A4","termid":"PBO:0050476"}


id: GO:0060607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell along the edges of two epithelial folds, giving rise to the lumen of an epithelial tube.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"tube closure","termid":"GO:0060606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-cell adhesion involved in sealing an epithelial fold","termid":"GO:0060607"}


id: PBO:0053690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 885","termid":"PBO:0053690"}


id: PBO:0078598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 11, Y-linked","termid":"PBO:0078598"}


id: PR:P32235
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gtp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P32235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.01","synonyms":[{"name":"Spom972h-gtp1","type":"exact"}],"termid":"PR:P32235"}


id: PBO:0080245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 8 pseudogene","termid":"PBO:0080245"}


id: PATO:0002028
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An osmolality which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"osmolality","termid":"PATO:0002027"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased osmolality","synonyms":[{"name":"low osmolality","type":"exact"}],"termid":"PATO:0002028"}


id: PBO:0046549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 3","termid":"PBO:0046549"}


id: PBO:0040869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMF antisense RNA 1","termid":"PBO:0040869"}


id: PBO:0044334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 17","termid":"PBO:0044334"}


id: MONDO:0002102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory process affecting the lip.","definition_xrefs":["NCIT:C79545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lip disorder","termid":"MONDO:0004748"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cheilitis","secondary_identifiers":["SCTID:7847004","icd11.foundation:482914030","DOID:1762","HP:0100825","MEDGEN:3349","MESH:D002613","UMLS:C0007971"],"synonyms":[{"name":"inflammation of lip","type":"exact"},{"name":"lip inflammation","type":"exact"}],"termid":"MONDO:0002102","xrefs":{"Monarch":{"xref_id":"0002102"}}}


id: PBO:0030514
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_paraquat","termid":"PBO:0030514"}


id: PBO:0084054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein for yeast Rab family members; Ypt1p is the preferred in vitro substrate but also acts on Sec4p, Ypt31p and Ypt32p; involved in the regulation of ER to Golgi vesicle transport","termid":"PBO:0084054"}


id: PBO:0077993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TraB domain containing 2A","termid":"PBO:0077993"}


id: PBO:0002209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conjugation protein Prm1 (predicted)","termid":"PBO:0002209"}


id: GO:0035743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a CD4-positive, alpha-beta T cell.","definition_xrefs":["CL:0000624","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell cytokine production","termid":"GO:0002369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"CD4-positive, alpha-beta T cell cytokine production","termid":"GO:0035743"}


id: MONDO:0017350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of tryptophan metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of tryptophan metabolism","secondary_identifiers":["icd11.foundation:282654317","ICD9:270.2","MEDGEN:22506","Orphanet:289829","SCTID:5181007","UMLS:C0041254","GARD:21154"],"synonyms":[{"name":"disorder of tryptophan metabolism","type":"related"},{"name":"inborn error of tryptophan metabolic process","type":"exact"},{"name":"inborn tryptophan metabolic process disorder","type":"exact"},{"name":"rare inborn error of tryptophan metabolic process","type":"exact"}],"termid":"MONDO:0017350","xrefs":{"Monarch":{"xref_id":"0017350"}}}


id: PBO:0041849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent serine protein kinase pseudogene 1","termid":"PBO:0041849"}


id: PBO:0031834
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_peroxisomal_morphology","termid":"PBO:0031834"}


id: GO:0032065
data:
  {"annotated_genes":["SJAG_01738","SJAG_00368","SJAG_01017","SJAG_00661","SJAG_00030"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68191],"is_not":false,"summary":null,"term":"GO:0032065"},{"annotations":[95907,102100,106597,112842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097248"}]},"cv_name":"biological_process","definition":"A process in which a protein or protein complex is maintained in a specific location in the cell cortex.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in cell","termid":"GO:0032507"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00368":null,"SJAG_00661":null,"SJAG_01017":null,"SJAG_01738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of protein location in cell cortex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"cortical protein anchoring","type":"related"}],"termid":"GO:0032065","terms_by_termid":{"GO:0032065":null,"GO:0097248":null}}


id: PBO:0047871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(2)(q22.3)","termid":"PBO:0047871"}


id: MONDO:0002750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bladder adenocarcinoma","termid":"MONDO:0002751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder colloid adenocarcinoma","secondary_identifiers":["UMLS:C1511193","DOID:3710","NCIT:C39837","MEDGEN:267373"],"synonyms":[{"name":"bladder mucinous adenocarcinoma","type":"exact"}],"termid":"MONDO:0002750","xrefs":{"Monarch":{"xref_id":"0002750"}}}


id: MONDO:0004101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papillary carcinoma arising from the thyroid gland from multiple foci.","definition_xrefs":["NCIT:C37304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland papillary carcinoma","termid":"MONDO:0005075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"multicentric papillary thyroid carcinoma","secondary_identifiers":["DOID:7086","MEDGEN:235340","UMLS:C1334817"],"synonyms":[{"name":"multicentric papillary thyroid carcinoma","type":"exact"},{"name":"multicentric papillary thyroid gland carcinoma","type":"exact"},{"name":"multicentric thyroid gland papillary carcinoma","type":"exact"}],"termid":"MONDO:0004101","xrefs":{"Monarch":{"xref_id":"0004101"}}}


id: GO:0071053
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to the transmembrane metallopeptidase ADAM2.","definition_xrefs":["PMID:11882657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha9-beta1 integrin-ADAM2 complex","synonyms":[{"name":"ITGA9-ITGB1-ADAM2 complex","type":"narrow"}],"termid":"GO:0071053"}


id: PBO:0028269
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_nitric_oxide_level_during_cellular_response_to_cadmium_ion","termid":"PBO:0028269"}


id: PBO:0077160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLE family member 1 pseudogene 1","termid":"PBO:0077160"}


id: MONDO:1010091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microtia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease, non-human animal","termid":"MONDO:1011342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtia, non-human animal","secondary_identifiers":["OMIA:001952"],"termid":"MONDO:1010091","xrefs":{"Monarch":{"xref_id":"1010091"}}}


id: PBO:0008880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3-containing 90S preribosome complex subunit Cms1 (predicted)","termid":"PBO:0008880"}


id: MONDO:0014944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic genetic obesity (obsolete MONDO:0016565)","termid":"MONDO:0016565"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"acromelic dysplasia","termid":"MONDO:0019695"},{"relation_name":"is_a","term_name":"autosomal recessive syndromic intellectual disability","termid":"MONDO:0100598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0002320"],"is_obsolete":false,"name":"short stature-brachydactyly-obesity-global developmental delay syndrome","secondary_identifiers":["MEDGEN:934656","Orphanet:464288","OMIM:617157","UMLS:C4310689","GARD:17817"],"synonyms":[{"name":"SBIDDS","type":"exact"},{"name":"short stature, brachydactyly, intellectual developmental disability, and seizures","type":"exact"}],"termid":"MONDO:0014944","xrefs":{"Monarch":{"xref_id":"0014944"}}}


id: PBO:0049088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 143","termid":"PBO:0049088"}


id: PBO:0077553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 259","termid":"PBO:0077553"}


id: PBO:0083628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin ligase targeting centromere-binding protein Cse4p; mediates polyubiquitination and degradation of histone H3 variant Cse4p; ubiquitination of Cse4p may be antagonized by Scm3p; interacts with the FACT complex preventing mislocalization of Cse4p to euchromatin independent of Slx5p; formyl-methionine/N-recognin component of N-end rule pathway mediating destruction of formylated cytosolic proteins elevated in response to starvation or stationary phase entry","termid":"PBO:0083628"}


id: PBO:0060089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 36","termid":"PBO:0060089"}


id: MONDO:0030065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agenesis of corpus callosum, cardiac, ocular, and genital syndrome","secondary_identifiers":["DOID:0080948","MEDGEN:1718475","OMIM:618929","UMLS:C5394523"],"synonyms":[{"name":"ACOGS","type":"exact"},{"name":"AGENESIS OF CORPUS CALLOSUM, CARDIAC, OCULAR, AND GENITAL SYNDROME","type":"exact"},{"name":"agenesis of corpus callosum, cardiac, ocular, and genital syndrome","type":"exact"}],"termid":"MONDO:0030065","xrefs":{"Monarch":{"xref_id":"0030065"}}}


id: GO:0046501
data:
  {"annotated_genes":["SJAG_04109","SJAG_04944","SJAG_01372","SJAG_00097","SJAG_02896","SJAG_02876","SJAG_05283","SJAG_03961"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81824,68920,65884,60622,57225,63892,59470,63905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006782"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving protoporphyrinogen IX, the specific substrate for the enzyme ferrochelatase, which catalyzes the insertion of iron to form protoheme. It is probably also the substrate for chlorophyll formation.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound metabolic process","termid":"GO:0006778"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_01372":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04944":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"protoporphyrinogen IX metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null},"synonyms":[{"name":"protoporphyrinogen IX metabolism","type":"exact"}],"termid":"GO:0046501","terms_by_termid":{"GO:0006782":null}}


id: GO:0015464
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an acetylcholine receptor ligand and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"postsynaptic neurotransmitter receptor activity","termid":"GO:0098960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"acetylcholine receptor activity","termid":"GO:0015464"}


id: GO:0140239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vesicle-mediated transport process in which the postsynapse take up external materials or membrane constituents by the invagination of a small region of the plasma membrane to form a new membrane-bounded vesicle.","definition_xrefs":["PMID:12839988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytosis","termid":"GO:0006897"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"vesicle-mediated transport in synapse","termid":"GO:0099003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"postsynaptic endocytosis","termid":"GO:0140239"}


id: GO:0007442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the hindgut are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"digestive tract morphogenesis","termid":"GO:0048546"},{"relation_name":"part_of","term_name":"hindgut development","termid":"GO:0061525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindgut morphogenesis","termid":"GO:0007442"}


id: GO:0034946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-isopropylbut-3-enoyl-CoA + H2O = 3-isopropylbut-3-enoic acid + CoASH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-isopropylbut-3-enoyl-CoA thioesterase activity (obsolete GO:0034946)","termid":"GO:0034946"}


id: GO:0062057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transport of L-aspartate and fumarate across a membrane according to the reaction L-aspartate (out) + fumarate (in) = L-aspartate (in) + fumarate (out).","definition_xrefs":["PMID:29995997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fumarate transmembrane transporter activity","termid":"GO:0015138"},{"relation_name":"is_a","term_name":"L-aspartate transmembrane transporter activity","termid":"GO:0015183"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"L-aspartate:fumarate antiporter activity","termid":"GO:0062057"}


id: PBO:0086931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTPase; essential for vesicle-mediated exocytic secretion and autophagy; associates with the exocyst component Sec15p and may regulate polarized delivery of transport vesicles to the exocyst at the plasma membrane; exocyst association is negatively regulated via phosphorylation by Cdc5p during cytokinesis","termid":"PBO:0086931"}


id: PBO:0060817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal EF-hand calcium binding protein 2","termid":"PBO:0060817"}


id: PBO:0039338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline phosphatase, placental","termid":"PBO:0039338"}


id: SO:0000677
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The canonical 5' splice site has the sequence \\\"GT\\\".","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"five_prime_cis_splice_site","termid":"SO:0000163"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canonical_five_prime_splice_site","synonyms":[{"name":"canonical 5' splice site","type":"exact"},{"name":"canonical five prime splice site","type":"exact"}],"termid":"SO:0000677"}


id: PBO:0087907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor (bHLH) involved in interorganelle communication; contributes to communication between mitochondria, peroxisomes, and nucleus; target of Hog1p; activated in stochastic pulses of nuclear localization","termid":"PBO:0087907"}


id: PBO:0001166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall assembly ADAM family peptidase Mde10","termid":"PBO:0001166"}


id: PBO:0074319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD family member 9","termid":"PBO:0074319"}


id: PBO:0070960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 15","termid":"PBO:0070960"}


id: PBO:0067513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 654, pseudogene","termid":"PBO:0067513"}


id: MONDO:0014148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Estrogen resistance syndrome is a rare, genetic endocrine disease characterized by estrogen-receptor insensitivity to estrogens and the presence of elevated estrogen and gonadotropin serum levels. Clinical manifestations include absent breast development and primary amenorrhea in association with multicystic ovaries and/or hypoplastic uterus in female patients, normal or abnormal gonadal development in male patients and markedly delayed bone maturation, persistence of open epiphyses, reduced bone mineral density, and variable tall stature in both sexes. Glucose intolerance, hyperinsulinemia and lipid abnormalities may also be present.","definition_xrefs":["Orphanet:785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"estrogen resistance syndrome","secondary_identifiers":["icd11.foundation:1267163286","UMLS:C3809250","SCTID:724555000","MEDGEN:815580","OMIM:615363","GARD:16548"],"synonyms":[{"name":"ESTRR","type":"related"},{"name":"estrogen insensitivity","type":"related"},{"name":"estrogen resistance","type":"related"},{"name":"oestrogen insensitivity","type":"related"},{"name":"oestrogen resistance","type":"related"}],"termid":"MONDO:0014148","xrefs":{"Monarch":{"xref_id":"0014148"}}}


id: PBO:0042220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCNQ pseudogene 1","termid":"PBO:0042220"}


id: PBO:0030962
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_centromere","termid":"PBO:0030962"}


id: PATO:0001737
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's parts having the arrangement which exhibits characteristics of gases.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality of a gas","termid":"PATO:0001547"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gaseus configuration","synonyms":[{"name":"gas","type":"exact"}],"termid":"PATO:0001737"}


id: SO:0000443
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe the kind of biological sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_attribute","termid":"SO:0000400"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymer_attribute","synonyms":[{"name":"polymer attribute","type":"exact"}],"termid":"SO:0000443"}


id: PBO:0087978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNAHis guanylyltransferase; adds a guanosine residue to the 5' end of tRNAH is after transcription and RNase P cleavage; can also catalyze reverse (3'-5') polymerization with certain substrates in a template-dependent reaction; couples nuclear division and migration to cell budding and cytokinesis; essential enzyme conserved among eukaryotes","termid":"PBO:0087978"}


id: PBO:0045536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA2 upstream binding RNA","termid":"PBO:0045536"}


id: PBO:0058883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10399","termid":"PBO:0058883"}


id: PBO:0071501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 4","termid":"PBO:0071501"}


id: PBO:0046387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eomesodermin","termid":"PBO:0046387"}


id: MONDO:0014056
data:
  {"annotated_genes":["SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89126],"is_not":false,"summary":null,"term":"MONDO:0014056"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"},{"relation_name":"is_a","term_name":"glioma susceptibility","termid":"MONDO:0100242"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"melanoma, cutaneous malignant, susceptibility to, 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615134","UMLS:C3554574","MEDGEN:767488"],"synonyms":[{"name":"CMM9","type":"related"},{"name":"melanoma, cutaneous malignant, 9","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, 9","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, type 9","type":"exact"},{"name":"susceptibility to cutaneous malignant melanoma 9","type":"related"}],"termid":"MONDO:0014056","terms_by_termid":{"MONDO:0014056":null},"xrefs":{"Monarch":{"xref_id":"0014056"}}}


id: MOD:01854
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds one oxygen atom to a sulfur atom of a residue without removing hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated residue","termid":"MOD:00680"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfur monooxygenated residue","termid":"MOD:01854"}


id: PBO:0003547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC subunit Nse5","termid":"PBO:0003547"}


id: PR:O13872
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 28 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02052","PANTHER:PTHR12937:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 28 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.07c","secondary_identifiers":["UniProtKB:O13872"],"synonyms":[{"name":"ESCRT-I complex subunit vps28 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-VPS28","type":"exact"}],"termid":"PR:O13872"}


id: PBO:0082309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspartic-type endopeptidase; involved in the cleavage of long-chain polyubiquitinated substrates; role in proteasome-independent, ubiquitin (Ub)-dependent proteolysis and DNA-protein crosslink repair; Ub-shuttle receptor for HO and Ufo1p; DNA damage-inducible v-SNARE binding protein and negative regulator of constitutive exocytosis; possible role in the S-phase checkpoint; UBL-UBA family member containing Ub-like (UBL), helical, Ub-associated (UBA) and retroviral-like proteinase (RVP) domains","termid":"PBO:0082309"}


id: PBO:0069978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1273, pseudogene","termid":"PBO:0069978"}


id: GO:1905660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a mitotic checkpoint complex.","definition_xrefs":["GO_REF:0000079","GOC:TermGenie","PMID:26882497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"mitotic checkpoint complex assembly","synonyms":[{"name":"MCC assembly","type":"exact"},{"name":"MCC formation","type":"exact"},{"name":"mitotic checkpoint complex formation","type":"exact"}],"termid":"GO:1905660"}


id: PBO:0052086
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch repeat and BTB domain containing 2","termid":"PBO:0052086"}


id: PBO:0057243
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 448","termid":"PBO:0057243"}


id: PBO:0038838
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 8","termid":"PBO:0038838"}


id: MONDO:0016800
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  {"annotated_genes":["SJAG_00547","SJAG_01589","SJAG_01417","SJAG_01890","SJAG_00404"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012557"},{"annotations":[87760,87761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014775"},{"annotations":[87511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008922"},{"annotations":[87625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014804"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial metabolism disorder","termid":"MONDO:0004069"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00404":null,"SJAG_00547":null,"SJAG_01417":null,"SJAG_01589":null,"SJAG_01890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial membrane transport disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:20761","MEDGEN:1842228","Orphanet:254827","UMLS:C5680718","icd11.foundation:1340308055"],"termid":"MONDO:0016800","terms_by_termid":{"MONDO:0008922":null,"MONDO:0012557":null,"MONDO:0014775":null,"MONDO:0014804":null},"xrefs":{"Monarch":{"xref_id":"0016800"}}}


id: FYPO:0006928
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id: PBO:0004047
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20 small nucleolar RNA","termid":"PBO:0004047"}


id: GO:0034975
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id: GO:0075040
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id: GO:0048031
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id: GO:0055045
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id: PBO:0027589
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_tyrosine_phosphorylation_during_cellular_response_to_salt_stress","termid":"PBO:0027589"}


id: PBO:0049508
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 15","termid":"PBO:0049508"}


id: PBO:0071010
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 12","termid":"PBO:0071010"}


id: GO:0040004
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id: GO:0061024
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id: GO:0071474
data:
  {"annotated_genes":["SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94283],"is_not":false,"summary":null,"term":"GO:0071474"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hyperosmotic environment, i.e. an environment with a higher concentration of solutes than the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperosmotic response","termid":"GO:0006972"},{"relation_name":"is_a","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular hyperosmotic response","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular HOG response","type":"exact"},{"name":"cellular hypertonic response","type":"exact"},{"name":"cellular response to hypertonicity","type":"exact"}],"termid":"GO:0071474","terms_by_termid":{"GO:0071474":null}}


id: FYPO:0006679
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing chromium ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0000257","FYPO:0002060","FYPO:0000139","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on chromium","synonyms":[{"name":"normal cell population growth in presence of chromium","type":"exact"},{"name":"normal cell population growth on chromium","type":"exact"},{"name":"normal cell population growth on chromium ion","type":"exact"},{"name":"normal cellular response to chromium","type":"related"},{"name":"normal growth on chromium ions","type":"exact"},{"name":"normal vegetative cell population growth on chromium","type":"exact"}],"termid":"FYPO:0006679"}


id: FYPO:0000488
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which reciprocal meiotic recombination is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic recombination","synonyms":[{"name":"meiotic recombination: normal","type":"related"}],"termid":"FYPO:0000488"}


id: _global:starts
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X starts Y if X is part of Y, and A and Y share a 5' or N-terminal boundary.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"starts","termid":"_global:starts"}


id: FYPO:0002785
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which riboflavin binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal riboflavin binding","termid":"FYPO:0002388"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abolished riboflavin binding","synonyms":[{"name":"riboflavin binding abolished","type":"exact"}],"termid":"FYPO:0002785"}


id: PBO:0025444
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organic aciduria","termid":"PBO:0025444"}


id: PBO:0079930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urocanate hydratase 1","termid":"PBO:0079930"}


id: MONDO:0018660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemophilia is a genetic disorder characterized by spontaneous hemorrhage or prolonged bleeding due to factor VIII or IX deficiency.","definition_xrefs":["Orphanet:448"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare hemorrhagic disorder due to a constitutional coagulation factors defect (obsolete MONDO:0019039)","termid":"MONDO:0019039"},{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hemophilia","secondary_identifiers":["MEDGEN:146334","SCTID:90935002","GARD:10418","UMLS:C0684275","MedDRA:10061992","NCIT:C3093"],"synonyms":[{"name":"hemophilia","type":"exact"}],"termid":"MONDO:0018660","xrefs":{"Monarch":{"xref_id":"0018660"}}}


id: GO:1904314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methamphetamine hydrochloride stimulus.","definition_xrefs":["GO_REF:0000071","PMID:22174933","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amine stimulus","termid":"GO:0071418"},{"relation_name":"is_a","term_name":"response to methamphetamine hydrochloride","termid":"GO:1904313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to methamphetamine hydrochloride","synonyms":[{"name":"cellular response to methamphetamine HCL","type":"exact"}],"termid":"GO:1904314"}


id: GO:1904961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the quiescent center. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:TermGenie","GO_REF:0000084","PMID:21233333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"quiescent center organization","synonyms":[{"name":"quiescent center structural organization","type":"exact"}],"termid":"GO:1904961"}


id: PBO:0055658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3098","termid":"PBO:0055658"}


id: MONDO:0005194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with any of the rotaviruses. Specific infections include human infantile diarrhea, neonatal calf diarrhea, and epidemic diarrhea of infant mice.","definition_xrefs":["MESH:D012400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rotavirus infection","secondary_identifiers":["EFO:0002622","ICD9:078.89","SCTID:18624000","UMLS:C0035869","MEDGEN:19835"],"synonyms":[{"name":"Rotavirus caused disease or disorder","type":"exact"},{"name":"Rotavirus disease or disorder","type":"exact"},{"name":"Rotavirus infectious disease","type":"exact"}],"termid":"MONDO:0005194","xrefs":{"Monarch":{"xref_id":"0005194"}}}


id: MONDO:0018442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acitretin/Etretinate embryopathy is a teratogenic disorder due to acitretin or etretinate exposure during the first trimester of pregnancy, carrying a risk of fetal malformations of approximately 20%, including central nervous system, craniofacial, ear, thymic, cardiac and limb anomalies.","definition_xrefs":["Orphanet:40366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acitretin/etretinate embryopathy","secondary_identifiers":["MEDGEN:1386157","GARD:18827","SCTID:725287006","UMLS:C4510941","MESH:C538169"],"synonyms":[{"name":"Acitretine embryofetopathy","type":"related"},{"name":"acitretin embryofetopathy","type":"related"},{"name":"acitretin embryopathy","type":"related"},{"name":"fetal acitretin syndrome","type":"related"},{"name":"fetal acitretin/etretinate syndrome","type":"exact"},{"name":"foetal acitretin syndrome","type":"related"},{"name":"foetal acitretin/etretinate syndrome","type":"exact"},{"name":"retinoid embryopathy","type":"exact"}],"termid":"MONDO:0018442","xrefs":{"Monarch":{"xref_id":"0018442"}}}


id: GO:1901997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of indoleacetic acid biosynthetic process via tryptophan.","definition_xrefs":["PMID:23377040","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hormone biosynthetic process","termid":"GO:0032353"},{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"negative regulation of amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of auxin metabolic process","termid":"GO:0090356"},{"relation_name":"is_a","term_name":"regulation of indoleacetic acid biosynthetic process via tryptophan","termid":"GO:1901996"},{"relation_name":"negatively_regulates","term_name":"indoleacetic acid biosynthetic process via tryptophan","termid":"GO:0009848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"negative regulation of indoleacetic acid biosynthetic process via tryptophan","synonyms":[{"name":"down regulation of IAA biosynthetic process via tryptophan","type":"exact"},{"name":"down regulation of indoleacetic acid anabolism via tryptophan","type":"exact"},{"name":"down regulation of indoleacetic acid biosynthetic process via tryptophan","type":"exact"},{"name":"down regulation of indoleacetic acid formation via tryptophan","type":"exact"},{"name":"down regulation of indoleacetic acid synthesis via tryptophan","type":"exact"},{"name":"down-regulation of IAA biosynthetic process via tryptophan","type":"exact"},{"name":"down-regulation of indoleacetic acid anabolism via tryptophan","type":"exact"},{"name":"down-regulation of indoleacetic acid biosynthetic process via tryptophan","type":"exact"},{"name":"down-regulation of indoleacetic acid formation via tryptophan","type":"exact"},{"name":"down-regulation of indoleacetic acid synthesis via tryptophan","type":"exact"},{"name":"downregulation of IAA biosynthetic process via tryptophan","type":"exact"},{"name":"downregulation of indoleacetic acid anabolism via tryptophan","type":"exact"},{"name":"downregulation of indoleacetic acid biosynthetic process via tryptophan","type":"exact"},{"name":"downregulation of indoleacetic acid formation via tryptophan","type":"exact"},{"name":"downregulation of indoleacetic acid synthesis via tryptophan","type":"exact"},{"name":"inhibition of IAA biosynthetic process via tryptophan","type":"exact"},{"name":"inhibition of indoleacetic acid anabolism via tryptophan","type":"exact"},{"name":"inhibition of indoleacetic acid biosynthetic process via tryptophan","type":"narrow"},{"name":"inhibition of indoleacetic acid formation via tryptophan","type":"exact"},{"name":"inhibition of indoleacetic acid synthesis via tryptophan","type":"exact"},{"name":"negative regulation of IAA biosynthetic process via tryptophan","type":"exact"},{"name":"negative regulation of indoleacetic acid anabolism via tryptophan","type":"exact"},{"name":"negative regulation of indoleacetic acid formation via tryptophan","type":"exact"},{"name":"negative regulation of indoleacetic acid synthesis via tryptophan","type":"exact"}],"termid":"GO:1901997"}


id: MONDO:0015611
data:
  {"annotated_genes":["SJAG_04323"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010155"}]},"cv_name":"mondo","definition":"Neutral lipid storage disease (NLSD) refers to a group of diseases characterized by a deficit in the degradation of cytoplasmic triglycerides and their accumulation in cytoplasmic lipid vacuoles in most tissues of the body. The group is heterogeneous: currently cases of NLSD with icthyosis (NLSDI/Dorfman-Chanarin disease) and NLSD with myopathy (NLSDM/neutral lipid storage myopathy) can be distinguished.","definition_xrefs":["Orphanet:165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"},{"relation_name":"is_a","term_name":"lysosomal lipid storage disorder","termid":"MONDO:0019245"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04323":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561","MONDO:0002525"],"is_obsolete":false,"name":"neutral lipid storage disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1853293","NANDO:1200622","icd11.foundation:621440298","DOID:0050729","NANDO:2200997","UMLS:C5848057","GARD:3262"],"synonyms":[{"name":"Chanarin-Dorfman syndrome","type":"narrow"},{"name":"lipidosis with triglycerid storage disease","type":"related"},{"name":"lipidosis with triglyceride storage disease","type":"exact"}],"termid":"MONDO:0015611","terms_by_termid":{"MONDO:0010155":null},"xrefs":{"Monarch":{"xref_id":"0015611"}}}


id: GO:0010210
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetyl-phenylalanine + H2O = indole-3-acetate + phenylalanine.","definition_xrefs":["GOC:syr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IAA-amino acid conjugate hydrolase activity","termid":"GO:0010178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"IAA-Phe conjugate hydrolase activity","termid":"GO:0010210"}


id: PBO:0040758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain expressed associated with NEDD4 1","termid":"PBO:0040758"}


id: PBO:0027015
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_positive_regulation_of_protein_kinase_activity","termid":"PBO:0027015"}


id: PBO:0080519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP family member 5, pseudogene","termid":"PBO:0080519"}


id: MONDO:0012356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glomerulocystic kidney disease with hyperuricemia and isosthenuria (obsolete MONDO:0012356)","termid":"MONDO:0012356","xrefs":{"Monarch":{"xref_id":"0012356"}}}


id: PBO:0109516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2879","termid":"PBO:0109516"}


id: PBO:0043372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog pseudogene 2","termid":"PBO:0043372"}


id: PBO:0045263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta/notch like EGF repeat containing","termid":"PBO:0045263"}


id: FYPO:0005800
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of one or more proteins within the plasma membrane is abnormal.","definition_xrefs":["PMID:25837586","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein movement within plasma membrane during vegetative growth","synonyms":[{"name":"abnormal protein movement within plasma membrane during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005800"}


id: GO:0042147
data:
  {"annotated_genes":["SJAG_04629","SJAG_06588","SJAG_03963","SJAG_04023","SJAG_04565","SJAG_02277","SJAG_00287","SJAG_02823","SJAG_03504","SJAG_04609","SJAG_04552","SJAG_04112","SJAG_00314","SJAG_02811","SJAG_01809","SJAG_04275","SJAG_00143","SJAG_04359","SJAG_01039","SJAG_03756","SJAG_00971","SJAG_01645","SJAG_05030","SJAG_00379","SJAG_01448","SJAG_02750","SJAG_00632","SJAG_02852","SJAG_04219","SJAG_02177","SJAG_04822","SJAG_04902","SJAG_02193"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63432,65006,71710,72253,72774,73308,73343,73709,77561,77747,77881,79040,79111,79293,80478,81416,81798,94168,96847,99056,99661,100600,103058,104064,104598,107479,114779,114998,120531,120919],"is_not":false,"summary":null,"term":"GO:0042147"},{"annotations":[73268,117223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034498"},{"annotations":[82095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034499"}]},"cv_name":"biological_process","definition":"The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport.","definition_xrefs":["GOC:jl","PMID:16936697","PMID:10873832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosomal transport","termid":"GO:0016197"},{"relation_name":"is_a","term_name":"cytosolic transport","termid":"GO:0016482"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_00287":null,"SJAG_00314":null,"SJAG_00379":null,"SJAG_00632":null,"SJAG_00971":null,"SJAG_01039":null,"SJAG_01448":null,"SJAG_01645":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02193":null,"SJAG_02277":null,"SJAG_02750":null,"SJAG_02811":null,"SJAG_02823":null,"SJAG_02852":null,"SJAG_03504":null,"SJAG_03756":null,"SJAG_03963":null,"SJAG_04023":null,"SJAG_04112":null,"SJAG_04219":null,"SJAG_04275":null,"SJAG_04359":null,"SJAG_04552":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04629":null,"SJAG_04822":null,"SJAG_04902":null,"SJAG_05030":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"retrograde transport, endosome to Golgi","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"retrograde (endosome to Golgi) transport","type":"exact"}],"termid":"GO:0042147","terms_by_termid":{"GO:0034498":null,"GO:0034499":null,"GO:0042147":null}}


id: PBO:0091239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zn(2)-C6 fungal-type, truncated","termid":"PBO:0091239"}


id: SO:0000322
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of nucleotide sequence targeted by a nuclease enzyme that is found cleaved more than would be expected by chance.","direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease_sensitive_site","termid":"SO:0000684"},{"relation_name":"is_a","term_name":"accessible_DNA_region","termid":"SO:0002331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclease_hypersensitive_site","synonyms":[{"name":"nuclease hypersensitive site","type":"exact"}],"termid":"SO:0000322"}


id: GO:0046962
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) -> ADP + phosphate + Na+(out), by a rotational mechanism.","definition_xrefs":["RHEA:58157","PMID:30791207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ATPase activity, coupled to transmembrane movement of ions, rotational mechanism","termid":"GO:0044769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"sodium-transporting ATPase activity, rotational mechanism","secondary_identifiers":["EC:7.2.2.1"],"synonyms":[{"name":"ATP phosphohydrolase (Na+-transporting) activity","type":"related"},{"name":"ATP synthase, sodium ion specific activity","type":"related"},{"name":"Na(+)-translocating ATPase activity","type":"broad"},{"name":"Na(+)-transporting two-sector ATPase activity","type":"related"},{"name":"Na+-translocating ATPase activity","type":"related"},{"name":"Na+-translocating F1Fo-ATPase","type":"narrow"},{"name":"Na+-transporting two-sector ATPase","type":"narrow"},{"name":"sodium transporting ATPase activity, rotational mechanism","type":"exact"},{"name":"sodium-translocating F-type ATPase activity","type":"narrow"},{"name":"sodium-translocating V-type ATPase activity","type":"narrow"},{"name":"sodium-transporting two-sector ATPase activity","type":"narrow"},{"name":"vacuolar-type Na+-ATPase","type":"narrow"},{"name":"vacuolar-type Na+-translocating ATPase","type":"narrow"}],"termid":"GO:0046962"}


id: MONDO:1010461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrophic cardiomyopathy that occurs in Arabian camel.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, non-human animal","termid":"MONDO:1010015"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic cardiomyopathy, Arabian camel","secondary_identifiers":["OMIA:000515-9838"],"termid":"MONDO:1010461","xrefs":{"Monarch":{"xref_id":"1010461"}}}


id: MONDO:0010711
data:
  {"annotated_genes":["SJAG_01511"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86949],"is_not":false,"summary":null,"term":"MONDO:0010711"}]},"cv_name":"mondo","definition":"A rare developmental defect during embryogenesis syndrome characterized by Robin sequence (micrognathia, glossoptosis, and cleft palate), atrial septal defect, persistence of the left superior vena cava, and talipes equinovarus. The phenotype is variable, some patients present with further dysmorphic characteristics (e.g. hypertelorism, ear abnormalities) while others do not have any key findings. Additional features, such as syndactyly, polydactyly, or brain anomalies (e.g. cerebellar hypoplasia), have also been reported. The syndrome is almost invariably lethal with affected males either dying prenatally or living just a few months.","definition_xrefs":["Orphanet:2886"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01511":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"TARP syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10089","SCTID:725911008","OMIM:311900","MESH:C536942","MEDGEN:333324","UMLS:C1839463","DOID:0111780"],"synonyms":[{"name":"Pierre Robin sequence - congenital heart defect - talipes","type":"related"},{"name":"Pierre Robin sequence-congenital heart defect-talipes syndrome","type":"exact"},{"name":"Pierre Robin syndrome - congenital heart defect - talipes","type":"related"},{"name":"Pierre Robin syndrome with congenital heart malformation and clubfoot","type":"related"},{"name":"Pierre Robin syndrome-congenital heart defect-talipes syndrome","type":"exact"},{"name":"TARP syndrome, X-linked recessive","type":"exact"},{"name":"TARPS","type":"related"},{"name":"talipes equinovarus - atrial septal defect - Robin sequence - persistence of the left superior vena cava","type":"related"},{"name":"talipes equinovarus, atrial septal defect, Robin sequence, and persistence of left Superior vena cava","type":"related"},{"name":"talipes equinovarus-atrial septal defect-Robin sequence-persistence of the left superior vena cava syndrome","type":"exact"},{"name":"tarp syndrome","type":"exact"}],"termid":"MONDO:0010711","terms_by_termid":{"MONDO:0010711":null},"xrefs":{"Monarch":{"xref_id":"0010711"}}}


id: MONDO:0017644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare tremor disorder (obsolete MONDO:0017644)","secondary_identifiers":["Orphanet:306712"],"termid":"MONDO:0017644","xrefs":{"Monarch":{"xref_id":"0017644"}}}


id: PBO:0085430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyamine oxidase; converts spermine to spermidine, which is required for the essential hypusination modification of translation factor eIF-5A; also involved in pantothenic acid biosynthesis","termid":"PBO:0085430"}


id: PBO:0060488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox pseudogene 10","termid":"PBO:0060488"}


id: PBO:0050564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HRG pseudogene 2","termid":"PBO:0050564"}


id: GO:1990057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cell cycle regulatory process in which the cell cycle is halted during one of the normal phases (G1, S, G2, M) as a result of DNA damage from environmental insults or errors during metabolism.","definition_xrefs":["PMID:10630641","GOC:rph"],"gene_count":0,"genotype_count":0,"name":"obsolete cell cycle arrest in response to DNA damage stimulus (obsolete GO:1990057)","synonyms":[{"name":"cell cycle arrest in response to DNA damage stimulus","type":"exact"}],"termid":"GO:1990057"}


id: PBO:0085953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant is viable and displays elevated frequency of mitochondrial genome loss; null mutation confers sensitivity to tunicamycin and DTT","termid":"PBO:0085953"}


id: MONDO:0001765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyneuropathy","termid":"MONDO:0001824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"polyneuropathy in collagen vascular disease","secondary_identifiers":["ICD9:357.4","ICD9:357.1","MEDGEN:509648","DOID:13649","SCTID:193177003","UMLS:C0154759"],"termid":"MONDO:0001765","xrefs":{"Monarch":{"xref_id":"0001765"}}}


id: GO:0048652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which individuals that have the potential to develop any of several possible distinct developmental paths have their individual developmental fates determined in response to genetic cues.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyphenic determination","termid":"GO:0048647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyphenic determination, influence by genetic factors","termid":"GO:0048652"}


id: MOD:00805
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O3-(N-acetylaminoglucosyl)-L-serine.","definition_xrefs":["PubMed:3086323","PubMed:8404891","RESID:AA0398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminoglucosylated residue","termid":"MOD:00448"},{"relation_name":"is_a","term_name":"O-(N-acetylamino)hexosyl-L-serine","termid":"MOD:01675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-(N-acetylamino)glucosyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(2-acetamido-2-deoxy-beta-D-glucopyranosyloxy)propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (GlcNAc) serine","type":"exact"},{"name":"CARBOHYD O-linked (HexNAc)","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"O-(2-acetylamino-2-deoxy-beta-D-glucopyranosyl)-L-serine","type":"exact"},{"name":"O-(N-acetylamino)glucosyl-L-serine","type":"exact"},{"name":"O-(N-acetylglucosaminyl)serine","type":"exact"},{"name":"O-glycosylserine","type":"exact"},{"name":"O-seryl-beta-N-acetylglucosaminide","type":"exact"},{"name":"O3-(2-acetamido-2-deoxy-beta-D-glucopyranosyl)-L-serine","type":"exact"},{"name":"O3-(N-acetylglucosaminyl)serine","type":"exact"},{"name":"OGlcNAcSer","type":"exact"}],"termid":"MOD:00805"}


id: PBO:0047588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor like 1","termid":"PBO:0047588"}


id: GO:0034850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: isooctane + 1/2 O2 = 2,4,4-trimethyl-1-pentanol.","definition_xrefs":["UM-BBD_reactionID:r1269"],"gene_count":0,"genotype_count":0,"name":"obsolete isooctane monooxygenase activity (obsolete GO:0034850)","termid":"GO:0034850"}


id: PATO:0000074
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000074 shattering (obsolete PATO:0000074)","termid":"PATO:0000074"}


id: GO:0050773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dendrite development.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron projection development","termid":"GO:0010975"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"dendrite development","termid":"GO:0016358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dendrite development","termid":"GO:0050773"}


id: PBO:0049519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.L variant histone 1M, pseudogene","termid":"PBO:0049519"}


id: PBO:0026654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_maintenance_of_mitotic_actomyosin_contractile_ring_localization","termid":"PBO:0026654"}


id: PBO:0086197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; detected in highly purified mitochondria in high-throughput studies; predicted to be involved in ribosome biogenesis","termid":"PBO:0086197"}


id: PR:O94453
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquinone biosynthesis protein COQ4, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12922:SF5","PRO:DNx","OMA:SCHPO00361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinone biosynthesis protein coq4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.12c","secondary_identifiers":["UniProtKB:O94453"],"synonyms":[{"name":"Spom972h-COQ4","type":"exact"},{"name":"coenzyme Q biosynthesis protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94453"}


id: GO:0044342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of pancreatic B cells, resulting in the expansion of an pancreatic B cell population. Pancreatic B cell are cells of the pancreas that secrete insulin.","definition_xrefs":["GOC:jl","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type B pancreatic cell proliferation","synonyms":[{"name":"pancreatic B cell proliferation","type":"exact"},{"name":"pancreatic beta cell proliferation","type":"exact"}],"termid":"GO:0044342"}


id: PBO:0064568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POP5 homolog, ribonuclease P/MRP subunit","termid":"PBO:0064568"}


id: GO:0042186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of o-xylene, (1,2-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"o-xylene metabolic process","termid":"GO:0018950"},{"relation_name":"is_a","term_name":"xylene catabolic process","termid":"GO:0042184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"o-xylene catabolic process","synonyms":[{"name":"o-xylene breakdown","type":"exact"},{"name":"o-xylene catabolism","type":"exact"},{"name":"o-xylene degradation","type":"exact"},{"name":"ortho-xylene catabolic process","type":"exact"},{"name":"ortho-xylene catabolism","type":"exact"}],"termid":"GO:0042186"}


id: PBO:0059039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 26","termid":"PBO:0059039"}


id: FYPO:0005973
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a specific transport process is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport phenotype during vegetative growth","termid":"FYPO:0001336"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal transport during vegetative growth","synonyms":[{"name":"abnormal transport during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005973"}


id: PBO:0071080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 82","termid":"PBO:0071080"}


id: GO:1901899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of relaxation of cardiac muscle.","definition_xrefs":["GOC:rl","PMID:19708671","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of relaxation of muscle","termid":"GO:1901079"},{"relation_name":"is_a","term_name":"regulation of relaxation of cardiac muscle","termid":"GO:1901897"},{"relation_name":"positively_regulates","term_name":"relaxation of cardiac muscle","termid":"GO:0055119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of relaxation of cardiac muscle","synonyms":[{"name":"activation of relaxation of cardiac muscle","type":"narrow"},{"name":"up regulation of relaxation of cardiac muscle","type":"exact"},{"name":"up-regulation of relaxation of cardiac muscle","type":"exact"},{"name":"upregulation of relaxation of cardiac muscle","type":"exact"}],"termid":"GO:1901899"}


id: GO:0050877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An organ system process carried out by any of the organs or tissues of the neurological system.","definition_xrefs":["GOC:ai","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nervous system process","synonyms":[{"name":"neurological system process","type":"exact"},{"name":"neurophysiological process","type":"exact"},{"name":"pan-neural process","type":"related"}],"termid":"GO:0050877"}


id: GO:0051745
data:
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id: MONDO:0007895
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id: PBO:0065864
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB21, member RAS oncogene family","termid":"PBO:0065864"}


id: PBO:0028481
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id: GO:0023051
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id: FYPO:0000827
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id: GO:0033380
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id: MONDO:0017413
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id: MONDO:0019046
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id: PBO:0039056
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id: GO:0061731
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id: GO:0140862
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id: PBO:0044090
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id: GO:0001598
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id: FYPO:0000928
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id: PR:Q09852
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id: GO:0018429
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id: PBO:0047349
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id: GO:0071411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fluoxetine stimulus. Fluoxetine increases the extracellular level of the neurotransmitter serotonin by inhibiting its reuptake into the presynaptic cell, increasing the level of serotonin available to bind to the postsynaptic receptor.","definition_xrefs":["GOC:mah","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fluoxetine","termid":"GO:0014076"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to fluoxetine","termid":"GO:0071411"}


id: GO:0097597
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Specialized organelle found in Giardia species (trophozoite stage) and characterized by a spiral array of microtubules and microtubule-associated structures including dorsal microribbons and crossbridges. The edge of the ventral disc narrows into a lateral crest. The ventral disk mediates mechanical attachment of the trophozoite to the host's intestinal wall, and contains the contractile proteins actinin, alpha-actinin, myosin, and tropomyosin working towards contraction of the disk involved in adherence.","definition_xrefs":["PMID:4777416","PMID:11432808","ISBN:9780124260207","GOC:giardia","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ventral disc","synonyms":[{"name":"adhesive disc","type":"related"},{"name":"ventral adhesive disc","type":"exact"},{"name":"ventral disk","type":"related"}],"termid":"GO:0097597"}


id: GO:0000191
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of MAPKKK activity in the context of regulating pseudohyphal or invasive growth.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK (pseudohyphal growth) (obsolete GO:0000191)","synonyms":[{"name":"activation of MAPKKK (pseudohyphal growth)","type":"exact"}],"termid":"GO:0000191"}


id: GO:0033984
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate = indole + D-glyceraldehyde 3-phosphate.","definition_xrefs":["EC:4.1.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"indole-3-glycerol-phosphate lyase activity","secondary_identifiers":["KEGG_REACTION:R02340","MetaCyc:RXN0-2381","RHEA:14081"],"synonyms":[{"name":"(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate D-glyceraldehyde-3-phosphate-lyase (indole-forming) activity","type":"related"},{"name":"(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate D-glyceraldehyde-3-phosphate-lyase activity","type":"related"},{"name":"BX1","type":"related"},{"name":"IGL","type":"related"},{"name":"TSA","type":"related"},{"name":"indole glycerol phosphate hydrolase activity","type":"related"},{"name":"indole synthase activity","type":"related"},{"name":"indole-3-glycerol phosphate lyase activity","type":"related"},{"name":"indole-3-glycerolphosphate D-glyceraldehyde-3-phosphate-lyase activity","type":"related"},{"name":"indoleglycerolphosphate aldolase activity","type":"related"},{"name":"tryptophan synthase alpha activity","type":"narrow"},{"name":"tryptophan synthase alpha subunit activity","type":"narrow"}],"termid":"GO:0033984"}


id: MOD:00607
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:288","PubMed:7949339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dioxoindolealanine lactone","synonyms":[{"name":"Trp->Oxolactone","type":"related"},{"name":"Tryptophan oxidation to oxolactone","type":"related"}],"termid":"MOD:00607"}


id: MONDO:0700187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition occurring in cats characterized by solitary or multiple cutaneous nodules and papules, which may metastasize late in the course of the disease. Lesions consist of poorly circumscribed histiocytic infiltrates of the superficial and deep dermis, with variable extension into the subcutis.","definition_xrefs":["NCIT:C176702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline progressive histiocytosis","termid":"MONDO:0700187","xrefs":{"Monarch":{"xref_id":"0700187"}}}


id: PBO:0002991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline specific plasma membrane permease Put4 (predicted)","termid":"PBO:0002991"}


id: PBO:0029904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_localization_phenotype","termid":"PBO:0029904"}


id: GO:0032271
data:
  {"annotated_genes":["SJAG_01993","SJAG_04479","SJAG_00521","SJAG_02566","SJAG_03086","SJAG_04100","SJAG_01894","SJAG_00279","SJAG_02700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81977,80924,94206,77314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[68635,78508,79152,81222,69535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process of creating protein polymers.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"protein polymerization","termid":"GO:0051258"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_04100":null,"SJAG_04479":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"regulation of protein polymerization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein polymerisation","type":"exact"}],"termid":"GO:0032271","terms_by_termid":{"GO:0030833":null,"GO:0051016":null}}


id: FYPO:0001735
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of an assembled iron-sulfur cluster from a scaffold protein to an acceptor protein is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal iron-sulfur cluster transfer","synonyms":[{"name":"abnormal iron-sulfur cluster transfer during mitotic cell cycle","type":"related"},{"name":"abnormal iron-sulfur cluster transfer during vegetative growth","type":"exact"},{"name":"abnormal iron-sulphur cluster transfer","type":"exact"}],"termid":"FYPO:0001735"}


id: GO:0016128
data:
  {"annotated_genes":["SJAG_04018","SJAG_02982","SJAG_03598","SJAG_03715","SJAG_04049","SJAG_03024","SJAG_02719","SJAG_01474","SJAG_03929","SJAG_04790","SJAG_04270","SJAG_03509","SJAG_00624","SJAG_00717","SJAG_00158","SJAG_02104","SJAG_00770","SJAG_03018","SJAG_03249","SJAG_03750","SJAG_04059","SJAG_04217","SJAG_01307","SJAG_02855","SJAG_00413","SJAG_02068","SJAG_04810","SJAG_04499","SJAG_00453","SJAG_03235","SJAG_02044","SJAG_00370","SJAG_03531"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71606,75724,96529,78265,109803,90337,78273,73297,82118,109489,67109,77908,81906,112061,118550,79002,72678,82092,91530,73501,74918,117233,111219,76069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[105288,105930,78080,82084,117075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008204"},{"annotations":[95766],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[111827],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[90426,107790],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytosteroids, steroids of higher plants that differ from animal steroids in having substitutions at C24 and/or a double bond at C22. Phytosteroids are so named because they occur in higher plants; some, notably ergosterol, are also found in fungi.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02068":null,"SJAG_02104":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04499":null,"SJAG_04790":null,"SJAG_04810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phytosteroid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"phytosteroid metabolism","type":"exact"}],"termid":"GO:0016128","terms_by_termid":{"GO:0006696":null,"GO:0008204":null,"GO:0010895":null,"GO:0032443":null,"GO:0070452":null}}


id: GO:0046719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any virus-mediated process that modulates the levels of viral proteins in a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral process","termid":"GO:0050792"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation by virus of viral protein levels in host cell","synonyms":[{"name":"regulation of viral protein levels","type":"exact"}],"termid":"GO:0046719"}


id: BFO:0000066
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occurs_in","termid":"BFO:0000066"}


id: FYPO:0001071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transport is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"transport phenotype during vegetative growth","termid":"FYPO:0001336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal transport","synonyms":[{"name":"normal transport during mitotic cell cycle","type":"related"},{"name":"normal transport during vegetative growth","type":"exact"}],"termid":"FYPO:0001071"}


id: PBO:0072873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SATB2 antisense RNA 1","termid":"PBO:0072873"}


id: GO:0140615
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that catalyzes the cleavage of citrate into oxaloacetate and acetyl-CoA.","definition_xrefs":["PMID:12376641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ATP-dependent citrate lyase complex","synonyms":[{"name":"citrate lyase complex","type":"broad"},{"name":"citrate synthase complex","type":"broad"}],"termid":"GO:0140615"}


id: MONDO:0014980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cone-rod dystrophy and hearing loss","secondary_identifiers":["OMIMPS:617236"],"synonyms":[{"name":"CRDHL","type":"exact"},{"name":"cone-rod dystrophy and hearing loss","type":"exact"},{"name":"cone-rod dystrophy and hearing loss; CRDHL","type":"exact"}],"termid":"MONDO:0014980","xrefs":{"Monarch":{"xref_id":"0014980"}}}


id: PBO:0058123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4425","termid":"PBO:0058123"}


id: GO:0006970
data:
  {"annotated_genes":["SJAG_03185","SJAG_02592","SJAG_04567","SJAG_04205","SJAG_02091","SJAG_02342","SJAG_00596","SJAG_04668","SJAG_03893","SJAG_02389","SJAG_03815","SJAG_01084","SJAG_00661","SJAG_02883","SJAG_04726","SJAG_00409"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071474"},{"annotations":[91383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"},{"annotations":[104727,119089,59337,93772,96251,108457,106470,116465,97873,118287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071470"},{"annotations":[102097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071472"},{"annotations":[111987,62861,81444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009651"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_01084":null,"SJAG_02091":null,"SJAG_02342":null,"SJAG_02389":null,"SJAG_02592":null,"SJAG_02883":null,"SJAG_03185":null,"SJAG_03815":null,"SJAG_03893":null,"SJAG_04205":null,"SJAG_04567":null,"SJAG_04668":null,"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to osmotic stress","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"osmotic response","type":"exact"},{"name":"osmotic stress response","type":"exact"}],"termid":"GO:0006970","terms_by_termid":{"GO:0009651":null,"GO:0071470":null,"GO:0071472":null,"GO:0071473":null,"GO:0071474":null}}


id: PBO:0046438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPM2A divergent transcript","termid":"PBO:0046438"}


id: GO:0052835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 3,4,6-trisphosphate + ATP = 1D-myo-inositol 1,3,4,6-tetrakisphosphate + ADP + H+.","definition_xrefs":["PMID:11909533","RHEA:70287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate kinase activity","termid":"GO:0051766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"inositol-3,4,6-trisphosphate 1-kinase activity","secondary_identifiers":["MetaCyc:RXN-10984","Reactome:R-HSA-1855169"],"synonyms":[{"name":"1D-myo-inositol-trisphosphate 1-kinase activity","type":"broad"},{"name":"IP3 1-kinase activity","type":"broad"},{"name":"Ins(3,4,6)P3 1-kinase activity","type":"related"},{"name":"inositol 3,4,6-trisphosphate 1-kinase activity","type":"exact"},{"name":"inositol-trisphosphate 1-kinase activity","type":"broad"},{"name":"ins(3,4,6)P(3) 1-kinase activity","type":"related"}],"termid":"GO:0052835"}


id: FYPO:0002099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to hydroxyurea","synonyms":[{"name":"normal protein phosphorylation during cellular response to HU","type":"exact"},{"name":"normal protein phosphorylation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0002099"}


id: GO:0010397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the pectic apiogalacturonan, characterized by a backbone of alpha-(1->4)-linked D-galacturonic acid residues substituted with apiose and apiobiose (D-apiofuranosyl-beta-(1->3)-D-apiose) side chains via O-2 or O-3 links.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"apiogalacturonan metabolic process","synonyms":[{"name":"apiogalacturonan metabolism","type":"exact"}],"termid":"GO:0010397"}


id: MONDO:0009537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Interstitial pneumonia characterized by the presence of bibasilar pulmonary interstitial infiltrates composed of lymphocytes and plasma cells. It may be associated with autoimmune and lymphoproliferative disorders. Signs and symptoms include fever, cough, and dyspnea. Symptomatic patients may require immunosuppressive treatment.","definition_xrefs":["NCIT:C27558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic interstitial pneumonia","termid":"MONDO:0002429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphoid interstitial pneumonia","secondary_identifiers":["GARD:16700","MESH:C562489","MEDGEN:82682","UMLS:C0264511","icd11.foundation:1140418798","OMIM:247610","Orphanet:79128","ICD10CM:J84.2","DOID:0050159","SCTID:44274007","NANDO:1200424","ICD9:516.8","MedDRA:10062997"],"synonyms":[{"name":"LIP","type":"related"},{"name":"diffuse hyperplasia of bronchus-associated lymphoid tissue","type":"exact"},{"name":"lymphocytic interst. pneumonitis","type":"exact"},{"name":"lymphocytic interstitial pneumonia","type":"exact"},{"name":"lymphocytic interstitial pneumonitis","type":"exact"},{"name":"lymphoid interstitial pneumonia","type":"exact"}],"termid":"MONDO:0009537","xrefs":{"Monarch":{"xref_id":"0009537"}}}


id: PBO:0027432
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_replication_fork_arrest_at_tRNA_locus","termid":"PBO:0027432"}


id: GO:0044188
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the host cell lysosome and separating its contents from the host cell cytoplasm.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"part_of","term_name":"host cell lysosome","termid":"GO:0044187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell lysosomal membrane","termid":"GO:0044188"}


id: MOD:01471
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to (Z)-dehydrobutyrine.","definition_xrefs":["DeltaMass:0","RESID:AA0182","PubMed:1547888","PubMed:3769923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehydrobutyrine (Thr)","termid":"MOD:00190"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(Z)-dehydrobutyrine (Thr)","synonyms":[{"name":"(2Z)-2-aminobut-2-enoic acid","type":"exact"},{"name":"(Z)-2-amino-2-butenoic acid","type":"exact"},{"name":"(Z)-2-aminobutenoic acid","type":"exact"},{"name":"(Z)-dehydrobutyrine","type":"exact"},{"name":"(Z)dHAbu","type":"exact"},{"name":"2,3-didehydrobutyrine","type":"exact"},{"name":"3-methyldehydroalanine","type":"exact"},{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"},{"name":"Dehydroamino butyric acid","type":"exact"},{"name":"Dhb","type":"exact"},{"name":"MOD_RES (Z)-2,3-didehydrobutyrine","type":"exact"},{"name":"alpha,beta-dehydroaminobutyric acid","type":"exact"},{"name":"anhydrothreonine","type":"exact"},{"name":"methyl-dehydroalanine","type":"exact"}],"termid":"MOD:01471"}


id: PBO:0080700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WNT5A antisense RNA 1","termid":"PBO:0080700"}


id: GO:0046736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The intentional, virally-encoded stimulation of a host humoral defense response to viral infection.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete induction of humoral immune response in host by virus (obsolete GO:0046736)","synonyms":[{"name":"active induction of humoral immune response in host by virus","type":"related"},{"name":"active viral induction of humoral immune response in host","type":"exact"}],"termid":"GO:0046736"}


id: SO:0001225
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is silenced by histone modification.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"silenced_by_histone_modification","termid":"SO:0001221"},{"relation_name":"is_a","term_name":"silenced_gene","termid":"SO:0000127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_silenced_by_histone_modification","synonyms":[{"name":"gene silenced by histone modification","type":"exact"}],"termid":"SO:0001225"}


id: GO:0010974
data:
  {"annotated_genes":["SJAG_04943","SJAG_02169","SJAG_00229","SJAG_03508","SJAG_00526","SJAG_03681","SJAG_03592","SJAG_02514","SJAG_01386","SJAG_01464","SJAG_01790","SJAG_03048","SJAG_03353","SJAG_06270","SJAG_00883","SJAG_04455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[94725,117906,103201,109056,97539,92599,109189,95339,112145,93616,94810,109499,74667,106991,101508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of division septum formation. division septum formation is he assembly and arrangement of a septum that spans the plasma membrane interface between progeny cells following cytokinesis.","definition_xrefs":["PMID:19959363","GOC:mtg_cell_cycle","PMID:21246752","PMID:22786806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of division septum assembly","termid":"GO:0032955"},{"relation_name":"is_a","term_name":"negative regulation of cell septum assembly","termid":"GO:1901892"},{"relation_name":"negatively_regulates","term_name":"division septum assembly","termid":"GO:0000917"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00526":null,"SJAG_00883":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01790":null,"SJAG_02169":null,"SJAG_02514":null,"SJAG_03048":null,"SJAG_03353":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03681":null,"SJAG_04455":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of division septum assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1902469","GO:1901139"],"synonyms":[{"name":"inhibition of division septum assembly involved in cell cycle cytokinesis","type":"narrow"},{"name":"negative regulation of division septum formation","type":"exact"}],"termid":"GO:0010974","terms_by_termid":{"GO:0031030":null,"GO:1905757":null}}


id: PBO:0065282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich and Gla domain 2","termid":"PBO:0065282"}


id: GO:0030710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the frequency, rate or extent of border cell delamination.","definition_xrefs":["PMID:10822261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"regulates","term_name":"border follicle cell delamination","termid":"GO:0030709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of border follicle cell delamination","synonyms":[{"name":"regulation of border cell delamination","type":"broad"}],"termid":"GO:0030710"}


id: GO:0019829
data:
  {"annotated_genes":["SJAG_04015","SJAG_02782","SJAG_01400","SJAG_03406","SJAG_04757","SJAG_03850","SJAG_03866","SJAG_01913","SJAG_01447","SJAG_01471","SJAG_05294","SJAG_04167","SJAG_04258","SJAG_01435","SJAG_02399","SJAG_02023","SJAG_00516","SJAG_00136","SJAG_04955","SJAG_01397","SJAG_01817","SJAG_01129","SJAG_01669","SJAG_00212"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72840,76930,81971],"is_not":false,"summary":null,"term":"GO:0019829"},{"annotations":[110637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015410"},{"annotations":[73191,82017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005388"},{"annotations":[79607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043682"},{"annotations":[109817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140581"},{"annotations":[114340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008900"},{"annotations":[72553,79695,74971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008553"},{"annotations":[75348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008554"},{"annotations":[61264,80297,81421,66542,61803,65838,69229,58435,62669,61018,61979,63353,72971,80244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046961"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + cation(out) = ADP + phosphate + cation(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transporter activity","termid":"GO:0008324"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"},{"relation_name":"is_a","term_name":"ATPase-coupled transmembrane transporter activity","termid":"GO:0042626"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_01129":null,"SJAG_01397":null,"SJAG_01400":null,"SJAG_01435":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01669":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02399":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_03850":null,"SJAG_03866":null,"SJAG_04015":null,"SJAG_04167":null,"SJAG_04258":null,"SJAG_04757":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ATPase-coupled monoatomic cation transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5251989","Reactome:R-HSA-5692480"],"synonyms":[{"name":"ATP-dependent cation transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled cation transmembrane transporter activity","type":"broad"},{"name":"cation ABC transporter","type":"narrow"},{"name":"cation-transporting ATPase activity","type":"exact"},{"name":"plasma membrane cation-transporting ATPase","type":"narrow"}],"termid":"GO:0019829","terms_by_termid":{"GO:0005388":null,"GO:0008553":null,"GO:0008554":null,"GO:0008900":null,"GO:0015410":null,"GO:0019829":null,"GO:0043682":null,"GO:0046961":null,"GO:0140581":null}}


id: GO:0002941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of type B synoviocytes by cell division, resulting in the expansion of their population. A type B synoviocyte is a fibroblast-like cell found in synovial tissues.","definition_xrefs":["PMID:9546370","PMID:10770586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synoviocyte proliferation","termid":"GO:0002941"}


id: FYPO:0007577
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the actin cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to actin cytoskeleton","synonyms":[{"name":"abnormal protein localisation to actin cytoskeleton","type":"exact"}],"termid":"FYPO:0007577"}


id: PBO:0054488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1888","termid":"PBO:0054488"}


id: MONDO:1010202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myotubular myopathy 1 that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease, non-human animal","termid":"MONDO:1012575"},{"relation_name":"is_a","term_name":"centronuclear myopathy, non-human animal","termid":"MONDO:1012963"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubular myopathy 1, non-human animal","secondary_identifiers":["OMIA:001508"],"termid":"MONDO:1010202","xrefs":{"Monarch":{"xref_id":"1010202"}}}


id: PBO:0031454
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_envelope_morphology_during_vegetative_growth","termid":"PBO:0031454"}


id: GO:0004962
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with endothelin and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:signaling","GOC:bf","GOC:dph","IUPHAR_GPCR:1283","IUPHAR_RECEPTOR:2263","IUPHAR_RECEPTOR:2265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"endothelin receptor activity","secondary_identifiers":["GO:0001599","GO:0001600"],"synonyms":[{"name":"endothelin-A receptor activity","type":"narrow"},{"name":"endothelin-B receptor activity","type":"narrow"}],"termid":"GO:0004962"}


id: PR:P87315
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hip3 gene.","definition_xrefs":["UniProtKB:P87315","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone transcription regulator 3 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.14c","synonyms":[{"name":"Spom972h-hip3","type":"exact"}],"termid":"PR:P87315"}


id: GO:0072677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an eosinophil within or between different tissues and organs of the body.","definition_xrefs":["GOC:BHF","GOC:mah","CL:0000771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte migration","termid":"GO:0097530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil migration","termid":"GO:0072677"}


id: PBO:0039291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG6 alpha-1,3-glucosyltransferase","termid":"PBO:0039291"}


id: GO:0010026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epidermal cell acquires the specialized features of a trichome cell. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","PMID:9367433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"plant epidermis development","termid":"GO:0090558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichome differentiation","secondary_identifiers":["GO:0048271"],"synonyms":[{"name":"trichome cell differentiation","type":"exact"}],"termid":"GO:0010026"}


id: PBO:0044040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate proteoglycan 4 pseudogene 12","termid":"PBO:0044040"}


id: GO:0140971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of AIM2 inflammasome complex assembly.","definition_xrefs":["PMID:33467177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"part_of","term_name":"regulation of inflammasome-mediated signaling pathway","termid":"GO:0141085"},{"relation_name":"regulates","term_name":"AIM2 inflammasome complex assembly","termid":"GO:0140970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"regulation of AIM2 inflammasome complex assembly","termid":"GO:0140971"}


id: PBO:0048924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member U, pseudogene","termid":"PBO:0048924"}


id: FYPO:0006039
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic metaphase chromosome recapture does not proceed until the kinetochore has moved all the way to the spindle pole body (SPB), but kinetochores instead pause abnormally near the SPB.","definition_xrefs":["PMID:27146110","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic metaphase chromosome recapture","termid":"FYPO:0005362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000337","FYPO:0001985","FYPO:0000641","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"incomplete mitotic metaphase chromosome recapture","synonyms":[{"name":"incomplete chromosome recapture during mitosis","type":"exact"},{"name":"incomplete chromosome recapture during mitotic metaphase","type":"exact"},{"name":"incomplete kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"incomplete metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"incomplete mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"incomplete mitotic metaphase kinetochore retrieval","type":"exact"},{"name":"incomplete sister kinetochore recapture","type":"exact"}],"termid":"FYPO:0006039"}


id: PBO:0076041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 38 like","termid":"PBO:0076041"}


id: PBO:0064395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNN interacting serine and arginine rich protein","termid":"PBO:0064395"}


id: MONDO:0017989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"His bundle tachycardia is a very rare congenital genetic tachyarrhythmia characterized by incessant tachycardia and high morbidity and mortality.","definition_xrefs":["Orphanet:3283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"His bundle tachycardia","secondary_identifiers":["SCTID:233901002","ICD9:427.89","icd11.foundation:962827983","MESH:D013613","UMLS:C0039235","MEDGEN:21066","GARD:2706","NCIT:C111646"],"synonyms":[{"name":"JET","type":"exact"},{"name":"junctional ectopic tachycardia","type":"exact"}],"termid":"MONDO:0017989","xrefs":{"Monarch":{"xref_id":"0017989"}}}


id: PBO:0049517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2AC histone family pseudogene 2","termid":"PBO:0049517"}


id: PBO:0071041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 43","termid":"PBO:0071041"}


id: GO:0044241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The whole of the physical, chemical, and biochemical processes carried out by living organisms to break down ingested lipids into components that may be easily absorbed and directed into metabolism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestion","termid":"GO:0007586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipid digestion","secondary_identifiers":["Reactome:R-HSA-192456"],"termid":"GO:0044241"}


id: MONDO:0007604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Femoral-facial syndrome is characterized by predominant femoral hypoplasia (bilateral or unilateral) and unusual facies.","definition_xrefs":["Orphanet:1988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"femoral-facial syndrome","secondary_identifiers":["icd11.foundation:505576809","MESH:C537916","SCTID:13280000","GARD:61","NORD:1136","OMIM:134780","UMLS:C0265263","MEDGEN:120523","ICD9:759.89"],"synonyms":[{"name":"FFS","type":"exact"},{"name":"FHUFS","type":"exact"},{"name":"Femoral Facial Syndrome","type":"exact"},{"name":"femoral dysgenesis, bilateral","type":"related"},{"name":"femoral facial syndrome","type":"exact"},{"name":"femoral hypoplasia unusual facies syndrome","type":"related"},{"name":"femoral hypoplasia-unusual facies syndrome","type":"exact"},{"name":"femoral-facial syndrome","type":"exact"}],"termid":"MONDO:0007604","xrefs":{"Monarch":{"xref_id":"0007604"}}}


id: PBO:0053600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 629","termid":"PBO:0053600"}


id: MONDO:0031115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyskinesia with orofacial involvement","secondary_identifiers":["UMLS:C5908309","MEDGEN:1859334","OMIMPS:606703"],"synonyms":[{"name":"ADCY5-Related Dyskinesia","type":"exact"}],"termid":"MONDO:0031115","xrefs":{"Monarch":{"xref_id":"0031115"}}}


id: SO:0001245
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The stem of the hairpin loop formed by folding of the pre-miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA_primary_transcript_region","termid":"SO:0001243"},{"relation_name":"part_of","term_name":"pre_miRNA","termid":"SO:0001244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miRNA_stem","synonyms":[{"name":"miRNA stem","type":"exact"}],"termid":"SO:0001245"}


id: MONDO:0016369
data:
  {"annotated_genes":["SJAG_04995","SJAG_02200"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86872,86873],"is_not":false,"summary":null,"term":"MONDO:0016369"}]},"cv_name":"mondo","definition":"Rothmund-Thomson syndrome type 2 is a subform of Rothmund-Thomson syndrome (RTS) presenting with a characteristic facial rash (poikiloderma) and frequently associated with short stature, sparse scalp hair, sparse or absent eyelashes and/or eyebrows, congenital bone defects and an increased risk of osteosarcoma in childhood and squamous cell carcinoma later in life.","definition_xrefs":["Orphanet:221016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"Rothmund-Thomson syndrome","termid":"MONDO:0010002"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02200":null,"SJAG_04995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"Rothmund-Thomson syndrome type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17135","NCIT:C178827","OMIM:268400","UMLS:C5203410","icd11.foundation:2111040755","MEDGEN:1684753"],"synonyms":[{"name":"RTS2","type":"exact"},{"name":"Rothmund-Thomson syndrome, type 2","type":"exact"},{"name":"poikiloderma of Rothmund-Thomson type 2","type":"exact"}],"termid":"MONDO:0016369","terms_by_termid":{"MONDO:0016369":null},"xrefs":{"Monarch":{"xref_id":"0016369"}}}


id: PBO:0030353
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_salt_stress","termid":"PBO:0030353"}


id: FYPO:0002871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a growing cell tip is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell tip during vegetative growth","termid":"FYPO:0001586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to growing cell tip","synonyms":[{"name":"decreased protein localisation to growing cell tip","type":"exact"},{"name":"decreased protein localization to growing cell end","type":"exact"},{"name":"decreased protein localization to growing cell tip during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to growing cell tip during vegetative growth","type":"exact"},{"name":"reduced protein localization to growing cell tip","type":"exact"}],"termid":"FYPO:0002871"}


id: PBO:0063922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide-3-kinase regulatory subunit 1","termid":"PBO:0063922"}


id: GO:0009916
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the oxidation of ubiquinol by diverting electrons from the standard electron transfer chain, transferring them from ubiquinol to oxygen and generating water as the product.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"alternative oxidase activity","termid":"GO:0009916"}


id: PBO:0073776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 9","termid":"PBO:0073776"}


id: GO:0004675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.","definition_xrefs":["RHEA:18673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"transmembrane receptor protein kinase activity","termid":"GO:0019199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0004672","GO:0038023","GO:0016740","GO:0003674","GO:0003824","GO:0016301","GO:0140096"],"is_obsolete":false,"name":"transmembrane receptor protein serine/threonine kinase activity","secondary_identifiers":["EC:2.7.11.30","Reactome:R-HSA-170868","MetaCyc:2.7.11.30-RXN","Reactome:R-HSA-201476","Reactome:R-HSA-198732"],"synonyms":[{"name":"receptor protein serine/threonine kinase activity","type":"related"},{"name":"receptor serine/threonine protein kinase activity","type":"related"}],"termid":"GO:0004675"}


id: GO:0007315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the specialized cytoplasm found at the poles of the egg. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasm organization","termid":"GO:0007028"},{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"oocyte anterior/posterior axis specification","termid":"GO:0007314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"pole plasm assembly","secondary_identifiers":["GO:0048113"],"termid":"GO:0007315"}


id: PBO:0034574
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_stable_microtubule_bundle","termid":"PBO:0034574"}


id: PBO:0053403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 333","termid":"PBO:0053403"}


id: FYPO:0007286
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the late endosome membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:12868054","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to late endosome","termid":"FYPO:0007725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to late endosome membrane","synonyms":[{"name":"normal protein localisation to late endosome membrane","type":"exact"},{"name":"normal protein localization to late endosome membrane during mitotic cell cycle","type":"related"},{"name":"normal protein localization to late endosome membrane during vegetative growth","type":"exact"},{"name":"normal protein localization to prevacuolar compartment membrane","type":"exact"}],"termid":"FYPO:0007286"}


id: PBO:0051375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3/OR2-268 (non-functional)","termid":"PBO:0051375"}


id: PR:000027503
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitogen-activated protein kinase sty1 phosphorylated 1 in Schizosaccharomyces pombe. Phosphorylated on TxY motif by MAPK kinase (Wis1). Example: UniProtKB:Q09892-1, Thr-171, MOD:00047|Tyr-173, MOD:00048.","definition_xrefs":["PMID:20729203","PMID:7501024","PMID:9251044","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitogen-activated protein kinase HOG1","termid":"PR:000027499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sty1/Phos(T171,Y173)","pombase_gene_id":"SPAC24B11.06c","synonyms":[{"name":"PomBase_original_PRO_term_name: mitogen-activated protein kinase sty1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-HOG1/Phos:1","type":"exact"},{"name":"active PHH1","type":"exact"},{"name":"active spc1","type":"exact"},{"name":"active sty1","type":"exact"},{"name":"sty1/Phos(T171,Y173)","type":"exact"}],"termid":"PR:000027503"}


id: MONDO:0003176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cervical adenoid cystic carcinoma (obsolete MONDO:0003176)","termid":"MONDO:0003176","xrefs":{"Monarch":{"xref_id":"0003176"}}}


id: GO:2000759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of N-terminal peptidyl-lysine acetylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein maturation","termid":"GO:1903317"},{"relation_name":"is_a","term_name":"regulation of peptidyl-lysine acetylation","termid":"GO:2000756"},{"relation_name":"regulates","term_name":"N-terminal peptidyl-lysine acetylation","termid":"GO:0018076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of N-terminal peptidyl-lysine acetylation","termid":"GO:2000759"}


id: FYPO:0005348
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which spindle pole body (SPB)-led chromosome movement is abnormal. SPB-led chromosome movement is a microtubule-based process in which chromosomes migrate as a result of rapid spindle pole body (SPB) and centrosome oscillations during mitotic interphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body localization","termid":"FYPO:0000534"},{"relation_name":"is_a","term_name":"abnormal microtubule-based movement during vegetative growth","termid":"FYPO:0005461"},{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal spindle pole body-led chromosome movement during mitotic interphase","synonyms":[{"name":"abnormal SPB-led chromosome movement during mitotic interphase","type":"exact"},{"name":"abnormal maintenance of SPB localization","type":"related"},{"name":"abnormal maintenance of mitotic spindle pole body localization","type":"related"},{"name":"abnormal mitotic SPB oscillation during mitotic interphase","type":"exact"},{"name":"abnormal mitotic spindle pole body movement during mitotic interphase","type":"exact"},{"name":"abnormal mitotic spindle pole body oscillation during mitotic interphase","type":"exact"},{"name":"abnormal spindle pole body-led chromosome movement during interphase of mitotic cell cycle","type":"related"},{"name":"abnormal spindle pole body-led chromosome movement during mitotic interphase during vegetative growth","type":"exact"},{"name":"increased spindle pole body-led chromosome movement during interphase of mitotic cell cycle","type":"related"}],"termid":"FYPO:0005348"}


id: PR:O74358
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- apc13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28E12.01c","synonyms":[{"name":"20S cyclosome/APC complex protein apc13 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-apc13","type":"exact"}],"termid":"PR:O74358"}


id: PBO:0081213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger matrin-type 3","termid":"PBO:0081213"}


id: MONDO:0004475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, usually aggressive, primary thymic carcinoma, characterized by the presence of carcinoma cells with clear cytoplasm.","definition_xrefs":["NCIT:C6462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thymic carcinoma","termid":"MONDO:0006451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"thymus clear cell carcinoma","secondary_identifiers":["DOID:8137","MEDGEN:272488","UMLS:C1333069"],"synonyms":[{"name":"Thymus clear cell carcinoma","type":"exact"},{"name":"clear cell carcinoma of Thymus","type":"exact"},{"name":"clear cell carcinoma of the Thymus","type":"exact"},{"name":"thymic clear cell carcinoma","type":"exact"},{"name":"thymus clear cell carcinoma","type":"exact"}],"termid":"MONDO:0004475","xrefs":{"Monarch":{"xref_id":"0004475"}}}


id: PBO:0018184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leptomycin transmembrane transporter Pmd1","termid":"PBO:0018184"}


id: MONDO:0008894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cataract-hypertrichosis-intellectual disability syndrome is characterized by congenital cataract, generalized hypertrichosis and intellectual deficit. It has been described in two Egyptian sibs born to consanguineous parents. It is transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:1375"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hypertrichosis","termid":"MONDO:0019280"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cataract-hypertrichosis-intellectual disability syndrome","secondary_identifiers":["SCTID:722379001","OMIM:211770","MESH:C537959","MEDGEN:167117","GARD:1052","UMLS:C0796282"],"synonyms":[{"name":"CAHMR syndrome","type":"exact"},{"name":"cataract, hypertrichosis, intellectual disability syndrome","type":"related"},{"name":"cataract, hypertrichosis, mental retardation syndrome","type":"related"}],"termid":"MONDO:0008894","xrefs":{"Monarch":{"xref_id":"0008894"}}}


id: MONDO:0011580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia-hypogonadism syndrome","termid":"MONDO:0008935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"cerebellar ataxia and hypergonadotropic hypogonadism","secondary_identifiers":["GARD:15384","UMLS:C1854064","MEDGEN:381328","MESH:C565308","OMIM:605672"],"synonyms":[{"name":"cerebellar ataxia and hypergonadotropic hypogonadism","type":"exact"}],"termid":"MONDO:0011580","xrefs":{"Monarch":{"xref_id":"0011580"}}}


id: PBO:0059532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Asp (GAU/C)","termid":"PBO:0059532"}


id: PR:A6X995
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC417.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:A6X995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C417.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.15","synonyms":[{"name":"Spom972h-SPCC417.15","type":"exact"}],"termid":"PR:A6X995"}


id: MOD:00445
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to L-homoarginine, such as reaction with O-methylisourea.","definition_xrefs":["PubMed:11078590","PubMed:11821862","Unimod:52","PubMed:11085420","OMSSA:53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-homoarginine","synonyms":[{"name":"Guanidination","type":"related"},{"name":"Guanidinyl","type":"related"},{"name":"guanidinationk","type":"exact"}],"termid":"MOD:00445"}


id: PR:O74865
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dph7 gene.","definition_xrefs":["UniProtKB:O74865","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthine methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.15","synonyms":[{"name":"Spom972h-dph7","type":"exact"},{"name":"WD repeat-containing protein rrt2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"diphthamide biosynthesis protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74865"}


id: PR:O36016
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ypa1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O36016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase 2A activator 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.04","synonyms":[{"name":"PPIase PTPA-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ypa1","type":"exact"},{"name":"peptidyl-prolyl cis-trans isomerase PTPA-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"phosphotyrosyl phosphatase activator 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rotamase PTPA-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O36016"}


id: MONDO:0858987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive spastic paraplegia type 82 (obsolete MONDO:0858987)","termid":"MONDO:0858987","xrefs":{"Monarch":{"xref_id":"0858987"}}}


id: MONDO:1010645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemophilia B that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia B, non-human animal","termid":"MONDO:1010075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemophilia B, horse","secondary_identifiers":["OMIA:000438-9796"],"termid":"MONDO:1010645","xrefs":{"Monarch":{"xref_id":"1010645"}}}


id: GO:0015212
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of cytidine, cytosine riboside, from one side of a membrane to the other.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside transmembrane transporter activity","termid":"GO:0015214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"cytidine transmembrane transporter activity","termid":"GO:0015212"}


id: PBO:0054499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1899","termid":"PBO:0054499"}


id: PBO:0063728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHACTR2 antisense RNA 1","termid":"PBO:0063728"}


id: PBO:0062795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORMDL sphingolipid biosynthesis regulator 1","termid":"PBO:0062795"}


id: PBO:0050234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 12","termid":"PBO:0050234"}


id: GO:0035676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an anterior lateral line neuromast hair cell over time, from its formation to the mature structure. A neuromast hair cell is a hair cell that acts as a sensory receptor of the neuromast; it is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["ISBN:0125296509","ISBN:0387968377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast hair cell development","termid":"GO:0035675"},{"relation_name":"part_of","term_name":"anterior lateral line neuromast hair cell differentiation","termid":"GO:0048903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line neuromast hair cell development","termid":"GO:0035676"}


id: GO:0031723
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CXCR4 chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CXCR chemokine receptor binding","termid":"GO:0045236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"CXCR4 chemokine receptor binding","synonyms":[{"name":"CXCR4 chemokine receptor ligand","type":"narrow"},{"name":"stromal cell-derived factor 1 receptor binding","type":"exact"}],"termid":"GO:0031723"}


id: PBO:0000672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase (predicted)","termid":"PBO:0000672"}


id: PBO:0062570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AK member 1 pseudogene","termid":"PBO:0062570"}


id: GO:0042942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which of D-serine, the D-enantiomer of 2-amino-3-hydroxypropanoic acid is transported across a lipid bilayer, from one side of a membrane to the other, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"serine transport","termid":"GO:0032329"},{"relation_name":"is_a","term_name":"D-amino acid transport","termid":"GO:0042940"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"D-serine transmembrane transport","termid":"GO:0042942"}


id: PBO:0073129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC14 like 1 pseudogene 1","termid":"PBO:0073129"}


id: GO:0110088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that occurs in a hippocampal neuron.","definition_xrefs":["PMID:18940801","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron apoptotic process","termid":"GO:0051402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hippocampal neuron apoptotic process","termid":"GO:0110088"}


id: MONDO:0000925
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lung with reduced markings on its chest radiograph and increased areas of transradiancy (hyperlucency). A hyperlucent lung is usually associated with pulmonary emphysema or pneumothorax.","definition_xrefs":["MESH:D019568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary emphysema","termid":"MONDO:0004849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperlucent lung","secondary_identifiers":["MEDGEN:101178","DOID:10032","UMLS:C0524799"],"termid":"MONDO:0000925","xrefs":{"Monarch":{"xref_id":"0000925"}}}


id: GO:0009222
data:
  {"annotated_genes":["SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a pyrimidine ribonucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide catabolic process","termid":"GO:0006244"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"},{"relation_name":"is_a","term_name":"ribonucleotide catabolic process","termid":"GO:0009261"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine ribonucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pyrimidine ribonucleotide breakdown","type":"exact"},{"name":"pyrimidine ribonucleotide catabolism","type":"exact"},{"name":"pyrimidine ribonucleotide degradation","type":"exact"}],"termid":"GO:0009222","terms_by_termid":{"GO:0006256":null}}


id: MONDO:0014342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Female infertility due to zona pellucida defect is a rare, genetic, female infertility disorder characterized by the presence of abnormal oocytes that lack a zona pellucida. Affected individuals are unable to conceive despite having normal menstrual cycles and sex hormone levels, as well as no obstructions in the fallopian tubes or defects of the uterus or adnexa.","definition_xrefs":["Orphanet:404466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited oocyte maturation defect","termid":"MONDO:0014769"},{"relation_name":"is_a","term_name":"female infertility","termid":"MONDO:0021124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"female infertility due to zona pellucida defect","secondary_identifiers":["GARD:17675","OMIM:615774","UMLS:C4014291","MEDGEN:862728"],"synonyms":[{"name":"OOMD","type":"related"},{"name":"OOMD1","type":"related"},{"name":"oocyte maturation defect","type":"related"},{"name":"oocyte maturation defect 1","type":"related"}],"termid":"MONDO:0014342","xrefs":{"Monarch":{"xref_id":"0014342"}}}


id: MONDO:1010558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spina bifida that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida, non-human animal","termid":"MONDO:1010047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spina bifida, cattle","secondary_identifiers":["OMIA:000933-9913"],"termid":"MONDO:1010558","xrefs":{"Monarch":{"xref_id":"1010558"}}}


id: FYPO:0000888
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000877"},{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","termid":"FYPO:0000886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0002494","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 dimethylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at pericentric region during vegetative growth","type":"related"},{"name":"decreased histone H3-K9 dimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"decreased histone H3K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000888"}


id: MOD:01148
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks the N6-amino of a peptidyl lysine with the carboxyl-terminal glycine of a ubiquitin.","definition_xrefs":["PubMed:11125103","PubMed:18688235"],"direct_ancestors":[{"relation_name":"contains","term_name":"N6-glycyl-L-lysine","termid":"MOD:00134"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"ubiquitinylated lysine","termid":"MOD:01148"}


id: GO:1903838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of mRNA 3'-UTR binding.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:19575011","GOC:als"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mRNA 3'-UTR binding (obsolete GO:1903838)","synonyms":[{"name":"down regulation of mRNA 3' UTR binding","type":"exact"},{"name":"down regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"down-regulation of mRNA 3' UTR binding","type":"exact"},{"name":"down-regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"downregulation of mRNA 3' UTR binding","type":"exact"},{"name":"downregulation of mRNA 3'-UTR binding","type":"exact"},{"name":"inhibition of mRNA 3' UTR binding","type":"narrow"},{"name":"inhibition of mRNA 3'-UTR binding","type":"narrow"},{"name":"negative regulation of mRNA 3' UTR binding","type":"exact"}],"termid":"GO:1903838"}


id: PBO:0031057
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_cell_division,_normal_cell_morphology","termid":"PBO:0031057"}


id: PBO:0087634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the EGO/GSE complex; the vacuolar/endosomal membrane associated EGO/GSE complex regulates exit from rapamycin-induced growth arrest, stimulating microautophagy and sorting of Gap1p from the endosome to the plasma membrane; loss results in a defect in vacuolar acidification","termid":"PBO:0087634"}


id: GO:0052088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts a jasmonic acid-mediated signal transduction pathway in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:35698792","GOC:mtg_pamgo_17jul06","PMID:29222513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host signal transduction pathway","termid":"GO:0052027"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host innate immune response","termid":"GO:0052167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host jasmonic acid signaling","secondary_identifiers":["GO:0052073","GO:0052082","GO:0052266","GO:0052267","GO:0052069","GO:0052443","GO:0052068","GO:0052271","GO:0052283"],"synonyms":[{"name":"activation by organism of defense-related host SA-mediated signal transduction pathway","type":"narrow"},{"name":"activation by organism of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"activation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"down regulation by symbiont of host jasmonic acid-mediated defense response","type":"narrow"},{"name":"down-regulation by symbiont of host jasmonic acid-mediated defense response","type":"narrow"},{"name":"downregulation by symbiont of host jasmonic acid-mediated defense response","type":"narrow"},{"name":"induction by organism of defense-related host SA-mediated signal transduction pathway","type":"narrow"},{"name":"induction by organism of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"induction by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"inhibition by symbiont of host jasmonic acid-mediated defense response","type":"narrow"},{"name":"modulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction","type":"narrow"},{"name":"modulation by organism of host JA-mediated defense response","type":"narrow"},{"name":"modulation by organism of jasmonic acid-mediated defense response of other organism involved in symbiotic interaction","type":"narrow"},{"name":"modulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"negative regulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction","type":"narrow"},{"name":"negative regulation by organism of jasmonic acid-mediated defense response of other organism involved in symbiotic interaction","type":"narrow"},{"name":"negative regulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"negative regulation by symbiont of host jasmonic acid-mediated defense response","type":"narrow"},{"name":"positive regulation by organism of defense-related host SA-mediated signal transduction pathway","type":"narrow"},{"name":"positive regulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction","type":"narrow"},{"name":"positive regulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"stimulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"suppression by organism of host JA-mediated defense response","type":"exact"},{"name":"suppression by symbiont of host jasmonic acid-mediated defense response","type":"related"},{"name":"symbiont defense to host-produced jasmonic acid","type":"exact"},{"name":"up regulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"up-regulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"upregulation by organism of defense-related host SA-mediated signal transduction pathway","type":"narrow"},{"name":"upregulation by organism of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"upregulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"}],"termid":"GO:0052088"}


id: PBO:0052628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 6B","termid":"PBO:0052628"}


id: MONDO:1012173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dysphagia-associated muscular dystrophy, non-human animal","termid":"MONDO:1011790"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysphagia-associated muscular dystrophy, dog","secondary_identifiers":["OMIA:000681-9615"],"termid":"MONDO:1012173","xrefs":{"Monarch":{"xref_id":"1012173"}}}


id: GO:0061357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the controlled release of a Wnt protein from a cell.","definition_xrefs":["PMID:19223472","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"is_a","term_name":"positive regulation of signaling","termid":"GO:0023056"},{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"regulation of Wnt protein secretion","termid":"GO:0061356"},{"relation_name":"positively_regulates","term_name":"Wnt protein secretion","termid":"GO:0061355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Wnt protein secretion","termid":"GO:0061357"}


id: PBO:0067215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 282, pseudogene","termid":"PBO:0067215"}


id: PR:P37818
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An arginase-2, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginase Car1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP26C9.02c","secondary_identifiers":["UniProtKB:P37818"],"synonyms":[{"name":"SPBP26C9.02c","type":"related"},{"name":"Spom972h-ARG2","type":"exact"}],"termid":"PR:P37818"}


id: GO:0030270
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,6,7,8-tetrahydromethanopterin + N-formylmethanofuran + H+ = N(5)-formyl-5,6,7,8-tetrahydromethanopterin + methanofuran.","definition_xrefs":["RHEA:18061","EC:2.3.1.101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"formylmethanofuran-tetrahydromethanopterin N-formyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.101-RXN","GO:0018714","UM-BBD_reactionID:r0346","KEGG_REACTION:R03390"],"synonyms":[{"name":"FTR","type":"related"},{"name":"N-formylmethanofuran(CHO-MFR):tetrahydromethanopterin(H4MPT) formyltransferase activity","type":"related"},{"name":"formylmethanofuran-tetrahydromethanopterin formyltransferase activity","type":"related"},{"name":"formylmethanofuran:5,6,7,8-tetrahydromethanopterin 5-formyltransferase activity","type":"related"},{"name":"formylmethanofuran:5,6,7,8-tetrahydromethanopterin N5-formyltransferase activity","type":"related"},{"name":"formylmethanofuran:tetrahydromethanopterin formyltransferase activity","type":"related"}],"termid":"GO:0030270"}


id: PBO:0070621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 5","termid":"PBO:0070621"}


id: PBO:0054513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1913","termid":"PBO:0054513"}


id: MONDO:0018959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Potassium-aggravated myotonia (PAM) is a muscular channelopathy presenting with a pure myotonia dramatically aggravated by potassium ingestion, with variable cold sensitivity and no episodic weakness. This group includes three forms: myotonia fluctuans, myotonia permanens, and acetazolamide-responsive myotonia.","definition_xrefs":["Orphanet:612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotonic syndrome","termid":"MONDO:0016120"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"},{"relation_name":"is_a","term_name":"SCN4A-related channelopathy","termid":"MONDO:0800468"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium-aggravated myotonia","secondary_identifiers":["SCTID:702355008","MESH:C538353","UMLS:C2931826","OMIM:608390","NANDO:1200500","NCIT:C122788","icd11.foundation:1707250468","GARD:4459","MEDGEN:444151"],"synonyms":[{"name":"K+-aggravated myotonia","type":"exact"},{"name":"K-aggravated myotonia","type":"exact"},{"name":"Laryngospasm, Severe Neonatal Episodic","type":"related"},{"name":"MYOTONIA, POTASSIUM-AGGRAVATED","type":"related"},{"name":"Myotonia Congenita, Acetazolamide-Responsive","type":"related"},{"name":"Myotonia Congenita, Atypical","type":"related"},{"name":"Myotonia Fluctuans","type":"related"},{"name":"Myotonia Permanens","type":"related"},{"name":"PAM","type":"exact"},{"name":"Potassium aggravated myotonia","type":"exact"},{"name":"Sodium Channel Muscle Disease","type":"related"},{"name":"myotonia congenita, atypical, acetazolamide-responsive","type":"exact"}],"termid":"MONDO:0018959","xrefs":{"Monarch":{"xref_id":"0018959"}}}


id: PR:O14107
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dni1 gene.","definition_xrefs":["UniProtKB:O14107","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell fusion protein dni1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.07","synonyms":[{"name":"Spom972h-dni1","type":"exact"},{"name":"delayed minus-nitrogen induction protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14107"}


id: PBO:0090997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein Rsa3","termid":"PBO:0090997"}


id: GO:0015982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of coupled solute translocation in which two solutes equilibrate across an osmotic barrier, the translocation of solute being coupled to the translocation of the other in the opposite direction.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete antiport (obsolete GO:0015982)","synonyms":[{"name":"antiport","type":"exact"}],"termid":"GO:0015982"}


id: PBO:0091936
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIDdle","termid":"PBO:0091936"}


id: PBO:0064407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 2","termid":"PBO:0064407"}


id: GO:0045198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of the apicobasal polarity of an epithelial cell.","definition_xrefs":["GOC:tb","GOC:bf","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarized epithelial cell differentiation","termid":"GO:0030859"},{"relation_name":"is_a","term_name":"establishment of apical/basal cell polarity","termid":"GO:0035089"},{"relation_name":"is_a","term_name":"establishment or maintenance of epithelial cell apical/basal polarity","termid":"GO:0045197"},{"relation_name":"is_a","term_name":"establishment of epithelial cell polarity","termid":"GO:0090162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of epithelial cell apical/basal polarity","termid":"GO:0045198"}


id: GO:0019061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which an incoming virus is disassembled in the host cell to release a replication-competent viral genome.","definition_xrefs":["PMID:8162442","GOC:plm","ISBN:0781702534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uncoating of virus","secondary_identifiers":["Reactome:R-HSA-162585","Reactome:R-HSA-168336"],"synonyms":[{"name":"viral uncoating","type":"exact"}],"termid":"GO:0019061"}


id: GO:1901854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 5,6,7,8-tetrahydrosarcinapterin.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00069","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pteridine-containing compound catabolic process","termid":"GO:0042560"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"tricarboxylic acid catabolic process","termid":"GO:0072352"},{"relation_name":"is_a","term_name":"5,6,7,8-tetrahydrosarcinapterin metabolic process","termid":"GO:1901853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"5,6,7,8-tetrahydrosarcinapterin catabolic process","synonyms":[{"name":"5,6,7,8-tetrahydrosarcinapterin breakdown","type":"exact"},{"name":"5,6,7,8-tetrahydrosarcinapterin catabolism","type":"exact"},{"name":"5,6,7,8-tetrahydrosarcinapterin degradation","type":"exact"}],"termid":"GO:1901854"}


id: GO:0140945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl4-[histone H3] + S-adenosyl-L-methionine = H+ + N6-methyl-L-lysyl4-[histone H3] + S-adenosyl-L-homocysteine. This reaction is the addition of a single methyl group to the unmethylated lysine residue at position 4 of histone H3, producing histone H3K4me.","definition_xrefs":["RHEA:60264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K4 methyltransferase activity","termid":"GO:0042800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0008276"}],"interesting_parent_ids":["GO:0003674","GO:0008276","GO:0140096","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"histone H3K4 monomethyltransferase activity","secondary_identifiers":["EC:2.1.1.364"],"synonyms":[{"name":"histone H3K4 monomethylase activity","type":"exact"},{"name":"histone H4-K4 methylation","type":"broad"},{"name":"histone H4K4 methylation","type":"broad"},{"name":"histone lysine N-monomethyltransferase activity (H3-K4 specific)","type":"exact"}],"termid":"GO:0140945"}


id: GO:1990376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A positive regulation of transcription from RNA polymerase II promoter in response to nitrogen starvation that results in negative regulation of mitotic G1/S transition.","definition_xrefs":["PMID:9135083"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G1/S transition of mitotic cell cycle by positive regulation of transcription from RNA polymerase II promoter in response to nitrogen starvation (obsolete GO:1990376)","termid":"GO:1990376"}


id: MONDO:0004390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormally low intraocular pressure often related to chronic inflammation (uveitis).","definition_xrefs":["MESH:D015814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ocular hypotension","secondary_identifiers":["MEDGEN:10424","SCTID:19721008","ICD9:360.30","UMLS:C0028841","DOID:790","ICD9:360.3"],"synonyms":[{"name":"hypotony of eye","type":"exact"}],"termid":"MONDO:0004390","xrefs":{"Monarch":{"xref_id":"0004390"}}}


id: PBO:0055045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2460","termid":"PBO:0055045"}


id: GO:0000354
data:
  {"annotated_genes":["SJAG_04230"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119842],"is_not":false,"summary":null,"term":"GO:0000354"}]},"cv_name":"biological_process","definition":"Assembly of a spliceosomal complex containing the intact pre-mRNA and all of the spliceosomal snRNPs. This occurs when the tri-snRNP associates with the pre-mRNA and associated snRNPs in an ATP-dependent manner.","definition_xrefs":["ISBN:0879695897","GOC:mtg_mpo","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"spliceosomal complex assembly","termid":"GO:0000245"},{"relation_name":"part_of","term_name":"mRNA cis splicing, via spliceosome","termid":"GO:0045292"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0016071","GO:0044085","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"cis assembly of pre-catalytic spliceosome","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000360","GO:0000361"],"synonyms":[{"name":"cis assembly of U12-type pre-catalytic spliceosome","type":"narrow"},{"name":"cis assembly of U2-type pre-catalytic spliceosome","type":"narrow"},{"name":"formation of spliceosomal A2-1 complex","type":"narrow"},{"name":"formation of spliceosomal B1 complex","type":"narrow"},{"name":"spliceosomal A2-1 complex biosynthesis","type":"narrow"},{"name":"spliceosomal A2-1 complex formation","type":"narrow"},{"name":"spliceosomal B1 complex biosynthesis","type":"narrow"},{"name":"spliceosomal B1 complex formation","type":"narrow"}],"termid":"GO:0000354","terms_by_termid":{"GO:0000354":null}}


id: GO:0052636
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an arabinosyl group from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"arabinosyltransferase activity","synonyms":[{"name":"arabinosyl transferase activity","type":"exact"}],"termid":"GO:0052636"}


id: PBO:0061130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMD3 ribosome export adaptor","termid":"PBO:0061130"}


id: SO:0001373
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"1_methyl_3_3_amino_3_carboxypropyl_pseudouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one_methyl_three_three_amino_three_carboxypropyl_pseudouridine","secondary_identifiers":["RNAMOD:086"],"synonyms":[{"name":"1-methyl-3-(3-amino-3-carboxypropyl) pseudouridine","type":"exact"},{"name":"m1acp3Y","type":"exact"}],"termid":"SO:0001373"}


id: MONDO:0020866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the nasopharynx by Corynebacterium diphtheriae.","definition_xrefs":["NCIT:C34547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nasopharyngeal disorder","termid":"MONDO:0004821"},{"relation_name":"is_a","term_name":"diphtheria","termid":"MONDO:0005504"},{"relation_name":"is_a","term_name":"respiratory tract infectious disorder","termid":"MONDO:0024355"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasopharyngeal diphtheria","secondary_identifiers":["MEDGEN:4337","ICD9:032.1","SCTID:75589004","UMLS:C0012558"],"synonyms":[{"name":"Nasopharyngeal Diphtheria","type":"related"},{"name":"Nasopharyngeal diphtheria","type":"related"},{"name":"nasopharyngeal diphtheria","type":"exact"}],"termid":"MONDO:0020866","xrefs":{"Monarch":{"xref_id":"0020866"}}}


id: GO:1904394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of skeletal muscle acetylcholine-gated channel clustering.","definition_xrefs":["PMID:7722643","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of receptor clustering","termid":"GO:1903910"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle acetylcholine-gated channel clustering","termid":"GO:1904393"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle acetylcholine-gated channel clustering","termid":"GO:0071340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle acetylcholine-gated channel clustering","synonyms":[{"name":"down regulation of skeletal muscle AChR clustering","type":"exact"},{"name":"down regulation of skeletal muscle acetylcholine-gated channel clustering","type":"exact"},{"name":"down regulation of skeletal muscle nicotinic acetylcholine receptor clustering","type":"exact"},{"name":"down-regulation of skeletal muscle AChR clustering","type":"exact"},{"name":"down-regulation of skeletal muscle acetylcholine-gated channel clustering","type":"exact"},{"name":"down-regulation of skeletal muscle nicotinic acetylcholine receptor clustering","type":"exact"},{"name":"downregulation of skeletal muscle AChR clustering","type":"exact"},{"name":"downregulation of skeletal muscle acetylcholine-gated channel clustering","type":"exact"},{"name":"downregulation of skeletal muscle nicotinic acetylcholine receptor clustering","type":"exact"},{"name":"inhibition of skeletal muscle AChR clustering","type":"narrow"},{"name":"inhibition of skeletal muscle acetylcholine-gated channel clustering","type":"narrow"},{"name":"inhibition of skeletal muscle nicotinic acetylcholine receptor clustering","type":"narrow"},{"name":"negative regulation of skeletal muscle AChR clustering","type":"exact"},{"name":"negative regulation of skeletal muscle nicotinic acetylcholine receptor clustering","type":"exact"}],"termid":"GO:1904394"}


id: PBO:0046048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3E pseudogene 1","termid":"PBO:0046048"}


id: GO:1902026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cartilage condensation.","definition_xrefs":["PMID:17202865","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cartilage condensation","termid":"GO:0001502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cartilage condensation","termid":"GO:1902026"}


id: FYPO:0004308
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which CENP-A-containing chromatin organization is abnormal.","definition_xrefs":["PomBase:mah","GO:0061641","PMID:9230309","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000641","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal CENP-A containing chromatin organization","synonyms":[{"name":"abnormal CENP-A containing chromatin organisation","type":"exact"},{"name":"abnormal CENP-A containing chromatin organization during mitotic cell cycle","type":"related"},{"name":"abnormal CENP-A containing chromatin organization during vegetative growth","type":"exact"},{"name":"abnormal chromatin organization at centromere central core","type":"related"}],"termid":"FYPO:0004308"}


id: MONDO:0030047
data:
  {"annotated_genes":["SJAG_00420"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87238],"is_not":false,"summary":null,"term":"MONDO:0030047"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00420":null},"genotype_count":0,"is_obsolete":false,"name":"microcephaly, developmental delay, and brittle hair syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618891","MEDGEN:1718781","UMLS:C5394425"],"synonyms":[{"name":"MDBH","type":"exact"},{"name":"MICROCEPHALY, DEVELOPMENTAL DELAY, AND BRITTLE HAIR SYNDROME","type":"exact"},{"name":"microcephaly, developmental delay, and brittle hair syndrome","type":"exact"}],"termid":"MONDO:0030047","terms_by_termid":{"MONDO:0030047":null},"xrefs":{"Monarch":{"xref_id":"0030047"}}}


id: PBO:0057580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 877","termid":"PBO:0057580"}


id: GO:1903544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a butyrate stimulus.","definition_xrefs":["GO_REF:0000071","PMID:9734870","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to butyrate","termid":"GO:1903544"}


id: PATO:0020002
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual or a population based upon genotypic composition that confers the capability for an organism to differentiate female gonads.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genotypic sex","termid":"PATO:0020000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female genotypic sex","termid":"PATO:0020002"}


id: PBO:0083298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps 3' end of essential PRP21 gene encoding a subunit of the SF3a splicing factor complex","termid":"PBO:0083298"}


id: PR:Q92367
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1652.02 gene.","definition_xrefs":["UniProtKB:Q92367","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino-acid permease 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1652.02","synonyms":[{"name":"Spom972h-SPBC1652.02","type":"exact"}],"termid":"PR:Q92367"}


id: PBO:0077708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"troponin T1, slow skeletal type","termid":"PBO:0077708"}


id: GO:0031927
data:
  {"annotated_genes":["SJAG_02962","SJAG_02152","SJAG_03652","SJAG_03808"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92019,92020,119484,120786],"is_not":false,"summary":null,"term":"GO:0031927"}]},"cv_name":"molecular_function","definition":"Enables the transfer of pyridoxamine from one side of a membrane to the other. Pyridoxamine, 4-(aminomethyl)-5-(hydroxymethyl)-2-methylpyridin-3-ol, is one of the vitamin B6 compounds. Pyridoxal, pyridoxamine and pyridoxine are collectively known as vitamin B6, and are efficiently converted to the biologically active form of vitamin B6, pyridoxal phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02152":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"pyridoxamine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031927","terms_by_termid":{"GO:0031927":null}}


id: PBO:0067558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 711, pseudogene","termid":"PBO:0067558"}


id: PBO:0087926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor that stimulates expression of proteasome genes; Rpn4p levels are in turn regulated by the 26S proteasome in a negative feedback control mechanism; RPN4 is transcriptionally regulated by various stress responses; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087926"}


id: PBO:0046064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3J pseudogene 3","termid":"PBO:0046064"}


id: PBO:0056113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase like 1","termid":"PBO:0056113"}


id: PBO:0043639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 2","termid":"PBO:0043639"}


id: PBO:0002673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing associated factor Saf3","termid":"PBO:0002673"}


id: MONDO:1012383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"trapped neutrophil syndrome, non-human animal","termid":"MONDO:1011700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trapped neutrophil syndrome, dog","secondary_identifiers":["OMIA:001428-9615"],"termid":"MONDO:1012383","xrefs":{"Monarch":{"xref_id":"1012383"}}}


id: PBO:0040255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATG10 antisense RNA 1","termid":"PBO:0040255"}


id: GO:0031393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of prostaglandin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of prostaglandin biosynthetic process","termid":"GO:0031392"},{"relation_name":"is_a","term_name":"negative regulation of fatty acid biosynthetic process","termid":"GO:0045717"},{"relation_name":"negatively_regulates","term_name":"prostaglandin biosynthetic process","termid":"GO:0001516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of prostaglandin biosynthetic process","synonyms":[{"name":"down regulation of prostaglandin biosynthetic process","type":"exact"},{"name":"down-regulation of prostaglandin biosynthetic process","type":"exact"},{"name":"downregulation of prostaglandin biosynthetic process","type":"exact"},{"name":"inhibition of prostaglandin biosynthetic process","type":"narrow"},{"name":"negative regulation of prostaglandin anabolism","type":"exact"},{"name":"negative regulation of prostaglandin biosynthesis","type":"exact"},{"name":"negative regulation of prostaglandin formation","type":"exact"},{"name":"negative regulation of prostaglandin synthesis","type":"exact"}],"termid":"GO:0031393"}


id: GO:0071482
data:
  {"annotated_genes":["SJAG_02199","SJAG_01262","SJAG_02200","SJAG_04190","SJAG_02334","SJAG_02818","SJAG_02828","SJAG_00863","SJAG_00208","SJAG_02860","SJAG_05242","SJAG_04150","SJAG_00814","SJAG_05197","SJAG_00729","SJAG_04877","SJAG_00272","SJAG_03898","SJAG_01010","SJAG_01648","SJAG_02182"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009785"},{"annotations":[121643,121642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071483"},{"annotations":[111079,78653,97139,104761],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904161"},{"annotations":[60750,89869,69013,77439,97920,66914,67868,70512,99034,107896,114822,66022,95543,71793,106164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070914"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light stimulus","termid":"GO:0009416"},{"relation_name":"is_a","term_name":"cellular response to radiation","termid":"GO:0071478"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02200":null,"SJAG_02334":null,"SJAG_02818":null,"SJAG_02828":null,"SJAG_02860":null,"SJAG_03898":null,"SJAG_04150":null,"SJAG_04190":null,"SJAG_04877":null,"SJAG_05197":null,"SJAG_05242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to light stimulus","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null,"PMID:23873862":null},"termid":"GO:0071482","terms_by_termid":{"GO:0009785":null,"GO:0070914":null,"GO:0071483":null,"GO:1904161":null}}


id: PBO:0054907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2321","termid":"PBO:0054907"}


id: PBO:0090114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate phosphatase Inp53","termid":"PBO:0090114"}


id: GO:0008792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine + H+ = agmatine + CO2.","definition_xrefs":["EC:4.1.1.19","RHEA:17641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"arginine decarboxylase activity","secondary_identifiers":["Reactome:R-HSA-350598","MetaCyc:ARGDECARBOX-RXN","KEGG_REACTION:R00566"],"synonyms":[{"name":"L-arginine carboxy-lyase (agmatine-forming)","type":"related"},{"name":"L-arginine carboxy-lyase activity","type":"related"},{"name":"SpeA","type":"related"}],"termid":"GO:0008792"}


id: PR:O74482
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- coq11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1840.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.09","synonyms":[{"name":"Spom972h-coq11","type":"exact"}],"termid":"PR:O74482"}


id: MONDO:0007817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Immediate hypersensitivity reaction - type I reaction, involves immunoglobulin E (IgE)-mediated release of chemical mediators from mast cells and basophils. Th2 cells produce IL-4 and IL-13, which then act on B cells to promote the production of antigen-specific IgE. Reexposure to the antigen can then result in the antigen binding to and cross-linking the bound IgE antibodies on the mast cells and basophils. This causes the release of preformed mediators (histamine, tryptase, tryptase, chemotactic factors), newly synthesized mediators (leukotrienes, prostaglandin, thromboxane, platelet-activating factor, adenosine, bradykinin), and cytokines from these cells that results in structural and functional changes to the affected tissue.","definition_xrefs":["NCIT:C3116"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"atopic eczema","termid":"MONDO:0004980"},{"relation_name":"is_a","term_name":"hypersensitivity reaction disease","termid":"MONDO:0000605"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"IgE responsiveness, atopic","secondary_identifiers":["UMLS:C1840253","MESH:C564133","MEDGEN:327063","OMIM:147050"],"synonyms":[{"name":"Atopic hypersensitivity","type":"related"},{"name":"IGER","type":"related"},{"name":"IgE response underlying allergic asthma and rhinitis","type":"related"},{"name":"IgE responsiveness, ATOPIC","type":"related"},{"name":"IgE responsiveness, atopic","type":"exact"},{"name":"IgE, elevated level of","type":"exact"},{"name":"IgE, level of","type":"related"},{"name":"Immunoglobulin E, basic level of, in serum","type":"related"},{"name":"atopy, susceptibility to","type":"related"},{"name":"immediate hypersensitivity","type":"exact"},{"name":"type 1 hypersensitivity","type":"exact"},{"name":"type 1 hypersensitivity reaction","type":"exact"},{"name":"type I hypersensitivity","type":"exact"},{"name":"type I hypersensitivity reaction","type":"exact"},{"name":"type I immediate hypersensitivity reaction","type":"exact"}],"termid":"MONDO:0007817","xrefs":{"Monarch":{"xref_id":"0007817"}}}


id: MONDO:0021518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the hard palate.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palatal neoplasm","termid":"MONDO:0005286"},{"relation_name":"is_a","term_name":"benign neoplasm of oral cavity","termid":"MONDO:0021445"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of hard palate","secondary_identifiers":["MEDGEN:138020","NCIT:C4403","SCTID:92129006","ICD9:210.4","UMLS:C0345552"],"synonyms":[{"name":"benign hard palate neoplasm","type":"exact"},{"name":"benign hard palate tumor","type":"exact"},{"name":"benign hard palate tumour","type":"exact"},{"name":"benign neoplasm of the hard palate","type":"exact"},{"name":"benign tumor of hard palate","type":"exact"},{"name":"benign tumor of the hard palate","type":"exact"},{"name":"benign tumour of hard palate","type":"exact"},{"name":"benign tumour of the hard palate","type":"exact"},{"name":"hard palate benign neoplasm","type":"exact"}],"termid":"MONDO:0021518","xrefs":{"Monarch":{"xref_id":"0021518"}}}


id: GO:0045639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myeloid cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of myeloid cell differentiation","termid":"GO:0045637"},{"relation_name":"positively_regulates","term_name":"myeloid cell differentiation","termid":"GO:0030099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid cell differentiation","synonyms":[{"name":"activation of myeloid cell differentiation","type":"narrow"},{"name":"stimulation of myeloid cell differentiation","type":"narrow"},{"name":"up regulation of myeloid cell differentiation","type":"exact"},{"name":"up-regulation of myeloid cell differentiation","type":"exact"},{"name":"upregulation of myeloid cell differentiation","type":"exact"}],"termid":"GO:0045639"}


id: PBO:0024813
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causal_agent_in","termid":"PBO:0024813"}


id: PBO:0027134
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_telomere-nuclear_envelope_distance_during_mitotic_G2_phase","termid":"PBO:0027134"}


id: GO:0018417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 3Fe-2S cluster by tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide.","definition_xrefs":["RESID:AA0293"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide (obsolete GO:0018417)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl L-cysteine persulphido L-glutamato L-histidino L-serinyl nickel triiron disulphide trioxide","type":"exact"}],"termid":"GO:0018417"}


id: PBO:0086134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for maturation of mitochondrial [4Fe-4S] proteins; functions in a complex with Isa2p and possibly Iba57p; isa1 deletion causes loss of mitochondrial DNA and respiratory deficiency; depletion reduces growth on nonfermentable carbon sources; functional ortholog of bacterial A-type ISC proteins; human ISCA1 can complement isa1 null mutant","termid":"PBO:0086134"}


id: SO:0000911
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a feature that is predicted by a computer program that did not rely on sequence similarity.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"predicted","termid":"SO:0000732"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predicted_by_ab_initio_computation","synonyms":[{"name":"predicted by ab initio computation","type":"exact"}],"termid":"SO:0000911"}


id: PBO:0000155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1445 family protein","termid":"PBO:0000155"}


id: GO:0061386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The closure of the temporary ventral gap in the optic cup that contributes to its shaping.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelial sheet","termid":"GO:0002011"},{"relation_name":"part_of","term_name":"optic cup morphogenesis involved in camera-type eye development","termid":"GO:0002072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"closure of optic fissure","synonyms":[{"name":"closure or choriod fissure","type":"related"}],"termid":"GO:0061386"}


id: MONDO:0010916
data:
  {"annotated_genes":["SJAG_03280"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87286],"is_not":false,"summary":null,"term":"MONDO:0010916"}]},"cv_name":"mondo","definition":"Any autosomal dominant polycystic kidney disease in which the cause of the disease is a mutation in the GANAB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant polycystic kidney disease","termid":"MONDO:0004691"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005240"],"is_obsolete":false,"name":"polycystic kidney disease 3 with or without polycystic liver disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110860","OMIM:600666","UMLS:C3887964","MEDGEN:854672","GARD:18598"],"synonyms":[{"name":"APKD3","type":"exact"},{"name":"Apkd3","type":"exact"},{"name":"GANAB autosomal dominant polycystic kidney disease","type":"exact"},{"name":"PKD3","type":"exact"},{"name":"Pkd3","type":"exact"},{"name":"autosomal dominant polycystic kidney disease caused by mutation in GANAB","type":"exact"},{"name":"polycystic kidney disease 3","type":"exact"},{"name":"polycystic kidney disease 3 with or without polycystic liver disease","type":"exact"},{"name":"polycystic kidney disease 3, autosomal dominant","type":"exact"},{"name":"polycystic kidney disease type 3","type":"exact"},{"name":"polycystic kidney disease, adult, type 3","type":"exact"},{"name":"polycystic kidney disease, adult, type III","type":"exact"},{"name":"polycystic kidney disease, type 3","type":"exact"}],"termid":"MONDO:0010916","terms_by_termid":{"MONDO:0010916":null},"xrefs":{"Monarch":{"xref_id":"0010916"}}}


id: PBO:0090851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex WD repeat protein Elp2","termid":"PBO:0090851"}


id: PR:G2TRN7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC212.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRN7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ DNA helicase-like protein C212.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC212.06c","synonyms":[{"name":"Spom972h-SPAC212.06c","type":"exact"}],"termid":"PR:G2TRN7"}


id: PBO:0047247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 238 member A","termid":"PBO:0047247"}


id: MONDO:1012688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease that occurs in pigs due to a mutation in the HEXA gene.","definition_xrefs":["OMIA:001461-9823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, pig","termid":"MONDO:1010842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2 gangliosidosis, HEXA-related, pig","synonyms":[{"name":"gangliosidosis, GM2, type I (B variant), pig","type":"related"}],"termid":"MONDO:1012688","xrefs":{"Monarch":{"xref_id":"1012688"}}}


id: MONDO:1010820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly, non-human animal","termid":"MONDO:1010158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, goat","secondary_identifiers":["OMIA:000810-9925"],"termid":"MONDO:1010820","xrefs":{"Monarch":{"xref_id":"1010820"}}}


id: MOD:01406
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-threonine residue to form L-threonine thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:11320328","RESID:AA0483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-threonine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S,2R)-1-amino-2-hydroxypropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-hydroxypropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Thr-Cys)","type":"exact"},{"name":"L-threonine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01406"}


id: GO:1902764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of embryonic skeletal joint development.","definition_xrefs":["GO_REF:0000058","GOC:mr","GOC:TermGenie","PMID:16575901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of embryonic skeletal joint development","termid":"GO:1902762"},{"relation_name":"positively_regulates","term_name":"embryonic skeletal joint development","termid":"GO:0072498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of embryonic skeletal joint development","synonyms":[{"name":"activation of embryonic skeletal joint development","type":"narrow"},{"name":"up regulation of embryonic skeletal joint development","type":"exact"},{"name":"up-regulation of embryonic skeletal joint development","type":"exact"},{"name":"upregulation of embryonic skeletal joint development","type":"exact"}],"termid":"GO:1902764"}


id: FYPO:0007755
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the spindle is shorter than normal during metaphase of meiosis I.","definition_xrefs":["PMID:32723864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short meiotic spindle","termid":"FYPO:0000735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000120","FYPO:0000054","FYPO:0001985","FYPO:0002399","FYPO:0000002"],"is_obsolete":false,"name":"short meiotic spindle during metaphase I","synonyms":[{"name":"short meiosis I spindle during metaphase","type":"exact"},{"name":"short spindle during meiotic metaphase I","type":"exact"},{"name":"short spindle during metaphase of meiosis I","type":"exact"}],"termid":"FYPO:0007755"}


id: GO:0019410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The metabolic process in which carbon monoxide (CO) is oxidized to carbon dioxide (CO2) to generate energy. Conservation of energy in this process likely uses sodium ion gradients for ATP synthesis and is coupled to quantitative sulfide methylation.","definition_xrefs":["PMID:18024677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"aerobic respiration, using carbon monoxide as electron donor","termid":"GO:0019410"}


id: GO:0097721
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A Golgi-derived vesicle to which the ciliary basal body docks via its transitional fibers. Its membrane is compositionally distinct from Golgi membranes, and will become the ciliary membrane once the ciliary vesicle is fused to the plasma membrane. The ciliary vesicle is thought to be formed by multiple smaller vesicles that attach to the transitional fibers and then fuse to form a larger vesicle.","definition_xrefs":["PMID:13978319","GOC:cilia","PMID:25686250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"ciliary vesicle","synonyms":[{"name":"CV","type":"related"},{"name":"primary ciliary vesicle","type":"exact"}],"termid":"GO:0097721"}


id: FYPO:0006118
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 5-fluoroorotic acid (5-FOA). Cells stop growing (and may die) at a concentration of 5-FOA that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to 5-fluoroorotic acid","synonyms":[{"name":"hypersensitive to 5-fluoroorotic acid","type":"exact"},{"name":"sensitive to 5-FOA","type":"exact"},{"name":"sensitive to 5-fluoroorotic acid during mitotic cell cycle","type":"related"},{"name":"sensitive to 5-fluoroorotic acid during vegetative growth","type":"exact"}],"termid":"FYPO:0006118"}


id: GO:0044523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, damaging the extracellular matrix of a cell.","definition_xrefs":["PMID:33460638","GOC:fj","GOC:jl","PMID:20398688","PMID:21150580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated disruption of anatomical structure in another organism","termid":"GO:0140138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated disruption of extracellular matrix in another organism","synonyms":[{"name":"envenomation resulting in damage of muscle extracellular matrix causing muscle necrosis in other organism","type":"narrow"},{"name":"envenomation resulting in damage of muscle extracellular matrix in another organism","type":"narrow"},{"name":"envenomation resulting in damage of muscle extracellular matrix in other organism","type":"narrow"}],"termid":"GO:0044523"}


id: FYPO:0004590
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which localization of the gamma-tubulin complex to the spindle pole body takes place abnormally after the cell has undergone a normal mitotic nuclear division and passed through the subsequent mitotic interphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body","termid":"FYPO:0004589"},{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype following normal mitosis","termid":"FYPO:0004593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body following normal mitosis","synonyms":[{"name":"abnormal gamma-tubulin complex localisation to mitotic spindle pole body following normal mitosis","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic SPB following normal mitosis","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body following normal mitosis and interphase","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body following normal mitosis and passage through mitotic G1 phase","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body following normal mitosis during vegetative growth","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body nuclear division following normal mitotic nuclear division","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to spindle pole body following normal nuclear division during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004590"}


id: SO:0000359
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing sequence that is flanked by Lox-P sites.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flanked","termid":"SO:0000357"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"floxed","secondary_identifiers":["http://en.wikipedia.org/wiki/Floxed"],"termid":"SO:0000359"}


id: PBO:0028991
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_proline_import","termid":"PBO:0028991"}


id: PBO:0004278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-PARP type zinc finger protein","termid":"PBO:0004278"}


id: PBO:0071417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 23","termid":"PBO:0071417"}


id: GO:0030511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of TGF-beta receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta receptor signaling pathway","termid":"GO:0017015"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090100"},{"relation_name":"is_a","term_name":"positive regulation of cellular response to transforming growth factor beta stimulus","termid":"GO:1903846"},{"relation_name":"positively_regulates","term_name":"transforming growth factor beta receptor signaling pathway","termid":"GO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transforming growth factor beta receptor signaling pathway","synonyms":[{"name":"activation of transforming growth factor beta receptor signaling pathway","type":"narrow"},{"name":"positive regulation of TGF-beta receptor signaling pathway","type":"exact"},{"name":"positive regulation of TGFbeta receptor signaling pathway","type":"exact"},{"name":"positive regulation of transforming growth factor beta receptor signalling pathway","type":"exact"},{"name":"stimulation of transforming growth factor beta receptor signaling pathway","type":"narrow"},{"name":"up regulation of transforming growth factor beta receptor signaling pathway","type":"exact"},{"name":"up-regulation of transforming growth factor beta receptor signaling pathway","type":"exact"},{"name":"upregulation of transforming growth factor beta receptor signaling pathway","type":"exact"}],"termid":"GO:0030511"}


id: PBO:0086882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcription factor containing a C2H2 zinc finger; mutation affects transcriptional regulation of genes involved in growth on non-fermentable carbon sources, response to salt stress and cell wall biosynthesis; USV1 has a paralog, RGM1, that arose from the whole genome duplication","termid":"PBO:0086882"}


id: GO:1990623
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The dilated terminal portions of neurosecretory axons constituting the hypothalamohypophyseal tract, found in close proximity to sinusoidal capillaries in the posterior pituitary. Herring bodies consist of aggregates of membrane-bound neurosecretory vesicles where oxytocin or antidiuretic hormone (ADH) are stored prior to release. Each Herring body also contains ATP and either neurophysin I or neurophysin II which bind to oxytocin and ADH, respectively.","definition_xrefs":["ISBN:0199652473","Wikipedia:Herring_bodies"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon terminus","termid":"GO:0043679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Herring body","synonyms":[{"name":"neurosecretory body","type":"exact"}],"termid":"GO:1990623"}


id: MONDO:0010865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pseudoaminopterin syndrome is a developmental anomalies syndrome that resembles the aminopterin embryopathy without history of fetal exposure to aminopterin. It is characterized by skull (craniosynostosis and poorly mineralized cranial vault), dysmorphic (ocular hypertelorism, palpebral fissure anomalies, micrognathia cleft lip and/or high arched palate and small and low set/rotated ears) and limb (brachydactyly, syndactyly and clinodactyly) anomalies, associated with mild-to-moderate intellectual deficit and short stature.","definition_xrefs":["Orphanet:221120"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"pseudoaminopterin syndrome","secondary_identifiers":["icd11.foundation:893045173","OMIM:600325","SCTID:715867000","MESH:C535823","UMLS:C0795939","MEDGEN:163196","GARD:4544","ICD10CM:Q82.0"],"synonyms":[{"name":"ASSA","type":"exact"},{"name":"aminopterin syndrome sine aminopterin","type":"related"},{"name":"aminopterin syndrome-like sine aminopterin","type":"exact"},{"name":"pseudoaminopterin syndrome","type":"exact"}],"termid":"MONDO:0010865","xrefs":{"Monarch":{"xref_id":"0010865"}}}


id: PBO:0043633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit epsilon","termid":"PBO:0043633"}


id: FYPO:0002460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, branched, septated, elongated, and is curved along the long axis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable curved elongated vegetative cell","termid":"FYPO:0002215"},{"relation_name":"is_a","term_name":"viable branched, elongated vegetative cell","termid":"FYPO:0002459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"viable branched, curved, elongated vegetative cell","secondary_identifiers":["FYPO:0002477"],"synonyms":[{"name":"viable branched curved cell","type":"exact"},{"name":"viable branched, curved cell during vegetative growth","type":"exact"},{"name":"viable branched, curved septated cell","type":"exact"},{"name":"viable branched, curved vegetative cell","type":"exact"},{"name":"viable branched, curved vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable branched, curved, elongated cell during vegetative growth","type":"exact"},{"name":"viable branched, curved, elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable branched, elongated, curved septated cell","type":"exact"},{"name":"viable branched, long, curved, septated cell","type":"exact"},{"name":"viable curved branched cell","type":"exact"},{"name":"viable elongated branched curved cell","type":"exact"}],"termid":"FYPO:0002460"}


id: PBO:0003981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR7 ortholog","termid":"PBO:0003981"}


id: MONDO:0100141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A COVID-19 infection where individuals who have evidence of lower respiratory disease by clinical assessment or imaging and a saturation of oxygen (SpO2) >93% on room air at sea level.","gene_count":0,"genotype_count":0,"name":"obsolete moderate COVID-19 infection (obsolete MONDO:0100141)","termid":"MONDO:0100141","xrefs":{"Monarch":{"xref_id":"0100141"}}}


id: PBO:0079417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 11","termid":"PBO:0079417"}


id: PBO:0017996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane amno acid transmembrane transporter Fnx2","termid":"PBO:0017996"}


id: MONDO:0044766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Marfan Syndrome 3 (obsolete MONDO:0044766)","secondary_identifiers":["GTR:AN0100577","GTR:AN0100578"],"synonyms":[{"name":"MFS 3","type":"related"},{"name":"Marfan syndrome type 3","type":"related"}],"termid":"MONDO:0044766","xrefs":{"Monarch":{"xref_id":"0044766"}}}


id: PBO:0055743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox transcription factor 1 beta","termid":"PBO:0055743"}


id: PBO:0065973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD54 homolog B","termid":"PBO:0065973"}


id: GO:1900049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone exchange.","definition_xrefs":["PMID:20332092","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone exchange (obsolete GO:1900049)","synonyms":[{"name":"regulation of histone chaperone","type":"related"},{"name":"regulation of histone displacement","type":"exact"},{"name":"regulation of histone replacement","type":"exact"}],"termid":"GO:1900049"}


id: PBO:0059684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 50","termid":"PBO:0059684"}


id: PBO:0078722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAG) 2-1","termid":"PBO:0078722"}


id: GO:0050205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carbamoyl phosphate + oxamate = oxalurate + phosphate.","definition_xrefs":["RHEA:22984","EC:2.1.3.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxamate carbamoyltransferase activity","secondary_identifiers":["MetaCyc:OXAMATE-CARBAMOYLTRANSFERASE-RXN","KEGG_REACTION:R02937"],"synonyms":[{"name":"carbamoyl-phosphate:oxamate carbamoyltransferase activity","type":"related"},{"name":"oxamic transcarbamylase activity","type":"related"}],"termid":"GO:0050205"}


id: MONDO:0013905
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive congenital cerebellar ataxia due to MGLUR1 deficiency is a rare, genetic, slowly progressive neurodegenerative disease resulting from MGLUR1 deficiency characterized by global developmental delay (beginning in infancy), mild to severe intellectual deficit with poor or absent speech, moderate to severe stance and gait ataxia, pyramidal signs (e.g. hyperreflexia) and mild dysdiadochokinesia, dysmetria, tremors, and/or dysarthria. Oculomotor signs, such as nystagmus, strabismus, ptosis and hypometric saccades, may also be associated. Brain imaging reveals progressive, generalized, moderate to severe cerebellar atrophy, inferior vermian hypoplasia, and/or constitutionally small brain.","definition_xrefs":["Orphanet:324262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia - pyramidal signs - nystagmus - oculomotor apraxia syndrome","termid":"MONDO:0018189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0004736","MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"autosomal recessive spinocerebellar ataxia 13","secondary_identifiers":["OMIM:614831","UMLS:C3553816","DOID:0080062","GARD:17481","MEDGEN:766730"],"synonyms":[{"name":"GRM1 autosomal recessive cerebellar ataxia - pyramidal signs - nystagmus - oculomotor apraxia syndrome","type":"exact"},{"name":"GRM1 autosomal recessive cerebellar ataxia-pyramidal signs-nystagmus-oculomotor apraxia syndrome","type":"exact"},{"name":"SCAR13","type":"exact"},{"name":"autosomal recessive cerebellar ataxia - pyramidal signs - nystagmus - oculomotor apraxia syndrome caused by mutation in GRM1","type":"exact"},{"name":"autosomal recessive cerebellar ataxia-pyramidal signs-nystagmus-oculomotor apraxia syndrome caused by mutation in GRM1","type":"exact"},{"name":"autosomal recessive congenital cerebellar ataxia due to MGLUR1 deficiency","type":"related"},{"name":"autosomal recessive congenital cerebellar ataxia due to metabotropic glutamate receptor 1 deficiency","type":"exact"},{"name":"autosomal recessive spinocerebellar ataxia 13","type":"exact"},{"name":"autosomal recessive spinocerebellar ataxia type 13","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 13","type":"related"},{"name":"spinocerebellar ataxia, autosomal recessive type 13","type":"exact"}],"termid":"MONDO:0013905","xrefs":{"Monarch":{"xref_id":"0013905"}}}


id: FYPO:0003382
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of acetate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular acetate level","synonyms":[{"name":"increased acetate accumulation","type":"related"},{"name":"increased cellular acetate level during mitotic cell cycle","type":"related"},{"name":"increased cellular acetate level during vegetative growth","type":"exact"}],"termid":"FYPO:0003382"}


id: PR:Q9P4W9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps403 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P4W9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S4-C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.07","synonyms":[{"name":"Spom972h-rps403","type":"exact"}],"termid":"PR:Q9P4W9"}


id: MONDO:0002760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma of the bladder arising from metaplastic epithelium. It represents less than 10% of bladder carcinomas. The exception is the Middle East along the Nile Valley, where it represents the most common form of carcinoma because of the endemic nature of schistosomiasis. Bladder squamous cell carcinoma is often associated with long-standing chronic inflammation of the bladder and usually has a poor prognosis. The diagnosis of squamous cell carcinoma of the bladder should be reserved for those tumors that are predominantly keratin forming.","definition_xrefs":["NCIT:C4031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder carcinoma","termid":"MONDO:0004986"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder squamous cell carcinoma","secondary_identifiers":["DOID:3742","EFO:1000130","SCTID:255111004","UMLS:C0279681","ONCOTREE:BLSC","MEDGEN:124645"],"synonyms":[{"name":"BLSC","type":"related"},{"name":"bladder epidermoid carcinoma","type":"exact"},{"name":"bladder squamous cell cancer","type":"exact"},{"name":"bladder squamous cell carcinoma","type":"exact"},{"name":"epidermoid carcinoma of bladder","type":"exact"},{"name":"epidermoid carcinoma of the bladder","type":"exact"},{"name":"epidermoid carcinoma of the urinary bladder","type":"exact"},{"name":"epidermoid carcinoma of urinary bladder","type":"exact"},{"name":"squamous cell carcinoma of bladder","type":"exact"},{"name":"squamous cell carcinoma of the bladder","type":"exact"},{"name":"squamous cell carcinoma of the urinary bladder","type":"exact"},{"name":"squamous cell carcinoma of urinary bladder","type":"exact"},{"name":"urinary bladder epidermoid carcinoma","type":"exact"},{"name":"urinary bladder squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0002760","xrefs":{"Monarch":{"xref_id":"0002760"}}}


id: GO:0042263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with neuropeptide F and transmitting the signal within the cell to initiate a change in cell activity. Neuropeptide F is an arthropod peptide of more than 28 residues (typically 28-45) with a consensus C-terminal RxRFamide (commonly RPRFa, but also RVRFa.","definition_xrefs":["PMID:21440021","GOC:ma","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"neuropeptide F receptor activity","synonyms":[{"name":"NPF receptor activity","type":"exact"}],"termid":"GO:0042263"}


id: GO:1904956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of midbrain dopaminergic neuron differentiation.","definition_xrefs":["GO_REF:0000058","GOC:bf","PMID:21347250","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dopaminergic neuron differentiation","termid":"GO:1904338"},{"relation_name":"regulates","term_name":"midbrain dopaminergic neuron differentiation","termid":"GO:1904948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of midbrain dopaminergic neuron differentiation","synonyms":[{"name":"regulation of DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"regulation of mDA neuron differentiation","type":"exact"},{"name":"regulation of midbrain DA neurogenesis","type":"exact"},{"name":"regulation of midbrain dopaminergic neuron production","type":"exact"}],"termid":"GO:1904956"}


id: GO:2000012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of auxin polar transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone levels","termid":"GO:0010817"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"auxin polar transport","termid":"GO:0009926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of auxin polar transport","termid":"GO:2000012"}


id: FYPO:0007759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids lasts longer than normal in centromeric regions, continuing into anaphase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:33888556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid cohesion","termid":"FYPO:0002092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of meiotic sister chromatid cohesion at centromere during meiosis I","synonyms":[{"name":"ectopic meiotic sister chromatid cohesion at centromere during meiosis I","type":"related"},{"name":"increased duration of meiotic sister chromatid cohesion at centromere during anaphase I","type":"exact"},{"name":"increased duration of meiotic sister chromatid cohesion at centromere during anaphase of meiosis I","type":"narrow"},{"name":"increased duration of meiotic sister chromatid cohesion at centromere during first meiotic nuclear division","type":"exact"},{"name":"increased duration of meiotic sister chromatid cohesion, centromeric, during meiosis I","type":"exact"},{"name":"increased duration of sister chromatid cohesion at centromere during meiosis I","type":"exact"},{"name":"prolonged meiotic sister chromatid cohesion at centromere during meiosis I","type":"exact"}],"termid":"FYPO:0007759"}


id: PBO:0065692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine 5'-phosphatase pseudogene 1","termid":"PBO:0065692"}


id: GO:0045628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper 2 cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type 2 immune response","termid":"GO:0002828"},{"relation_name":"is_a","term_name":"regulation of T-helper cell differentiation","termid":"GO:0045622"},{"relation_name":"regulates","term_name":"T-helper 2 cell differentiation","termid":"GO:0045064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 2 cell differentiation","synonyms":[{"name":"regulation of T-helper 2 cell development","type":"related"}],"termid":"GO:0045628"}


id: GO:0140381
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 S-adenosyl-L-methionine (SAM) + 4-hydroxytryptamine 4-phosphate (norbaeocystin) = 2 S-adenosyl-L-homocysteine + psilocybin.","definition_xrefs":["PMID:28763571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"4-hydroxytryptamine 4-phosphate methyltransferase activity","secondary_identifiers":["EC:2.1.1.345","RHEA:55568"],"synonyms":[{"name":"norbaeocystin methyltransferase","type":"exact"},{"name":"psilocybin synthase","type":"exact"}],"termid":"GO:0140381"}


id: GO:1902537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A pinocytosis which involves another organism.","definition_xrefs":["GOC:bf","GOC:jl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism pinocytosis (obsolete GO:1902537)","termid":"GO:1902537"}


id: PR:O14459
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit RPB7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12709:SF1","PRO:DNx","OMA:SCHPO01221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II subunit rpb7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.06c","secondary_identifiers":["UniProtKB:O14459"],"synonyms":[{"name":"RNA polymerase II subunit B7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR2G","type":"exact"}],"termid":"PR:O14459"}


id: PBO:0046082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 7","termid":"PBO:0046082"}


id: PBO:0058198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4491","termid":"PBO:0058198"}


id: PBO:0071536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene","termid":"PBO:0071536"}


id: PBO:0074884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 62B","termid":"PBO:0074884"}


id: PBO:0088897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall glycoside hydrolase, family 5","termid":"PBO:0088897"}


id: PBO:0050038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 6 (pseudogene)","termid":"PBO:0050038"}


id: MONDO:1012390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sensory ataxic neuropathy, non-human animal","termid":"MONDO:1011878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensory ataxic neuropathy, dog","secondary_identifiers":["OMIA:001467-9615"],"termid":"MONDO:1012390","xrefs":{"Monarch":{"xref_id":"1012390"}}}


id: GO:0140923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a magnetosome. Magnetosomes are specialized organelles for magnetic navigation that comprise membrane-enveloped, nano-sized crystals of a magnetic iron mineral; they are formed by a diverse group of magnetotactic bacteria (MTB).","definition_xrefs":["PMID:19575557","PMID:34723168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"magnetosome assembly","synonyms":[{"name":"magnetosome formation","type":"exact"}],"termid":"GO:0140923"}


id: GO:0002650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of tolerance induction to self antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tolerance induction","termid":"GO:0002644"},{"relation_name":"is_a","term_name":"regulation of tolerance induction to self antigen","termid":"GO:0002649"},{"relation_name":"negatively_regulates","term_name":"tolerance induction to self antigen","termid":"GO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tolerance induction to self antigen","synonyms":[{"name":"down regulation of tolerance induction to self antigen","type":"exact"},{"name":"down-regulation of tolerance induction to self antigen","type":"exact"},{"name":"downregulation of tolerance induction to self antigen","type":"exact"},{"name":"inhibition of tolerance induction to self antigen","type":"narrow"}],"termid":"GO:0002650"}


id: PBO:0090207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIC complex subunit Sfc9","termid":"PBO:0090207"}


id: FYPO:0000644
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 a.a.)","uniquename":"SJAG_01143:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121429],"is_not":false,"summary":null,"term":"FYPO:0000644"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cellular protein localization is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01143":null},"genotype_count":1,"genotypes_by_uniquename":{"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"mid1-delta(711-723 a.a.)(aa)","display_uniquename":"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization during vegetative growth","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_01143"],"single_locus_genotype_uniquenames":["mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"normal cellular protein localization during vegetative growth","type":"exact"},{"name":"normal protein localisation during vegetative growth","type":"exact"},{"name":"normal protein localization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000644","terms_by_termid":{"FYECO:0000137":null,"FYPO:0000644":null}}


id: PBO:0073193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein W","termid":"PBO:0073193"}


id: GO:1903958
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of nitric-oxide synthase activity.","definition_xrefs":["GOC:bhm","GO_REF:0000088","PMID:25417112","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nitric-oxide synthase complex","synonyms":[{"name":"iNOS-S100A8/A9 complex","type":"narrow"}],"termid":"GO:1903958"}


id: MONDO:0013851
data:
  {"annotated_genes":["SJAG_01840"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88137],"is_not":false,"summary":null,"term":"MONDO:0013851"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bone marrow failure syndrome","termid":"MONDO:0000159"},{"relation_name":"is_a","term_name":"inherited aplastic anemia","termid":"MONDO:0001713"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01840":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"autosomal dominant aplasia and myelodysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:814883","OMIM:614675","Orphanet:314399","GARD:17420","NANDO:1200301","UMLS:C3808553"],"synonyms":[{"name":"BMFS1","type":"related"},{"name":"autosomal dominant aplastic anaemia and myelodysplasia","type":"exact"},{"name":"autosomal dominant aplastic anemia and myelodysplasia","type":"exact"},{"name":"bone marrow failure syndrome 1","type":"related"},{"name":"bone marrow failure syndrome type 1","type":"exact"}],"termid":"MONDO:0013851","terms_by_termid":{"MONDO:0013851":null},"xrefs":{"Monarch":{"xref_id":"0013851"}}}


id: FYPO:0006642
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"},{"relation_name":"is_a","term_name":"abnormal protein localization to nuclear periphery","termid":"FYPO:0002338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to nucleus during mitotic interphase","synonyms":[{"name":"decreased protein localisation to nucleus during mitotic interphase","type":"exact"},{"name":"decreased protein localization to nucleus during interphase during vegetative growth","type":"exact"},{"name":"decreased protein localization to nucleus during interphase of mitotic cell cycle","type":"exact"},{"name":"reduced protein localization to nucleus during mitotic interphase","type":"exact"}],"termid":"FYPO:0006642"}


id: MONDO:0017465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pseudoarthrosis of the limbs","termid":"MONDO:0015525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital pseudoarthrosis of the radius","secondary_identifiers":["GARD:21206","UMLS:C5679936","Orphanet:295024","MEDGEN:1842721"],"synonyms":[{"name":"congenital pseudarthrosis of the radius","type":"exact"}],"termid":"MONDO:0017465","xrefs":{"Monarch":{"xref_id":"0017465"}}}


id: GO:0052185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in an anatomical part or cellular component of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification of structure of other organism involved in symbiotic interaction (obsolete GO:0052185)","synonyms":[{"name":"modification of structure of other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052185"}


id: GO:0098710
data:
  {"annotated_genes":["SJAG_03777"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114537],"is_not":false,"summary":null,"term":"GO:0098710"}]},"cv_name":"biological_process","definition":"The directed movement of guanine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"guanine transmembrane transport","termid":"GO:1903716"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03777":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"guanine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0061489"],"synonyms":[{"name":"guanine import into cell","type":"exact"}],"termid":"GO:0098710","terms_by_termid":{"GO:0098710":null}}


id: GO:0070548
data:
  {"annotated_genes":["SJAG_04728"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004360"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an amino group from L-glutamine to an acceptor, usually a 2-oxo acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04728":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016769","GO:0003824"],"is_obsolete":false,"name":"L-glutamine aminotransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0070548","terms_by_termid":{"GO:0004360":null}}


id: PATO:0002316
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Being separate or discrete from other skeletal elements.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autogenous","synonyms":[{"name":"free","type":"related"}],"termid":"PATO:0002316"}


id: PBO:0086984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of type 1 protein phosphatase Glc7p; involved in negative regulation of glucose-repressible genes; involved in regulation of the nucleocytoplasmic shuttling of Hxk2p; REG1 has a paralog, REG2, that arose from the whole genome duplication","termid":"PBO:0086984"}


id: MONDO:0003191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An exceptionally rare adenocarcinoma that arises from the rete ovarii.","definition_xrefs":["NCIT:C40017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian adenocarcinoma","termid":"MONDO:0002752"},{"relation_name":"is_a","term_name":"rete ovarii neoplasm","termid":"MONDO:0003192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"rete ovarii adenocarcinoma","secondary_identifiers":["DOID:4894","MEDGEN:826068","UMLS:C3840223"],"synonyms":[{"name":"rete ovarii adenocarcinoma","type":"exact"}],"termid":"MONDO:0003191","xrefs":{"Monarch":{"xref_id":"0003191"}}}


id: GO:0008044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Behavior in a fully developed and mature organism, as seen in insects.","definition_xrefs":["GOC:bf","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete adult behavior (sensu Insecta) (obsolete GO:0008044)","synonyms":[{"name":"adult behavior (sensu Insecta)","type":"exact"}],"termid":"GO:0008044"}


id: PBO:0088230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldose reductase ARK13 family YakC, implicated in cellular detoxification from family members","termid":"PBO:0088230"}


id: GO:0032545
data:
  {"annotated_genes":["SJAG_03617","SJAG_03156"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76356,80344],"is_not":false,"summary":null,"term":"GO:0032545"}]},"cv_name":"cellular_component","definition":"A protein complex that is involved in the transcription of ribosomal genes. In Saccharomyces this complex consists of Ckb2p, Utp22p, Rrp7p and Ifh1p.","definition_xrefs":["PMID:17452446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03156":null,"SJAG_03617":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"CURI complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0032545","terms_by_termid":{"GO:0032545":null}}


id: PBO:0049611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 14","termid":"PBO:0049611"}


id: PBO:0089469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication ATPase Mgs1","termid":"PBO:0089469"}


id: GO:1904527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of microtubule binding.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","GOC:als","PMID:24520051"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of microtubule binding (obsolete GO:1904527)","synonyms":[{"name":"down regulation of microtubule binding","type":"exact"},{"name":"down regulation of microtubule severing activity","type":"related"},{"name":"down regulation of microtubule/chromatin interaction","type":"related"},{"name":"down-regulation of microtubule binding","type":"exact"},{"name":"down-regulation of microtubule severing activity","type":"related"},{"name":"down-regulation of microtubule/chromatin interaction","type":"related"},{"name":"downregulation of microtubule binding","type":"exact"},{"name":"downregulation of microtubule severing activity","type":"related"},{"name":"downregulation of microtubule/chromatin interaction","type":"related"},{"name":"inhibition of microtubule binding","type":"narrow"},{"name":"inhibition of microtubule severing activity","type":"related"},{"name":"inhibition of microtubule/chromatin interaction","type":"related"},{"name":"negative regulation of microtubule severing activity","type":"related"},{"name":"negative regulation of microtubule/chromatin interaction","type":"related"}],"termid":"GO:1904527"}


id: MONDO:0019191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"IgG4-related dacryoadenitis and sialoadenitis (Mikulicz disease) is an IgG4-related sclerosing disease characterized by persistent, usually painless, bilateral enlargement of the lacrimal, parotid, and submandibular glands associated with elevated levels of serum immunoglobulin (Ig) G4 and with lymphocyte and IgG4-positive plasmacyte infiltration. It predominantly causes mouth and eye dryness but can also affect other organs such as the lungs, liver, and kidneys, and be accompanied by complications such as autoimmune pancreatitis (AIP), retroperitoneal fibrosis, and tubulointerstitial nephritis.","definition_xrefs":["Orphanet:79078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease of ear, nose and throat","termid":"MONDO:0000587"},{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"},{"relation_name":"is_a","term_name":"IgG4-related ophthalmic disorder","termid":"MONDO:0018675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005046"],"is_obsolete":false,"name":"IgG4-related dacryoadenitis and sialadenitis","secondary_identifiers":["MEDGEN:6399","NCIT:C34819","SCTID:7826003","DOID:12900","MESH:D008882","icd11.foundation:796087277","UMLS:C0026103","GARD:7043","MedDRA:10051457","NANDO:1200929","MedDRA:10052317"],"synonyms":[{"name":"Mikulicz disease","type":"exact"},{"name":"Mikulicz disease (former)","type":"related"},{"name":"Mikulicz syndrome (former)","type":"related"},{"name":"Mikulicz's disease","type":"exact"},{"name":"Mikulicz's disease (former)","type":"related"},{"name":"chronic dacryoadenitis and sialadenitis","type":"exact"}],"termid":"MONDO:0019191","xrefs":{"Monarch":{"xref_id":"0019191"}}}


id: PBO:0044936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyguanosine kinase","termid":"PBO:0044936"}


id: MONDO:0033967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immune dysregulation with inflammatory bowel disease (obsolete MONDO:0033967)","secondary_identifiers":["Orphanet:529974"],"termid":"MONDO:0033967","xrefs":{"Monarch":{"xref_id":"0033967"}}}


id: GO:0018684
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1R,4R)-bornane-2,5-dione + FMNH2 + O2 = (1R,4R)-5-oxo-1,2-campholide + FMN + H+ + H2O.","definition_xrefs":["PMID:8515237","PMID:3944058","RHEA:34415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2,5-diketocamphane 1,2-monooxygenase","secondary_identifiers":["EC:1.14.14.108","MetaCyc:R543-RXN","UM-BBD_enzymeID:r0428"],"synonyms":[{"name":"(+)-camphor,reduced-rubredoxin:oxygen oxidoreductase (1,2-lactonizing)","type":"related"},{"name":"2,5-diketocamphane lactonizing enzyme activity","type":"related"},{"name":"camphor 1,2-monooxygenase activity","type":"exact"},{"name":"camphor ketolactonase I activity","type":"related"}],"termid":"GO:0018684"}


id: MONDO:0015702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"T-B+ severe combined immunodeficiency","termid":"MONDO:0044200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"T-B+ severe combined immunodeficiency due to CD45 deficiency","secondary_identifiers":["DOID:0060014","GARD:17052","MEDGEN:1842877","UMLS:C5679579","Orphanet:169157"],"synonyms":[{"name":"CD45 deficiency","type":"exact"},{"name":"T-B+ SCID due to CD45 deficiency","type":"exact"}],"termid":"MONDO:0015702","xrefs":{"Monarch":{"xref_id":"0015702"}}}


id: GO:0018257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-lysine to form peptidyl-N6-formyl-L-lysine.","definition_xrefs":["RESID:AA0211"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine formylation (obsolete GO:0018257)","termid":"GO:0018257"}


id: FYPO:0006353
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed from the centromere central core are present at greater levels than normal. Normally, the central core is not transcribed.","definition_xrefs":["PMID:23267073","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased centromeric transcript level","termid":"FYPO:0004982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased centromere central core transcript level","synonyms":[{"name":"accumulation of centromere central core-derived RNA transcripts","type":"related"},{"name":"increased centromere central core RNA level","type":"exact"},{"name":"increased centromere central core-derived RNA accumulation","type":"related"},{"name":"increased centromere central core-derived RNA level during mitotic cell cycle","type":"related"},{"name":"increased centromere central core-derived RNA level during vegetative growth","type":"exact"},{"name":"increased centromere central core-derived RNA transcript level","type":"exact"},{"name":"increased centromeric core transcript level","type":"exact"}],"termid":"FYPO:0006353"}


id: MONDO:0010582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete diabetes insipidus, neurohypophyseal type, X-linked inheritance (obsolete MONDO:0010582)","secondary_identifiers":["OMIM:304900","DOID:0081059"],"synonyms":[{"name":"diabetes insipidus, neurohypophyseal type","type":"exact"}],"termid":"MONDO:0010582","xrefs":{"Monarch":{"xref_id":"0010582"}}}


id: GO:0031062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the covalent addition of methyl groups to histones.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone methylation (obsolete GO:0031062)","synonyms":[{"name":"activation of histone methylation","type":"narrow"},{"name":"stimulation of histone methylation","type":"narrow"},{"name":"up regulation of histone methylation","type":"exact"},{"name":"up-regulation of histone methylation","type":"exact"},{"name":"upregulation of histone methylation","type":"exact"}],"termid":"GO:0031062"}


id: FYPO:0006112
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 in silent mating-type cassettes does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0004170"},{"relation_name":"is_a","term_name":"abnormal histone methylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0007373"},{"relation_name":"is_a","term_name":"abolished histone H3-K9 methylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0008212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"abolished histone H3-K9 dimethylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 dimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K9me2 at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 dimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"abolished silent mating-type cassette histone H3-K9 dimethylation during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation abolished at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation absent at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0006112"}


id: GO:0048315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of producing non-motile spores, called conidia, via mitotic asexual reproduction in higher fungi. Conidia are haploid cells genetically identical to their haploid parent. They are produced by conversion of hyphal elements, or are borne on sporogenous cells on or within specialized structures termed conidiophores, and participate in dispersal of the fungus.","definition_xrefs":["ISBN:0963117211","GOC:di","PMID:2524423","PMID:9529886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation","termid":"GO:0030436"},{"relation_name":"part_of","term_name":"conidium development","termid":"GO:0061794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"conidium formation","synonyms":[{"name":"conidia biosynthesis","type":"related"},{"name":"conidia formation","type":"exact"}],"termid":"GO:0048315"}


id: GO:0048483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the autonomic nervous system over time, from its formation to the mature structure. The autonomic nervous system is composed of neurons that are not under conscious control, and is comprised of two antagonistic components, the sympathetic and parasympathetic nervous systems. The autonomic nervous system regulates key functions including the activity of the cardiac (heart) muscle, smooth muscles (e.g. of the gut), and glands.","definition_xrefs":["FMA:9905","GOC:jid","GOC:sr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"autonomic nervous system development","termid":"GO:0048483"}


id: PBO:0084858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; required for mitochondrial genome integrity, respiratory growth, and mitochondrial redox homeostasis, partially overlaps verified gene YPR099C","termid":"PBO:0084858"}


id: PBO:0057969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689b","termid":"PBO:0057969"}


id: GO:0002731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of dendritic cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte mediated immunity","termid":"GO:0002704"},{"relation_name":"is_a","term_name":"negative regulation of cytokine production involved in immune response","termid":"GO:0002719"},{"relation_name":"is_a","term_name":"regulation of dendritic cell cytokine production","termid":"GO:0002730"},{"relation_name":"negatively_regulates","term_name":"dendritic cell cytokine production","termid":"GO:0002371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of dendritic cell cytokine production","synonyms":[{"name":"down regulation of dendritic cell cytokine production","type":"exact"},{"name":"down-regulation of dendritic cell cytokine production","type":"exact"},{"name":"downregulation of dendritic cell cytokine production","type":"exact"},{"name":"inhibition of dendritic cell cytokine production","type":"narrow"}],"termid":"GO:0002731"}


id: MONDO:0800075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any dysostosis that involves the vertebrae, with or without involvement of the the ribs or the upper sides of the body.","gene_count":0,"genotype_count":0,"name":"obsolete dysostosis with predominant vertebral with and without costal involvement (obsolete MONDO:0800075)","termid":"MONDO:0800075","xrefs":{"Monarch":{"xref_id":"0800075"}}}


id: PBO:0080679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wolf-Hirschhorn syndrome candidate 1-like 2, pseudogene","termid":"PBO:0080679"}


id: PBO:0113105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair methyltransferase (6-O-methylguanine-DNA methylase); involved in protection against DNA alkylation damage; localizes to the peroxisome in a Pex5p-dependent manner","termid":"PBO:0113105"}


id: MONDO:0012943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the IDH3B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"IDH3B-related retinopathy","termid":"MONDO:0800393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 46","secondary_identifiers":["UMLS:C2675496","MEDGEN:382614","DOID:0110409","GARD:15571","ICD10CM:H35.5","MESH:C567249","OMIM:612572"],"synonyms":[{"name":"IDH3B retinitis pigmentosa","type":"exact"},{"name":"RP46","type":"exact"},{"name":"retinitis pigmentosa 46","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in IDH3B","type":"exact"},{"name":"retinitis pigmentosa type 46","type":"exact"},{"name":"retinitis pigmentosa, autosomal recessive, Idh3B-related","type":"related"}],"termid":"MONDO:0012943","xrefs":{"Monarch":{"xref_id":"0012943"}}}


id: MONDO:0008520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly-elbow wrist dysplasia syndrome is a rare, genetic bone development disorder characterized by dysplasia of all the bony components of the elbow joint, abnormally shaped carpal bones, wrist joint radial deviation and brachydactyly. Patients typically present with slight flexion at the elbow joints (with impossibility to perform active extension) and usually associate a limited range of motion of the elbow, wrist and finger articulations. Camptodactyly and syndactyly have also been reported.","definition_xrefs":["Orphanet:1275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone development disease","termid":"MONDO:0005497"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"brachydactyly-elbow wrist dysplasia syndrome","secondary_identifiers":["GARD:966","OMIM:186550","MEDGEN:396103","MESH:C566090","SCTID:764437006","UMLS:C1861313"],"synonyms":[{"name":"LBNBG","type":"related"},{"name":"LIEBENBERG syndrome","type":"related"},{"name":"Liebenberg syndrome","type":"exact"},{"name":"brachydactyly elbow wrist dysplasia","type":"related"},{"name":"brachydactyly with Joint dysplasia","type":"related"},{"name":"brachydactyly with joint dysplasia","type":"related"},{"name":"brachydactyly-joint dysplasia syndrome","type":"exact"},{"name":"carpal synostosis with dysplastic elbow joints and brachydactyly","type":"related"},{"name":"synostosis, carpal, with dysplastic elbow joints and brachydactyly","type":"related"}],"termid":"MONDO:0008520","xrefs":{"Monarch":{"xref_id":"0008520"}}}


id: MONDO:0024905
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diseases of birds not considered poultry, therefore usually found in zoos, parks, and the wild. The concept is differentiated from poultry diseases which is for birds raised as a source of meat or eggs for human consumption, and usually found in barnyards, hatcheries, etc.","definition_xrefs":["MESH:D001715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bird disease","synonyms":[{"name":"Avian disease","type":"related"},{"name":"Avian diseases","type":"related"},{"name":"bird disease","type":"exact"},{"name":"disease, Avian","type":"related"},{"name":"disease, Bird","type":"related"},{"name":"diseases, Avian","type":"related"},{"name":"diseases, Bird","type":"related"}],"termid":"MONDO:0024905","xrefs":{"Monarch":{"xref_id":"0024905"}}}


id: GO:0015006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A copper-containing electron carrier acting between cytochrome b(6)-f and P700 of photosystem I.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete plastocyanin (obsolete GO:0015006)","synonyms":[{"name":"plastocyanin","type":"exact"}],"termid":"GO:0015006"}


id: PBO:0027284
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus_during_cellular_response_to_salt_stress","termid":"PBO:0027284"}


id: PBO:0055886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC8C divergent transcript","termid":"PBO:0055886"}


id: PBO:0068688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 69, pseudogene","termid":"PBO:0068688"}


id: GO:0006427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling histidine to histidyl-tRNA, catalyzed by histidyl-tRNA synthetase. The histidyl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3''-OH group of a histidine-accetping tRNA.","definition_xrefs":["ISBN:0716730510","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"histidyl-tRNA aminoacylation","termid":"GO:0006427"}


id: PBO:0004468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin specific chaperone cofactor D, Alp1","termid":"PBO:0004468"}


id: PBO:0069831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1117, pseudogene","termid":"PBO:0069831"}


id: GO:0052487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the jasmonic acid-mediated defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont jasmonic acid-mediated defense response (obsolete GO:0052487)","synonyms":[{"name":"negative regulation by organism of symbiont jasmonic acid-mediated defense response","type":"exact"},{"name":"suppression by organism of symbiont JA-mediated defense response","type":"exact"}],"termid":"GO:0052487"}


id: PBO:0081017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 48","termid":"PBO:0081017"}


id: FYPO:0007795
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in G1 phase after the cells have undergone two rounds of cell division under nutrient-replete conditions. This arrest resembles that of wild-type cells under conditions of nitrogen starvation.","definition_xrefs":["PomBase:mah","PMID:17121544","PMID:28476936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic G1 phase","termid":"FYPO:0005097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"two cell divisions prior to cell cycle arrest in mitotic G1 phase without nutrient starvation","synonyms":[{"name":"two cell divisions prior to mitotic G1 arrest without nutrient starvation","type":"exact"},{"name":"two cell divisions prior to mitotic cell cycle arrest in G1 phase without nutrient starvation","type":"exact"}],"termid":"FYPO:0007795"}


id: GO:0010601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of auxins, plant hormones that regulate aspects of plant growth.","definition_xrefs":["PMID:18287041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of auxin biosynthetic process","termid":"GO:0010600"},{"relation_name":"is_a","term_name":"positive regulation of hormone biosynthetic process","termid":"GO:0046886"},{"relation_name":"is_a","term_name":"positive regulation of auxin metabolic process","termid":"GO:0090355"},{"relation_name":"positively_regulates","term_name":"auxin biosynthetic process","termid":"GO:0009851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of auxin biosynthetic process","termid":"GO:0010601"}


id: MONDO:0003088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from skeletal muscle.","definition_xrefs":["NCIT:C3699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deep hemangioma","termid":"MONDO:0003096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intramuscular hemangioma","secondary_identifiers":["DOID:468","ICDO:9132/0","MEDGEN:61450","UMLS:C0205789"],"synonyms":[{"name":"intramuscular angioma","type":"exact"},{"name":"intramuscular hemangioma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003088","xrefs":{"Monarch":{"xref_id":"0003088"}}}


id: FYPO:0001331
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00370:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00370","name":"erg1delta","uniquename":"SJAG_00370:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 a.a.)","uniquename":"SJAG_01143:allele-2"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01374:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01374","name":"nup132delta","uniquename":"SJAG_01374:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02252:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02252","name":"ace2delta","uniquename":"SJAG_02252:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03143","name":"sep1delta","uniquename":"SJAG_03143:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03360:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03360","name":"shc1delta","uniquename":"SJAG_03360:allele-1"},"SJAG_03444:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03444","name":"agn1delta","uniquename":"SJAG_03444:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K 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