# terms

id: GO:0062011
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contributes to and regulates mitochondrial respiratory chain complex IV (COX) formation. It acts by regulating mitochondrial COX1 translation and by promoting the assembly of COX components.","definition_xrefs":["PMID:21068384","GOC:lnp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"},{"relation_name":"is_a","term_name":"protein folding chaperone complex","termid":"GO:0101031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0032991","GO:0005739","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"mitochondrial respiratory chain complex IV pre-assembly complex","synonyms":[{"name":"COX pre-assemply complex","type":"broad"},{"name":"COX1 preassemply complex","type":"exact"}],"termid":"GO:0062011"}


id: PATO:0001594
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave quality inhering in a bearer by virtue of the bearer's forming or resembling an arch.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave","termid":"PATO:0001857"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arched","termid":"PATO:0001594"}


id: MONDO:0012216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"},{"relation_name":"is_a","term_name":"hereditary optic neuropathy","termid":"MONDO:0020249"},{"relation_name":"is_a","term_name":"foveal hypoplasia","termid":"MONDO:0044203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0004736"],"is_obsolete":false,"name":"foveal hypoplasia - optic nerve decussation defect - anterior segment dysgenesis syndrome","secondary_identifiers":["MEDGEN:814203","MESH:C563774","OMIM:609218","DOID:0070531","UMLS:C3807873","GARD:17632","Orphanet:397618"],"synonyms":[{"name":"FHONDA syndrome","type":"exact"},{"name":"FVH2","type":"related"},{"name":"foveal hypoplasia - optic nerve decussation defect - anterior segment dysgenesis syndrome","type":"exact"},{"name":"foveal hypoplasia 2","type":"related"},{"name":"foveal hypoplasia 2 with optic nerve decussation defects and anterior segment dysgenesis without albinism","type":"related"},{"name":"foveal hypoplasia 2 with or without optic nerve misrouting and/or anterior segment dysgenesis","type":"related"},{"name":"foveal hypoplasia 2, with or without optic nerve misrouting and/or anterior segment dysgenesis","type":"exact"},{"name":"foveal hypoplasia type 2","type":"exact"}],"termid":"MONDO:0012216","xrefs":{"Monarch":{"xref_id":"0012216"}}}


id: PBO:0060731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 2","termid":"PBO:0060731"}


id: PBO:0066005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ral guanine nucleotide dissociation stimulator","termid":"PBO:0066005"}


id: GO:0120082
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subcompartment of the smooth endoplasmic reticulum consisting of lumenal expansion into a flattened, disc-shaped cavity.","definition_xrefs":["PMID:12112448","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"smooth endoplasmic reticulum","termid":"GO:0005790"},{"relation_name":"part_of","term_name":"endoplasmic reticulum cisternal network","termid":"GO:0071781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005783","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"smooth endoplasmic reticulum cisterna","termid":"GO:0120082"}


id: GO:0004671
data:
  {"annotated_genes":["SJAG_05016"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77201],"is_not":false,"summary":null,"term":"GO:0004671"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + protein C-terminal S-farnesyl-L-cysteine = S-adenosyl-L-homocysteine + protein C-terminal S-farnesyl-L-cysteine methyl ester.","definition_xrefs":["EC:2.1.1.100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein C-terminal carboxyl O-methyltransferase activity","termid":"GO:0003880"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0003674","GO:0003824","GO:0008276","GO:0016741"],"is_obsolete":false,"name":"protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R04496","MetaCyc:2.1.1.100-RXN","GO:0018225","Reactome:R-HSA-6788650","Reactome:R-HSA-9647977","RHEA:21672"],"synonyms":[{"name":"S-adenosyl-L-methionine:protein-C-terminal-S-farnesyl-L-cysteine O-methyltransferase activity","type":"related"},{"name":"S-farnesylcysteine methyltransferase activity","type":"related"},{"name":"farnesyl cysteine C-terminal methyltransferase activity","type":"related"},{"name":"farnesyl-protein carboxymethyltransferase activity","type":"related"},{"name":"farnesylated protein C-terminal O-methyltransferase activity","type":"related"},{"name":"isoprenylated protein methyltransferase activity","type":"related"},{"name":"isoprenylcysteine carboxylmethyltransferase activity","type":"related"},{"name":"prenylated protein carboxyl methyltransferase activity","type":"related"},{"name":"prenylated protein methyltransferase activity","type":"related"},{"name":"prenylcysteine carboxyl methyltransferase activity","type":"related"},{"name":"prenylcysteine carboxylmethyltransferase activity","type":"related"},{"name":"prenylcysteine carboxymethyltransferase activity","type":"related"},{"name":"prenylcysteine methyltransferase activity","type":"related"},{"name":"protein C-terminal farnesylcysteine O-methyltransferase activity","type":"related"},{"name":"protein S-farnesylcysteine C-terminal methyltransferase activity","type":"related"},{"name":"protein-S-isoprenylcysteine O-methyltransferase activity","type":"exact"}],"termid":"GO:0004671","terms_by_termid":{"GO:0004671":null}}


id: FYECO:0000304
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which tert-butyl hydroperoxide was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ TBHP","synonyms":[{"name":"TBH","type":"exact"},{"name":"tert-butyl hydroperoxide","type":"exact"}],"termid":"FYECO:0000304"}


id: PBO:0051291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-12","termid":"PBO:0051291"}


id: PBO:0001265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane translocase Oxa101","termid":"PBO:0001265"}


id: PBO:0084662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial 3-hydroxyacyl-thioester dehydratase; involved in fatty acid biosynthesis, required for respiratory growth and for normal mitochondrial morphology","termid":"PBO:0084662"}


id: GO:0018592
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-nitrocatechol + NAD(P)H + O2 = 2-hydroxy-1,4-benzoquinone + nitrite + NAD(P)+ + H2O.","definition_xrefs":["EC:1.14.13.166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-nitrocatechol 4-monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0231"],"termid":"GO:0018592"}


id: GO:0006363
data:
  {"annotated_genes":["SJAG_02922","SJAG_04106","SJAG_04855","SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98293,104211,116215,117990],"is_not":false,"summary":null,"term":"GO:0006363"}]},"cv_name":"biological_process","definition":"A transcription termination process that completes the production of a ribosomal RNA transcript. RNAP I termination requires binding of a terminator protein to specific sequences downstream of the transcription unit.","definition_xrefs":["GOC:mah","PMID:10684922","PMID:27371117","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription termination","termid":"GO:0006353"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase I","termid":"GO:0006360"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02922":null,"SJAG_03689":null,"SJAG_04106":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"termination of RNA polymerase I transcription","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019223","Reactome:R-HSA-73863","GO:0001185"],"synonyms":[{"name":"RNA polymerase I transcription termination","type":"exact"},{"name":"RNA polymerase I transcription termination factor activity","type":"related"},{"name":"termination of RNA polymerase I transcription from promoter for nuclear large rRNA transcript","type":"narrow"},{"name":"transcription termination from Pol I promoter","type":"exact"},{"name":"transcription termination from RNA polymerase I promoter","type":"exact"}],"termid":"GO:0006363","terms_by_termid":{"GO:0006363":null}}


id: SO:0001482
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An enhancer that drives the pattern of transcription and binds to the same TF as the primary enhancer, but is located in the intron of or on the far side of a neighboring gene.","definition_xrefs":["PMID:22083793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enhancer","termid":"SO:0000165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shadow_enhancer","synonyms":[{"name":"shadow enhancer","type":"exact"}],"termid":"SO:0001482"}


id: PBO:0088424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle receptor beta subunit Srp102","termid":"PBO:0088424"}


id: MONDO:1012849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any muscular dystrophy that occurs in dogs due to a mutation in the SGCA gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, dog","termid":"MONDO:1010911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"limb-girdle muscular dystrophy, SGCA-related, dog","secondary_identifiers":["OMIA:002305-9615"],"synonyms":[{"name":"LGMD2D","type":"exact"},{"name":"Muscular dystrophy, limb-girdle, type R3 (LGMDR3), dog","type":"related"},{"name":"limb-girdle muscular dystrophy 2D, dog","type":"related"}],"termid":"MONDO:1012849","xrefs":{"Monarch":{"xref_id":"1012849"}}}


id: MONDO:0016399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete amino acid or protein metabolism disease with epilepsy (obsolete MONDO:0016399)","secondary_identifiers":["Orphanet:225689"],"termid":"MONDO:0016399","xrefs":{"Monarch":{"xref_id":"0016399"}}}


id: MONDO:0002728
data:
  {"annotated_genes":["SJAG_04755","SJAG_04213","SJAG_01111","SJAG_05313"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87008,87009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012252"},{"annotations":[89184,89185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"}]},"cv_name":"mondo","definition":"An aggressive malignant embryonal neoplasm usually occurring during childhood. It is characterized by the presence of large cells with abundant cytoplasm, large eccentric nucleus, and a prominent nucleolus and it is associated with abnormalities of chromosome 22. It can arise from the central nervous system, kidney, and the soft tissues. The prognosis is poor.","definition_xrefs":["NCIT:C3808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonal neoplasm","termid":"MONDO:0005564"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_04213":null,"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"rhabdoid tumor","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICDO:8963/3","NANDO:2200057","MEDGEN:64646","EFO:0005701","Orphanet:69077","UMLS:C0206743","GARD:7572","MESH:D018335","ONCOTREE:MRT","DOID:3672"],"synonyms":[{"name":"malignant rhabdoid tumor","type":"exact"},{"name":"malignant rhabdoid tumour","type":"exact"},{"name":"rhabdoid cancer","type":"related"},{"name":"rhabdoid sarcoma","type":"exact"},{"name":"rhabdoid tumor","type":"exact"}],"termid":"MONDO:0002728","terms_by_termid":{"MONDO:0012252":null,"MONDO:0013224":null},"xrefs":{"Monarch":{"xref_id":"0002728"}}}


id: PBO:0031140
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_actin_filament_organization","termid":"PBO:0031140"}


id: GO:0010211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetyl-leucine + H2O = indole-3-acetate + L-leucine.","definition_xrefs":["MetaCyc:RXN-2982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IAA-amino acid conjugate hydrolase activity","termid":"GO:0010178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"IAA-Leu conjugate hydrolase activity","termid":"GO:0010211"}


id: FYPO:0002816
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube, and in which the nucleus divides at least once to produce a multinucleate cell. The cell does not divide, and eventually dies.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated multinucleate vegetative cell","termid":"FYPO:0001493"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with elongated germ tube","termid":"FYPO:0002379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0000032","FYPO:0000002","FYPO:0000005","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, multinucleate cell with elongated germ tube","synonyms":[{"name":"inviable germinated spore, without cell division, multinucleate cell with elongated germ tube","type":"exact"},{"name":"inviable multinucleate germinated spore with elongated germ tube","type":"exact"},{"name":"lethal after spore germination, without cell division, multinucleate cell with elongated germ tube","type":"exact"},{"name":"multinucleate after spore germination with elongated germ tube","type":"exact"}],"termid":"FYPO:0002816"}


id: PBO:0027529
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_caffeine_and_rapamycin","termid":"PBO:0027529"}


id: MONDO:0004627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute or chronic inflammation of the duodenum. Causes include bacterial and viral infections and gastroesophageal reflux disease. Symptoms include vomiting and abdominal pain.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duodenal disorder","termid":"MONDO:0002866"},{"relation_name":"is_a","term_name":"enteritis","termid":"MONDO:0043579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"duodenitis","secondary_identifiers":["DOID:8643","ICD10CM:K29.8","MESH:D004382","SCTID:72007001","UMLS:C0013298","icd11.foundation:1595026136","ICD9:535.60","ICD9:535.6","MEDGEN:4419","NCIT:C94409"],"synonyms":[{"name":"duodenitis","type":"exact"},{"name":"duodenum inflammation","type":"exact"},{"name":"hemorrhagic duodenitis","type":"narrow"},{"name":"inflammation of duodenum","type":"exact"}],"termid":"MONDO:0004627","xrefs":{"Monarch":{"xref_id":"0004627"}}}


id: MONDO:1012126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease, non-human animal","termid":"MONDO:1011724"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunodeficiency disease, domestic cat","secondary_identifiers":["OMIA:000550-9685"],"termid":"MONDO:1012126","xrefs":{"Monarch":{"xref_id":"1012126"}}}


id: FYPO:0003073
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of primary amine oxidase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal primary amine oxidase activity","termid":"FYPO:0003072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"decreased primary amine oxidase activity","synonyms":[{"name":"decreased copper amine oxidase activity","type":"narrow"},{"name":"reduced primary amine oxidase activity","type":"exact"}],"termid":"FYPO:0003073"}


id: PBO:0083546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps uncharacterized gene YCR087C-A; YCR087W is not an essential gene","termid":"PBO:0083546"}


id: PBO:0056712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEMO1 pseudogene 4","termid":"PBO:0056712"}


id: MONDO:0007969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The Melkersson-Rosenthal syndrome is a rare disorder characterized by a triad of recurrent orofacial swelling, relapsing facial paralysis and fissured tongue and onset in childhood or early adolescence. It has an estimated incidence of 8/10,000. The etiology is unknown but hereditary predisposition is suspected.","definition_xrefs":["Orphanet:2483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial nerve disorder","termid":"MONDO:0002098"},{"relation_name":"is_a","term_name":"cheilitis","termid":"MONDO:0002102"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"urticaria","termid":"MONDO:0005492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Melkersson-Rosenthal syndrome","secondary_identifiers":["GARD:7010","DOID:1761","EFO:1001039","MESH:D008556","MedDRA:10027166","NCIT:C84886","NORD:1429","OMIM:155900","MEDGEN:6291","UMLS:C0025235"],"synonyms":[{"name":"MRS","type":"related"},{"name":"Melkersson syndrome","type":"related"},{"name":"Melkersson's syndrome","type":"exact"},{"name":"Melkersson-Rosenthal syndrome","type":"exact"},{"name":"Mros","type":"related"},{"name":"cheilitis Granulomatosa","type":"related"},{"name":"cheilitis granulomatosa of Mescher-Melkersson-Rosenthal","type":"exact"}],"termid":"MONDO:0007969","xrefs":{"Monarch":{"xref_id":"0007969"}}}


id: PBO:0073111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 39U member 1","termid":"PBO:0073111"}


id: PBO:0075952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducing adaptor molecule","termid":"PBO:0075952"}


id: FYECO:0000242
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which rapamycin was added to the medium or assay buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ rapamycin","synonyms":[{"name":"+ sirolimus","type":"exact"}],"termid":"FYECO:0000242"}


id: GO:0002225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antimicrobial peptide production.","definition_xrefs":["GOC:add","PMID:11807545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of production of molecular mediator of immune response","termid":"GO:0002702"},{"relation_name":"is_a","term_name":"positive regulation of antimicrobial humoral response","termid":"GO:0002760"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide production","termid":"GO:0002784"},{"relation_name":"positively_regulates","term_name":"antimicrobial peptide production","termid":"GO:0002775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of antimicrobial peptide production","synonyms":[{"name":"activation of antimicrobial peptide production","type":"narrow"},{"name":"antimicrobial peptide induction","type":"exact"},{"name":"stimulation of antimicrobial peptide production","type":"narrow"},{"name":"up regulation of antimicrobial peptide production","type":"exact"},{"name":"up-regulation of antimicrobial peptide production","type":"exact"},{"name":"upregulation of antimicrobial peptide production","type":"exact"}],"termid":"GO:0002225"}


id: PR:O14355
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC30D10.09c gene.","definition_xrefs":["UniProtKB:O14355","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C30D10.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.09c","synonyms":[{"name":"Spom972h-SPBC30D10.09c","type":"exact"}],"termid":"PR:O14355"}


id: MONDO:0032811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital stationary night blindness","termid":"MONDO:0016293"},{"relation_name":"is_a","term_name":"GUCY2D-related recessive retinopathy","termid":"MONDO:0100453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"night blindness, congenital stationary, type1i","secondary_identifiers":["MEDGEN:1684817","GARD:16364","OMIM:618555","UMLS:C5231408"],"synonyms":[{"name":"CSNB1I","type":"exact"},{"name":"NIGHT BLINDNESS, CONGENITAL STATIONARY, TYPE1I","type":"exact"},{"name":"night blindness, congenital stationary, type 1I","type":"exact"}],"termid":"MONDO:0032811","xrefs":{"Monarch":{"xref_id":"0032811"}}}


id: PBO:0085071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nonhistone component of centromeric chromatin; binds to histone H3 variant, Cse4p, and recruits it to centromeres; involved in the assembly and maintenance of Cse4-H4 at centromeres; required for kinetochore assembly and G2/M progression; may protect Cse4p from ubiquitination; homolog of mammalian HJURP","termid":"PBO:0085071"}


id: MONDO:0015681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare pervasive developmental disorder with a disease onset before the age of three and characterized by a dramatic loss of behavioral and developmental functioning after atleast two years of normal development. Manifestations of the disease include loss of speech, incontinence, communication and social interaction problems, stereotypical autistic behaviors and dementia.","definition_xrefs":["Orphanet:168782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pervasive developmental disorder","termid":"MONDO:0000594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"childhood disintegrative disorder","secondary_identifiers":["ICD9:299.1","icd11.foundation:1460615954","SCTID:71961003","GARD:6040","DOID:13487","UMLS:C0236791","SCTID:61831009","MedDRA:10008522","NCIT:C97164","MEDGEN:472967"],"synonyms":[{"name":"childhood disintegrative disease","type":"exact"},{"name":"dementia infantilis","type":"exact"},{"name":"disintegrative psychosis","type":"exact"},{"name":"heller syndrome","type":"exact"},{"name":"heller's syndrome","type":"exact"},{"name":"symbiotic psychosis","type":"exact"}],"termid":"MONDO:0015681","xrefs":{"Monarch":{"xref_id":"0015681"}}}


id: PR:Q10413
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F3.08c gene.","definition_xrefs":["UniProtKB:Q10413","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F3.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.08c","synonyms":[{"name":"Spom972h-SPAC1F3.08c","type":"exact"}],"termid":"PR:Q10413"}


id: PBO:0074123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC30A6 pseudogene 1","termid":"PBO:0074123"}


id: PBO:0076404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 2","termid":"PBO:0076404"}


id: MONDO:0015695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of combined immunodeficiency characterized by recurrent infections, autoimmunity, congenital myopathy and ectodermal dysplasia. It comprises two sub-types that are due to mutations in the ORAI1 and STIM1 genes: CID due to ORAI1 deficiency and CID due to STIM1 deficiency.","definition_xrefs":["Orphanet:169090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency due to CRAC channel dysfunction","secondary_identifiers":["GARD:17048","SCTID:717811007","icd11.foundation:1641826886","MEDGEN:929240","UMLS:C4303571"],"synonyms":[{"name":"immune dysfunction due to T-cell inactivation due to calcium entry defect","type":"exact"}],"termid":"MONDO:0015695","xrefs":{"Monarch":{"xref_id":"0015695"}}}


id: GO:0034330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cell junction. A cell junction is a specialized region of connection between two cells or between a cell and the extracellular matrix.","definition_xrefs":["GOC:jl","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell junction organization","synonyms":[{"name":"cell junction assembly and maintenance","type":"exact"},{"name":"cell junction biogenesis","type":"related"},{"name":"cell junction organisation","type":"exact"}],"termid":"GO:0034330"}


id: MONDO:0014346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary mucosal leukokeratosis","termid":"MONDO:0015748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"white sponge nevus 2","secondary_identifiers":["UMLS:C4014321","MEDGEN:862758","GARD:16012","OMIM:615785","DOID:0081288"],"synonyms":[{"name":"WHITE sponge NEVUS 2","type":"related"},{"name":"WSN2","type":"related"},{"name":"White sponge Nevus type 2","type":"exact"},{"name":"white sponge nevus 2","type":"exact"}],"termid":"MONDO:0014346","xrefs":{"Monarch":{"xref_id":"0014346"}}}


id: SO:0000200
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The 5' most coding exon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_exon","termid":"SO:0000195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_coding_exon","synonyms":[{"name":"5' coding exon","type":"exact"},{"name":"five prime coding exon","type":"exact"}],"termid":"SO:0000200"}


id: MONDO:1011205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Van den Ende-Gupta syndrome that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Van den Ende-Gupta syndrome, non-human animal","termid":"MONDO:1010314"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Van den Ende-Gupta syndrome, dog","secondary_identifiers":["OMIA:002016-9615"],"termid":"MONDO:1011205","xrefs":{"Monarch":{"xref_id":"1011205"}}}


id: PBO:0027868
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_oscillation_during_mitotic_cell_cycle","termid":"PBO:0027868"}


id: GO:0036056
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized cell-cell junction found between the cells of the excretory system, which provides a barrier for filtration of blood or hemolymph.","definition_xrefs":["PMID:18971929","GOC:mtg_kidney_jan10","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"filtration diaphragm","termid":"GO:0036056"}


id: GO:0072487
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A histone acetyltransferase complex that catalyzes the acetylation of a histone H4 lysine residue at position 16. In human, it contains the catalytic subunit MOF, and MSL1, MSL2 and MSL3.","definition_xrefs":["PMID:20018852","PMID:16227571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H4 histone acetyltransferase complex","termid":"GO:1902562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"MSL complex","termid":"GO:0072487"}


id: GO:1902214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-4-mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:17210636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-4-mediated signaling pathway","termid":"GO:0035771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of interleukin-4-mediated signaling pathway","synonyms":[{"name":"regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"regulation of interleukin-4-mediated signalling pathway","type":"exact"}],"termid":"GO:1902214"}


id: PR:Q9P804
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N(2),N(2)-dimethylguanosine tRNA methyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10631:SF0","OMA:SCHPO03824","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine(26)-N(2))-dimethyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25D12.05","secondary_identifiers":["UniProtKB:Q9P804"],"synonyms":[{"name":"Spom972h-TRMT1","type":"exact"},{"name":"tRNA 2,2-dimethylguanosine-26 methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(guanine-26,N(2)-N(2)) methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(m(2,2)G26)dimethyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P804"}


id: GO:0047723
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + IMP = D-ribose 5-phosphate + hypoxanthine.","definition_xrefs":["RHEA:20469","EC:3.2.2.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inosinate nucleosidase activity","secondary_identifiers":["KEGG_REACTION:R01128","MetaCyc:INOSINATE-NUCLEOSIDASE-RXN"],"synonyms":[{"name":"5'-inosinate phosphoribohydrolase activity","type":"related"}],"termid":"GO:0047723"}


id: GO:0036404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which double-stranded small interfering RNA (ds siRNA) molecules are converted to single-stranded small interfering RNA (ss siRNA).","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete conversion of ds siRNA to ss siRNA (obsolete GO:0036404)","synonyms":[{"name":"conversion of double-stranded small interfering RNA to single-stranded small interfering RNA","type":"related"}],"termid":"GO:0036404"}


id: GO:1903615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of protein tyrosine phosphatase activity.","definition_xrefs":["GO_REF:0000059","PMID:11129957","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of protein tyrosine phosphatase activity (obsolete GO:1903615)","synonyms":[{"name":"activation of PPT-phosphatase activity","type":"narrow"},{"name":"activation of PTP-phosphatase activity","type":"narrow"},{"name":"activation of PTPase activity","type":"narrow"},{"name":"activation of [phosphotyrosine]protein phosphatase activity","type":"narrow"},{"name":"activation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"narrow"},{"name":"activation of phosphotyrosine histone phosphatase activity","type":"narrow"},{"name":"activation of phosphotyrosine phosphatase activity","type":"narrow"},{"name":"activation of phosphotyrosine protein phosphatase activity","type":"narrow"},{"name":"activation of phosphotyrosylprotein phosphatase activity","type":"narrow"},{"name":"activation of protein phosphotyrosine phosphatase activity","type":"narrow"},{"name":"activation of protein tyrosine phosphatase activity","type":"narrow"},{"name":"activation of protein-tyrosine-phosphatase activity","type":"narrow"},{"name":"activation of protein-tyrosine-phosphate phosphohydrolase activity","type":"narrow"},{"name":"activation of tyrosine O-phosphate phosphatase activity","type":"narrow"},{"name":"activation of tyrosylprotein phosphatase activity","type":"narrow"},{"name":"positive regulation of PPT-phosphatase activity","type":"exact"},{"name":"positive regulation of PTP-phosphatase activity","type":"exact"},{"name":"positive regulation of PTPase activity","type":"exact"},{"name":"positive regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"positive regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"positive regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"positive regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"positive regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"positive regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"positive regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"positive regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"positive regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"positive regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"positive regulation of tyrosylprotein phosphatase activity","type":"exact"},{"name":"up regulation of PPT-phosphatase activity","type":"exact"},{"name":"up regulation of PTP-phosphatase activity","type":"exact"},{"name":"up regulation of PTPase activity","type":"exact"},{"name":"up regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"up regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"up regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"up regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"up regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"up regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"up regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"up regulation of protein tyrosine phosphatase activity","type":"exact"},{"name":"up regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"up regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"up regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"up regulation of tyrosylprotein phosphatase activity","type":"exact"},{"name":"up-regulation of PPT-phosphatase activity","type":"exact"},{"name":"up-regulation of PTP-phosphatase activity","type":"exact"},{"name":"up-regulation of PTPase activity","type":"exact"},{"name":"up-regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"up-regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"up-regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"up-regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"up-regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"up-regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"up-regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"up-regulation of protein tyrosine phosphatase activity","type":"exact"},{"name":"up-regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"up-regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"up-regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"up-regulation of tyrosylprotein phosphatase activity","type":"exact"},{"name":"upregulation of PPT-phosphatase activity","type":"exact"},{"name":"upregulation of PTP-phosphatase activity","type":"exact"},{"name":"upregulation of PTPase activity","type":"exact"},{"name":"upregulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"upregulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"upregulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"upregulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"upregulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"upregulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"upregulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"upregulation of protein tyrosine phosphatase activity","type":"exact"},{"name":"upregulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"upregulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"upregulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"upregulation of tyrosylprotein phosphatase activity","type":"exact"}],"termid":"GO:1903615"}


id: MONDO:0957217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complex cortical dysplasia with other brain malformations","termid":"MONDO:0000904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical dysplasia, complex, with other brain malformations 12","secondary_identifiers":["MEDGEN:1841043","OMIM:620316","UMLS:C5830407"],"termid":"MONDO:0957217","xrefs":{"Monarch":{"xref_id":"0957217"}}}


id: FYPO:0003626
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the tip of a shmoo, or mating projection, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to shmoo tip","synonyms":[{"name":"normal protein localisation to shmoo tip","type":"exact"},{"name":"normal protein localization to mating projection tip","type":"exact"},{"name":"normal protein localization to shmoo projection","type":"exact"}],"termid":"FYPO:0003626"}


id: PR:Q9C0Y8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB24D3.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0Y8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0613 protein PB24D3.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.06c","synonyms":[{"name":"Spom972h-SPAPB24D3.06c","type":"exact"}],"termid":"PR:Q9C0Y8"}


id: PBO:0049313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase theta 2 (gene/pseudogene)","termid":"PBO:0049313"}


id: GO:1902992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of amyloid precursor protein catabolic process.","definition_xrefs":["GO_REF:0000058","GOC:rl","GOC:PARL","GOC:TermGenie","PMID:24499793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"is_a","term_name":"regulation of amyloid precursor protein catabolic process","termid":"GO:1902991"},{"relation_name":"negatively_regulates","term_name":"amyloid precursor protein catabolic process","termid":"GO:0042987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amyloid precursor protein catabolic process","synonyms":[{"name":"down regulation of APP catabolic process","type":"exact"},{"name":"down regulation of APP catabolism","type":"exact"},{"name":"down regulation of amyloid precursor protein breakdown","type":"exact"},{"name":"down regulation of amyloid precursor protein catabolic process","type":"exact"},{"name":"down regulation of amyloid precursor protein catabolism","type":"exact"},{"name":"down regulation of amyloid precursor protein degradation","type":"exact"},{"name":"down-regulation of APP catabolic process","type":"exact"},{"name":"down-regulation of APP catabolism","type":"exact"},{"name":"down-regulation of amyloid precursor protein breakdown","type":"exact"},{"name":"down-regulation of amyloid precursor protein catabolic process","type":"exact"},{"name":"down-regulation of amyloid precursor protein catabolism","type":"exact"},{"name":"down-regulation of amyloid precursor protein degradation","type":"exact"},{"name":"downregulation of APP catabolic process","type":"exact"},{"name":"downregulation of APP catabolism","type":"exact"},{"name":"downregulation of amyloid precursor protein breakdown","type":"exact"},{"name":"downregulation of amyloid precursor protein catabolic process","type":"exact"},{"name":"downregulation of amyloid precursor protein catabolism","type":"exact"},{"name":"downregulation of amyloid precursor protein degradation","type":"exact"},{"name":"inhibition of APP catabolic process","type":"narrow"},{"name":"inhibition of APP catabolism","type":"narrow"},{"name":"inhibition of amyloid precursor protein breakdown","type":"narrow"},{"name":"inhibition of amyloid precursor protein catabolic process","type":"narrow"},{"name":"inhibition of amyloid precursor protein catabolism","type":"narrow"},{"name":"inhibition of amyloid precursor protein degradation","type":"narrow"},{"name":"negative regulation of APP catabolic process","type":"exact"},{"name":"negative regulation of APP catabolism","type":"exact"},{"name":"negative regulation of amyloid precursor protein breakdown","type":"exact"},{"name":"negative regulation of amyloid precursor protein catabolism","type":"exact"},{"name":"negative regulation of amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902992"}


id: GO:0036051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, the trailing edge. The trailing edge is the area of a motile cell opposite to the direction of movement.","definition_xrefs":["GOC:pg","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to trailing edge","synonyms":[{"name":"protein localisation to trailing edge","type":"exact"}],"termid":"GO:0036051"}


id: GO:0043223
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex, located in the cytoplasm, in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1).","definition_xrefs":["PMID:15571813","PMID:15688063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ubiquitin ligase complex","termid":"GO:0000153"},{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic SCF ubiquitin ligase complex","synonyms":[{"name":"cytoplasmic SCF complex","type":"exact"},{"name":"cytoplasmic Skp1/Cul1/F-box protein complex","type":"exact"},{"name":"cytoplasmic cullin complex","type":"exact"}],"termid":"GO:0043223"}


id: GO:1903978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microglial cell activation.","definition_xrefs":["GOC:nc","GO_REF:0000058","GOC:TermGenie","GOC:BHF","PMID:19100238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macrophage activation","termid":"GO:0043030"},{"relation_name":"is_a","term_name":"regulation of neuroinflammatory response","termid":"GO:0150077"},{"relation_name":"regulates","term_name":"microglial cell activation","termid":"GO:0001774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of microglial cell activation","termid":"GO:1903978"}


id: PBO:0031348
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_at_high_temperature","termid":"PBO:0031348"}


id: GO:0090687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts the inactive process of a meiosis I cell cycle spindle assembly checkpoint.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of meiosis I spindle assembly checkpoint","termid":"GO:1905326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0023052","GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"activation of meiosis I spindle assembly checkpoint","termid":"GO:0090687"}


id: MONDO:0021298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the oropharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharynx carcinoma in situ","termid":"MONDO:0000372"},{"relation_name":"is_a","term_name":"oropharyngeal carcinoma","termid":"MONDO:0044926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"carcinoma in situ of oropharynx","secondary_identifiers":["UMLS:C0347099","icd11.foundation:364791852","NCIT:C4590","SCTID:92668003","MEDGEN:83852"],"synonyms":[{"name":"carcinoma in situ of oropharynx","type":"exact"},{"name":"carcinoma in situ of the oropharynx","type":"exact"},{"name":"oropharyngeal cancer stage 0","type":"exact"},{"name":"oropharyngeal carcinoma in situ","type":"exact"},{"name":"oropharynx carcinoma in situ","type":"exact"},{"name":"oropharynx in situ carcinoma","type":"exact"},{"name":"stage 0 carcinoma of oropharynx","type":"exact"},{"name":"stage 0 carcinoma of the oropharynx","type":"exact"},{"name":"stage 0 oropharyngeal cancer","type":"exact"},{"name":"stage 0 oropharyngeal carcinoma","type":"exact"},{"name":"stage 0 oropharyngeal carcinoma aJCC v6","type":"exact"},{"name":"stage 0 oropharyngeal carcinoma aJCC v6 and v7","type":"exact"},{"name":"stage 0 oropharyngeal carcinoma aJCC v7","type":"exact"},{"name":"stage 0 oropharyngeal carcinoma in situ","type":"exact"},{"name":"stage 0 oropharyngeal throat cancer","type":"exact"},{"name":"stage 0 oropharynx carcinoma","type":"exact"}],"termid":"MONDO:0021298","xrefs":{"Monarch":{"xref_id":"0021298"}}}


id: PR:O14122
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cullin-4B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01441","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin-4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.08","secondary_identifiers":["UniProtKB:O14122"],"synonyms":[{"name":"Cul-4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CUL4B","type":"exact"}],"termid":"PR:O14122"}


id: GO:0072092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the ureteric bud grows along its axis and contributes to the formation of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"ureteric bud elongation","termid":"GO:0060677"},{"relation_name":"part_of","term_name":"metanephric renal vesicle formation","termid":"GO:0072093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureteric bud invasion","termid":"GO:0072092"}


id: PBO:0079794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member A2","termid":"PBO:0079794"}


id: PBO:0030558
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutamate_import_during_nitrogen_starvation","termid":"PBO:0030558"}


id: MONDO:0030335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital diarrhea","termid":"MONDO:0000824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diarrhea 12, with microvillus atrophy","secondary_identifiers":["UMLS:C5561942","MEDGEN:1794152","OMIM:619445"],"synonyms":[{"name":"DIAR12","type":"exact"},{"name":"diarrhea 12, with microvillus atrophy","type":"exact"},{"name":"microvillus inclusion disease 2","type":"exact"}],"termid":"MONDO:0030335","xrefs":{"Monarch":{"xref_id":"0030335"}}}


id: PBO:0047907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(8)(q24.3)","termid":"PBO:0047907"}


id: MOD:00822
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-leucine residue and an L-cysteine residue by a thioester bond to form S-(L-leucyl)-L-cysteine.","definition_xrefs":["RESID:AA0412","PubMed:12591958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-leucine residue","termid":"MOD:02050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(L-leucyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S)-2-amino-4-methylpentanoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"CROSSLNK Leucyl cysteine thioester (Cys-Leu)","type":"exact"},{"name":"S-(2-amino-4-methylpentanoyl)cysteine","type":"exact"},{"name":"S-(L-leucyl)-L-cysteine","type":"exact"},{"name":"XLNK1LeuSCys","type":"exact"},{"name":"leucine cysteine thioester","type":"exact"}],"termid":"MOD:00822"}


id: PBO:0045711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAZ interacting zinc finger protein 1 like","termid":"PBO:0045711"}


id: PATO:0001275
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of magenta color and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"magenta","termid":"PATO:0000321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated magenta","synonyms":[{"name":"bright magenta","type":"related"}],"termid":"PATO:0001275"}


id: GO:0031357
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the chloroplast inner membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of chloroplast inner membrane (obsolete GO:0031357)","synonyms":[{"name":"integral to chloroplast inner membrane","type":"narrow"}],"termid":"GO:0031357"}


id: PBO:0028612
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_adenylate_kinase_activity","termid":"PBO:0028612"}


id: PBO:0017564
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUclear Pore factor","termid":"PBO:0017564"}


id: PBO:0004019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucan synthase catalytic subunit Bgs1","termid":"PBO:0004019"}


id: SO:0001808
data:
  {"annotated_genes":["SJAG_02217","SJAG_00659","SJAG_02353","SJAG_00695","SJAG_05271"],"annotation_feature_type":"gene","cv_annotations":{"sequence":[{"annotations":[82269,82322,82409,82496,82500],"is_not":false,"summary":null,"term":"SO:0001808"}]},"cv_name":"sequence","definition":"A polypeptide region that targets a polypeptide to the mitochondrion.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_localization_signal","termid":"SO:0001527"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00659":null,"SJAG_00695":null,"SJAG_02217":null,"SJAG_02353":null,"SJAG_05271":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"mitochondrial_targeting_signal","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"MTS","type":"exact"},{"name":"mitochondrial signal sequence","type":"exact"},{"name":"mitochondrial targeting signal","type":"exact"}],"termid":"SO:0001808","terms_by_termid":{"SO:0001808":null}}


id: GO:1901848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nicotinate.","definition_xrefs":["GOC:yaf","UniPathway:UPA00830","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid catabolic process","termid":"GO:0009822"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"pyridine-containing compound catabolic process","termid":"GO:0072526"},{"relation_name":"is_a","term_name":"nicotinate metabolic process","termid":"GO:1901847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nicotinate catabolic process","synonyms":[{"name":"nicotinate breakdown","type":"exact"},{"name":"nicotinate catabolism","type":"exact"},{"name":"nicotinate degradation","type":"exact"}],"termid":"GO:1901848"}


id: GO:0004866
data:
  {"annotated_genes":["SJAG_04633","SJAG_01072","SJAG_00460","SJAG_04398"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63776,67722,105214],"is_not":false,"summary":null,"term":"GO:0004866"},{"annotations":[95067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004867"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of an endopeptidase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase inhibitor activity","termid":"GO:0030414"},{"relation_name":"is_a","term_name":"endopeptidase regulator activity","termid":"GO:0061135"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_01072":null,"SJAG_04398":null,"SJAG_04633":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0004857","GO:0098772","GO:0140678"],"is_obsolete":false,"name":"endopeptidase inhibitor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"alpha-2 macroglobulin","type":"related"},{"name":"endoproteinase inhibitor","type":"narrow"},{"name":"proteinase inhibitor","type":"narrow"}],"termid":"GO:0004866","terms_by_termid":{"GO:0004866":null,"GO:0004867":null}}


id: GO:0160047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + muramyl dipeptide = ADP + H+ + 6-O-phospho-muramyl dipeptide.","definition_xrefs":["PMID:36002575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"muramyl dipeptide kinase activity","secondary_identifiers":["RHEA:75935"],"termid":"GO:0160047"}


id: GO:0031760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an Edg-7 lysophosphatidic acid receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial differentiation G protein-coupled receptor binding","termid":"GO:0031753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"Edg-7 lysophosphatidic acid receptor binding","synonyms":[{"name":"Edg-7 lysophosphatidic acid receptor ligand","type":"narrow"},{"name":"LPA3 receptor binding","type":"exact"}],"termid":"GO:0031760"}


id: MONDO:0100253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic syndrome with an autosomal recessive pattern of inheritance. It is caused by a mutation in the ESCO2 gene. Clinical signs at birth include multiple limb and facial abnormalities.","definition_xrefs":["NCIT:C4681","PMID:18411254"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete Mendelian syndromes with cleft lip/palate (obsolete MONDO:0015335)","termid":"MONDO:0015335"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome with limb reduction defects (obsolete MONDO:0017432)","termid":"MONDO:0017432"},{"relation_name":"excluded_subClassOf","term_name":"obsolete dysostosis of genetic origin with limb anomaly as a major feature (obsolete MONDO:0018455)","termid":"MONDO:0018455"},{"relation_name":"excluded_subClassOf","term_name":"obsolete musculoskeletal disease with cataract (obsolete MONDO:0020232)","termid":"MONDO:0020232"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Roberts-SC phocomelia syndrome","secondary_identifiers":["DOID:0050536","SCTID:48718006","MESH:C535687","UMLS:C0392475","OMIM:268300","OMIM:269000","GARD:7387","MEDGEN:95931","DOID:5325","Orphanet:3103"],"synonyms":[{"name":"Appelt-Gerken-Lenz syndrome","type":"exact"},{"name":"ESCO2 spectrum disorder","type":"exact"},{"name":"RBS","type":"exact"},{"name":"Roberts syndrome","type":"exact"},{"name":"Roberts syndrome/SC phocomelia","type":"exact"},{"name":"Roberts tetraphocomelia syndrome","type":"exact"},{"name":"Roberts-SC phocomelia syndrome","type":"exact"},{"name":"SC phocomelia","type":"narrow"},{"name":"SC phocomelia syndrome","type":"exact"},{"name":"SC phocomelia syndrome (mild variant of Roberts syndrome)","type":"narrow"},{"name":"SC pseudothalidomide syndrome","type":"narrow"},{"name":"hypomelia hypotrichosis facial hemangioma syndrome","type":"exact"},{"name":"long bone deficiencies associated with cleft lip-palate","type":"exact"},{"name":"phocomelia-pseudothalidomide syndrome","type":"exact"},{"name":"pseudothalidomide syndrome","type":"exact"},{"name":"tetraphocomelia-cleft palate syndrome","type":"exact"}],"termid":"MONDO:0100253","xrefs":{"Monarch":{"xref_id":"0100253"}}}


id: PBO:0025529
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chylomicron retention disease","termid":"PBO:0025529"}


id: PBO:0001469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mpv17/PMP22 family protein 2 (predicted)","termid":"PBO:0001469"}


id: PBO:0053093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 3A","termid":"PBO:0053093"}


id: PBO:0117033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYRM9 antisense RNA 1","termid":"PBO:0117033"}


id: MONDO:0037738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the cauda equina.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cauda equina neoplasm","termid":"MONDO:0003164"},{"relation_name":"is_a","term_name":"peripheral nervous system cancer","termid":"MONDO:0021089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cauda equina cancer","secondary_identifiers":["MEDGEN:578608","UMLS:C0349017","SCTID:363477002"],"synonyms":[{"name":"cancer of cauda equina","type":"exact"},{"name":"malignant cauda equina neoplasm","type":"exact"},{"name":"malignant neoplasm of cauda equina","type":"exact"}],"termid":"MONDO:0037738","xrefs":{"Monarch":{"xref_id":"0037738"}}}


id: PBO:0028905
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_cellular_response_to_calcium_ion","termid":"PBO:0028905"}


id: MONDO:0009242
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brittle cornea syndrome is a form of Ehlers-Danlos syndrome characterized by a severe ocular manifestations due to extreme corneal thinning and fragility with rupture in the absence of significant trauma, and progression to blindness. Extraocular manifestations comprise deafness, developmental hip dysplasia, and joint hypermobility.","definition_xrefs":["Orphanet:90354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025"],"is_obsolete":false,"name":"brittle cornea syndrome","secondary_identifiers":["MESH:C536198","DOID:14775","GARD:1019","OMIMPS:229200","SCTID:719096006"],"synonyms":[{"name":"BCS1","type":"related"},{"name":"EDS VIB (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome type 6B (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome type 6b","type":"related"},{"name":"brittle cornea syndrome","type":"exact"},{"name":"brittle cornea syndrome 1","type":"related"},{"name":"brittle cornea syndrome 2","type":"narrow"},{"name":"brittle cornea syndrome type 1","type":"exact"},{"name":"kyphoscoliosis type","type":"exact"},{"name":"type VIB Ehlers-Danlos syndrome","type":"exact"}],"termid":"MONDO:0009242","xrefs":{"Monarch":{"xref_id":"0009242"}}}


id: SO:0001763
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A physical quality which inheres to the variant by virtue of the number instances of the variant within a population.","definition_xrefs":["PMID:17597783","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variant_quality","termid":"SO:0001761"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant_frequency","synonyms":[{"name":"variant frequency","type":"exact"}],"termid":"SO:0001763"}


id: GO:0003169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of veins of the heart are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venous blood vessel morphogenesis","termid":"GO:0048845"},{"relation_name":"is_a","term_name":"coronary vasculature morphogenesis","termid":"GO:0060977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coronary vein morphogenesis","termid":"GO:0003169"}


id: PBO:0051131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 2-70","termid":"PBO:0051131"}


id: PBO:0079612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 I","termid":"PBO:0079612"}


id: GO:0000716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The identification of lesions on the actively transcribed strand of the DNA duplex as well as a small subset of lesions not recognized by the general nucleotide-excision repair pathway.","definition_xrefs":["GOC:elh","PMID:10197977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair, DNA damage recognition","termid":"GO:0000715"},{"relation_name":"part_of","term_name":"transcription-coupled nucleotide-excision repair","termid":"GO:0006283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"transcription-coupled nucleotide-excision repair, DNA damage recognition","synonyms":[{"name":"pyrimidine-dimer repair, DNA damage recognition","type":"related"}],"termid":"GO:0000716"}


id: PBO:0080496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor D and EGF domains","termid":"PBO:0080496"}


id: PBO:0060710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 7","termid":"PBO:0060710"}


id: FYPO:0004141
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of glutathione (GSH) measured in a cell that is subject to nitrogen starvation is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"},{"relation_name":"is_a","term_name":"altered level of substance in cell during nitrogen starvation","termid":"FYPO:0004139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular glutathione level during nitrogen starvation","synonyms":[{"name":"decreased cellular GSH level during nitrogen starvation","type":"exact"},{"name":"decreased cellular L-gamma-glutamyl-L-cysteinylglycine level during nitrogen starvation","type":"exact"},{"name":"decreased cellular glutathione level during nitrogen depletion","type":"exact"},{"name":"decreased cellular glutathione level during nitrogen deprivation","type":"exact"},{"name":"decreased cellular reduced glutathione level during nitrogen starvation","type":"exact"},{"name":"decreased glutathione accumulation during nitrogen starvation","type":"related"},{"name":"reduced cellular glutathione level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0004141"}


id: PBO:0056724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylphosphate capping enzyme","termid":"PBO:0056724"}


id: MONDO:0957400
data:
  {"annotated_genes":["SJAG_04754","SJAG_00566"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958178"},{"annotations":[88174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958193"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00566":null,"SJAG_04754":null},"genotype_count":0,"is_obsolete":false,"name":"cataracts, hearing impairment, nephrotic syndrome, and enterocolitis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:301108"],"termid":"MONDO:0957400","terms_by_termid":{"MONDO:0958178":null,"MONDO:0958193":null},"xrefs":{"Monarch":{"xref_id":"0957400"}}}


id: PBO:0055016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2431","termid":"PBO:0055016"}


id: PBO:0091948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal reductase","termid":"PBO:0091948"}


id: GO:0075296
data:
  {"annotated_genes":["SJAG_02169","SJAG_04853"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104222],"is_not":false,"summary":null,"term":"GO:0075296"},{"annotations":[92600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of ascospore formation, a process in which a sexual spore, named ascospore, from Ascomycete fungi was produced inside an ascus.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of ascospore formation","termid":"GO:0034307"},{"relation_name":"is_a","term_name":"positive regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043941"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"ascospore formation","termid":"GO:0030437"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02169":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0030437"},{"rel_name":"regulates","termid":"GO:0030437"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030437","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ascospore formation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0075296","terms_by_termid":{"GO:0075296":null,"GO:1903024":null}}


id: MONDO:1011142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Choanal atresia that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choanal atresia, non-human animal","termid":"MONDO:1010289"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choanal atresia, horse","secondary_identifiers":["OMIA:001764-9796"],"termid":"MONDO:1011142","xrefs":{"Monarch":{"xref_id":"1011142"}}}


id: PR:P41888
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tnr3 gene.","definition_xrefs":["UniProtKB:P41888","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine pyrophosphokinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.05c","synonyms":[{"name":"Spom972h-tnr3","type":"exact"},{"name":"TPK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"thiamine kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41888"}


id: FYPO:0003266
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity is normal (i.e. indistinguishable from wild type) during a cellular response to nutrient.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal alpha,alpha-trehalase activity","termid":"FYPO:0001480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal alpha,alpha-trehalase activity during cellular response to nutrient","synonyms":[{"name":"normal alpha,alpha-trehalase activity in response to nutrient","type":"exact"},{"name":"normal neutral trehalase activity during cellular response to nutrient","type":"exact"},{"name":"normal trehalase activity during cellular response to nutrient","type":"broad"}],"termid":"FYPO:0003266"}


id: PBO:0034165
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_disappearance_of","termid":"PBO:0034165"}


id: MONDO:0001751
data:
  {"annotated_genes":["SJAG_05194","SJAG_00938","SJAG_03363","SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011559"},{"annotations":[88891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013995"},{"annotations":[88825,88826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030810"},{"annotations":[87701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031040"},{"annotations":[88757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011156"},{"annotations":[87366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011214"}]},"cv_name":"mondo","definition":"Impairment of the bile flow caused by obstruction within the liver, or outside the liver in the bile duct system.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct disorder","termid":"MONDO:0002887"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null,"SJAG_03363":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"cholestasis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0008370","ICD9:576.2","DOID:13580","MESH:D002779","MEDGEN:925","SCTID:30144000"],"synonyms":[{"name":"bile occlusion","type":"exact"},{"name":"obstruction of bile duct","type":"exact"}],"termid":"MONDO:0001751","terms_by_termid":{"MONDO:0011156":null,"MONDO:0011214":null,"MONDO:0011559":null,"MONDO:0013995":null,"MONDO:0030810":null,"MONDO:0031040":null},"xrefs":{"Monarch":{"xref_id":"0001751"}}}


id: GO:0071040
data:
  {"annotated_genes":["SJAG_01717","SJAG_03745","SJAG_01176"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72378,90235,108222],"is_not":false,"summary":null,"term":"GO:0071040"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the nucleus and resulting in the breakdown of an antisense transcript, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target antisense transcript.","definition_xrefs":["GOC:krc","GOC:dgf","PMID:18022365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antisense RNA transcript catabolic process","termid":"GO:0071041"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01176":null,"SJAG_01717":null,"SJAG_03745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear polyadenylation-dependent antisense transcript catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nuclear poly(A)-dependent antisense transcript catabolic process","type":"related"}],"termid":"GO:0071040","terms_by_termid":{"GO:0071040":null}}


id: SO:0002047
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Transcription pause sites are regions of a gene where RNA polymerase may pause during transcription. The functional role of pausing may be to facilitate factor recruitment, RNA folding, and synchronization with translation. Consensus transcription pause site have been observed in E. coli.","definition_xrefs":["SO:ke","PMID:24789973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription_pause_site","synonyms":[{"name":"transcription pause site","type":"exact"}],"termid":"SO:0002047"}


id: GO:0030986
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a kininogen of low molecular mass.","definition_xrefs":["GOC:mah","PMID:9520414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kininogen binding","termid":"GO:0030984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"low molecular weight kininogen binding","synonyms":[{"name":"LK binding","type":"exact"},{"name":"LMW kininogen binding","type":"exact"}],"termid":"GO:0030986"}


id: GO:0005729
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plasmid commonly found in Saccharomyces, inherited in a non-Mendelian manner and often present in 100-400 copies.","definition_xrefs":["PMID:12073320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrachromosomal circular DNA","termid":"GO:0005727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"2-micrometer circle DNA","termid":"GO:0005729"}


id: GO:0019792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete APG12 hydrolase activity (obsolete GO:0019792)","synonyms":[{"name":"APG12 hydrolase activity","type":"exact"}],"termid":"GO:0019792"}


id: PBO:0070071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 28, pseudogene","termid":"PBO:0070071"}


id: GO:0047795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-cyclohexane-1,2-diol + NAD+ = 2-hydroxycyclohexan-1-one + NADH.","definition_xrefs":["EC:1.1.1.174","MetaCyc:CYCLOHEXANE-12-DIOL-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"cyclohexane-1,2-diol dehydrogenase activity","secondary_identifiers":["RHEA:18141"],"synonyms":[{"name":"trans-cyclohexane-1,2-diol:NAD+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047795"}


id: GO:0000747
data:
  {"annotated_genes":["SJAG_01113","SJAG_01171","SJAG_02864","SJAG_05001","SJAG_02351","SJAG_02718","SJAG_02266","SJAG_05016","SJAG_00526","SJAG_00117","SJAG_03974","SJAG_00600","SJAG_03309","SJAG_01943","SJAG_04155","SJAG_02785","SJAG_04813","SJAG_02426","SJAG_04887","SJAG_02602","SJAG_02066","SJAG_03646","SJAG_02045","SJAG_02924","SJAG_01718","SJAG_00870","SJAG_01894","SJAG_03346","SJAG_02486","SJAG_04009","SJAG_04682","SJAG_00993","SJAG_01978","SJAG_03453","SJAG_00140","SJAG_01370","SJAG_02723","SJAG_01345","SJAG_00781","SJAG_01754","SJAG_02233","SJAG_01509","SJAG_04206","SJAG_01613","SJAG_06638","SJAG_04982","SJAG_01401","SJAG_04398","SJAG_03486","SJAG_01084","SJAG_01888","SJAG_02923","SJAG_02989","SJAG_03444","SJAG_00145","SJAG_03340","SJAG_02222","SJAG_04312","SJAG_04026","SJAG_05000","SJAG_03067","SJAG_02379","SJAG_02651","SJAG_03048","SJAG_01254","SJAG_00990","SJAG_03081","SJAG_00113","SJAG_01017","SJAG_02432","SJAG_02286","SJAG_02878","SJAG_00664","SJAG_01993","SJAG_00210","SJAG_02592","SJAG_00810","SJAG_00667","SJAG_01919","SJAG_03735","SJAG_01699","SJAG_00472","SJAG_03209","SJAG_04723","SJAG_02700","SJAG_02773","SJAG_02730","SJAG_04394","SJAG_02472","SJAG_03623","SJAG_00256","SJAG_04936","SJAG_05153","SJAG_03802","SJAG_01311","SJAG_02737","SJAG_00975","SJAG_02380","SJAG_02444","SJAG_02921","SJAG_03501"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99549,106816,108057,108815,109142,114413,116623],"is_not":false,"summary":null,"term":"GO:0000747"},{"annotations":[99637,94394],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000755"},{"annotations":[113302,103876,95906,90963,110032,90139,102073,103877],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904541"},{"annotations":[100329],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0031141"},{"annotations":[117590],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0031142"},{"annotations":[108230,89885,118145,91081,118488,120248],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0010514"},{"annotations":[113451,118956,92868,89616,93265,101136,80425],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000742"},{"annotations":[94395,100201,90120,100813,100895,116322],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904600"},{"annotations":[118570,103552,61384,104297,106862,67142,90674,98298],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0031138"},{"annotations":[97060],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140538"},{"annotations":[102465,107761,117536,96255,107858,108453,110985,108607,90065,94809,108803,96113,116469,93288,103780,118072,106441],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010515"},{"annotations":[95204],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090029"},{"annotations":[89618,101150,78100,93266,99493],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000743"},{"annotations":[89695,95063],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0071432"},{"annotations":[98956,65812,98288,91103,108233,95205],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071507"},{"annotations":[72464],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0000750"},{"annotations":[98278,112170,97195,79564,94235],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032220"},{"annotations":[109095,102049,101360,103688,106864,113359,100467],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0031139"},{"annotations":[121124,121125,101417,89709,105297,109008,103321,102422,106381,110541,110777,118280],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900237"},{"annotations":[120058],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0031137"},{"annotations":[107471],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0000749"},{"annotations":[92725,117593,113352,108336],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0032005"}]},"cv_name":"biological_process","definition":"A conjugation process that results in the union of cellular and genetic information from compatible mating types. 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id: GO:0004856
data:
  {"annotated_genes":["SJAG_04276"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78934],"is_not":false,"summary":null,"term":"GO:0004856"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-xylulose + ATP = D-xylulose 5-phosphate + ADP + H+.","definition_xrefs":["EC:2.7.1.17","RHEA:10964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"D-xylulokinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R01639","MetaCyc:XYLULOKIN-RXN","Reactome:R-HSA-5662466"],"synonyms":[{"name":"ATP:D-xylulose 5-phosphotransferase activity","type":"related"},{"name":"xylulokinase (phosphorylating)","type":"related"},{"name":"xylulokinase activity","type":"broad"},{"name":"xylulose kinase activity","type":"related"}],"termid":"GO:0004856","terms_by_termid":{"GO:0004856":null}}


id: GO:0009214
data:
  {"annotated_genes":["SJAG_02481"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide catabolic process","termid":"GO:0009166"},{"relation_name":"is_a","term_name":"cyclic nucleotide metabolic process","termid":"GO:0009187"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"cyclic nucleotide catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cyclic nucleotide breakdown","type":"exact"},{"name":"cyclic nucleotide catabolism","type":"exact"},{"name":"cyclic nucleotide degradation","type":"exact"}],"termid":"GO:0009214","terms_by_termid":{"GO:0006198":null}}


id: FYPO:0000705
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another does not occur. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000702","FYPO:0000652"],"is_obsolete":false,"name":"abolished protein-protein interaction","synonyms":[{"name":"abolished protein binding","type":"exact"},{"name":"protein binding abolished","type":"exact"}],"termid":"FYPO:0000705"}


id: MONDO:0013510
data:
  {"annotated_genes":["SJAG_00757"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89147],"is_not":false,"summary":null,"term":"MONDO:0013510"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial melanoma","termid":"MONDO:0018961"},{"relation_name":"excluded_subClassOf","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"},{"relation_name":"is_a","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00757":null},"genotype_count":0,"is_obsolete":false,"name":"melanoma, cutaneous malignant, susceptibility to, 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:613972","UMLS:C3151417","MEDGEN:462767"],"synonyms":[{"name":"CMM6","type":"related"},{"name":"melanoma, cutaneous malignant, 6","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, 6","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, type 6","type":"exact"},{"name":"susceptibility to cutaneous malignant melanoma 6","type":"related"}],"termid":"MONDO:0013510","terms_by_termid":{"MONDO:0013510":null},"xrefs":{"Monarch":{"xref_id":"0013510"}}}


id: PBO:0051810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif and ubiquitin domain containing","termid":"PBO:0051810"}


id: MONDO:1010659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thrombocytopenia that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombocytopenia, non-human animal","termid":"MONDO:1010080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombocytopenia, dog","secondary_identifiers":["OMIA:001001-9615"],"termid":"MONDO:1010659","xrefs":{"Monarch":{"xref_id":"1010659"}}}


id: FYPO:0006357
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromatin remodeling, i.e. any dynamic structural change to chromatin, occurs to a lower extent than normal when the cell is subject to glucose starvation.","definition_xrefs":["GO:0006338","PMID:28674280","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"decreased chromatin remodeling during glucose starvation","synonyms":[{"name":"decreased chromatin modeling during glucose starvation","type":"exact"},{"name":"decreased chromatin remodeling during glucose depletion","type":"exact"},{"name":"decreased chromatin remodeling during glucose deprivation","type":"related"},{"name":"decreased chromatin remodeling during glucose limitation","type":"related"},{"name":"decreased chromatin remodelling during glucose starvation","type":"exact"},{"name":"reduced decreased chromatin remodeling during glucose starvation","type":"exact"}],"termid":"FYPO:0006357"}


id: SO:0000240
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A deviation in chromosome structure or number.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_collection","termid":"SO:0001507"},{"relation_name":"part_of","term_name":"chromosomally_aberrant_genome","termid":"SO:0001524"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome_variation","synonyms":[{"name":"chromosome variation","type":"exact"}],"termid":"SO:0000240"}


id: GO:0044645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that modulates the frequency, rate or extent of complement activation in a different organism.","definition_xrefs":["GOC:jl","PMID:20837040","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of complement activation in another organism (obsolete GO:0044645)","synonyms":[{"name":"modulation of complement activation in other organism","type":"exact"},{"name":"regulation of complement activation in other organism","type":"exact"}],"termid":"GO:0044645"}


id: PBO:0003302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn3","termid":"PBO:0003302"}


id: GO:0043537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the migration of the endothelial cells of blood vessels.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endothelial cell migration","termid":"GO:0010596"},{"relation_name":"is_a","term_name":"regulation of blood vessel endothelial cell migration","termid":"GO:0043535"},{"relation_name":"negatively_regulates","term_name":"blood vessel endothelial cell migration","termid":"GO:0043534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood vessel endothelial cell migration","synonyms":[{"name":"down regulation of blood vessel endothelial cell migration","type":"exact"},{"name":"down-regulation of blood vessel endothelial cell migration","type":"exact"},{"name":"downregulation of blood vessel endothelial cell migration","type":"exact"},{"name":"inhibition of blood vessel endothelial cell migration","type":"narrow"}],"termid":"GO:0043537"}


id: PBO:0030174
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_spheroid_vegetative_cell","termid":"PBO:0030174"}


id: GO:0008469
data:
  {"annotated_genes":["SJAG_00596"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77267],"is_not":false,"summary":null,"term":"GO:0008469"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (histone)-arginine = S-adenosyl-L-homocysteine + (histone)-N-methyl-arginine.","definition_xrefs":["PMID:8002954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine N-methyltransferase activity","termid":"GO:0016274"},{"relation_name":"is_a","term_name":"histone methyltransferase activity","termid":"GO:0042054"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00596":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0008276","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"histone arginine N-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0016276"],"synonyms":[{"name":"S-adenosyl-L-methionine:histone-arginine nomega-methyltransferase activity","type":"exact"},{"name":"S-adenosyl-L-methionine:histone-arginine omega-N-methyltransferase activity","type":"exact"},{"name":"histone-arginine N-methylase activity","type":"exact"},{"name":"histone-arginine N-methyltransferase activity","type":"exact"}],"termid":"GO:0008469","terms_by_termid":{"GO:0008469":null}}


id: PBO:0055084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2502","termid":"PBO:0055084"}


id: GO:0034247
data:
  {"annotated_genes":["SJAG_03112"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77264],"is_not":false,"summary":null,"term":"GO:0034247"}]},"cv_name":"biological_process","definition":"The process of removing sections of a primary snoRNA transcript to remove sequences not present in the mature form of the snoRNA and joining the remaining sections to form the mature form of the snoRNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing","termid":"GO:0008380"},{"relation_name":"is_a","term_name":"sno(s)RNA processing","termid":"GO:0043144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03112":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0016074","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"snoRNA splicing","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0034247","terms_by_termid":{"GO:0034247":null}}


id: GO:0071313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a caffeine stimulus. Caffeine is an alkaloid found in numerous plant species, where it acts as a natural pesticide that paralyzes and kills certain insects feeding upon them.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to caffeine","termid":"GO:0031000"},{"relation_name":"is_a","term_name":"cellular response to alkaloid","termid":"GO:0071312"},{"relation_name":"is_a","term_name":"cellular response to purine-containing compound","termid":"GO:0071415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to caffeine","termid":"GO:0071313"}


id: MONDO:0008766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amaurosis hypertrichosis is characterized by severe retinal dystrophy marked by visual impairment and profound photophobia without night blindness. Eye examination suggested a cone-rod type of congenital amaurosis. Trichomegaly, bushy eyebrows with synophyrys, and excessive facial and body hair were also reported. The syndrome has been described in two female cousins both born to consanguineous parents.","definition_xrefs":["Orphanet:1021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"amaurosis-hypertrichosis syndrome","secondary_identifiers":["MESH:C536604","SCTID:720983002","GARD:637","UMLS:C1857588","OMIM:204110","MEDGEN:341805","ICD10CM:H35.5"],"synonyms":[{"name":"amaurosis congenita cone-rod type with congenital hypertrichosis","type":"related"},{"name":"amaurosis congenita, cone-rod type, with congenital hypertrichosis","type":"related"}],"termid":"MONDO:0008766","xrefs":{"Monarch":{"xref_id":"0008766"}}}


id: PBO:0113245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein that binds the rDNA replication fork barrier site; required for replication fork blocking and recombinational hotspot activity that results in concerted evolution of the rDNA, termed homogenization; role in recruitment of condensin to the replication fork barrier (RFB), contributing to the faithful segregation of rDNA repeats; proposed role in recovery from low rDNA copy number; related to retroviral integrases","termid":"PBO:0113245"}


id: GO:0060510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a type II pneumocyte. A type II pneumocyte is a surfactant secreting cell that contains abundant cytoplasm containing numerous lipid-rich multilamellar bodies.","definition_xrefs":["GOC:dph","GOC:mtg_lung","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung secretory cell differentiation","termid":"GO:0061140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type II pneumocyte differentiation","synonyms":[{"name":"granular pneumocyte differentiation","type":"related"},{"name":"great alveolar cell differentiation","type":"exact"},{"name":"large alveolar cell differentiation","type":"related"}],"termid":"GO:0060510"}


id: GO:2001296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N(omega)-methyl-L-arginine.","definition_xrefs":["GOC:rs","PMID:10510241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"N(omega)-methyl-L-arginine metabolic process","synonyms":[{"name":"N(omega)-methyl-L-arginine metabolism","type":"exact"}],"termid":"GO:2001296"}


id: GO:2000156
data:
  {"annotated_genes":["SJAG_02419"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115616],"is_not":false,"summary":null,"term":"GO:2000156"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retrograde vesicle-mediated transport, Golgi to ER.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum","termid":"GO:0006890"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02419":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of retrograde vesicle-mediated transport, Golgi to ER","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cis-Golgi to rough ER transport","type":"exact"},{"name":"regulation of cis-Golgi to rough ER vesicle-mediated transport","type":"exact"},{"name":"regulation of cis-Golgi to rough endoplasmic reticulum transport","type":"exact"},{"name":"regulation of cis-Golgi to rough endoplasmic reticulum vesicle-mediated transport","type":"exact"},{"name":"regulation of retrograde (Golgi to ER) transport","type":"exact"},{"name":"regulation of retrograde transport, Golgi to ER","type":"exact"},{"name":"regulation of retrograde transport, Golgi to endoplasmic reticulum","type":"exact"},{"name":"regulation of retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum","type":"related"}],"termid":"GO:2000156","terms_by_termid":{"GO:2000156":null}}


id: GO:0070801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of conidiophore stalk development, a process that leads to the formation of a conidiophore stalk. The conidiophore stalk is part of a specialized hypha that extends aerially from the growth substrate and supports structures from which conidia, or asexual spores, develop.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of conidiophore development","termid":"GO:0070795"},{"relation_name":"is_a","term_name":"regulation of conidiophore stalk development","termid":"GO:0070799"},{"relation_name":"positively_regulates","term_name":"conidiophore stalk development","termid":"GO:0070788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of conidiophore stalk development","termid":"GO:0070801"}


id: PATO:0000666
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000666 energy_quantity (obsolete PATO:0000666)","termid":"PATO:0000666"}


id: PBO:0041450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 putative open reading frame 163","termid":"PBO:0041450"}


id: SO:0002035
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a lncRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA_primary_transcript","synonyms":[{"name":"lncRNA primary transcript","type":"exact"}],"termid":"SO:0002035"}


id: FYPO:0004653
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000032","FYPO:0001985","FYPO:0000631","FYPO:0004803","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of actomyosin contractile ring contraction","synonyms":[{"name":"delayed actomyosin contractile ring contraction","type":"exact"},{"name":"delayed onset of actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"delayed onset of actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"delayed onset of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"delayed onset of mitotic contractile ring contraction","type":"exact"},{"name":"increased dwell time before actomyosin contractile ring contraction","type":"exact"}],"termid":"FYPO:0004653"}


id: FYPO:0006304
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which F-actin forms a large spot in the medial region of the cell, instead of assembling into a contractile ring.","definition_xrefs":["PomBase:mah","PMID:9635188","PMID:19713940"],"direct_ancestors":[{"relation_name":"has_part","term_name":"actomyosin contractile ring absent","termid":"FYPO:0001008"},{"relation_name":"is_a","term_name":"actomyosin contractile ring absent","termid":"FYPO:0001008"},{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton during vegetative growth","termid":"FYPO:0002398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0004803","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"medial F-actin spot present","synonyms":[{"name":"actomyosin contractile ring absent, with medial F-actin spot present","type":"exact"},{"name":"medial F-actin spot present during mitotic cell cycle","type":"related"},{"name":"medial F-actin spot present during vegetative growth","type":"exact"}],"termid":"FYPO:0006304"}


id: GO:0010477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sulfur dioxide (SO2) stimulus.","definition_xrefs":["PMID:17425719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to sulfur dioxide","termid":"GO:0010477"}


id: MONDO:0022936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"de Hauwere Leroy adriaenssens syndrome","secondary_identifiers":["UMLS:C2931078","MEDGEN:419709","MESH:C535991"],"synonyms":[{"name":"iris dysplasia, orbital hypertelorism, and psychomotor retardation","type":"related"}],"termid":"MONDO:0022936","xrefs":{"Monarch":{"xref_id":"0022936"}}}


id: GO:0006846
data:
  {"annotated_genes":["SJAG_01505"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006847"}]},"cv_name":"biological_process","definition":"The directed movement of acetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01505":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"acetate transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006846","terms_by_termid":{"GO:0006847":null}}


id: PBO:0116394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular thiamine-repressible acid phosphatase Pho4","termid":"PBO:0116394"}


id: MONDO:0015215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A diaphragmatic or abdominal wall malformation that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic diaphragmatic or abdominal wall malformation (obsolete MONDO:0015215)","secondary_identifiers":["Orphanet:108977"],"synonyms":[{"name":"isolated diaphragmatic or abdominal wall malformation","type":"exact"},{"name":"nonsyndromic diaphragmatic or abdominal wall malformation","type":"exact"}],"termid":"MONDO:0015215","xrefs":{"Monarch":{"xref_id":"0015215"}}}


id: PBO:0005845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinephosphate cytidylyltransferase (predicted)","termid":"PBO:0005845"}


id: MONDO:0015978
data:
  {"annotated_genes":["SJAG_00739","SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009953"},{"annotations":[88550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044208"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte disorder","termid":"MONDO:0004805"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00739":null,"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"functional neutrophil defect","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:105600002","UMLS:C5924997","GARD:20321","icd11.foundation:808756909","Orphanet:183681","MEDGEN:1863601"],"synonyms":[{"name":"neutrophil disease","type":"exact"},{"name":"neutrophilopathy","type":"exact"}],"termid":"MONDO:0015978","terms_by_termid":{"MONDO:0009953":null,"MONDO:0044208":null},"xrefs":{"Monarch":{"xref_id":"0015978"}}}


id: GO:0008798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of a beta-linked aspartic residue from the N-terminus of a polypeptide.","definition_xrefs":["EC:3.4.19.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"omega peptidase activity","termid":"GO:0008242"},{"relation_name":"is_a","term_name":"threonine-type peptidase activity","termid":"GO:0070003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0003824","GO:0016787","GO:0008233"],"is_obsolete":false,"name":"beta-aspartyl-peptidase activity","secondary_identifiers":["Reactome:R-HSA-5692495","Reactome:R-HSA-5696365","MetaCyc:3.4.19.5-RXN"],"synonyms":[{"name":"beta-aspartyl dipeptidase activity","type":"related"},{"name":"beta-aspartyl peptidase activity","type":"related"}],"termid":"GO:0008798"}


id: GO:0047238
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucuronyl-N-acetyl-1,3-beta-D-galactosaminylproteoglycan + UDP-N-acetylgalactosamine = N-acetyl-D-galactosaminyl-1,4-beta-D-glucuronyl-N-acetyl-1,3-beta-D-galactosaminylproteoglycan + UDP.","definition_xrefs":["EC:2.4.1.175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-3595176","Reactome:R-HSA-9632033","MetaCyc:RXN-16325","Reactome:R-HSA-1971482","Reactome:R-HSA-1971487"],"synonyms":[{"name":"N-acetylgalactosaminyltransferase II activity","type":"exact"},{"name":"UDP-N-acetyl-D-galactosamine:D-glucuronyl-N-acetyl-1,3-beta-D-galactosaminylproteoglycan beta-1,4-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-galactosamine:beta-D-glucuronosyl-(1->3)-N-acetyl-beta-D-galactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"chondroitin synthase activity","type":"related"},{"name":"glucuronyl-N-acetylgalactosaminylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity","type":"exact"},{"name":"glucuronyl-N-acetylgalactosaminylproteoglycan beta-1,4-N-acetylgalactosaminyltransferase activity","type":"exact"},{"name":"uridine diphosphoacetylgalactosamine-chondroitin acetylgalactosaminyltransferase II activity","type":"related"}],"termid":"GO:0047238"}


id: PBO:0072048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 18","termid":"PBO:0072048"}


id: MONDO:0012148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete drug metabolism, poor, CYP2D6-related (obsolete MONDO:0012148)","secondary_identifiers":["OMIM:608902","MESH:C563835"],"synonyms":[{"name":"codeine sensitivity","type":"exact"},{"name":"codeine, ultrarapid metabolism of","type":"related"},{"name":"debrisoquine sensitivity","type":"exact"},{"name":"debrisoquine, poor metabolism of","type":"related"},{"name":"debrisoquine, ultrarapid metabolism of","type":"related"},{"name":"drug metabolism, poor, CYP2D6-related","type":"exact"},{"name":"drug metabolism, ultrarapid, CYP2D6-related","type":"related"},{"name":"nortriptyline, poor metabolism of","type":"related"},{"name":"sparteine, poor metabolism of","type":"related"}],"termid":"MONDO:0012148","xrefs":{"Monarch":{"xref_id":"0012148"}}}


id: FYPO:0006611
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a protein that is normally localized intermittently to the Cdr2 medial cortical node complex is associated with the complex less frequently than normal.","definition_xrefs":["PomBase:mah","PMID:29514920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intermittent protein localization to Cdr2 medial cortical node complex","termid":"FYPO:0006607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased frequency of protein localization to Cdr2 medial cortical node complex during intermittent localization to Cdr2 medial cortical node complex","synonyms":[{"name":"decreased frequency of bursts of intermittent protein localization to Cdr2 medial cortical node complex","type":"related"},{"name":"decreased frequency of protein localization bursts to Cdr2 medial cortical node complex","type":"related"},{"name":"decreased frequency of protein localization to Cdr2 medial cortical node complex during intermittent localization to Cdr2 medial cortical node complex during mitotic cell cycle","type":"related"},{"name":"decreased frequency of protein localization to Cdr2 medial cortical node complex during intermittent localization to Cdr2 medial cortical node complex during vegetative growth","type":"exact"},{"name":"decreased frequency of protein localization to Cdr2 medial cortical node complex during transient localization to Cdr2 medial cortical node complex","type":"exact"},{"name":"decreased frequency of protein visits to Cdr2 medial cortical node complex","type":"related"},{"name":"reduced frequency of protein localization to Cdr2 medial cortical node complex during intermittent localization to Cdr2 medial cortical node complex","type":"exact"}],"termid":"FYPO:0006611"}


id: GO:0017080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of a sodium channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion channel regulator activity","termid":"GO:0099106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674"],"is_obsolete":false,"name":"sodium channel regulator activity","termid":"GO:0017080"}


id: GO:0043314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of neutrophil degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte degranulation","termid":"GO:0043301"},{"relation_name":"is_a","term_name":"regulation of neutrophil degranulation","termid":"GO:0043313"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"neutrophil degranulation","termid":"GO:0043312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"negative regulation of neutrophil degranulation","synonyms":[{"name":"down regulation of neutrophil degranulation","type":"exact"},{"name":"down-regulation of neutrophil degranulation","type":"exact"},{"name":"downregulation of neutrophil degranulation","type":"exact"},{"name":"inhibition of neutrophil degranulation","type":"narrow"},{"name":"negative regulation of neutrophil granule exocytosis","type":"exact"}],"termid":"GO:0043314"}


id: MONDO:0002432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the vestibulocochlear nerve.","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant cranial nerve neoplasm","termid":"MONDO:0002433"},{"relation_name":"is_a","term_name":"auditory system cancer","termid":"MONDO:0004532"},{"relation_name":"is_a","term_name":"vestibulocochlear nerve neoplasm","termid":"MONDO:0021221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant neoplasm of acoustic nerve","secondary_identifiers":["DOID:2814","MEDGEN:83418","NCIT:C4539","SCTID:254980001","UMLS:C0346331"],"synonyms":[{"name":"cancer of the vestibulocochlear nerve","type":"exact"},{"name":"cancer of vestibulocochlear nerve","type":"exact"},{"name":"malignant acoustic nerve neoplasm","type":"exact"},{"name":"malignant acoustic nerve tumor","type":"exact"},{"name":"malignant acoustic nerve tumour","type":"exact"},{"name":"malignant eighth cranial nerve neoplasm","type":"exact"},{"name":"malignant eighth cranial nerve tumor","type":"exact"},{"name":"malignant eighth cranial nerve tumour","type":"exact"},{"name":"malignant neoplasm of eighth cranial nerve","type":"exact"},{"name":"malignant neoplasm of the acoustic nerve","type":"exact"},{"name":"malignant neoplasm of the eighth cranial nerve","type":"exact"},{"name":"malignant neoplasm of the vestibulocochlear nerve","type":"exact"},{"name":"malignant neoplasm of vestibulocochlear nerve","type":"exact"},{"name":"malignant tumor of acoustic nerve","type":"exact"},{"name":"malignant tumor of acoustic vestibular nerve","type":"exact"},{"name":"malignant tumor of eighth cranial nerve","type":"exact"},{"name":"malignant tumor of the acoustic nerve","type":"exact"},{"name":"malignant tumor of the eighth cranial nerve","type":"exact"},{"name":"malignant tumor of the vestibulocochlear nerve","type":"exact"},{"name":"malignant tumor of vestibulocochlear nerve","type":"exact"},{"name":"malignant tumour of acoustic nerve","type":"exact"},{"name":"malignant tumour of acoustic vestibular nerve","type":"exact"},{"name":"malignant tumour of eighth cranial nerve","type":"exact"},{"name":"malignant tumour of the acoustic nerve","type":"exact"},{"name":"malignant tumour of the eighth cranial nerve","type":"exact"},{"name":"malignant tumour of the vestibulocochlear nerve","type":"exact"},{"name":"malignant tumour of vestibulocochlear nerve","type":"exact"},{"name":"malignant vestibulocochlear nerve neoplasm","type":"exact"},{"name":"malignant vestibulocochlear nerve tumor","type":"exact"},{"name":"malignant vestibulocochlear nerve tumour","type":"exact"},{"name":"vestibulocochlear nerve cancer","type":"exact"}],"termid":"MONDO:0002432","xrefs":{"Monarch":{"xref_id":"0002432"}}}


id: MONDO:0012130
data:
  {"annotated_genes":["SJAG_02919","SJAG_03815","SJAG_04567"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88036,88037,88038],"is_not":false,"summary":null,"term":"MONDO:0012130"}]},"cv_name":"mondo","definition":"Any autosomal dominant distal myopathy in which the cause of the disease is a mutation in the CRYAB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant distal myopathy","termid":"MONDO:0016108"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02919":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0000426"],"is_obsolete":false,"name":"myofibrillar myopathy 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:608810","Orphanet:399058","GARD:17651","UMLS:C1837317","MEDGEN:324735","MESH:C563848","DOID:0080093"],"synonyms":[{"name":"CRYAB autosomal dominant distal myopathy","type":"exact"},{"name":"MFM2","type":"related"},{"name":"alpha-B crystallin-related late-onset distal myopathy","type":"related"},{"name":"alpha-B crystallinopathy","type":"exact"},{"name":"autosomal dominant distal myopathy caused by mutation in CRYAB","type":"exact"},{"name":"late-onset distal crystallinopathy","type":"exact"},{"name":"myofibrillar myopathy type 2","type":"exact"},{"name":"myopathy, desmin-related, associated with mutation in the Cryab Gene","type":"related"},{"name":"myopathy, myofibrillar, 2","type":"related"},{"name":"myopathy, myofibrillar, alpha-B crystallin-related","type":"related"},{"name":"myopathy, myofibrillar, type 2","type":"exact"},{"name":"myopathy, myofibrillar, with or without cataract and/or cardiomyopathy","type":"related"}],"termid":"MONDO:0012130","terms_by_termid":{"MONDO:0012130":null},"xrefs":{"Monarch":{"xref_id":"0012130"}}}


id: GO:0040016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The first few specialized divisions of an activated animal egg.","definition_xrefs":["GOC:clt","ISBN:0070524300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"},{"relation_name":"part_of","term_name":"embryo development","termid":"GO:0009790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic cleavage","termid":"GO:0040016"}


id: GO:1903473
data:
  {"annotated_genes":["SJAG_03936","SJAG_03631","SJAG_04776","SJAG_04597","SJAG_03581"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89385,96299,96476,112503,115355],"is_not":false,"summary":null,"term":"GO:1903473"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic actomyosin contractile ring contraction.","definition_xrefs":["PMID:1234","GOC:mtg_cell_cycle","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cytokinetic process","termid":"GO:1903438"},{"relation_name":"is_a","term_name":"regulation of mitotic actomyosin contractile ring contraction","termid":"GO:1903471"},{"relation_name":"positively_regulates","term_name":"mitotic actomyosin contractile ring contraction","termid":"GO:1902404"}],"gene_count":5,"genes_by_uniquename":{"SJAG_03581":null,"SJAG_03631":null,"SJAG_03936":null,"SJAG_04597":null,"SJAG_04776":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0000281"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0007049","GO:0000281"],"is_obsolete":false,"name":"positive regulation of mitotic actomyosin contractile ring contraction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"narrow"},{"name":"activation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"narrow"},{"name":"activation of mitotic actomyosin contractile ring contraction","type":"narrow"},{"name":"positive regulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of mitotic actomyosin contractile ring constriction","type":"exact"},{"name":"up regulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"up-regulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"upregulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of mitotic actomyosin contractile ring contraction","type":"exact"}],"termid":"GO:1903473","terms_by_termid":{"GO:1903473":null}}


id: FYPO:0007955
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which the rate or speed of microtubule polymerization, i.e. the additionl of tubulin dimers to a microtubule, is abnormal.","definition_xrefs":["PomBase:mlr","PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule polymerization during vegetative growth","termid":"FYPO:0004614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0005447"],"is_obsolete":false,"name":"abnormal rate of microtubule polymerization during vegetative growth","synonyms":[{"name":"abnormal rate of microtubule polymerisation during vegetative growth","type":"exact"}],"termid":"FYPO:0007955"}


id: MONDO:0012378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary gingival fibromatosis","termid":"MONDO:0016070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibromatosis, gingival, 3","secondary_identifiers":["UMLS:C1864960","OMIM:609955","GARD:9911","MEDGEN:351261","MESH:C537928"],"synonyms":[{"name":"GGF3","type":"related"},{"name":"GINGF3","type":"exact"},{"name":"HGF3","type":"related"},{"name":"fibromatosis gingival, hereditary, 3","type":"related"},{"name":"fibromatosis, gingival, 3","type":"exact"},{"name":"fibromatosis, gingival, hereditary, 3","type":"related"},{"name":"gingival fibromatosis, 3","type":"related"},{"name":"hereditary gingival fibromatosis, 3","type":"related"}],"termid":"MONDO:0012378","xrefs":{"Monarch":{"xref_id":"0012378"}}}


id: PR:Q9USK7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphopantothenate--cysteine ligase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12290:SF2","PRO:DNx","OMA:SCHPO04565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4B3.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.18","secondary_identifiers":["UniProtKB:Q9USK7"],"synonyms":[{"name":"Spom972h-PPCS","type":"exact"}],"termid":"PR:Q9USK7"}


id: FYPO:0002375
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein tyrosine phosphorylation during vegetative growth (obsolete FYPO:0002375)","synonyms":[{"name":"decreased peptidyl-tyrosine phosphorylation during vegetative growth","type":"exact"},{"name":"decreased protein tyrosine phosphorylation during mitotic cell cycle","type":"related"},{"name":"decreased tyrosine phosphorylation during vegetative growth","type":"exact"},{"name":"reduced protein tyrosine phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002375"}


id: FYPO:0000099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to canavanine. Cells stop growing (and may die) at a concentration of canavanine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0000003","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to canavanine","synonyms":[{"name":"hypersensitive to canavanine","type":"exact"},{"name":"sensitive to canavanine during mitotic cell cycle","type":"related"},{"name":"sensitive to canavanine during vegetative growth","type":"exact"}],"termid":"FYPO:0000099"}


id: MONDO:0012539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the TMEM67 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 6","secondary_identifiers":["MESH:C537689","OMIM:610688","GARD:15494","UMLS:C1853153","DOID:0111001","MEDGEN:342805"],"synonyms":[{"name":"JBTS6","type":"exact"},{"name":"Joubert syndrome 6","type":"exact"},{"name":"Joubert syndrome caused by mutation in TMEM67","type":"exact"},{"name":"Joubert syndrome type 6","type":"exact"},{"name":"TMEM67 Joubert syndrome","type":"exact"}],"termid":"MONDO:0012539","xrefs":{"Monarch":{"xref_id":"0012539"}}}


id: PBO:0058426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4796","termid":"PBO:0058426"}


id: MONDO:0016541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of secondary polycythemia that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired polycythemia","termid":"MONDO:0002438"},{"relation_name":"is_a","term_name":"secondary polycythemia","termid":"MONDO:0020115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acquired secondary polycythemia","secondary_identifiers":["Orphanet:238547","GARD:20636"],"synonyms":[{"name":"acquired secondary erythrocytosis","type":"exact"},{"name":"acquired secondary polycythemia","type":"exact"}],"termid":"MONDO:0016541","xrefs":{"Monarch":{"xref_id":"0016541"}}}


id: GO:0004039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 3 H+ + urea-1-carboxylate = 2 CO2 + 2 NH4.","definition_xrefs":["RHEA:19029","EC:3.5.1.54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"allophanate hydrolase activity","secondary_identifiers":["KEGG_REACTION:R00005","MetaCyc:ALLOPHANATE-HYDROLASE-RXN","UM-BBD_reactionID:r0848"],"synonyms":[{"name":"allophanate lyase activity","type":"related"},{"name":"urea-1-carboxylate amidohydrolase activity","type":"related"}],"termid":"GO:0004039"}


id: MONDO:0008760
data:
  {"annotated_genes":["SJAG_00413"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88873],"is_not":false,"summary":null,"term":"MONDO:0008760"}]},"cv_name":"mondo","definition":"Beta-ketothiolase (T2) deficiency is a rare organic aciduria affecting ketone body metabolism and the catabolism of isoleucine and characterized by intermittent ketoacidotic episodes associated with vomiting, dyspnea, tachypnoea, hypotonia, lethargy and coma, with an onset during infancy or toddlerhood and usually ceasing by adolescence.","definition_xrefs":["Orphanet:134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"},{"relation_name":"is_a","term_name":"inborn disorder of ketolysis","termid":"MONDO:0019229"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0002525","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"beta-ketothiolase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1536500","MEDGEN:280689","NANDO:2200493","GARD:872","DOID:14723","OMIM:203750","NANDO:1200987","NCIT:C98841","MESH:C535434"],"synonyms":[{"name":"2-Methyl-3-hydroxybutyric acidemia","type":"related"},{"name":"2-methyl-3-hydroxybutyricacidemia","type":"exact"},{"name":"3-Ktd deficiency","type":"related"},{"name":"3-ketothiolase deficiency","type":"exact"},{"name":"3-oxothiolase deficiency","type":"exact"},{"name":"ALPHA-methylacetoacetic aciduria","type":"related"},{"name":"Alpha methylacetoacetic aciduria","type":"exact"},{"name":"Alpha-methyl-acetoacetyl-CoA thiolase deficiency","type":"exact"},{"name":"BKT","type":"exact"},{"name":"Beta ketothiolase deficiency","type":"related"},{"name":"Mat deficiency","type":"related"},{"name":"T2 deficiency","type":"exact"},{"name":"alpha-methylacetoaceticaciduria","type":"exact"},{"name":"beta-ketothiolase deficiency","type":"exact"},{"name":"mitochondrial acetoacetyl-CoA thiolase deficiency","type":"exact"},{"name":"mitochondrial acetoacetyl-Coa thiolase deficiency","type":"related"},{"name":"mitochondrial acetoacetyl-coenzyme A thiolase deficiency","type":"exact"},{"name":"peroxisomal thiolase deficiency","type":"exact"}],"termid":"MONDO:0008760","terms_by_termid":{"MONDO:0008760":null},"xrefs":{"Monarch":{"xref_id":"0008760"}}}


id: PBO:0065182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein S (beta) pseudogene","termid":"PBO:0065182"}


id: PATO:0000437
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000437 sleep pattern value (obsolete PATO:0000437)","termid":"PATO:0000437"}


id: GO:0070455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of heme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heme biosynthetic process","termid":"GO:0070453"},{"relation_name":"is_a","term_name":"positive regulation of tetrapyrrole biosynthetic process","termid":"GO:1901465"},{"relation_name":"positively_regulates","term_name":"heme biosynthetic process","termid":"GO:0006783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"positively_regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"positive regulation of heme biosynthetic process","synonyms":[{"name":"activation of heme biosynthetic process","type":"narrow"},{"name":"positive regulation of haem biosynthetic process","type":"exact"},{"name":"positive regulation of heme anabolism","type":"exact"},{"name":"positive regulation of heme biosynthesis","type":"exact"},{"name":"positive regulation of heme formation","type":"exact"},{"name":"positive regulation of heme synthesis","type":"exact"},{"name":"stimulation of heme biosynthetic process","type":"narrow"},{"name":"up regulation of heme biosynthetic process","type":"exact"},{"name":"up-regulation of heme biosynthetic process","type":"exact"},{"name":"upregulation of heme biosynthetic process","type":"exact"}],"termid":"GO:0070455"}


id: PBO:0044114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen 1A","termid":"PBO:0044114"}


id: GO:0006566
data:
  {"annotated_genes":["SJAG_02450","SJAG_00881","SJAG_03152","SJAG_00234","SJAG_00432","SJAG_03141"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"},{"annotations":[65477,71421,78778,62028,113957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009088"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving threonine (2-amino-3-hydroxybutyric acid), a polar, uncharged, essential amino acid found in peptide linkage in proteins.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00234":null,"SJAG_00432":null,"SJAG_00881":null,"SJAG_02450":null,"SJAG_03141":null,"SJAG_03152":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"threonine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["UM-BBD_pathwayID:met"],"synonyms":[{"name":"methionine and threonine metabolic process","type":"broad"},{"name":"methionine and threonine metabolism","type":"broad"},{"name":"threonine metabolism","type":"exact"}],"termid":"GO:0006566","terms_by_termid":{"GO:0006567":null,"GO:0009088":null}}


id: PBO:0058416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4785","termid":"PBO:0058416"}


id: MONDO:1010853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease in which there is a buildup of glycogen due to a lack of the enzyme alpha-glucosidase in sheep.","definition_xrefs":["OMIA:000419-9940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease, non-human animal","termid":"MONDO:1011419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen storage disease II, sheep","termid":"MONDO:1010853","xrefs":{"Monarch":{"xref_id":"1010853"}}}


id: FYPO:0001415
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of sulfide:quinone oxidoreductase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal sulfide:quinone oxidoreductase activity","synonyms":[{"name":"abnormal sulfide-quinone reductase activity","type":"exact"},{"name":"abnormal sulfide:quinone reductase activity","type":"exact"},{"name":"abnormal sulphide:quinone oxidoreductase activity","type":"exact"}],"termid":"FYPO:0001415"}


id: GO:0018502
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-dichloro-2,5-cyclohexadiene-1,4-diol + NAD+ = NADH + H+ + 2,5-dichlorohydroquinone.","definition_xrefs":["UM-BBD_reactionID:r0553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase activity","secondary_identifiers":["MetaCyc:LINC-RXN","RHEA:15741"],"termid":"GO:0018502"}


id: PBO:0015676
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of MEi2","termid":"PBO:0015676"}


id: PR:O94622
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gmh6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized alpha-1,2-galactosyltransferase C1289.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.13c","synonyms":[{"name":"Spom972h-gmh6","type":"exact"}],"termid":"PR:O94622"}


id: PBO:0113405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of the cyclic AMP-dependent protein kinase (PKA); PKA is a component of a signaling pathway that controls a variety of cellular processes, including metabolism, cell cycle, stress response, stationary phase, and sporulation; regulator of meiotic commitment","termid":"PBO:0113405"}


id: PBO:0067346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 443, pseudogene","termid":"PBO:0067346"}


id: GO:0140958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a miRNA is targeted for degradation by a non-coding RNA or mRNA. The binding of an RNA to a target miRNA within a RISC complex results in either ubiquitin-mediated degradation of AGO protein or the displacement of the 3' end of the miRNA, exposing it to nucleases.","definition_xrefs":["PMID:33184237","PMID:36150386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA catabolic process","termid":"GO:0010587"},{"relation_name":"is_a","term_name":"post-transcriptional gene silencing","termid":"GO:0016441"},{"relation_name":"is_a","term_name":"negative regulation of miRNA-mediated gene silencing","termid":"GO:0060965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"target-directed miRNA degradation","synonyms":[{"name":"TDMD","type":"exact"},{"name":"target-directed microRNA degradation","type":"exact"}],"termid":"GO:0140958"}


id: PATO:0000655
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000655 amphetamine value (obsolete PATO:0000655)","termid":"PATO:0000655"}


id: MONDO:0012466
data:
  {"annotated_genes":["SJAG_00737","SJAG_03258"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89131,89132],"is_not":false,"summary":null,"term":"MONDO:0012466"}]},"cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing young-onset Parkinson disease, in which the cause of the disease is a mutation in the HTRA2 gene.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_03258":null},"genotype_count":0,"is_obsolete":false,"name":"Parkinson disease 13, autosomal dominant, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:343992","MESH:C565204","OMIM:610297","UMLS:C1853202"],"synonyms":[{"name":"HTRA2 young-onset Parkinson disease","type":"exact"},{"name":"PARK13","type":"exact"},{"name":"Parkinson disease 13","type":"exact"},{"name":"Parkinson disease 13, autosomal dominant, susceptibility to","type":"exact"},{"name":"young-onset Parkinson disease caused by mutation in HTRA2","type":"exact"}],"termid":"MONDO:0012466","terms_by_termid":{"MONDO:0012466":null},"xrefs":{"Monarch":{"xref_id":"0012466"}}}


id: GO:0051493
data:
  {"annotated_genes":["SJAG_02366","SJAG_02684","SJAG_03936","SJAG_04666","SJAG_03581","SJAG_03655","SJAG_01894","SJAG_03086","SJAG_02795","SJAG_04479","SJAG_01826","SJAG_01993","SJAG_01805","SJAG_03455","SJAG_04776","SJAG_03631","SJAG_03048","SJAG_01320","SJAG_04522","SJAG_04597","SJAG_03486","SJAG_01774","SJAG_02838","SJAG_00521","SJAG_02332","SJAG_04100","SJAG_00845","SJAG_02045","SJAG_05000","SJAG_00514","SJAG_01787","SJAG_04312","SJAG_00244","SJAG_00610","SJAG_01821","SJAG_02592","SJAG_00424","SJAG_00082","SJAG_04461","SJAG_00661","SJAG_04464","SJAG_02700","SJAG_00279","SJAG_02392","SJAG_02566","SJAG_03637","SJAG_00333"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77314,80924,94206,81977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[76270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"},{"annotations":[100188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000432"},{"annotations":[92640,105628,112744,96256,97754,104300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[103782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"},{"annotations":[91869,96298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[96476,115355,89385,112503,96299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[113422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[75056,118492,79706,104779,112081,75802,79599,101361,75087,117319,73457,80603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032956"},{"annotations":[109572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032231"},{"annotations":[78508,69535,68635,79152,81222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"},{"annotations":[107309,105636,115039,117320,93019,102106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070507"},{"annotations":[72474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031110"},{"annotations":[121595,95694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903499"},{"annotations":[73200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901673"},{"annotations":[117052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110162"},{"annotations":[91744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060236"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"cytoskeleton organization","termid":"GO:0007010"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00244":null,"SJAG_00279":null,"SJAG_00333":null,"SJAG_00424":null,"SJAG_00514":null,"SJAG_00521":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01320":null,"SJAG_01774":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_01821":null,"SJAG_01826":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02045":null,"SJAG_02332":null,"SJAG_02366":null,"SJAG_02392":null,"SJAG_02566":null,"SJAG_02592":null,"SJAG_02684":null,"SJAG_02700":null,"SJAG_02795":null,"SJAG_02838":null,"SJAG_03048":null,"SJAG_03086":null,"SJAG_03455":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03637":null,"SJAG_03655":null,"SJAG_03936":null,"SJAG_04100":null,"SJAG_04312":null,"SJAG_04461":null,"SJAG_04464":null,"SJAG_04479":null,"SJAG_04522":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010"],"is_obsolete":false,"name":"regulation of cytoskeleton organization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:32915139":null},"synonyms":[{"name":"regulation of cytoskeleton organisation","type":"exact"},{"name":"regulation of cytoskeleton organization and biogenesis","type":"related"}],"termid":"GO:0051493","terms_by_termid":{"GO:0030833":null,"GO:0031110":null,"GO:0031117":null,"GO:0032231":null,"GO:0032956":null,"GO:0034316":null,"GO:0051016":null,"GO:0060236":null,"GO:0070507":null,"GO:0110161":null,"GO:0110162":null,"GO:0120306":null,"GO:1901673":null,"GO:1903473":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:2000432":null}}


id: PBO:0109432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, human RNF13 family homolog","termid":"PBO:0109432"}


id: GO:0016837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from a polysaccharide.","definition_xrefs":["EC:4.2.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}


id: PATO:0005008
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 3-D shape inhering in a bearer by virtue of the bearer's having dentition characterized by low-crowned teeth. Human teeth are brachydont.","definition_xrefs":["DOI:10.1111/j.1469-185X.2011.00176.x"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-D shape","termid":"PATO:0002266"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydont","termid":"PATO:0005008"}


id: SO:0001782
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located within a transcription factor binding site.","definition_xrefs":["EBI:fc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region_variant","termid":"SO:0001566"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TF_binding_site_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"Jannovar:tf_binding_site_variant","type":"exact"},{"name":"TF binding site variant","type":"exact"},{"name":"VEP:TF_binding_site_variant","type":"exact"}],"termid":"SO:0001782"}


id: PATO:0001877
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being shaped like a lance-head, considerably longer than wide, tapering towards the tip from below the middle; attached at the broad end.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sharp","termid":"PATO:0001419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lanceolate","synonyms":[{"name":"spear-shaped","type":"exact"}],"termid":"PATO:0001877"}


id: MONDO:0001123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the sphenoid sinus that typically lasts beyond eight weeks. It is caused by infections, allergies, and the presence of sinus polyps or a deviated septum. Signs and symptoms include headache, nasal discharge, swelling in the face, dizziness, and breathing difficulties.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphenoid sinusitis","termid":"MONDO:0005964"},{"relation_name":"is_a","term_name":"chronic rhinosinusitis","termid":"MONDO:0006031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic sphenoidal sinusitis","secondary_identifiers":["ICD9:473.3","NCIT:C34480","icd11.foundation:627227610","MEDGEN:3087","ICD10CM:J32.3","UMLS:C0008712","DOID:10793","SCTID:38961000"],"synonyms":[{"name":"chronic sphenoid sinusitis","type":"exact"},{"name":"sphenoid sinusitis, chronic","type":"exact"},{"name":"sphenoidal sinus-chr.","type":"exact"}],"termid":"MONDO:0001123","xrefs":{"Monarch":{"xref_id":"0001123"}}}


id: PBO:0062545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily K member 1 pseudogene","termid":"PBO:0062545"}


id: PATO:0000686
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000686 absolute rate value (obsolete PATO:0000686)","termid":"PATO:0000686"}


id: PBO:0070141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 55 pseudogene","termid":"PBO:0070141"}


id: PBO:0080391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS25 pseudogene 1","termid":"PBO:0080391"}


id: PBO:0042675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 9","termid":"PBO:0042675"}


id: PBO:0059152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGUK p55 scaffold protein 4","termid":"PBO:0059152"}


id: GO:1903542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of exosomal secretion.","definition_xrefs":["GO_REF:0000058","PMID:24105262","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of exocytosis","termid":"GO:0045920"},{"relation_name":"is_a","term_name":"regulation of exosomal secretion","termid":"GO:1903541"},{"relation_name":"negatively_regulates","term_name":"exosomal secretion","termid":"GO:1990182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of exosomal secretion","synonyms":[{"name":"down regulation of exosomal protein secretion","type":"narrow"},{"name":"down regulation of exosomal secretion","type":"exact"},{"name":"down regulation of exosomal secretory pathway","type":"exact"},{"name":"down regulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"down regulation of secretion of exosome","type":"exact"},{"name":"down-regulation of exosomal protein secretion","type":"narrow"},{"name":"down-regulation of exosomal secretion","type":"exact"},{"name":"down-regulation of exosomal secretory pathway","type":"exact"},{"name":"down-regulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"down-regulation of secretion of exosome","type":"exact"},{"name":"downregulation of exosomal protein secretion","type":"narrow"},{"name":"downregulation of exosomal secretion","type":"exact"},{"name":"downregulation of exosomal secretory pathway","type":"exact"},{"name":"downregulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"downregulation of secretion of exosome","type":"exact"},{"name":"inhibition of exosomal protein secretion","type":"narrow"},{"name":"inhibition of exosomal secretion","type":"narrow"},{"name":"inhibition of exosomal secretory pathway","type":"narrow"},{"name":"inhibition of extracellular vesicular exosome secretion","type":"narrow"},{"name":"inhibition of secretion of exosome","type":"narrow"},{"name":"negative regulation of exosomal protein secretion","type":"narrow"},{"name":"negative regulation of exosomal secretory pathway","type":"exact"},{"name":"negative regulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"negative regulation of secretion of exosome","type":"exact"}],"termid":"GO:1903542"}


id: MONDO:0971080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Grisel syndrome","secondary_identifiers":["Orphanet:662255","UMLS:C0263885","MEDGEN:538169"],"termid":"MONDO:0971080","xrefs":{"Monarch":{"xref_id":"0971080"}}}


id: GO:1905917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell differentiation involved in phenotypic switching.","definition_xrefs":["GO_REF:0000058","GOC:BHF_miRNA","GOC:TermGenie","GOC:rph","GOC:BHF","PMID:25089138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of cell differentiation involved in phenotypic switching","termid":"GO:1905915"},{"relation_name":"positively_regulates","term_name":"cell differentiation involved in phenotypic switching","termid":"GO:0090679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell differentiation involved in phenotypic switching","synonyms":[{"name":"activation of cell differentiation involved in phenotypic switching","type":"narrow"},{"name":"up regulation of cell differentiation involved in phenotypic switching","type":"exact"},{"name":"up-regulation of cell differentiation involved in phenotypic switching","type":"exact"},{"name":"upregulation of cell differentiation involved in phenotypic switching","type":"exact"}],"termid":"GO:1905917"}


id: PBO:0076209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 19","termid":"PBO:0076209"}


id: MONDO:0010832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Bardet-Biedl syndrome","termid":"MONDO:0015229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Bardet-Biedl syndrome 3","secondary_identifiers":["DOID:0110125","OMIM:600151","MEDGEN:347179","MESH:C537911","UMLS:C1859564","GARD:822"],"synonyms":[{"name":"BBS3","type":"exact"},{"name":"Bardet-Biedl syndrome 3","type":"exact"},{"name":"Bardet-Biedl syndrome type 3","type":"exact"}],"termid":"MONDO:0010832","xrefs":{"Monarch":{"xref_id":"0010832"}}}


id: GO:2000294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of defecation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"is_a","term_name":"regulation of defecation","termid":"GO:2000292"},{"relation_name":"positively_regulates","term_name":"defecation","termid":"GO:0030421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of defecation","termid":"GO:2000294"}


id: SO:1000031
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal structure variation whereby more than one chromosome is involved.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"interchromosomal","termid":"SO:0001511"},{"relation_name":"is_a","term_name":"chromosome_structure_variation","termid":"SO:1000183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interchromosomal_mutation","synonyms":[{"name":"interchromosomal mutation","type":"exact"}],"termid":"SO:1000031"}


id: MONDO:0006190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive epithelial neoplasm arising from the temporal bone. It is characterized by the presence of a papillary pattern, and has been described as an adenoma or carcinoma in the literature. There is disagreement regarding its relationship to endolymphatic sac tumor.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary epithelial neoplasm","termid":"MONDO:0021096"},{"relation_name":"is_a","term_name":"inner ear neoplasm","termid":"MONDO:0024320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endolymphatic sac tumor","secondary_identifiers":["ICDO:8260/1","HP:0030393","SCTID:699817008","NCIT:C67560","UMLS:C2348239","EFO:1000230","ICD9:212.0","MEDGEN:389657"],"synonyms":[{"name":"ELST","type":"exact"},{"name":"aggressive papillary tumor of the temporal bone","type":"exact"},{"name":"aggressive papillary tumour of the temporal bone","type":"exact"},{"name":"endolymphatic sac neoplasm","type":"exact"},{"name":"endolymphatic sac neoplasm (disease)","type":"exact"},{"name":"endolymphatic sac tumor","type":"exact"},{"name":"endolymphatic sac tumor (disease)","type":"exact"},{"name":"endolymphatic sac tumour (disease)","type":"exact"},{"name":"neoplasm of endolymphatic sac","type":"exact"},{"name":"tumor of endolymphatic sac","type":"exact"},{"name":"tumour of endolymphatic sac","type":"exact"}],"termid":"MONDO:0006190","xrefs":{"Monarch":{"xref_id":"0006190"}}}


id: PBO:0059680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 46","termid":"PBO:0059680"}


id: PBO:0036542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notchless-like ribosome biogenesis protein Rsa4 (predicted)","termid":"PBO:0036542"}


id: PBO:0050556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HR lysine demethylase and nuclear receptor corepressor","termid":"PBO:0050556"}


id: PBO:0064777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphoinositol pentakisphosphate kinase 2","termid":"PBO:0064777"}


id: GO:1900309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maltoheptaose metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"regulates","term_name":"maltoheptaose metabolic process","termid":"GO:2001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of maltoheptaose metabolic process","synonyms":[{"name":"regulation of maltoheptaose metabolism","type":"exact"}],"termid":"GO:1900309"}


id: PBO:0014245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BET family double bromodomain protein Brf2","termid":"PBO:0014245"}


id: GO:0030220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which platelets bud from long processes extended by megakaryocytes.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell differentiation","termid":"GO:0030099"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"platelet morphogenesis","termid":"GO:0036344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"platelet formation","synonyms":[{"name":"platelet extrusion","type":"exact"}],"termid":"GO:0030220"}


id: PBO:0056786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microfibril associated protein 3","termid":"PBO:0056786"}


id: SO:0000323
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The first base to be translated into protein.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_region","termid":"SO:0000851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_start","synonyms":[{"name":"coding start","type":"exact"},{"name":"translation initiation site","type":"exact"},{"name":"translation start","type":"related"}],"termid":"SO:0000323"}


id: GO:0004313
data:
  {"annotated_genes":["SJAG_04107"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60285],"is_not":false,"summary":null,"term":"GO:0004313"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + [acyl-carrier protein] = CoA + acetyl-[acyl-carrier protein].","definition_xrefs":["RHEA:41788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acetyltransferase activity","termid":"GO:0016418"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04107":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"[acyl-carrier-protein] S-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:2.3.1.38","MetaCyc:ACP-S-ACETYLTRANSFER-RXN"],"synonyms":[{"name":"ACAT activity","type":"broad"},{"name":"ACP S-acetyltransferase activity","type":"exact"},{"name":"ACP acetyltransferase activity","type":"related"},{"name":"ACPacetyltransferase activity","type":"related"},{"name":"[acyl-carrier protein] S-acetyltransferase activity","type":"exact"},{"name":"acetyl coenzyme A-acyl-carrier-protein transacylase activity","type":"related"},{"name":"acetyl-CoA:acyl-carrier-protein S-acetyltransferase activity","type":"related"},{"name":"acyl-carrier-protein S-acetyltransferase activity","type":"related"},{"name":"acyl-carrier-protein acetyltransferase activity","type":"related"},{"name":"acyl-carrier-proteinacetyltransferase activity","type":"related"}],"termid":"GO:0004313","terms_by_termid":{"GO:0004313":null}}


id: MONDO:0016696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade III oligodendroglioma with focal or diffuse malignant morphologic features (prominent nuclear pleomorphism, mitoses, and increased cellularity).","definition_xrefs":["NCIT:C4326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligodendroglial tumor","termid":"MONDO:0018744"},{"relation_name":"is_a","term_name":"anaplastic cancer","termid":"MONDO:0020633"},{"relation_name":"is_a","term_name":"grade III glioma","termid":"MONDO:0021640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"anaplastic oligodendroglioma","secondary_identifiers":["ONCOTREE:AODG","DOID:7154","MedDRA:10026659","EFO:0002501","GARD:9472","UMLS:C0334590","MEDGEN:90812","Orphanet:251630","ICDO:9451/3"],"synonyms":[{"name":"WHO grade III oligodendroglial neoplasm","type":"exact"},{"name":"WHO grade III oligodendroglial tumor","type":"exact"},{"name":"WHO grade III oligodendroglial tumour","type":"exact"},{"name":"anaplastic oligodendroglioma","type":"exact"},{"name":"malignant oligodendroglioma","type":"exact"},{"name":"oligodendroglioma, anaplastic, malignant","type":"exact"},{"name":"oligodendroglioma, malignant","type":"exact"},{"name":"undifferentiated oligodendroglioma","type":"exact"}],"termid":"MONDO:0016696","xrefs":{"Monarch":{"xref_id":"0016696"}}}


id: GO:1900823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ergot alkaloid biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of ergot alkaloid biosynthetic process","termid":"GO:1900822"},{"relation_name":"negatively_regulates","term_name":"ergot alkaloid biosynthetic process","termid":"GO:0035837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of ergot alkaloid biosynthetic process","synonyms":[{"name":"down regulation of ergot alkaloid anabolism","type":"exact"},{"name":"down regulation of ergot alkaloid biosynthesis","type":"exact"},{"name":"down regulation of ergot alkaloid biosynthetic process","type":"exact"},{"name":"down regulation of ergot alkaloid formation","type":"exact"},{"name":"down regulation of ergot alkaloid synthesis","type":"exact"},{"name":"down-regulation of ergot alkaloid anabolism","type":"exact"},{"name":"down-regulation of ergot alkaloid biosynthesis","type":"exact"},{"name":"down-regulation of ergot alkaloid biosynthetic process","type":"exact"},{"name":"down-regulation of ergot alkaloid formation","type":"exact"},{"name":"down-regulation of ergot alkaloid synthesis","type":"exact"},{"name":"downregulation of ergot alkaloid anabolism","type":"exact"},{"name":"downregulation of ergot alkaloid biosynthesis","type":"exact"},{"name":"downregulation of ergot alkaloid biosynthetic process","type":"exact"},{"name":"downregulation of ergot alkaloid formation","type":"exact"},{"name":"downregulation of ergot alkaloid synthesis","type":"exact"},{"name":"inhibition of ergot alkaloid anabolism","type":"exact"},{"name":"inhibition of ergot alkaloid biosynthesis","type":"exact"},{"name":"inhibition of ergot alkaloid biosynthetic process","type":"narrow"},{"name":"inhibition of ergot alkaloid formation","type":"exact"},{"name":"inhibition of ergot alkaloid synthesis","type":"exact"},{"name":"negative regulation of ergot alkaloid anabolism","type":"exact"},{"name":"negative regulation of ergot alkaloid biosynthesis","type":"exact"},{"name":"negative regulation of ergot alkaloid formation","type":"exact"},{"name":"negative regulation of ergot alkaloid synthesis","type":"exact"}],"termid":"GO:1900823"}


id: MOD:00867
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-cysteine converted to an L-selenocysteine residue to form L-cysteinyl-L-selenocystine.","definition_xrefs":["PubMed:17177418","PubMed:10801974","RESID:AA0358#CYS","PubMed:12911312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenium substitution for sulfur","termid":"MOD:00007"},{"relation_name":"is_a","term_name":"L-cysteinyl-L-selenocysteine","termid":"MOD:01627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteinyl-L-selenocysteine (Cys-Cys)","synonyms":[{"name":"(R,R)-2-amino-3-[3-(2-aminopropanoic acid)sulfanyl]selanylpropanoic acid","type":"exact"},{"name":"CROSSLNK Cysteinyl-selenocysteine (Cys-Sec)","type":"exact"},{"name":"CROSSLNK Cysteinyl-selenocysteine (Sec-Cys)","type":"exact"},{"name":"L-cysteinyl-L-selenocysteine","type":"exact"}],"termid":"MOD:00867"}


id: PBO:0086438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative K+/H+ antiporter; involved in intracellular cation homeostasis; promotes copper binding to Fet3p multicopper oxidase; localized to Golgi vesicles and detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086438"}


id: PBO:0073030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secernin 3","termid":"PBO:0073030"}


id: MONDO:0700200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subset of SLC6A3-related DTDS cases which have later onset which ranges from late childhood to adulthood. This disorder is characterized by the presentation of parkinsonism-dystonia, rigidity, tremor, and bradykinesia after normal childhood development.","definition_xrefs":["PMID:28749637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SLC6A3-related dopamine transporter deficiency syndrome","termid":"MONDO:0700117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical dopamine transporter deficiency syndrome","secondary_identifiers":["DOID:0070488"],"synonyms":[{"name":"atypical DTDS","type":"exact"}],"termid":"MONDO:0700200","xrefs":{"Monarch":{"xref_id":"0700200"}}}


id: PBO:0056495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 3","termid":"PBO:0056495"}


id: GO:0001743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial developmental process that will lead to the formation of an eye.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal placode formation","termid":"GO:0060788"},{"relation_name":"part_of","term_name":"embryonic morphogenesis","termid":"GO:0048598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens placode formation","synonyms":[{"name":"optic placode formation","type":"related"}],"termid":"GO:0001743"}


id: PBO:0052181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 13","termid":"PBO:0052181"}


id: MONDO:0014880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Duane syndrome type 3 is a disorder of eye movement.The affected eye, or eyes, has limited ability to move both inward toward the nose and outward toward the ears. The eye opening narrows and the eyeball pulls in when looking inward toward the nose. About 15 percent of all cases of Duane syndrome are type 3. Most cases occur without other signs and symptoms.In most people with Duane syndrome type 3, the cause is unknown; but it can sometimes be caused by mutations in the CHN1 gene and inherited in an autosomal dominant fashion.","definition_xrefs":["GARD:0010691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Duane retraction syndrome","termid":"MONDO:0007473"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Duane retraction syndrome 3 with or without deafness","secondary_identifiers":["OMIM:617041","UMLS:C4310752","GARD:10691","MEDGEN:934719"],"synonyms":[{"name":"DURS3","type":"exact"},{"name":"Duane retraction syndrome 3","type":"related"},{"name":"Duane retraction syndrome 3 with or without deafness","type":"exact"},{"name":"Duane retraction syndrome caused by mutation in MAFB","type":"exact"},{"name":"Duane syndrome type 3","type":"related"},{"name":"MAFB Duane retraction syndrome","type":"exact"}],"termid":"MONDO:0014880","xrefs":{"Monarch":{"xref_id":"0014880"}}}


id: PBO:0042767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 68","termid":"PBO:0042767"}


id: PBO:0047010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A13, pseudogene","termid":"PBO:0047010"}


id: PBO:0042984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHD9 neighbor","termid":"PBO:0042984"}


id: SOFP:Note
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"A GFF3 Note attribute","definition_xrefs":["so:sjc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Note","termid":"SOFP:Note"}


id: FYPO:0007800
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum is abolished, and some of the protein is present at the cell surface instead.","definition_xrefs":["PomBase:mah","PMID:33536395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0003777"},{"relation_name":"is_a","term_name":"protein mislocalized to cell surface during vegetative growth","termid":"FYPO:0007799"},{"relation_name":"is_a","term_name":"abolished protein localization to endoplasmic reticulum","termid":"FYPO:0008405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to endoplasmic reticulum, with protein mislocalized to cell surface","synonyms":[{"name":"abolished luminal ER protein retention","type":"exact"},{"name":"abolished protein localization to ER, with protein mislocalized to cell surface","type":"exact"},{"name":"abolished protein localization to endoplasmic reticulum, with protein mislocalized to cell surface during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to endoplasmic reticulum, with protein mislocalized to cell surface during vegetative growth","type":"exact"}],"termid":"FYPO:0007800"}


id: PBO:0049542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 6","termid":"PBO:0049542"}


id: MONDO:0020126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare peripheral neuropathy.","gene_count":0,"genotype_count":0,"name":"obsolete rare peripheral neuropathy (obsolete MONDO:0020126)","secondary_identifiers":["Orphanet:98496"],"synonyms":[{"name":"rare peripheral neuropathy","type":"exact"}],"termid":"MONDO:0020126","xrefs":{"Monarch":{"xref_id":"0020126"}}}


id: PBO:0061321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member A8","termid":"PBO:0061321"}


id: MONDO:0001722
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive peripheral pterygium","termid":"MONDO:0001723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"central pterygium","secondary_identifiers":["UMLS:C0155156","DOID:13473","MEDGEN:509816","ICD9:372.43","SCTID:43300008"],"termid":"MONDO:0001722","xrefs":{"Monarch":{"xref_id":"0001722"}}}


id: GO:0008679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-glycerate + NADP+ = 2-hydroxy-3-oxopropanoate + NADPH + H+.","definition_xrefs":["EC:1.1.1.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-hydroxy-3-oxopropionate reductase activity","secondary_identifiers":["MetaCyc:TSA-REDUCT-RXN"],"synonyms":[{"name":"(R)-glycerate:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"tartronate semialdehyde reductase (NADPH) activity","type":"related"}],"termid":"GO:0008679"}


id: GO:0044560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism alters or subverts the activity of an ion channel in another organism via the action of a venom.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of biological process","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated perturbation of ion channel activity","synonyms":[{"name":"envenomation resulting in modulation of ion channel activity in another organism","type":"exact"},{"name":"envenomation resulting in modulation of ion channel activity in other organism","type":"exact"},{"name":"envenomation resulting in regulation of ion channel activity in other organism","type":"exact"}],"termid":"GO:0044560"}


id: PBO:0077576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and immunoglobulin domain containing 1","termid":"PBO:0077576"}


id: PATO:0001321
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angle which is 90 degrees to another entity.","definition_xrefs":["thesaurus.math:thesaurus.math"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"right angle to","termid":"PATO:0001321"}


id: PATO:0002189
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The ease of distortion of the electron cloud of a molecular entity by an electric field.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electric polarizability","termid":"PATO:0002189"}


id: PBO:0045736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"estrogen receptor binding site associated antigen 9","termid":"PBO:0045736"}


id: MOD:00478
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to L-glutamyl semialdehyde.","definition_xrefs":["Unimod:35#P","PubMed:2563380","DeltaMass:354","PubMed:11120890","PubMed:9252331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"},{"relation_name":"is_a","term_name":"glutamyl semialdehyde","termid":"MOD:01440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamyl semialdehyde (Pro)","synonyms":[{"name":"Oxidation","type":"related"},{"name":"Oxidation of proline to gamma-glutamyl semialdehyde","type":"exact"},{"name":"Oxidation or Hydroxylation","type":"related"},{"name":"gamma-glutamyl semialdehyde","type":"exact"},{"name":"glutamyl 5-semialdehyde","type":"exact"},{"name":"glutamyl aldehyde","type":"exact"}],"termid":"MOD:00478"}


id: GO:2000788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of venous endothelial cell fate commitment.","definition_xrefs":["PMID:11585794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate commitment","termid":"GO:0010454"},{"relation_name":"is_a","term_name":"negative regulation of blood vessel endothelial cell differentiation","termid":"GO:0110059"},{"relation_name":"is_a","term_name":"regulation of venous endothelial cell fate commitment","termid":"GO:2000787"},{"relation_name":"negatively_regulates","term_name":"venous endothelial cell fate commitment","termid":"GO:0060845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of venous endothelial cell fate commitment","termid":"GO:2000788"}


id: MONDO:0000611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease of cellular proliferation that results in abnormal growths in the body, which do not invade or destroy the surrounding tissue but, given enough time, will transform into a cancer.","definition_xrefs":["DOID:0060071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"},{"relation_name":"is_a","term_name":"precancerous condition","termid":"MONDO:0021074"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-malignant neoplasm","secondary_identifiers":["MEDGEN:1837212","UMLS:C5817154"],"termid":"MONDO:0000611","xrefs":{"Monarch":{"xref_id":"0000611"}}}


id: MONDO:0010091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Crisponi syndrome (CS) is a severe disorder characterized by muscular contractions at birth, intermittent hyperthermia, facial abnormalities and camptodactyly.","definition_xrefs":["Orphanet:1545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cold-induced sweating syndrome","termid":"MONDO:0015526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Cold-induced sweating syndrome 1","secondary_identifiers":["UMLS:C1848947","GARD:1611","DOID:0080329","MEDGEN:338577","MESH:C536214","SCTID:725097006","OMIM:272430","OMIM:601378"],"synonyms":[{"name":"CISS1","type":"related"},{"name":"CRISPONI/cold-induced sweating syndrome 1","type":"related"},{"name":"Crisponi syndrome","type":"exact"},{"name":"Crisponi/cold-induced sweating syndrome 1","type":"related"},{"name":"Sohar-Crisponi syndrome","type":"related"},{"name":"cold-induced sweating syndrome 1","type":"related"},{"name":"cold-induced sweating syndrome type 1","type":"exact"},{"name":"muscle contractions, Tetanoform, with characteristic face, camptodactyly, hyperthermia, and sudden death","type":"related"}],"termid":"MONDO:0010091","xrefs":{"Monarch":{"xref_id":"0010091"}}}


id: PBO:0004121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GTPase involved in translation Mtg1 (predicted)","termid":"PBO:0004121"}


id: PBO:0091810
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Required for Stationary phase Viability","termid":"PBO:0091810"}


id: MONDO:0015327
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 16, pseudogene","termid":"PBO:0068636"}


id: GO:0006882
data:
  {"annotated_genes":["SJAG_02080","SJAG_00668","SJAG_00328","SJAG_02847","SJAG_00222","SJAG_04185","SJAG_03528","SJAG_01078","SJAG_04584","SJAG_01803","SJAG_01990","SJAG_00923"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74561,75944,76507,77678,78968,80090,96619,102083,105507,106108,106248,116342],"is_not":false,"summary":null,"term":"GO:0006882"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of zinc ions within a cell.","definition_xrefs":["GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00222":null,"SJAG_00328":null,"SJAG_00668":null,"SJAG_00923":null,"SJAG_01078":null,"SJAG_01803":null,"SJAG_01990":null,"SJAG_02080":null,"SJAG_02847":null,"SJAG_03528":null,"SJAG_04185":null,"SJAG_04584":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"intracellular zinc ion homeostasis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cellular zinc ion homeostasis","type":"exact"},{"name":"zinc homeostasis","type":"broad"}],"termid":"GO:0006882","terms_by_termid":{"GO:0006882":null}}


id: MONDO:1010085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Factor XIII deficiency that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"factor XIII deficiency, non-human animal","secondary_identifiers":["OMIA:001818"],"termid":"MONDO:1010085","xrefs":{"Monarch":{"xref_id":"1010085"}}}


id: PBO:0062617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily W member 1","termid":"PBO:0062617"}


id: PBO:0084818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; similar to Ups1p and Ups2p which are involved in regulation of mitochondrial cardiolipin and phosphatidylethanolamine levels; null is viable but interacts synthetically with ups1 and ups2 mutations; UPS3 has a paralog, UPS2, that arose from the whole genome duplication","termid":"PBO:0084818"}


id: MONDO:0100482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of drug-resistant tuberculosis that is resistant to any fluoroquinolone, and at least one of three second-line injectable drugs (capreomycin, kanamycin, and amikacin), in addition to resistance to rifampicin and isoniazid.","definition_xrefs":["PMID:25918181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"drug-resistant tuberculosis","termid":"MONDO:0041806"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extensively drug-resistant tuberculosis","secondary_identifiers":["MEDGEN:321809","NCIT:C128417","MESH:D054908","UMLS:C1827301"],"synonyms":[{"name":"XDR-TB","type":"exact"}],"termid":"MONDO:0100482","xrefs":{"Monarch":{"xref_id":"0100482"}}}


id: FYPO:0000411
data:
  {"alleles_by_uniquename":{"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001007"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic cell cycle progression is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cell cycle","termid":"FYPO:0003832"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04883":null},"genotype_count":1,"genotypes_by_uniquename":{"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic cell cycle","references_by_uniquename":{"PMID:36695178":null},"single_locus_annotated_genes":["SJAG_04883"],"single_locus_genotype_uniquenames":["ptp4delta"],"synonyms":[{"name":"mitotic cell cycle progression: normal","type":"related"},{"name":"normal cell cycle during mitotic cell cycle","type":"related"},{"name":"normal cell cycle during vegetative growth","type":"exact"},{"name":"normal mitotic cell cycle progression","type":"exact"},{"name":"normal mitotic cell-division cycle","type":"exact"}],"termid":"FYPO:0000411","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0001007":null}}


id: GO:0071622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of granulocyte chemotaxis. Granulocyte chemotaxis is the movement of a granulocyte in response to an external stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte chemotaxis","termid":"GO:0002688"},{"relation_name":"regulates","term_name":"granulocyte chemotaxis","termid":"GO:0071621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of granulocyte chemotaxis","termid":"GO:0071622"}


id: MONDO:0019890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-distal trisomy 9q is a rare chromosomal anomaly syndrome, resulting from the partial trisomy of the long arm of chromosome 9, with a highly variable phenotype principally characterized by developmental delay, short stature, intellectual disability, and craniofacial dysmorphism (e.g. microcephaly, broad forehead, low set ears, epicanthus, prominent nose, and retrognathia). Cardiac, ocular, thyroid and esophagus defects, as well as central nervous system and behavioral/psychiatric abnormalities, have also been reported.","definition_xrefs":["Orphanet:96112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial trisomy of the long arm of chromosome 9","termid":"MONDO:0016960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-distal trisomy 9q","secondary_identifiers":["GARD:19323","UMLS:C4707261","MEDGEN:1631139","SCTID:764997000"],"synonyms":[{"name":"non-distal duplication 9q","type":"exact"},{"name":"non-distal trisomy type 9q","type":"exact"},{"name":"non-telomeric trisomy 9q","type":"exact"}],"termid":"MONDO:0019890","xrefs":{"Monarch":{"xref_id":"0019890"}}}


id: PBO:0060581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 18, pseudogene","termid":"PBO:0060581"}


id: PBO:0061270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH oxidase 1","termid":"PBO:0061270"}


id: PBO:0087997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-SNARE protein required for secretory vesicle-plasma membrane fusion; similar to but not functionally redundant with Spo20p; interacts non-exocyst bound Sec6p; SNAP-25 homolog","termid":"PBO:0087997"}


id: PBO:0065543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreas associated transcription factor 1a","termid":"PBO:0065543"}


id: PBO:0036366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial thioredoxin family protein","termid":"PBO:0036366"}


id: PBO:0029185
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_trehalose_6-phosphate_level","termid":"PBO:0029185"}


id: MONDO:0007405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Crouzon disease is characterized by craniosynostosis and facial hypoplasia.","definition_xrefs":["Orphanet:207"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Crouzon syndrome","secondary_identifiers":["icd11.foundation:1535725821","DOID:2339","MESH:D003394","NCIT:C84653","MEDGEN:1162","NORD:1018","NANDO:2200845","SCTID:28861008","NANDO:1200666","OMIM:123500","UMLS:C0010273","GARD:6206"],"synonyms":[{"name":"Cfd1","type":"related"},{"name":"Crouzon craniofacial dysostosis","type":"exact"},{"name":"Crouzon disease","type":"related"},{"name":"Crouzon syndrome","type":"exact"},{"name":"Crouzon's disease","type":"related"},{"name":"craniofacial dysostosis","type":"exact"},{"name":"craniofacial dysostosis type 1","type":"related"},{"name":"craniofacial dysostosis, type 1","type":"related"}],"termid":"MONDO:0007405","xrefs":{"Monarch":{"xref_id":"0007405"}}}


id: PBO:0079404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 7 pseudogene","termid":"PBO:0079404"}


id: PBO:0064833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 10 pseudogene 1","termid":"PBO:0064833"}


id: MONDO:1012423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D-deficiency rickets, non-type I, non-type II, non-human animal","termid":"MONDO:1011962"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin D-deficiency rickets, non-type I, non-type II, domestic cat","secondary_identifiers":["OMIA:001614-9685"],"termid":"MONDO:1012423","xrefs":{"Monarch":{"xref_id":"1012423"}}}


id: GO:0044328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in the positive regulation of endothelial cell migration.","definition_xrefs":["GOC:jl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in positive regulation of endothelial cell migration (obsolete GO:0044328)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of endothelial cell migration","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in positive regulation of endothelial cell migration","type":"exact"}],"termid":"GO:0044328"}


id: GO:0085013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the symbiont organism by a type VII secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by type VII secretion system (obsolete GO:0085013)","termid":"GO:0085013"}


id: MONDO:1012247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rod-cone dysplasia, non-human animal","termid":"MONDO:1011982"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rod-cone dysplasia, domestic cat","secondary_identifiers":["OMIA:000881-9685"],"termid":"MONDO:1012247","xrefs":{"Monarch":{"xref_id":"1012247"}}}


id: PBO:0039481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A4, pseudogene","termid":"PBO:0039481"}


id: FYPO:0008163
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of nuclear foci are increased.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased number of nuclear foci","termid":"FYPO:0008163"}


id: GO:1903147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrion degradation by autophagy.","definition_xrefs":["GOC:PARL","GOC:autophagy","GOC:bf","GO_REF:0000058","GOC:TermGenie","PMID:24600391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of autophagy","termid":"GO:0010507"},{"relation_name":"is_a","term_name":"regulation of autophagy of mitochondrion","termid":"GO:1903146"},{"relation_name":"negatively_regulates","term_name":"autophagy of mitochondrion","termid":"GO:0000422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"negative regulation of autophagy of mitochondrion","synonyms":[{"name":"down regulation of mitochondrial degradation","type":"broad"},{"name":"down regulation of mitochondrion degradation","type":"broad"},{"name":"down-regulation of mitochondrion degradation","type":"broad"},{"name":"down-regulation of mitophagy","type":"broad"},{"name":"downregulation of mitochondrion degradation","type":"broad"},{"name":"inhibition of mitochondrion degradation","type":"related"},{"name":"inhibition of mitophagy","type":"narrow"}],"termid":"GO:1903147"}


id: PBO:0049507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 14","termid":"PBO:0049507"}


id: PBO:0077093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell immunoreceptor with Ig and ITIM domains","termid":"PBO:0077093"}


id: GO:0048922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a migrating neuromast primordium deposits clusters of undifferentiated cells (proneuromasts) along its migratory path in the developing posterior lateral line.","definition_xrefs":["PMID:15832385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast deposition","termid":"GO:0048885"},{"relation_name":"part_of","term_name":"posterior lateral line neuromast development","termid":"GO:0048919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast deposition","termid":"GO:0048922"}


id: PBO:0049231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate metabotropic receptor 4","termid":"PBO:0049231"}


id: PBO:0111798
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch domain","termid":"PBO:0111798"}


id: GO:0042913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of group A colicins (colicins E1, E2, E3, A, K, and N) from one side of a membrane to the other.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","PMID:9171417","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colicin transmembrane transporter activity","termid":"GO:0042912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"group A colicin transmembrane transporter activity","termid":"GO:0042913"}


id: PR:O13690
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- syt22 gene.","definition_xrefs":["UniProtKB:O13690","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PH and SEC7 domain-containing protein C11E3.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.11c","synonyms":[{"name":"Spom972h-syt22","type":"exact"}],"termid":"PR:O13690"}


id: PBO:0035789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_replication_fork_pausing_at_highly_transcribed_RNA_polymerase_II_genes","termid":"PBO:0035789"}


id: PBO:0050798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 6","termid":"PBO:0050798"}


id: PBO:0081091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZDHHC20 intronic transcript 1","termid":"PBO:0081091"}


id: PBO:0065108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C beta","termid":"PBO:0065108"}


id: GO:0016230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of the enzyme sphingomyelin phosphodiesterase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activator activity","termid":"GO:0016004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0003674","GO:0140677","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"sphingomyelin phosphodiesterase activator activity","synonyms":[{"name":"neutral sphingomyelinase activator","type":"exact"}],"termid":"GO:0016230"}


id: PBO:0083428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YBR225W","termid":"PBO:0083428"}


id: GO:0003777
data:
  {"annotated_genes":["SJAG_02286","SJAG_02336","SJAG_00042","SJAG_01546","SJAG_01613","SJAG_01297","SJAG_00930","SJAG_00332","SJAG_00773","SJAG_00851","SJAG_04745"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62051],"is_not":false,"summary":null,"term":"GO:0003777"},{"annotations":[96678,59426,98691,67400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008569"},{"annotations":[80617,77581,63023,105483,105683,77708,79586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008574"}]},"cv_name":"molecular_function","definition":"A motor activity that generates movement along a microtubule, driven by ATP hydrolysis.","definition_xrefs":["PMID:19686686","PMID:32684327","PMID:32842864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal motor activity","termid":"GO:0003774"},{"relation_name":"is_a","term_name":"polypeptide conformation or assembly isomerase activity","termid":"GO:0120544"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00042":null,"SJAG_00332":null,"SJAG_00773":null,"SJAG_00851":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003774"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0003774","GO:0016853"],"is_obsolete":false,"name":"microtubule motor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-265160","Reactome:R-HSA-177479","Reactome:R-HSA-9610627","GO:1990939"],"synonyms":[{"name":"ATP-dependent microtubule motor activity","type":"exact"},{"name":"axonemal motor activity","type":"narrow"},{"name":"dynein","type":"broad"},{"name":"dynein ATPase activity","type":"narrow"},{"name":"kinesin","type":"broad"},{"name":"kinesin motor activity","type":"narrow"},{"name":"kinetochore motor activity","type":"narrow"}],"termid":"GO:0003777","terms_by_termid":{"GO:0003777":null,"GO:0008569":null,"GO:0008574":null}}


id: GO:0036227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the mitotic cell cycle is halted during G2 phase as a result of deprivation of glucose.","definition_xrefs":["GOC:al","PMID:958201","GOC:mah","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle","termid":"GO:0051726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic G2 cell cycle arrest in response to glucose starvation","termid":"GO:0036227"}


id: GO:0006779
data:
  {"annotated_genes":["SJAG_04515","SJAG_01786","SJAG_03862","SJAG_01192","SJAG_01155","SJAG_02896","SJAG_00097","SJAG_01372","SJAG_04944","SJAG_02876","SJAG_04397","SJAG_05283","SJAG_03173","SJAG_00699","SJAG_00626","SJAG_01841","SJAG_04984","SJAG_03961","SJAG_04109"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80174,81827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"},{"annotations":[103019,76078,100138,102165,107141,115871,113859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006783"},{"annotations":[63905,65884,59470,57225,68920,81824,63892,60622],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006782"},{"annotations":[73117,78701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"},{"annotations":[76693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006780"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.","definition_xrefs":["ISBN:0198506732","GOC:jl","Wikipedia:Porphyrin#Natural_formation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound metabolic process","termid":"GO:0006778"},{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00626":null,"SJAG_00699":null,"SJAG_01155":null,"SJAG_01192":null,"SJAG_01372":null,"SJAG_01786":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03173":null,"SJAG_03862":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04397":null,"SJAG_04515":null,"SJAG_04944":null,"SJAG_04984":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"porphyrin-containing compound biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"porphyrin anabolism","type":"related"},{"name":"porphyrin biosynthesis","type":"related"},{"name":"porphyrin biosynthetic process","type":"related"},{"name":"porphyrin formation","type":"related"},{"name":"porphyrin synthesis","type":"related"}],"termid":"GO:0006779","terms_by_termid":{"GO:0006780":null,"GO:0006782":null,"GO:0006783":null,"GO:0006784":null,"GO:0019354":null}}


id: PBO:0087406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase; assists Cdc48p in the dislocation of misfolded, polyubiquitinated ERAD substrates that are subsequently delivered to the proteasome for degradation; also involved in the regulated destruction of resident ER membrane proteins, such as HMG-CoA reductase (Hmg1/2p) and cytoplasmic proteins (Fbp1p); role in mobilizing membrane bound transcription factors by regulated ubiquitin/proteasome-dependent processing (RUP)","termid":"PBO:0087406"}


id: PBO:0005277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I, II and III subunit Rpb6","termid":"PBO:0005277"}


id: PBO:0078281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 14-1","termid":"PBO:0078281"}


id: MONDO:0018590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amyloidosis","termid":"MONDO:0019065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"ABeta2M amyloidosis","secondary_identifiers":["DOID:0080928","GARD:21829","Orphanet:439246","icd11.foundation:448754119","UMLS:C5680053","MEDGEN:1842860"],"synonyms":[{"name":"Beta2-microglobulinic amyloidosis","type":"exact"}],"termid":"MONDO:0018590","xrefs":{"Monarch":{"xref_id":"0018590"}}}


id: PBO:0004220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mago Nashi interacting protein (predicted)","termid":"PBO:0004220"}


id: GO:0098709
data:
  {"annotated_genes":["SJAG_01660"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97426],"is_not":false,"summary":null,"term":"GO:0098709"}]},"cv_name":"biological_process","definition":"The directed movement of glutathione from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutathione transmembrane transport","termid":"GO:0034775"},{"relation_name":"is_a","term_name":"tripeptide import across plasma membrane","termid":"GO:0140207"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"glutathione import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0036347"],"synonyms":[{"name":"glutathione import into cell","type":"exact"},{"name":"glutathione uptake","type":"exact"}],"termid":"GO:0098709","terms_by_termid":{"GO:0098709":null}}


id: MONDO:0009638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial myopathy with a defect in mitochondrial-protein transport","secondary_identifiers":["UMLS:C1855034","MESH:C565376","MEDGEN:381541","OMIM:251945"],"synonyms":[{"name":"mitochondrial myopathy with a defect in mitochondrial-protein transport","type":"exact"}],"termid":"MONDO:0009638","xrefs":{"Monarch":{"xref_id":"0009638"}}}


id: MONDO:0003442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papillary epithelial neoplasm that involves the urinary bladder urothelium.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary urothelial neoplasm","termid":"MONDO:0003443"},{"relation_name":"is_a","term_name":"urinary bladder neoplasm","termid":"MONDO:0004987"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bladder papillary urothelial neoplasm","secondary_identifiers":["DOID:5432","MEDGEN:267741","UMLS:C1511197","NCIT:C39857"],"synonyms":[{"name":"bladder papillary transitional cell neoplasm","type":"exact"},{"name":"bladder papillary urothelial neoplasm","type":"exact"},{"name":"urinary bladder papillary transitional cell neoplasm","type":"exact"},{"name":"urinary bladder papillary urothelial neoplasm","type":"exact"},{"name":"urinary bladder urothelium papillary epithelial neoplasm","type":"exact"}],"termid":"MONDO:0003442","xrefs":{"Monarch":{"xref_id":"0003442"}}}


id: GO:1900294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of heptasaccharide transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"heptasaccharide transport","termid":"GO:2001104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of heptasaccharide transport","termid":"GO:1900294"}


id: GO:0015525
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete carbonyl cyanide m-chlorophenylhydrazone/nalidixic acid/organomercurials:hydrogen antiporter activity (obsolete GO:0015525)","synonyms":[{"name":"carbonyl cyanide m-chlorophenylhydrazone/nalidixic acid/organomercurials:hydrogen antiporter activity","type":"exact"},{"name":"carbonyl cyanide m-chlorophenylhydrazone/nalidixic acid/organomercurials:proton antiporter activity","type":"exact"}],"termid":"GO:0015525"}


id: PBO:0091252
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae RAD54","termid":"PBO:0091252"}


id: FYPO:0003083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at the mating-type locus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest","termid":"FYPO:0003088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000293","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal replication fork arrest at mating-type locus","synonyms":[{"name":"abnormal replication fork arrest at mating-type locus during mitotic cell cycle","type":"related"},{"name":"abnormal replication fork arrest at mating-type locus during vegetative growth","type":"exact"}],"termid":"FYPO:0003083"}


id: GO:1900162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of phospholipid scramblase activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phospholipid scramblase activity (obsolete GO:1900162)","synonyms":[{"name":"down regulation of phospholipid scramblase activity","type":"exact"},{"name":"down-regulation of phospholipid scramblase activity","type":"exact"},{"name":"downregulation of phospholipid scramblase activity","type":"exact"},{"name":"inhibition of phospholipid scramblase activity","type":"narrow"}],"termid":"GO:1900162"}


id: PBO:0045107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA meiotic recombinase 1","termid":"PBO:0045107"}


id: GO:0102488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dTTP + 2 H2O = dTMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dTTP phosphohydrolase activity (obsolete GO:0102488)","termid":"GO:0102488"}


id: PBO:0076795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane epididymal protein 2, pseudogene","termid":"PBO:0076795"}


id: MONDO:0042604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sandhaus-Ben-Ami syndrome","secondary_identifiers":["MEDGEN:444058","UMLS:C2931451","MESH:C537233"],"synonyms":[{"name":"Sandhaus Ben-Ami syndrome","type":"related"},{"name":"patella hypoplasia skeletal malformations","type":"related"}],"termid":"MONDO:0042604","xrefs":{"Monarch":{"xref_id":"0042604"}}}


id: PR:O43050
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3F6.02c","secondary_identifiers":["UniProtKB:O43050"],"synonyms":[{"name":"Spom972h-NSDHL","type":"exact"}],"termid":"PR:O43050"}


id: PBO:0068561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 12, pseudogene","termid":"PBO:0068561"}


id: GO:0047402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + protein alpha-D-glucosyl-1,2-beta-D-galactosyl-L-hydroxylysine = protein beta-D-galactosyl-L-hydroxylysine + beta-D-glucose. The enzyme specifically hydrolyzes glucose from alpha-D-glucosyl- (1->2)-beta-D-galactosyl disaccharide units that are linked to hydroxylysine residues of collagen and collagen-like proteins.","definition_xrefs":["EC:3.2.1.107","MetaCyc:3.2.1.107-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosidase activity","termid":"GO:0015926"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"protein-glucosylgalactosylhydroxylysine glucosidase activity","secondary_identifiers":["RHEA:11068"],"synonyms":[{"name":"2-O-alpha-D-glucopyranosyl-5-O-alpha-D-galactopyranosylhydroxy-L-lysine glucohydrolase activity","type":"related"},{"name":"protein-alpha-D-glucosyl-1,2-beta-D-galactosyl-L-hydroxylysine glucohydrolase activity","type":"related"}],"termid":"GO:0047402"}


id: GO:0009013
data:
  {"annotated_genes":["SJAG_03293","SJAG_00674"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79325,77801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004777"},{"annotations":[89293,90285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036243"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: succinate semialdehyde + NAD(P)+ + H2O = succinate + NAD(P)H + H+.","definition_xrefs":["EC:1.2.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00674":null,"SJAG_03293":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase [NAD(P)+] activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["UM-BBD_reactionID:r0371"],"synonyms":[{"name":"succinate semialdehyde dehydrogenase (nicotinamide adenine dinucleotide (phosphate))","type":"related"},{"name":"succinate-semialdehyde:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0009013","terms_by_termid":{"GO:0004777":null,"GO:0036243":null}}


id: PBO:0028079
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vegetative_cell_phenotype","termid":"PBO:0028079"}


id: PBO:0089410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine family transmembrane transporter","termid":"PBO:0089410"}


id: GO:0019273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-alanine, via the intermediate ornithine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ornithine metabolic process","termid":"GO:0006591"},{"relation_name":"is_a","term_name":"L-alanine biosynthetic process","termid":"GO:0042852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-alanine biosynthetic process via ornithine","synonyms":[{"name":"L-alanine anabolism via ornithine","type":"exact"},{"name":"L-alanine formation via ornithine","type":"exact"},{"name":"L-alanine synthesis via ornithine","type":"exact"}],"termid":"GO:0019273"}


id: MONDO:1010430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atherosclerosis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atherosclerosis, non-human animal","termid":"MONDO:1010008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atherosclerosis, dog","secondary_identifiers":["OMIA:000080-9615"],"termid":"MONDO:1010430","xrefs":{"Monarch":{"xref_id":"1010430"}}}


id: PR:Q9UTF8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ugo1 gene.","definition_xrefs":["UniProtKB:Q9UTF8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fusion and transport protein ugo1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B2.02c","synonyms":[{"name":"Spom972h-ugo1","type":"exact"}],"termid":"PR:Q9UTF8"}


id: PBO:0070094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 8 pseudogene","termid":"PBO:0070094"}


id: PBO:0049335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIH subunit 2B (pseudogene)","termid":"PBO:0049335"}


id: PBO:0070533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 32","termid":"PBO:0070533"}


id: MONDO:1012791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any osteogenesis imperfecta that occurs in dogs due to a mutation in the COL1A2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta, dog","termid":"MONDO:1011581"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteogenesis imperfecta, COL1A2-related, dog","secondary_identifiers":["OMIA:002112-9615"],"termid":"MONDO:1012791","xrefs":{"Monarch":{"xref_id":"1012791"}}}


id: MONDO:0005485
data:
  {"annotated_genes":["SJAG_01466","SJAG_03712"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89202,89201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005090"}]},"cv_name":"mondo","definition":"An abnormal condition of the mind that involves a loss of contact with reality. People experiencing psychosis may exhibit personality changes and thought disorder. Depending on its severity, this may be accompanied by unusual or bizarre behavior, as well as difficulty with social interaction and impairment in carrying out daily life activities.","definition_xrefs":["Wikipedia:Psychosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cognitive disorder","termid":"MONDO:0002039"},{"relation_name":"is_a","term_name":"mental disorder","termid":"MONDO:0005084"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01466":null,"SJAG_03712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"psychotic disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0000709","ICD9:298.9","EFO:0005407","UMLS:C0033975","NCIT:C78576","SCTID:69322001","DOID:2468","ICD9:298.8","MEDGEN:19568"],"synonyms":[{"name":"mental or behavioral disorder","type":"broad"},{"name":"mental or behavioural disorder","type":"broad"},{"name":"psychosis","type":"exact"}],"termid":"MONDO:0005485","terms_by_termid":{"MONDO:0005090":null},"xrefs":{"Monarch":{"xref_id":"0005485"}}}


id: PBO:0059356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S17","termid":"PBO:0059356"}


id: GO:0102866
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an (8Z,11Z,14Z)-icosatrienoyl-containing glycerolipid + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = (5Z,8Z,11Z,14Z)-eicosatetraenoyl-containing glycerolipid + 2 Fe(III)-[cytochrome b5] + 2 H2O. Also converts an (8Z,11Z,14Z,17Z)-eicosatetraenoyl-containing glycerolipid into a (5Z,8Z,11Z,14Z,17Z)-eicosapentaenoyl-containing glycerolipid.","definition_xrefs":["EC:1.14.19.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"acyl-lipid (8-3)-desaturase activity","synonyms":[{"name":"Delta(5)-fatty-acid desaturase activity","type":"exact"},{"name":"acyl-lipid 5-desaturase activity","type":"related"},{"name":"di-homo-gamma-linolenate delta5 desaturase activity","type":"related"}],"termid":"GO:0102866"}


id: PBO:0049724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 6 pseudogene 2","termid":"PBO:0049724"}


id: GO:0033388
data:
  {"annotated_genes":["SJAG_00043"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033387"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane, from other compounds, including arginine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arginine metabolic process","termid":"GO:0006525"},{"relation_name":"is_a","term_name":"glutamine family amino acid metabolic process","termid":"GO:0009064"},{"relation_name":"is_a","term_name":"putrescine biosynthetic process","termid":"GO:0009446"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00043":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"putrescine biosynthetic process from arginine","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"putrescine anabolism from arginine","type":"exact"},{"name":"putrescine biosynthesis from arginine","type":"exact"},{"name":"putrescine formation from arginine","type":"exact"},{"name":"putrescine synthesis from arginine","type":"exact"}],"termid":"GO:0033388","terms_by_termid":{"GO:0033387":null}}


id: MONDO:1012712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis that occurs in dogs due to a mutation in the PNPLA1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"ichthyosis, dog","termid":"MONDO:1012978"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis, PNPLA1-related, dog","secondary_identifiers":["OMIA:001588-9615"],"termid":"MONDO:1012712","xrefs":{"Monarch":{"xref_id":"1012712"}}}


id: PBO:0081827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 750","termid":"PBO:0081827"}


id: PBO:0047986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member C","termid":"PBO:0047986"}


id: PBO:0078411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (CCC) 5-1","termid":"PBO:0078411"}


id: MONDO:0004726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multinodular intermediate fibroblastic neoplasm arising from the liver. It is characterized by the presence of spindle-shaped fibroblasts and myofibroblasts, and a chronic inflammatory infiltrate composed of eosinophils, lymphocytes and plasma cells.","definition_xrefs":["NCIT:C5858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory myofibroblastic tumor","termid":"MONDO:0015798"},{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"liver inflammatory myofibroblastic tumor","secondary_identifiers":["DOID:918","SCTID:717329009","MEDGEN:232275","UMLS:C1333967"],"synonyms":[{"name":"hepatic inflammatory myofibroblastic tumor","type":"exact"},{"name":"hepatic inflammatory myofibroblastic tumour","type":"exact"},{"name":"inflammatory pseudotumor of liver","type":"related"},{"name":"inflammatory pseudotumor of the liver","type":"related"},{"name":"liver inflammatory myofibroblastic tumor","type":"exact"},{"name":"liver inflammatory pseudotumor","type":"broad"}],"termid":"MONDO:0004726","xrefs":{"Monarch":{"xref_id":"0004726"}}}


id: PBO:0030216
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-alpha,alpha-trehalase_activity_increase_abolished_during_cellular_response_to_heat","termid":"PBO:0030216"}


id: GO:0034998
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An oligosaccharyltransferase (OST) complex that contains at least seven polypeptides and is the major OST complex in mammalian cells. Of the three forms of mammalian OST complex identified, the OSTI complex has the weakest affinity for ribosomes.","definition_xrefs":["PMID:15835887"],"gene_count":0,"genotype_count":0,"name":"obsolete oligosaccharyltransferase I complex (obsolete GO:0034998)","synonyms":[{"name":"OSTCI","type":"exact"}],"termid":"GO:0034998"}


id: GO:0018413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The O-glucuronidation of peptidyl-serine to form peptidyl-O3-D-glucuronyl-L-serine.","definition_xrefs":["RESID:AA0291"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-serine O-glucuronidation (obsolete GO:0018413)","termid":"GO:0018413"}


id: GO:2000967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell wall polysaccharide catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of cell wall polysaccharide catabolic process","termid":"GO:2000966"},{"relation_name":"negatively_regulates","term_name":"cell wall polysaccharide catabolic process","termid":"GO:0044347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell wall polysaccharide catabolic process","synonyms":[{"name":"negative regulation of cell wall polysaccharide breakdown","type":"exact"}],"termid":"GO:2000967"}


id: GO:0000993
data:
  {"annotated_genes":["SJAG_00483","SJAG_02037","SJAG_04353","SJAG_00448","SJAG_01151","SJAG_03118","SJAG_01610","SJAG_04933","SJAG_00139"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57555,72849,74058,78033,80421,80432],"is_not":false,"summary":null,"term":"GO:0000993"},{"annotations":[66378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099122"},{"annotations":[79977,74286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"}]},"cv_name":"molecular_function","definition":"Binding to an RNA polymerase II core enzyme, a multisubunit eukaryotic nuclear RNA polymerase typically composed of twelve subunits.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basal RNA polymerase II transcription machinery binding","termid":"GO:0001099"},{"relation_name":"is_a","term_name":"RNA polymerase core enzyme binding","termid":"GO:0043175"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_00448":null,"SJAG_00483":null,"SJAG_01151":null,"SJAG_01610":null,"SJAG_02037":null,"SJAG_03118":null,"SJAG_04353":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase II complex binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"RNA polymerase II core binding","type":"exact"},{"name":"RNAP II core binding","type":"exact"}],"termid":"GO:0000993","terms_by_termid":{"GO:0000993":null,"GO:0099122":null,"GO:1990269":null}}


id: PBO:0029225
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_homologous_chromosome_pairing","termid":"PBO:0029225"}


id: PBO:0051610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 34","termid":"PBO:0051610"}


id: PBO:0091220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acyl DHAP reductase Ayr2","termid":"PBO:0091220"}


id: MONDO:0016167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Optic pathway glioma (OPG) is a benign tumor that develop along the optic nerve (chiasm, tracts, and radiations) characterized by impairment or loss of vision and may be accompanied by diencephalic symptoms such as reduced growth and alteration in sleeping patterns. OPG are often linked to neurofibromatosis type 1 (NF1).","definition_xrefs":["Orphanet:2086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visual pathway disorder","termid":"MONDO:0001834"},{"relation_name":"is_a","term_name":"tumor of cranial and spinal nerves","termid":"MONDO:0016749"},{"relation_name":"is_a","term_name":"glioma","termid":"MONDO:0021042"},{"relation_name":"is_a","term_name":"brain neoplasm","termid":"MONDO:0021211"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"optic pathway glioma","secondary_identifiers":["UMLS:C0796418","GARD:4107","MEDGEN:162950","icd11.foundation:1000103370","NCIT:C8567"],"synonyms":[{"name":"glioma of optic tract","type":"exact"},{"name":"glioma of the optic tract","type":"exact"},{"name":"glioma of the visual pathway","type":"exact"},{"name":"glioma of visual pathway","type":"exact"},{"name":"optic pathway glioma","type":"exact"},{"name":"optic tract glioma","type":"exact"},{"name":"visual pathway glioma","type":"exact"}],"termid":"MONDO:0016167","xrefs":{"Monarch":{"xref_id":"0016167"}}}


id: PBO:0047051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM111A divergent transcript","termid":"PBO:0047051"}


id: PBO:0026950
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_vorinostat","termid":"PBO:0026950"}


id: GO:0022018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of lateral ganglionic eminence cells, resulting in the expansion of the cell population.","definition_xrefs":["GOC:cls","GOC:dph","GOC:dgh","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subpallium cell proliferation in forebrain","termid":"GO:0022012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral ganglionic eminence cell proliferation","termid":"GO:0022018"}


id: MONDO:0011764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Parkinson disease in which the cause of the disease is a mutation in the LRRK2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"late-onset Parkinson disease","termid":"MONDO:0008199"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant Parkinson disease 8","secondary_identifiers":["DOID:0060371","MEDGEN:339628","OMIM:607060","UMLS:C1846862","GARD:18476"],"synonyms":[{"name":"LRRK2 Parkinson disease","type":"exact"},{"name":"PARK8","type":"related"},{"name":"Parkinson disease 8","type":"exact"},{"name":"Parkinson disease 8, autosomal dominant","type":"related"},{"name":"Parkinson disease caused by mutation in LRRK2","type":"exact"},{"name":"autosomal dominant Parkinson disease 8","type":"exact"},{"name":"autosomal dominant Parkinson disease type 8","type":"exact"},{"name":"autosomal dominant Parkinson's disease 8","type":"related"}],"termid":"MONDO:0011764","xrefs":{"Monarch":{"xref_id":"0011764"}}}


id: PBO:0004082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, involved in ribosome biogenesis (predicted)","termid":"PBO:0004082"}


id: GO:0072764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reversine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to purine-containing compound","termid":"GO:0071415"},{"relation_name":"is_a","term_name":"response to reversine","termid":"GO:1901596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to reversine","termid":"GO:0072764"}


id: GO:0072317
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans that contributes to the release of ascospores from the ascus.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete glucan endo-1,3-beta-D-glucosidase activity involved in ascospore release from ascus (obsolete GO:0072317)","termid":"GO:0072317"}


id: GO:0045610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hemocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"hemocyte differentiation","termid":"GO:0042386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hemocyte differentiation","synonyms":[{"name":"regulation of arthropod blood cell differentiation","type":"exact"}],"termid":"GO:0045610"}


id: MONDO:0010936
data:
  {"annotated_genes":["SJAG_04489"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87149],"is_not":false,"summary":null,"term":"MONDO:0010936"}]},"cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the CHMP2B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"},{"relation_name":"is_a","term_name":"behavioral variant of frontotemporal dementia","termid":"MONDO:0017160"},{"relation_name":"is_a","term_name":"frontotemporal dementia and/or amyotrophic lateral sclerosis","termid":"MONDO:0030923"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04489":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"frontotemporal dementia and/or amyotrophic lateral sclerosis 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:318833","MESH:C563708","OMIM:614696","SCTID:702393003","UMLS:C1833296","DOID:0111227","MESH:C579991","OMIM:600795","GARD:15322","DOID:0060208","ICD9:331.19"],"synonyms":[{"name":"CHMP2B amyotrophic lateral sclerosis","type":"exact"},{"name":"CHMP2B-related amyotrophic lateral sclerosis","type":"exact"},{"name":"Dmt1","type":"related"},{"name":"FTD3","type":"exact"},{"name":"amyotrophic lateral sclerosis caused by mutation in CHMP2B","type":"exact"},{"name":"amyotrophic lateral sclerosis, Chmp2B-related","type":"exact"},{"name":"dementia, familial nonspecific","type":"related"},{"name":"frontotemporal dementia, chromosome 3-linked","type":"exact"}],"termid":"MONDO:0010936","terms_by_termid":{"MONDO:0010936":null},"xrefs":{"Monarch":{"xref_id":"0010936"}}}


id: PBO:0059579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTA1 divergent transcript","termid":"PBO:0059579"}


id: PBO:0039457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 9","termid":"PBO:0039457"}


id: PBO:0064108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 1, transient receptor potential channel interacting","termid":"PBO:0064108"}


id: GO:1901032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to reactive oxygen species.","definition_xrefs":["GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to reactive oxygen species","termid":"GO:1901031"},{"relation_name":"is_a","term_name":"negative regulation of response to oxidative stress","termid":"GO:1902883"},{"relation_name":"negatively_regulates","term_name":"response to reactive oxygen species","termid":"GO:0000302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to reactive oxygen species","synonyms":[{"name":"down regulation of response to AOS","type":"exact"},{"name":"down regulation of response to ROI","type":"exact"},{"name":"down regulation of response to ROS","type":"exact"},{"name":"down regulation of response to active oxygen species","type":"exact"},{"name":"down regulation of response to reactive oxidative species","type":"exact"},{"name":"down regulation of response to reactive oxygen intermediate","type":"exact"},{"name":"down regulation of response to reactive oxygen species","type":"exact"},{"name":"down-regulation of response to AOS","type":"exact"},{"name":"down-regulation of response to ROI","type":"exact"},{"name":"down-regulation of response to ROS","type":"exact"},{"name":"down-regulation of response to active oxygen species","type":"exact"},{"name":"down-regulation of response to reactive oxidative species","type":"exact"},{"name":"down-regulation of response to reactive oxygen intermediate","type":"exact"},{"name":"down-regulation of response to reactive oxygen species","type":"exact"},{"name":"downregulation of response to AOS","type":"exact"},{"name":"downregulation of response to ROI","type":"exact"},{"name":"downregulation of response to ROS","type":"exact"},{"name":"downregulation of response to active oxygen species","type":"exact"},{"name":"downregulation of response to reactive oxidative species","type":"exact"},{"name":"downregulation of response to reactive oxygen intermediate","type":"exact"},{"name":"downregulation of response to reactive oxygen species","type":"exact"},{"name":"inhibition of response to AOS","type":"exact"},{"name":"inhibition of response to ROI","type":"exact"},{"name":"inhibition of response to ROS","type":"exact"},{"name":"inhibition of response to active oxygen species","type":"exact"},{"name":"inhibition of response to reactive oxidative species","type":"exact"},{"name":"inhibition of response to reactive oxygen intermediate","type":"exact"},{"name":"inhibition of response to reactive oxygen species","type":"narrow"},{"name":"negative regulation of response to AOS","type":"exact"},{"name":"negative regulation of response to ROI","type":"exact"},{"name":"negative regulation of response to ROS","type":"exact"},{"name":"negative regulation of response to active oxygen species","type":"exact"},{"name":"negative regulation of response to reactive oxidative species","type":"exact"},{"name":"negative regulation of response to reactive oxygen intermediate","type":"exact"}],"termid":"GO:1901032"}


id: FYPO:0007415
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which telomere maintenance, i.e. any process that contributes to the maintenance of proper telomeric length and structure, is abnormal.","definition_xrefs":["PomBase:mah","GO:0000723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolism phenotype","termid":"FYPO:0000293"},{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"abnormal telomere maintenance","synonyms":[{"name":"telomere maintenance defects","type":"exact"}],"termid":"FYPO:0007415"}


id: PR:P87306
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- srb4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.04c","synonyms":[{"name":"Spom972h-srb4","type":"exact"},{"name":"mediator complex subunit 17 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"suppressor of RNA polymerase B 4 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87306"}


id: PBO:0041137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"betacellulin","termid":"PBO:0041137"}


id: GO:0019772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with low affinity with an immunoglobulin of an IgG isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","GOC:signaling","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgG receptor activity","termid":"GO:0019770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"low-affinity IgG receptor activity","synonyms":[{"name":"low affinity Fc receptor activity","type":"related"},{"name":"low affinity IgG receptor activity","type":"exact"}],"termid":"GO:0019772"}


id: MONDO:0002398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign adenofibroma characterized by the presence of epithelial cells which contain intracytoplasmic mucin and a fibrotic stroma. A representative example is the ovarian mucinous adenofibroma. Cases with epithelial atypia described in the ovary lacking stromal invasion are designated as borderline mucinous adenofibromas and have a low grade malignant potential.","definition_xrefs":["NCIT:C8978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenofibroma","termid":"MONDO:0006071"},{"relation_name":"is_a","term_name":"mucinous neoplasm","termid":"MONDO:0024338"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucinous adenofibroma","secondary_identifiers":["ICDO:9015/0","DOID:2700","MEDGEN:83158","UMLS:C0334499"],"synonyms":[{"name":"mucinous adenofibroma","type":"exact"}],"termid":"MONDO:0002398","xrefs":{"Monarch":{"xref_id":"0002398"}}}


id: PBO:0085206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer mitochondrial membrane GTPase, subunit of the ERMES complex; potential regulatory subunit of the ERMES complex that links the ER to mitochondria and may promote inter-organellar calcium and phospholipid exchange as well as coordinating mitochondrial DNA replication and growth; cells lacking Gem1p contain collapsed, globular, or grape-like mitochondria; ortholog of metazoan Miro GTPases","termid":"PBO:0085206"}


id: MONDO:0060591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunodeficiency, developmental delay, and hypohomocysteinemia","secondary_identifiers":["OMIM:617744","UMLS:C4540293","MEDGEN:1616061"],"synonyms":[{"name":"IMDDHH","type":"related"},{"name":"immunodeficiency, developmental delay, and hypohomocysteinemia","type":"exact"}],"termid":"MONDO:0060591","xrefs":{"Monarch":{"xref_id":"0060591"}}}


id: GO:0019660
data:
  {"annotated_genes":["SJAG_03822","SJAG_03743","SJAG_03370","SJAG_01414","SJAG_05006","SJAG_00240"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90369,100644,116614,100645,116615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019655"},{"annotations":[98488],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2001172"}]},"cv_name":"biological_process","definition":"Fermentation that includes the anaerobic conversion of glucose to pyruvate via the glycolytic pathway.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fermentation","termid":"GO:0006113"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00240":null,"SJAG_01414":null,"SJAG_03370":null,"SJAG_03743":null,"SJAG_03822":null,"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"glycolytic fermentation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:Pyruvate-Degradation"],"termid":"GO:0019660","terms_by_termid":{"GO:0019655":null,"GO:2001172":null}}


id: MONDO:0030718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 67","secondary_identifiers":["OMIM:619803","UMLS:C5676947","DOID:0070566","MEDGEN:1804099"],"synonyms":[{"name":"SPGF67","type":"exact"},{"name":"spermatogenic failure 67","type":"exact"}],"termid":"MONDO:0030718","xrefs":{"Monarch":{"xref_id":"0030718"}}}


id: GO:0032802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a low-density lipoprotein particle receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process","termid":"GO:0030163"},{"relation_name":"is_a","term_name":"low-density lipoprotein receptor particle metabolic process","termid":"GO:0032799"},{"relation_name":"is_a","term_name":"receptor catabolic process","termid":"GO:0032801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"low-density lipoprotein particle receptor catabolic process","secondary_identifiers":["Reactome:R-HSA-8866427"],"synonyms":[{"name":"LDL receptor breakdown","type":"exact"},{"name":"LDL receptor catabolic process","type":"exact"},{"name":"LDL receptor catabolism","type":"related"},{"name":"LDL receptor degradation","type":"exact"},{"name":"low-density lipoprotein receptor breakdown","type":"exact"},{"name":"low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"low-density lipoprotein receptor catabolism","type":"exact"},{"name":"low-density lipoprotein receptor degradation","type":"exact"}],"termid":"GO:0032802"}


id: PBO:0059829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial transcription termination factor 3","termid":"PBO:0059829"}


id: GO:0030172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to troponin C, the calcium-binding subunit of the troponin complex.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515","GO:0008092"],"is_obsolete":false,"name":"troponin C binding","termid":"GO:0030172"}


id: MONDO:0019459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myeloid sarcoma (obsolete MONDO:0019459)","termid":"MONDO:0019459","xrefs":{"Monarch":{"xref_id":"0019459"}}}


id: GO:0002283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a neutrophil resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell activation involved in immune response","termid":"GO:0002275"},{"relation_name":"is_a","term_name":"neutrophil activation","termid":"GO:0042119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil activation involved in immune response","synonyms":[{"name":"neutrophil activation during immune response","type":"related"}],"termid":"GO:0002283"}


id: PBO:0054338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1731","termid":"PBO:0054338"}


id: MONDO:0022308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A progressive neurodegenerative condition affecting the cerebral cortex and basal ganglia. The disorder is characterized by varying degrees of cognitive and motor impairment.","definition_xrefs":["NCIT:C129069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"cerebral degeneration","termid":"MONDO:0024238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"corticobasal degeneration disorder","secondary_identifiers":["NANDO:1200011","MEDGEN:95979","SCTID:18842008","UMLS:C0393570"],"synonyms":[{"name":"CBGD","type":"related"},{"name":"cortical basal ganglionic degeneration","type":"exact"},{"name":"cortical-basal ganglionic degeneration","type":"related"},{"name":"cortico-basal ganglionic Degeneration (CBGD)","type":"related"},{"name":"corticobasal degeneration","type":"exact"},{"name":"corticobasal syndrome","type":"related"},{"name":"corticodentatonigral degeneration with neuronal achromasia","type":"related"}],"termid":"MONDO:0022308","xrefs":{"Monarch":{"xref_id":"0022308"}}}


id: GO:0016281
data:
  {"annotated_genes":["SJAG_01954","SJAG_03223","SJAG_00507","SJAG_04772"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74231,75976,76566,89373],"is_not":false,"summary":null,"term":"GO:0016281"}]},"cv_name":"cellular_component","definition":"The eukaryotic translation initiation factor 4F complex is composed of eIF4E, eIF4A and eIF4G; it is involved in the recognition of the mRNA cap, ATP-dependent unwinding of the 5'-terminal secondary structure and recruitment of the mRNA to the ribosome.","definition_xrefs":["PMID:32883864","PMID:8449919","GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA cap binding complex","termid":"GO:0034518"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00507":null,"SJAG_01954":null,"SJAG_03223":null,"SJAG_04772":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 4F complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasmic cap-binding complex","type":"exact"},{"name":"eIF-4F","type":"exact"},{"name":"eukaryotic translation initiation factor 4 complex","type":"broad"}],"termid":"GO:0016281","terms_by_termid":{"GO:0016281":null}}


id: GO:0034855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: androst-4-ene-3,17-dione + O2 + 2 H+ + 2 e- = 9alpha-hydroxy-4-androstene-3,17-dione + H2O.","definition_xrefs":["UM-BBD_reactionID:r1153"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-AD 9alpha-hydroxylase activity (obsolete GO:0034855)","termid":"GO:0034855"}


id: GO:0103092
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-(7'-methylthio)heptylmalate = 3-(7'-methylthio)heptylmalate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete methylthioalkylmalate isomerase activity (obsolete GO:0103092)","termid":"GO:0103092"}


id: PBO:0067235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 306, pseudogene","termid":"PBO:0067235"}


id: PBO:0057113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 200b","termid":"PBO:0057113"}


id: PBO:0034342
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-distributary_of","termid":"PBO:0034342"}


id: GO:0060932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell of the His-Purkinje system. These cells form the fibers regulate cardiac muscle contraction in the ventricles.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell differentiation","termid":"GO:0055007"},{"relation_name":"part_of","term_name":"His-Purkinje system development","termid":"GO:0003164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"His-Purkinje system cell differentiation","termid":"GO:0060932"}


id: MONDO:0006677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retrograde bile flow. Reflux of bile can be from the duodenum to the stomach (duodenogastric reflux); to the esophagus (gastroesophageal reflux); or to the pancreas.","definition_xrefs":["MESH:D001655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biliary tract disorder","termid":"MONDO:0004868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"bile reflux","secondary_identifiers":["EFO:1000838","MEDGEN:2243","DOID:12237","UMLS:C0005403"],"termid":"MONDO:0006677","xrefs":{"Monarch":{"xref_id":"0006677"}}}


id: FYPO:0008336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the addition of one or more uridylyl residues to the poly(A) tails of mRNA molecules is abolished.","definition_xrefs":["PMID:39333464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished RNA modification","termid":"FYPO:0000371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000294"],"is_obsolete":false,"name":"abolished mRNA poly(A) tail uridylation","termid":"FYPO:0008336"}


id: PBO:0065757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pygopus family PHD finger 2","termid":"PBO:0065757"}


id: PBO:0054009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1339","termid":"PBO:0054009"}


id: MONDO:0044302
data:
  {"annotated_genes":["SJAG_03967"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88720],"is_not":false,"summary":null,"term":"MONDO:0044302"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03967":null},"genotype_count":0,"is_obsolete":false,"name":"congenital heart defects, dysmorphic facial features, and intellectual developmental disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1385307","OMIM:617360","Orphanet:646278","DOID:0112247","UMLS:C4479246"],"synonyms":[{"name":"CDK13-related congenital heart defects-intellectual disability-facial dysmorphism syndrome","type":"exact"},{"name":"CHDFIDD","type":"related"},{"name":"congenital heart defects, dysmorphic FACIAL features, and intellectual developmental disorder","type":"related"}],"termid":"MONDO:0044302","terms_by_termid":{"MONDO:0044302":null},"xrefs":{"Monarch":{"xref_id":"0044302"}}}


id: PBO:0050764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 26","termid":"PBO:0050764"}


id: PBO:0085188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of two mitochondrially-localized peptidyl-tRNA hydrolases; negatively regulates the ubiquitin-proteasome pathway via interactions with ubiquitin-like ubiquitin-associated proteins; dispensable for cell growth; see also PTH1","termid":"PBO:0085188"}


id: GO:0021965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the spinal cord ventral commissure are generated and organized.","definition_xrefs":["GOC:dph","GOC:cls","GOC:jid","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"},{"relation_name":"part_of","term_name":"spinal cord development","termid":"GO:0021510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord ventral commissure morphogenesis","termid":"GO:0021965"}


id: PBO:0056457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARVEL domain containing 3","termid":"PBO:0056457"}


id: PBO:0027487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_G0","termid":"PBO:0027487"}


id: PBO:0061016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein interacting with the FHA domain of MKI67","termid":"PBO:0061016"}


id: GO:0098875
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A microvesicle of the epididymal fluid, from which spermatozoa acquire membrane proteins.","definition_xrefs":["PMID:26112475","PMID:23177142","GOC:dos","GOC:mg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microvesicle","termid":"GO:1990742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"epididymosome","termid":"GO:0098875"}


id: GO:0030416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methylamine (CH3NH2).","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methylamine metabolic process","synonyms":[{"name":"methylamine metabolism","type":"exact"},{"name":"methylammonium metabolic process","type":"exact"},{"name":"methylammonium metabolism","type":"exact"}],"termid":"GO:0030416"}


id: PR:P87142
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssz1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 70 homolog C57A7.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.12","synonyms":[{"name":"Spom972h-ssz1","type":"exact"}],"termid":"PR:P87142"}


id: GO:0009607
data:
  {"annotated_genes":["SJAG_03048","SJAG_01805","SJAG_04140","SJAG_04183","SJAG_04332","SJAG_01837","SJAG_00082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95690,113187,118685,104315,91871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[106091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072429"},{"annotations":[104324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"},{"annotations":[104325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[96441,104326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null,"SJAG_04183":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to biotic stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to biotic stress","type":"narrow"}],"termid":"GO:0009607","terms_by_termid":{"GO:0072429":null,"GO:0072435":null,"GO:0072441":null,"GO:0140429":null,"GO:1990820":null}}


id: FYPO:0004792
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between one or more telomeres and the nuclear envelope is smaller than normal during G2 phase of the mitotic cell cycle.","definition_xrefs":["PMID:22959349","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere-nuclear envelope distance during vegetative growth","termid":"FYPO:0004790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased telomere-nuclear envelope distance during mitotic G2 phase","synonyms":[{"name":"decreased distance between telomeres and nuclear envelope during mitotic G2 phase","type":"exact"},{"name":"decreased telomere-nuclear envelope distance during G2 phase during mitotic cell cycle","type":"related"},{"name":"decreased telomere-nuclear envelope distance during mitotic G2 phase during vegetative growth","type":"exact"},{"name":"reduced telomere-nuclear envelope distance during mitotic G2 phase","type":"exact"}],"termid":"FYPO:0004792"}


id: PBO:0000231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S26 (predicted)","termid":"PBO:0000231"}


id: PBO:0043902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich secretory protein 2","termid":"PBO:0043902"}


id: PBO:0086523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; YBR144C is not an essential gene","termid":"PBO:0086523"}


id: PBO:0043411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CKLF like MARVEL transmembrane domain containing 8","termid":"PBO:0043411"}


id: FYECO:0000129
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition where the pH of the medium or assay buffer is higher than the standard pombe growth medium of pH of ~5.6.","definition_xrefs":["PMID:10467002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high pH","secondary_identifiers":["FYECO:0000130"],"synonyms":[{"name":"pH 6.8","type":"narrow"}],"termid":"FYECO:0000129"}


id: PBO:0048723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosyltransferase 1 domain containing 1","termid":"PBO:0048723"}


id: PBO:0036320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAN complex protein phosphotransferase subunit Pan3 (predicted)","termid":"PBO:0036320"}


id: GO:0052816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain fatty acyl-CoA + H2O = a long-chain fatty acid + CoA + H+. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["RHEA:67680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acyl-CoA hydrolase activity","termid":"GO:0047617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"long-chain fatty acyl-CoA hydrolase activity","synonyms":[{"name":"long-chain acyl coenzyme A hydrolase activity","type":"related"},{"name":"long-chain acyl-thioester hydrolase activity","type":"related"},{"name":"long-chain hydrolase activity","type":"related"},{"name":"long-chain-acyl-CoA hydrolase activity","type":"related"}],"termid":"GO:0052816"}


id: PATO:0000934
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000934 u v light sensitivity (obsolete PATO:0000934)","termid":"PATO:0000934"}


id: MONDO:0008625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete urate-binding globulin, decrease 1N (obsolete MONDO:0008625)","secondary_identifiers":["MESH:C566013","OMIM:191530"],"synonyms":[{"name":"urate-binding globulin, decrease IN","type":"related"},{"name":"urate-binding globulin, decrease type 1N","type":"exact"}],"termid":"MONDO:0008625","xrefs":{"Monarch":{"xref_id":"0008625"}}}


id: PBO:0030046
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_ferrous_iron_import","termid":"PBO:0030046"}


id: GO:0016499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with orexin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"orexin receptor activity","termid":"GO:0016499"}


id: PBO:0062482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily A member 1","termid":"PBO:0062482"}


id: MOD:01758
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Proteome Sciences TMT6plex-130 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-130 reporter+balance reagent acylated residue","termid":"MOD:01752"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-130 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01758"}


id: FYPO:0004988
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype in which RNA levels that normally vary over the course of the mitotic cell cycle do not vary, or change in a pattern different from normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PMID:15302827","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression regulation phenotype during vegetative growth","termid":"FYPO:0001333"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal RNA level oscillation during mitotic cell cycle","synonyms":[{"name":"abnormal RNA level fluctuation during mitotic cell cycle","type":"exact"},{"name":"abnormal periodic expression of RNA during mitotic cell cycle","type":"exact"},{"name":"abnormal transcript level oscillation during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0004988"}


id: PBO:0047159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 186 member A","termid":"PBO:0047159"}


id: GO:0072314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a glomerular epithelial cell. Glomerular epithelial cells are specialized epithelial cells that form part of the glomerulus; there are two types, glomerular parietal epithelial cells and glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"glomerular epithelial cell differentiation","termid":"GO:0072311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular epithelial cell fate commitment","termid":"GO:0072314"}


id: GO:0032691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-1 beta production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of interleukin-1 beta production","termid":"GO:0032651"},{"relation_name":"is_a","term_name":"negative regulation of interleukin-1 production","termid":"GO:0032692"},{"relation_name":"negatively_regulates","term_name":"interleukin-1 beta production","termid":"GO:0032611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-1 beta production","secondary_identifiers":["GO:0050724","GO:0050713"],"synonyms":[{"name":"down regulation of interleukin-1 beta production","type":"exact"},{"name":"down-regulation of interleukin-1 beta production","type":"exact"},{"name":"downregulation of interleukin-1 beta production","type":"exact"},{"name":"inhibition of interleukin-1 beta production","type":"narrow"},{"name":"negative regulation of IL-1 beta production","type":"exact"},{"name":"negative regulation of interleukin-1 beta biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-1 beta secretion","type":"narrow"}],"termid":"GO:0032691"}


id: GO:0047077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + ATP + Photinus luciferin = light + diphosphate + AMP + CO2 + oxidized Photinus luciferin.","definition_xrefs":["MetaCyc:1.13.12.7-RXN","EC:1.13.12.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"},{"relation_name":"is_a","term_name":"luciferin monooxygenase activity","termid":"GO:0045289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"Photinus-luciferin 4-monooxygenase (ATP-hydrolyzing) activity","secondary_identifiers":["RHEA:10732"],"synonyms":[{"name":"Photinus luciferin 4-monooxygenase (adenosine triphosphate-hydrolyzing)","type":"related"},{"name":"Photinus pyralis luciferase activity","type":"related"},{"name":"Photinus-luciferin 4-monooxygenase (ATP-hydrolysing)","type":"related"},{"name":"Photinus-luciferin:oxygen 4-oxidoreductase (decarboxylating, ATP-hydrolysing)","type":"related"},{"name":"firefly luciferase activity","type":"related"},{"name":"firefly luciferin luciferase activity","type":"related"},{"name":"luciferase (firefly luciferin)","type":"related"},{"name":"luciferase activity","type":"broad"}],"termid":"GO:0047077"}


id: PBO:0081635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 563","termid":"PBO:0081635"}


id: GO:1904044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an aldosterone stimulus.","definition_xrefs":["PMID:17644563","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mineralocorticoid","termid":"GO:0051385"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to aldosterone","termid":"GO:1904044"}


id: PBO:0059474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSL complex subunit 3 pseudogene 1","termid":"PBO:0059474"}


id: MONDO:0012926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amelogenesis imperfecta in which the cause of the disease is a mutation in the MMP20 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta type 2","termid":"MONDO:0015048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta hypomaturation type 2A2","secondary_identifiers":["GARD:15563","MESH:C567279","DOID:0110060","MEDGEN:436540","OMIM:612529","UMLS:C2675858"],"synonyms":[{"name":"AI2A2","type":"exact"},{"name":"MMP20 amelogenesis imperfecta","type":"exact"},{"name":"amelogenesis imperfecta caused by mutation in MMP20","type":"exact"},{"name":"amelogenesis imperfecta hypomaturation type IIA2","type":"exact"},{"name":"amelogenesis imperfecta pigmented hypomaturation type 2","type":"exact"},{"name":"amelogenesis imperfecta type IIA2","type":"exact"},{"name":"amelogenesis imperfecta, hypomaturation type, IIA2","type":"related"},{"name":"amelogenesis imperfecta, pigmented hypomaturation type, 2","type":"related"},{"name":"amelogenesis imperfecta, type IIA2","type":"exact"}],"termid":"MONDO:0012926","xrefs":{"Monarch":{"xref_id":"0012926"}}}


id: PBO:0002571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated Paf1 complex subunit Tpr1","termid":"PBO:0002571"}


id: null:local:null
data:
  {"annotation_feature_type":"gene","cv_name":"null","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"null","termid":"null:local:null"}


id: GO:0008448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acetyl-D-glucosamine 6-phosphate = acetate + D-glucosamine 6-phosphate.","definition_xrefs":["RHEA:22936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016810","GO:0019213","GO:0003674"],"is_obsolete":false,"name":"N-acetylglucosamine-6-phosphate deacetylase activity","secondary_identifiers":["MetaCyc:NAG6PDEACET-RXN","EC:3.5.1.25","Reactome:R-HSA-6803789"],"synonyms":[{"name":"2-acetamido-2-deoxy-D-glucose-6-phosphate amidohydrolase activity","type":"related"},{"name":"N-acetyl-D-glucosamine-6-phosphate amidohydrolase activity","type":"related"},{"name":"acetylaminodeoxyglucosephosphate acetylhydrolase activity","type":"related"},{"name":"acetylglucosamine phosphate deacetylase activity","type":"related"}],"termid":"GO:0008448"}


id: PBO:0074532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA F","termid":"PBO:0074532"}


id: FYPO:0004142
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA binding at an RNA polymerase II proximal promoter by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene. An RNA polymerase II proximal promoter is a sequence of DNA that is in cis with and relatively close to a core promoter for RNA polymerase II.","definition_xrefs":["GO:0000978","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased double-stranded DNA binding","termid":"FYPO:0005018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased RNA polymerase II proximal promoter sequence-specific DNA binding","synonyms":[{"name":"decreased transcription factor binding to promoter region","type":"related"},{"name":"reduced RNA polymerase II proximal promoter sequence-specific DNA binding","type":"exact"}],"termid":"FYPO:0004142"}


id: PBO:0081528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 438","termid":"PBO:0081528"}


id: PBO:0067865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 167","termid":"PBO:0067865"}


id: MONDO:0022599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly anonychia","termid":"MONDO:0022599","xrefs":{"Monarch":{"xref_id":"0022599"}}}


id: MOD:01456
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue amino or imino group with a phosphono group (H2PO3 or 'phosphate').","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylated residue","termid":"MOD:00696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"N-phosphorylated residue","synonyms":[{"name":"NPhosRes","type":"exact"}],"termid":"MOD:01456"}


id: PBO:0034782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC delta-kleisin subunit Nse4","termid":"PBO:0034782"}


id: MONDO:0024280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An arthritis affecting five or more separate joints.","definition_xrefs":["NCIT:C26996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthritic joint disease","termid":"MONDO:0005578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyarticular arthritis","secondary_identifiers":["MEDGEN:56408","UMLS:C0162323","SCTID:416956002"],"synonyms":[{"name":"polyarthritis","type":"exact"},{"name":"polyarticular arthritis","type":"exact"}],"termid":"MONDO:0024280","xrefs":{"Monarch":{"xref_id":"0024280"}}}


id: PBO:0000569
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.2.3","termid":"PBO:0000569"}


id: PBO:0040040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen receptor negatively regulated lncRNA","termid":"PBO:0040040"}


id: PBO:0089418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L28","termid":"PBO:0089418"}


id: PR:Q10088
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.09 gene.","definition_xrefs":["UniProtKB:Q10088","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.09","synonyms":[{"name":"AUH 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC11D3.09","type":"exact"},{"name":"agmatine ureohydrolase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10088"}


id: GO:0015167
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an arabitol from one side of a membrane to the other. Arabitol is the pentitol derived from arabinose or lyxose by reduction of the aldehyde group. The D enantiomer is present in lichens and mushrooms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"polyol transmembrane transporter activity","termid":"GO:0015166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"arabitol transmembrane transporter activity","synonyms":[{"name":"arabinitol transporter activity","type":"exact"}],"termid":"GO:0015167"}


id: SO:0000070
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a gene when it is located within the intron of another gene and on the opposite strand.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inside_intron","termid":"SO:0000069"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inside_intron_antiparallel","synonyms":[{"name":"inside intron antiparallel","type":"exact"}],"termid":"SO:0000070"}


id: GO:0000935
data:
  {"annotated_genes":["SJAG_04901","SJAG_02166","SJAG_04322","SJAG_05001","SJAG_01171","SJAG_04668","SJAG_00442","SJAG_04690","SJAG_01196","SJAG_00667","SJAG_01453","SJAG_01456","SJAG_02169","SJAG_01855","SJAG_02916","SJAG_03705","SJAG_05285","SJAG_00610","SJAG_01290","SJAG_01754","SJAG_02379","SJAG_03453","SJAG_01774","SJAG_03581","SJAG_00669","SJAG_02222","SJAG_01835","SJAG_01799","SJAG_02022","SJAG_04776","SJAG_04771","SJAG_01888","SJAG_03655","SJAG_00514","SJAG_04666","SJAG_03704","SJAG_01718","SJAG_03379","SJAG_03753","SJAG_01787","SJAG_03748","SJAG_02215","SJAG_01181"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[69402,71900,73402,89365,89383,90135,90326,91600,92587,92616,92636,92712,94142,94274,94293,95440,95616,96469,97557,98773,101658,102109,102853,103868,103869,104572,105418,106606,108053,108228,112079,112959,113347,115066,116036,116374,118567,119900,119914],"is_not":false,"summary":null,"term":"GO:0000935"},{"annotations":[117819,65206,58678,102071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000936"}]},"cv_name":"cellular_component","definition":"A cell septum which forms as part of the division site and functions in the compartmentalization of a cell into two daughter cells at division. A division septum spans a cell and does not allow exchange of organelles or cytoplasm between compartments.","definition_xrefs":["GOC:vw","GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell septum","termid":"GO:0030428"},{"relation_name":"part_of","term_name":"cell division site","termid":"GO:0032153"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_00514":null,"SJAG_00610":null,"SJAG_00667":null,"SJAG_00669":null,"SJAG_01171":null,"SJAG_01181":null,"SJAG_01196":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01456":null,"SJAG_01718":null,"SJAG_01754":null,"SJAG_01774":null,"SJAG_01787":null,"SJAG_01799":null,"SJAG_01835":null,"SJAG_01855":null,"SJAG_01888":null,"SJAG_02022":null,"SJAG_02166":null,"SJAG_02169":null,"SJAG_02215":null,"SJAG_02222":null,"SJAG_02379":null,"SJAG_02916":null,"SJAG_03379":null,"SJAG_03453":null,"SJAG_03581":null,"SJAG_03655":null,"SJAG_03704":null,"SJAG_03705":null,"SJAG_03748":null,"SJAG_03753":null,"SJAG_04322":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04690":null,"SJAG_04771":null,"SJAG_04776":null,"SJAG_04901":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"division septum","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0043187"],"synonyms":[{"name":"cell septum surface","type":"related"},{"name":"complete septum","type":"exact"},{"name":"septum surface","type":"broad"}],"termid":"GO:0000935","terms_by_termid":{"GO:0000935":null,"GO:0000936":null}}


id: GO:0014852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle contraction by variation of the pattern of stimulation by nervous system.","definition_xrefs":["GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction","termid":"GO:0014819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle contraction by neural stimulation via neuromuscular junction","termid":"GO:0014852"}


id: PBO:0017034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase, RIO family Rio2 (predicted)","termid":"PBO:0017034"}


id: GO:0000733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The identification and annealing of complementary base pairs in single-strand DNA.","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA strand renaturation (obsolete GO:0000733)","termid":"GO:0000733"}


id: GO:0043640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of benzoate, by its hydroxylation to cis-1,2-dihydroxybenzoate followed by dehydrogenation to catechol.","definition_xrefs":["MetaCyc:PWY-2503","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzoate catabolic process","termid":"GO:0043639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"benzoate catabolic process via hydroxylation","synonyms":[{"name":"benzoate breakdown via hydroxylation","type":"exact"},{"name":"benzoate degradation via hydroxylation","type":"exact"}],"termid":"GO:0043640"}


id: GO:0019034
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Specific locations and structures in the virus infected cell involved in replicating the viral genome.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear part","termid":"GO:0044094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral replication complex","termid":"GO:0019034"}


id: MONDO:0030337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited cutis laxa","termid":"MONDO:0100237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutis laxa, autosomal recessive, type 2E","secondary_identifiers":["UMLS:C5561944","MEDGEN:1794154","OMIM:619451"],"synonyms":[{"name":"ARCL2E","type":"exact"},{"name":"cutis laxa, autosomal recessive, type 2E","type":"exact"},{"name":"cutis laxa, autosomal recessive, type IIE","type":"exact"}],"termid":"MONDO:0030337","xrefs":{"Monarch":{"xref_id":"0030337"}}}


id: GO:0102029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lactate + an ubiquinone = pyruvate + an ubiquinol.","definition_xrefs":["PMID:10944213","PMID:4575624","RHEA:51468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-lactate dehydrogenase activity","termid":"GO:0047809"},{"relation_name":"is_a","term_name":"(2R)-hydroxyacid dehydrogenase (quinone) activity","termid":"GO:1990464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D-lactate dehydrogenase (quinone) activity","secondary_identifiers":["EC:1.1.5.12","MetaCyc:DLACTDEHYDROGFAD-RXN"],"synonyms":[{"name":"D-lactate dehydrogenase activity","type":"broad"}],"termid":"GO:0102029"}


id: GO:0008615
data:
  {"annotated_genes":["SJAG_00283","SJAG_01881"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65180,77363],"is_not":false,"summary":null,"term":"GO:0008615"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyridoxine, 2-methyl-3-hydroxy-4,5-bis(hydroxymethyl)pyridine, one of the vitamin B6 compounds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxine metabolic process","termid":"GO:0008614"},{"relation_name":"is_a","term_name":"vitamin B6 biosynthetic process","termid":"GO:0042819"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00283":null,"SJAG_01881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyridoxine biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"pyridoxine anabolism","type":"exact"},{"name":"pyridoxine biosynthesis","type":"exact"},{"name":"pyridoxine formation","type":"exact"},{"name":"pyridoxine synthesis","type":"exact"}],"termid":"GO:0008615","terms_by_termid":{"GO:0008615":null}}


id: PBO:0087544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of ribosome-associated quality control trigger complex (RQT); the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0087544"}


id: GO:2000368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of acrosomal vesicle exocytosis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion-dependent exocytosis","termid":"GO:0045956"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"is_a","term_name":"regulation of acrosomal vesicle exocytosis","termid":"GO:2000367"},{"relation_name":"positively_regulates","term_name":"acrosomal vesicle exocytosis","termid":"GO:0060478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"positive regulation of acrosomal vesicle exocytosis","synonyms":[{"name":"positive regulation of acrosomal granule exocytosis","type":"related"},{"name":"positive regulation of acrosome exocytosis","type":"exact"}],"termid":"GO:2000368"}


id: GO:0048158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage in mammalian oogenesis when the primordial germ cell is hardly distinguishable from other cortical cells of the ovary.","definition_xrefs":["GOC:mtg_sensu","GOC:jid","ISBN:0198542771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammalian oogenesis stage","termid":"GO:0022605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oogonium stage","synonyms":[{"name":"mammalian oogenesis stage 1","type":"exact"}],"termid":"GO:0048158"}


id: MONDO:0005277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A common, severe type of vascular headache often associated with increased sympathetic activity, resulting in nausea, vomiting, and light sensitivity.","definition_xrefs":["NCIT:C89715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"hypnic headache","termid":"MONDO:0017181"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine disorder","secondary_identifiers":["UMLS:C0149931","MESH:D008881","ICD9:346.9","DOID:6364","MEDGEN:57451","ICD9:346"],"synonyms":[{"name":"migraine","type":"exact"},{"name":"migraine disorder","type":"exact"},{"name":"migraine headache","type":"exact"},{"name":"migraine variant","type":"exact"},{"name":"migraine with or without aura","type":"exact"}],"termid":"MONDO:0005277","xrefs":{"Monarch":{"xref_id":"0005277"}}}


id: GO:0009807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lignans, any member of a class of plant metabolites related to lignins. Lignans are usually found as phenylpropanoid dimers in which the phenylpropanoid units are linked tail to tail and thus having a 2,3 dibenzylbutane skeleton, but higher oligomers can also exist.","definition_xrefs":["PMID:10074466","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"lignan biosynthetic process","synonyms":[{"name":"lignan anabolism","type":"exact"},{"name":"lignan biosynthesis","type":"exact"},{"name":"lignan formation","type":"exact"},{"name":"lignan synthesis","type":"exact"}],"termid":"GO:0009807"}


id: GO:0009224
data:
  {"annotated_genes":["SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69601],"is_not":false,"summary":null,"term":"GO:0009224"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of CMP, cytidine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate biosynthetic process","termid":"GO:0009174"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide biosynthetic process","termid":"GO:0009220"},{"relation_name":"is_a","term_name":"CMP metabolic process","termid":"GO:0046035"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03708":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"CMP biosynthetic process","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"CMP anabolism","type":"exact"},{"name":"CMP biosynthesis","type":"exact"},{"name":"CMP formation","type":"exact"},{"name":"CMP synthesis","type":"exact"}],"termid":"GO:0009224","terms_by_termid":{"GO:0009224":null}}


id: PBO:0056169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MADCAM1 antisense RNA 1","termid":"PBO:0056169"}


id: GO:0009515
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Appressed thylakoid membranes that are part of a granum (stacked regions). A characteristic of these appressed regions is the preferential localization of photosystem II.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast thylakoid","termid":"GO:0009534"},{"relation_name":"part_of","term_name":"granum","termid":"GO:0009542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"granal stacked thylakoid","synonyms":[{"name":"chloroplast stacked thylakoid","type":"exact"}],"termid":"GO:0009515"}


id: PBO:0051747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 13","termid":"PBO:0051747"}


id: PBO:0071251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 92","termid":"PBO:0071251"}


id: PBO:0110418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYNE3 antisense RNA 1","termid":"PBO:0110418"}


id: PATO:0000343
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000343 gametophyte incompatible value (obsolete PATO:0000343)","termid":"PATO:0000343"}


id: PBO:0027474
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_silencing_at_telomere","termid":"PBO:0027474"}


id: PBO:0063273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 19 pseudogene","termid":"PBO:0063273"}


id: PBO:0079159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 18","termid":"PBO:0079159"}


id: PBO:0084273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein; required for sporulation and plasma membrane sphingolipid content; similar to SUR7; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; GFP-fusion protein is more abundant at MCCs (membrane compartment occupied by Can1) in the presence of glycerol and oleate; YNL194C has a paralog, FMP45, that arose from the whole genome duplication","termid":"PBO:0084273"}


id: PBO:0062561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AA member 1 pseudogene","termid":"PBO:0062561"}


id: PBO:0065136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-dependent X-linked catalytic subunit","termid":"PBO:0065136"}


id: PBO:0049034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 21","termid":"PBO:0049034"}


id: GO:2001003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pectin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"regulates","term_name":"pectin catabolic process","termid":"GO:0045490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of pectin catabolic process","synonyms":[{"name":"regulation of pectin breakdown","type":"exact"},{"name":"regulation of pectin catabolism","type":"exact"},{"name":"regulation of pectin degradation","type":"exact"}],"termid":"GO:2001003"}


