# terms

id: FYPO:0005244
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing arabinose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0002060","FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0002058"],"is_obsolete":false,"name":"decreased cell population growth on arabinose carbon source","synonyms":[{"name":"decreased growth on arabinose carbon source","type":"broad"},{"name":"decreased vegetative cell growth on arabinose carbon source","type":"exact"},{"name":"reduced cell growth on arabinose carbon source","type":"related"},{"name":"slow cell growth on arabinose carbon source","type":"narrow"}],"termid":"FYPO:0005244"}


id: PR:Q09700
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gep3 gene.","definition_xrefs":["UniProtKB:Q09700","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2F7.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F7.09c","synonyms":[{"name":"Spom972h-gep3","type":"exact"}],"termid":"PR:Q09700"}


id: GO:1902610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a N-phenylthiourea stimulus.","definition_xrefs":["GOC:TermGenie","PMID:24006265","GO_REF:0000071","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to N-phenylthiourea","termid":"GO:1902610"}


id: PBO:0075907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8SIA6 antisense RNA 1","termid":"PBO:0075907"}


id: PBO:0087353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Splicing factor; component of the U4/U6-U5 snRNP complex","termid":"PBO:0087353"}


id: PBO:0016093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation protein Csi1","termid":"PBO:0016093"}


id: MONDO:0000728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The drooping of the upper eyelid.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ptosis","secondary_identifiers":["MESH:D001763","SCTID:11934000","HP:0000508","DOID:0060260","MEDGEN:2287","ICD9:374.30","UMLS:C0005745","ICD9:374.3","NCIT:C27298"],"synonyms":[{"name":"blepharoptosis","type":"exact"},{"name":"drooping eyelid","type":"exact"},{"name":"eyelid ptosis","type":"exact"},{"name":"ptosis","type":"exact"},{"name":"ptosis (disease)","type":"exact"}],"termid":"MONDO:0000728","xrefs":{"Monarch":{"xref_id":"0000728"}}}


id: GO:0018895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dibenzothiophene, a substance composed of two benzene rings linked by one sulfide bond and one carbon-carbon bond. Dibenzothiophene derivatives can be detected in diesel oil following hydrodesulfurization treatment to remove sulfur compounds that would otherwise generate sulfur oxides during combustion.","definition_xrefs":["PMID:12147483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"dibenzothiophene metabolic process","synonyms":[{"name":"dibenzothiophene metabolism","type":"exact"},{"name":"diphenylene sulfide metabolic process","type":"exact"},{"name":"diphenylene sulfide metabolism","type":"exact"}],"termid":"GO:0018895"}


id: PR:O60170
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cationic amino acid transporter 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino-acid permease meu22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.06c","secondary_identifiers":["UniProtKB:O60170"],"synonyms":[{"name":"SPBC19F8.06c","type":"related"},{"name":"Spom972h-SLC7A3","type":"exact"},{"name":"meiotic expression up-regulated protein 22 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60170"}


id: FYPO:0000854
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning in regions of euchromatin is abnormal. Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["GO:0016584","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning","termid":"FYPO:0000853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000641"],"is_obsolete":false,"name":"abnormal nucleosome positioning in euchromatin","synonyms":[{"name":"abnormal nucleosome occupancy in euchromatin","type":"related"},{"name":"abnormal nucleosome positioning in euchromatin during mitotic cell cycle","type":"related"},{"name":"abnormal nucleosome positioning in euchromatin during vegetative growth","type":"exact"},{"name":"abnormal nucleosome spacing in euchromatin","type":"exact"}],"termid":"FYPO:0000854"}


id: PBO:0062029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily R member 1, pseudogene","termid":"PBO:0062029"}


id: MONDO:0010907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial hypertryptophanemia is characterized by intellectual deficit associated with behavioral problems: periodic mood swings, exaggerated affective responses and abnormal sexual behavior. Twelve cases have been reported so far. Congenital abnormalities in tryptophan metabolism appear to be responsible for the tryptophanemia and tryptophanuria.","definition_xrefs":["Orphanet:2224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of tryptophan metabolism","termid":"MONDO:0017350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"familial hypertryptophanemia","secondary_identifiers":["MEDGEN:419177","OMIM:600627","SCTID:721838005","GARD:2871","DOID:0111703","UMLS:C2931837","MESH:C538393"],"synonyms":[{"name":"HYPTRP","type":"related"},{"name":"familial hypertryptophanemia","type":"exact"},{"name":"hypertryptophanemia","type":"broad"},{"name":"hypertryptophanemia, familial","type":"related"}],"termid":"MONDO:0010907","xrefs":{"Monarch":{"xref_id":"0010907"}}}


id: PBO:0060882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neudesin neurotrophic factor pseudogene 3","termid":"PBO:0060882"}


id: PBO:0058856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8085","termid":"PBO:0058856"}


id: PR:Q9P7D6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP4H10.12 gene.","definition_xrefs":["UniProtKB:Q9P7D6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0303 protein P4H10.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.12","synonyms":[{"name":"Spom972h-SPBP4H10.12","type":"exact"}],"termid":"PR:Q9P7D6"}


id: MONDO:0023240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gigantism advanced bone age hoarse cry","termid":"MONDO:0023240","xrefs":{"Monarch":{"xref_id":"0023240"}}}


id: GO:0097387
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Simple or compound process of epithelial glial cells with a spherical head that inserts into photoreceptor axons. Capitate projections have only been observed in Brachycera (flies).","definition_xrefs":["GOC:mc","PMID:3098431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell projection","termid":"GO:0097386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"capitate projection","termid":"GO:0097387"}


id: PBO:0045616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 27 (pseudogene)","termid":"PBO:0045616"}


id: GO:0008018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete structural protein of chorion (sensu Drosophila) (obsolete GO:0008018)","synonyms":[{"name":"structural protein of chorion (sensu Drosophila)","type":"exact"}],"termid":"GO:0008018"}


id: GO:1903631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of aminoacyl-tRNA ligase activity.","definition_xrefs":["GO_REF:0000059","PMID:2280766","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of aminoacyl-tRNA ligase activity (obsolete GO:1903631)","synonyms":[{"name":"down regulation of aminoacyl-tRNA ligase activity","type":"exact"},{"name":"down regulation of aminoacyl-tRNA synthetase activity","type":"exact"},{"name":"down regulation of aminoacyl-tRNA synthetase auxiliary protein activity","type":"related"},{"name":"down-regulation of aminoacyl-tRNA ligase activity","type":"exact"},{"name":"down-regulation of aminoacyl-tRNA synthetase activity","type":"exact"},{"name":"down-regulation of aminoacyl-tRNA synthetase auxiliary protein activity","type":"related"},{"name":"downregulation of aminoacyl-tRNA ligase activity","type":"exact"},{"name":"downregulation of aminoacyl-tRNA synthetase activity","type":"exact"},{"name":"downregulation of aminoacyl-tRNA synthetase auxiliary protein activity","type":"related"},{"name":"inhibition of aminoacyl-tRNA ligase activity","type":"narrow"},{"name":"inhibition of aminoacyl-tRNA synthetase activity","type":"narrow"},{"name":"inhibition of aminoacyl-tRNA synthetase auxiliary protein activity","type":"related"},{"name":"negative regulation of aminoacyl-tRNA synthetase activity","type":"exact"},{"name":"negative regulation of aminoacyl-tRNA synthetase auxiliary protein activity","type":"related"}],"termid":"GO:1903631"}


id: PBO:0045190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB6 pseudogene 3","termid":"PBO:0045190"}


id: PBO:0028942
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_non-growing_cell_tip","termid":"PBO:0028942"}


id: PBO:0075712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRGAP3 antisense RNA 1","termid":"PBO:0075712"}


id: PBO:0039808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 4","termid":"PBO:0039808"}


id: PBO:0043716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B1 pseudogene 4","termid":"PBO:0043716"}


id: PBO:0017566
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Anencephaly","termid":"PBO:0017566"}


id: GO:0048083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of establishment of the adult pattern of pigmentation in the cuticle of an organism.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chitin-based cuticle tanning","termid":"GO:0045800"},{"relation_name":"is_a","term_name":"negative regulation of cuticle pigmentation","termid":"GO:0048080"},{"relation_name":"is_a","term_name":"regulation of adult chitin-containing cuticle pigmentation","termid":"GO:0048082"},{"relation_name":"negatively_regulates","term_name":"adult chitin-containing cuticle pigmentation","termid":"GO:0048085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of adult chitin-containing cuticle pigmentation","synonyms":[{"name":"down regulation of adult chitin-containing cuticle pigmentation","type":"exact"},{"name":"down-regulation of adult chitin-containing cuticle pigmentation","type":"exact"},{"name":"downregulation of adult chitin-containing cuticle pigmentation","type":"exact"},{"name":"inhibition of adult chitin-containing cuticle pigmentation","type":"narrow"}],"termid":"GO:0048083"}


id: GO:0030915
data:
  {"annotated_genes":["SJAG_03436","SJAG_01776","SJAG_00213","SJAG_05323","SJAG_04932","SJAG_01332","SJAG_02545","SJAG_03702"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71981,74261,76157,76203,77041,89898,113472,119874],"is_not":false,"summary":null,"term":"GO:0030915"}]},"cv_name":"cellular_component","definition":"A conserved complex that contains a heterodimer of SMC proteins (Smc5p and Smc6p, or homologs thereof) and several other proteins, and is involved in DNA repair and maintaining cell cycle arrest following DNA damage. In S. cerevisiae, this is an octameric complex called Mms21-Smc5-Smc6 complex, with at least five of its subunits conserved in fission yeast and humans.","definition_xrefs":["PMID:15738391","GOC:rb","PMID:14701739","PMID:27373152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO ligase complex","termid":"GO:0106068"},{"relation_name":"part_of","term_name":"condensed chromosome","termid":"GO:0000793"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00213":null,"SJAG_01332":null,"SJAG_01776":null,"SJAG_02545":null,"SJAG_03436":null,"SJAG_03702":null,"SJAG_04932":null,"SJAG_05323":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"Smc5-Smc6 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030915","terms_by_termid":{"GO:0030915":null}}


id: PBO:0057884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3188","termid":"PBO:0057884"}


id: FYPO:0003790
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein in a cell is normal (i.e. indistinguishable from wild type) during the first or second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiotic cell cycle","termid":"FYPO:0004095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization during meiosis","synonyms":[{"name":"normal protein localisation during meiosis","type":"exact"},{"name":"normal protein localization during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003790"}


id: PBO:0073685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 7","termid":"PBO:0073685"}


id: GO:0048067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of a pattern of pigment in the cuticle of an organism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental pigmentation","termid":"GO:0048066"},{"relation_name":"part_of","term_name":"cuticle development","termid":"GO:0042335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cuticle pigmentation","termid":"GO:0048067"}


id: GO:0090224
data:
  {"annotated_genes":["SJAG_00244","SJAG_02332","SJAG_00514","SJAG_04464"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[73200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901673"},{"annotations":[117052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110162"},{"annotations":[91744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060236"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the assembly, arrangement of constituent parts, or disassembly of the microtubule spindle.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of microtubule cytoskeleton organization","termid":"GO:0070507"},{"relation_name":"regulates","term_name":"spindle organization","termid":"GO:0007051"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_02332":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of spindle organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of spindle organisation","type":"exact"}],"termid":"GO:0090224","terms_by_termid":{"GO:0060236":null,"GO:0110161":null,"GO:0110162":null,"GO:1901673":null}}


id: GO:0042078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The self-renewing division of a germline stem cell to produce a daughter stem cell and a daughter germ cell, which will divide to form the gametes.","definition_xrefs":["GOC:jid","PMID:2279698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell division","termid":"GO:0017145"},{"relation_name":"part_of","term_name":"germ cell development","termid":"GO:0007281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ-line stem cell division","secondary_identifiers":["GO:0048131"],"synonyms":[{"name":"germ-line stem cell renewal","type":"exact"}],"termid":"GO:0042078"}


id: PBO:0073531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing GRB2 like 2, endophilin A1","termid":"PBO:0073531"}


id: PBO:0055813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipin 1","termid":"PBO:0055813"}


id: PR:Q9UU93
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A calcineurin subunit B type 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04978","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcineurin subunit B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC830.06","secondary_identifiers":["UniProtKB:Q9UU93"],"synonyms":[{"name":"Spom972h-PPP3R1","type":"exact"},{"name":"calcineurin regulatory subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protein phosphatase 2B regulatory subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UU93"}


id: GO:0051332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase, following G1, during which DNA synthesis takes place as part of a meiotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S phase","termid":"GO:0051320"},{"relation_name":"part_of","term_name":"meiotic interphase","termid":"GO:0051328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0051328"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051328","GO:0008150"],"is_obsolete":false,"name":"meiotic S phase","synonyms":[{"name":"S phase of meiotic cell cycle","type":"exact"},{"name":"S-phase of meiotic cell cycle","type":"exact"},{"name":"premeiotic S-phase","type":"exact"}],"termid":"GO:0051332"}


id: MONDO:0859367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 96","secondary_identifiers":["OMIM:620228","UMLS:C5774303","MEDGEN:1824076"],"termid":"MONDO:0859367","xrefs":{"Monarch":{"xref_id":"0859367"}}}


id: PBO:0000641
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swi/Snf RSC","termid":"PBO:0000641"}


id: MONDO:0003342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign mesenchymal neoplasm arising from the perivascular cells of the connective and soft tissues. It is characterized by the presence of pericytes that grow in a circumferential pattern around vessels.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cardiovascular organ benign neoplasm","termid":"MONDO:0000629"},{"relation_name":"is_a","term_name":"pericytic neoplasm","termid":"MONDO:0002604"},{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign perivascular tumor","secondary_identifiers":["UMLS:C1332532","MEDGEN:231437","DOID:5238","NCIT:C6529"],"synonyms":[{"name":"benign Pericytic neoplasm","type":"exact"},{"name":"benign Pericytic tumor","type":"exact"},{"name":"benign Pericytic tumour","type":"exact"},{"name":"benign pericytic neoplasm","type":"exact"},{"name":"benign perivascular neoplasm","type":"exact"},{"name":"benign perivascular tumor","type":"exact"},{"name":"pericytic neoplasm, benign","type":"exact"}],"termid":"MONDO:0003342","xrefs":{"Monarch":{"xref_id":"0003342"}}}


id: GO:0106350
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E)-farnesyl diphosphate + 5 isopentenyl diphosphate = 5 diphosphate + all-trans-octaprenyl diphosphate.","definition_xrefs":["RHEA:27798","PMID:8037730","PMID:3519603"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyl diphosphate synthase activity","termid":"GO:0120531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016765","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"all-trans-octaprenyl-diphosphate synthase activity","secondary_identifiers":["EC:2.5.1.90"],"synonyms":[{"name":"octaprenyl pyrophosphate synthase activity","type":"exact"},{"name":"terpenyl pyrophosphate synthetase activity","type":"broad"},{"name":"trans-heptaprenyltranstransferase activity","type":"exact"},{"name":"trans-prenyltransferase activity","type":"broad"}],"termid":"GO:0106350"}


id: GO:0071035
data:
  {"annotated_genes":["SJAG_04321","SJAG_04006","SJAG_00854","SJAG_04818","SJAG_03179","SJAG_01818","SJAG_04153","SJAG_03984","SJAG_04084","SJAG_01191","SJAG_01176","SJAG_03745","SJAG_04824","SJAG_01521"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65818,72028,72373,73081,73376,74203,76840,79460,99155,104014,108425,109418,117449,117889],"is_not":false,"summary":null,"term":"GO:0071035"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the nucleus and resulting in the breakdown of a ribosomal RNA (rRNA) molecule, including RNA fragments released as part of processing the primary transcript into multiple mature rRNA species, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target rRNA.","definition_xrefs":["PMID:15173578","PMID:15572680","PMID:15935758","GOC:krc","GOC:dgf","PMID:17652137","PMID:18591258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_03984":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear polyadenylation-dependent rRNA catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"nuclear poly(A)-dependent rRNA catabolic process","type":"related"}],"termid":"GO:0071035","terms_by_termid":{"GO:0071035":null}}


id: PBO:0058370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4742","termid":"PBO:0058370"}


id: GO:0097374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a sensory neuron is directed to a specific target site in response to a combination of attractive and repulsive cues. A sensory neuron is an afferent neuron conveying sensory impulses.","definition_xrefs":["GOC:pr","CL:0000101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory neuron axon guidance","termid":"GO:0097374"}


id: PR:Q9Y7S3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC569.04 gene.","definition_xrefs":["UniProtKB:Q9Y7S3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C569.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC569.04","synonyms":[{"name":"Spom972h-SPCC569.04","type":"exact"}],"termid":"PR:Q9Y7S3"}


id: GO:0120086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = diphosphate + (3S)-(+)-asterisca-2(9),6-diene.","definition_xrefs":["PMID:27862766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"(3S)-(+)-asterisca-2(9),6-diene synthase activity","synonyms":[{"name":"asterisca-2(9),6-diene synthase activity","type":"broad"}],"termid":"GO:0120086"}


id: GO:1905596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of low-density lipoprotein particle receptor binding.","definition_xrefs":["PMID:22848640","GO_REF:0000059","GOC:BHF","GOC:nc","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of low-density lipoprotein particle receptor binding (obsolete GO:1905596)","synonyms":[{"name":"down regulation of LDL receptor binding","type":"exact"},{"name":"down regulation of low-density lipoprotein particle receptor binding","type":"exact"},{"name":"down regulation of low-density lipoprotein receptor binding","type":"exact"},{"name":"down-regulation of LDL receptor binding","type":"exact"},{"name":"down-regulation of low-density lipoprotein particle receptor binding","type":"exact"},{"name":"down-regulation of low-density lipoprotein receptor binding","type":"exact"},{"name":"downregulation of LDL receptor binding","type":"exact"},{"name":"downregulation of low-density lipoprotein particle receptor binding","type":"exact"},{"name":"downregulation of low-density lipoprotein receptor binding","type":"exact"},{"name":"inhibition of LDL receptor binding","type":"narrow"},{"name":"inhibition of low-density lipoprotein particle receptor binding","type":"narrow"},{"name":"inhibition of low-density lipoprotein receptor binding","type":"narrow"},{"name":"negative regulation of LDL receptor binding","type":"exact"},{"name":"negative regulation of low-density lipoprotein receptor binding","type":"exact"}],"termid":"GO:1905596"}


id: GO:0047729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carnitine + H+ = 2-methylcholine + CO2.","definition_xrefs":["EC:4.1.1.42","RHEA:21576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"carnitine decarboxylase activity","secondary_identifiers":["MetaCyc:CARNITINE-DECARBOXYLASE-RXN","KEGG_REACTION:R02398"],"synonyms":[{"name":"carnitine carboxy-lyase (2-methylcholine-forming)","type":"related"},{"name":"carnitine carboxy-lyase activity","type":"related"}],"termid":"GO:0047729"}


id: PBO:0029252
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_actomyosin_contractile_ring_assembly,_clumped_medial_cortical_nodes","termid":"PBO:0029252"}


id: PBO:0088896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis RNA-binding protein Mrd1","termid":"PBO:0088896"}


id: GO:0072670
data:
  {"annotated_genes":["SJAG_04700","SJAG_00865"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77245,120649],"is_not":false,"summary":null,"term":"GO:0072670"}]},"cv_name":"biological_process","definition":"The attachment of a carbonyl group and a threonine to the amino group of the adenine residue immediately 3' of the anticodon, in mitochondrial tRNAs that decode ANN codons (where N is any base).","definition_xrefs":["PMID:21183954","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA threonylcarbamoyladenosine modification","termid":"GO:0002949"},{"relation_name":"is_a","term_name":"mitochondrial tRNA modification","termid":"GO:0070900"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00865":null,"SJAG_04700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0010467","GO:0140053","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"mitochondrial tRNA threonylcarbamoyladenosine modification","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial tRNA t6A modification","type":"exact"}],"termid":"GO:0072670","terms_by_termid":{"GO:0072670":null}}


id: PBO:0081344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 146","termid":"PBO:0081344"}


id: MONDO:0000923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pathologic accumulation of air in the interstitium of the lungs, which is caused by the rupture of alveoli and terminal bronchioles, and is most often seen in premature infants that need mechanical ventilation for respiratory distress syndrome.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary emphysema","termid":"MONDO:0004849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interstitial emphysema","secondary_identifiers":["UMLS:C1370824","DOID:10030","ICD9:518.1","SCTID:77690003","icd11.foundation:2008095771","NCIT:C34571","ICD10CM:J98.2","MEDGEN:234586"],"synonyms":[{"name":"PIE","type":"exact"},{"name":"interstitial emphysema of lung","type":"exact"},{"name":"pie","type":"exact"},{"name":"pulmonary interstitial emphysema","type":"exact"}],"termid":"MONDO:0000923","xrefs":{"Monarch":{"xref_id":"0000923"}}}


id: PR:O94339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug96 gene.","definition_xrefs":["UniProtKB:O94339","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 96 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.06c","synonyms":[{"name":"Spom972h-mug96","type":"exact"}],"termid":"PR:O94339"}


id: PBO:0060400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 binding protein 3","termid":"PBO:0060400"}


id: GO:0080097
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tryptophan + pyruvate = 3-(indol-3-yl)pyruvate + L-alanine.","definition_xrefs":["RHEA:27586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-tryptophan aminotransferase activity","termid":"GO:0070529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"L-tryptophan:pyruvate aminotransferase activity","secondary_identifiers":["EC:2.6.1.99","MetaCyc:RXN-10139"],"termid":"GO:0080097"}


id: PBO:0005179
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinocerebellar ataxia","termid":"PBO:0005179"}


id: PBO:0065150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 2","termid":"PBO:0065150"}


id: PBO:0043775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase A1","termid":"PBO:0043775"}


id: PBO:0028391
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glyoxalase_III_activity","termid":"PBO:0028391"}


id: PBO:0109614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitic acid regulated anti-inflammatory lncRNA","termid":"PBO:0109614"}


id: MONDO:0032696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited oocyte maturation defect","termid":"MONDO:0014769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oocyte maturation defect 6","secondary_identifiers":["MEDGEN:1682649","OMIM:618353","UMLS:C5193047"],"synonyms":[{"name":"OOCYTE MATURATION DEFECT 6","type":"related"},{"name":"OOMD6","type":"related"}],"termid":"MONDO:0032696","xrefs":{"Monarch":{"xref_id":"0032696"}}}


id: PBO:0038628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical chemokine receptor 4","termid":"PBO:0038628"}


id: PBO:0066776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 74","termid":"PBO:0066776"}


id: FYPO:0004178
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell of the h+ mating type when the cell is subject to nitrogen starvation is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah","PMID:8668157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during nitrogen starvation","termid":"FYPO:0002020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased RNA level during nitrogen starvation in h+ cells","synonyms":[{"name":"increased RNA accumulation during nitrogen starvation in h+ cells","type":"related"},{"name":"increased RNA level during nitrogen depletion in h+ cells","type":"exact"},{"name":"increased RNA level during nitrogen deprivation in h+ cells","type":"exact"},{"name":"increased transcript level during nitrogen starvation in h+ cells","type":"exact"}],"termid":"FYPO:0004178"}


id: PBO:0081462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 331","termid":"PBO:0081462"}


id: PBO:0052291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KHDC1 antisense RNA 1","termid":"PBO:0052291"}


id: GO:1900419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alcohol catabolic process within a cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"alcohol catabolic process","termid":"GO:0046164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of alcohol catabolic process","termid":"GO:1900419"}


id: MONDO:0044347
data:
  {"annotated_genes":["SJAG_04217","SJAG_03929","SJAG_02796","SJAG_00839","SJAG_04495","SJAG_01351","SJAG_00988","SJAG_01162","SJAG_04334","SJAG_02297","SJAG_00235"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"},{"annotations":[87732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009259"},{"annotations":[88042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009284"},{"annotations":[88014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[88705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019531"},{"annotations":[87815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009606"},{"annotations":[87362,87361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009605"},{"annotations":[88297,88296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009340"},{"annotations":[87424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"}]},"cv_name":"mondo","definition":"A disease or disorder that involves the erythrocyte.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00235":null,"SJAG_00839":null,"SJAG_00988":null,"SJAG_01162":null,"SJAG_01351":null,"SJAG_02297":null,"SJAG_02796":null,"SJAG_03929":null,"SJAG_04217":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"erythrocyte disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0221016","ICD9:289.9","MEDGEN:526127","SCTID:38292009"],"synonyms":[{"name":"disease of erythrocyte","type":"exact"},{"name":"disease or disorder of erythrocyte","type":"exact"},{"name":"disorder of erythrocyte","type":"exact"},{"name":"erythrocyte disease","type":"exact"},{"name":"erythrocyte disease or disorder","type":"exact"},{"name":"red blood cell disease","type":"exact"},{"name":"red blood cell disorder","type":"exact"}],"termid":"MONDO:0044347","terms_by_termid":{"MONDO:0009259":null,"MONDO:0009284":null,"MONDO:0009340":null,"MONDO:0009605":null,"MONDO:0009606":null,"MONDO:0009950":null,"MONDO:0010480":null,"MONDO:0013275":null,"MONDO:0019531":null},"xrefs":{"Monarch":{"xref_id":"0044347"}}}


id: FYPO:0004208
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of H3-K4 specific histone methyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methyltransferase activity","termid":"FYPO:0004783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0005447","FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000641","FYPO:0000002"],"is_obsolete":false,"name":"abnormal histone methyltransferase activity (H3-K4 specific)","synonyms":[{"name":"abnormal H3-K4 specific histone methyltransferase activity","type":"exact"}],"termid":"FYPO:0004208"}


id: PBO:0004284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit Orc6","termid":"PBO:0004284"}


id: PBO:0068207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 514","termid":"PBO:0068207"}


id: PBO:0040782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bet1 golgi vesicular membrane trafficking protein pseudogene 1","termid":"PBO:0040782"}


id: MONDO:0011929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chromosomal anomaly characterized by distinctive facial dysmorphic features, hypotonia, developmental delay, intellectual disability, seizures, heart defects, hearing impairment and prenatal onset growth deficiency.","definition_xrefs":["Orphanet:1606"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome associated with dilated cardiomyopathy (obsolete MONDO:0016337)","termid":"MONDO:0016337"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 1","termid":"MONDO:0016883"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1p36 deletion syndrome","secondary_identifiers":["SCTID:699306003","DECIPHER:18","DOID:0060410","NANDO:1200682","NCIT:C74983","MEDGEN:334629","ICD9:758.39","UMLS:C1842870","OMIM:607872","MESH:C535362","GARD:6082"],"synonyms":[{"name":"1p telomere deletion syndrome","type":"exact"},{"name":"1p36 deletion syndrome","type":"exact"},{"name":"1p36 microdeletion syndrome","type":"exact"},{"name":"Del(1)(p36)","type":"exact"},{"name":"chromosome 1p36 deletion syndrome","type":"exact"},{"name":"chromosome 1p36 deletion syndrome, distal, isolated cases","type":"exact"},{"name":"deletion 1p36","type":"exact"},{"name":"deletion 1pter","type":"exact"},{"name":"monosomy 1P36 syndrome","type":"related"},{"name":"monosomy 1p36","type":"exact"},{"name":"monosomy 1pter","type":"exact"},{"name":"subtelomeric 1p36 deletion","type":"exact"}],"termid":"MONDO:0011929","xrefs":{"Monarch":{"xref_id":"0011929"}}}


id: MONDO:0009471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary intrinsic factor deficiency","termid":"MONDO:0009852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280","MONDO:0005066"],"is_obsolete":false,"name":"intrinsic factor and r binder, combined congenital deficiency of","secondary_identifiers":["OMIM:243320","MESH:C565461","GARD:15190","MEDGEN:340942","UMLS:C1855721"],"synonyms":[{"name":"intrinsic factor and r binder, combined congenital deficiency of","type":"exact"}],"termid":"MONDO:0009471","xrefs":{"Monarch":{"xref_id":"0009471"}}}


id: MONDO:1010117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The sudden unexpected death of a person age 1 to 18 years that remains unexplained after a thorough case investigation, including performance of a complete autopsy with ancillary testing, and review of the clinical history and circumstances of death.","definition_xrefs":["PMID:31502215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sudden unexpected death in pediatrics","termid":"MONDO:1010120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sudden unexplained death in childhood","secondary_identifiers":["MEDGEN:820021","UMLS:C3827273"],"termid":"MONDO:1010117","xrefs":{"Monarch":{"xref_id":"1010117"}}}


id: PBO:0002347
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"faster-evolving copy","termid":"PBO:0002347"}


id: PR:000037296
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase cds1 in Schizosaccharomyces pombe that has been phosphorylated on the Thr residue in the second TQ motif by rad3. Example: UniProtKB:Q09170, Thr-11, MOD:00047.","definition_xrefs":["PMID:15173168","PomBase:AL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine-protein kinase cds1 (Schizosaccharomyces pombe)","termid":"PR:000030002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cds1/Phos:(T11)","pombase_gene_id":"SPCC18B5.11c","synonyms":[{"name":"PomBase_original_PRO_term_name: serine/threonine-protein kinase cds1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-CHEK2/Phos:1","type":"exact"},{"name":"cds1/Phos:(T11)","type":"exact"}],"termid":"PR:000037296"}


id: GO:1905428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of plant organ formation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"plant organ formation","termid":"GO:1905393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of plant organ formation","termid":"GO:1905428"}


id: MONDO:0043287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Obstruction of the blood flow in the superior vena cava caused by a malignant neoplasm, thrombosis, or aneurysm. It is a medical emergency requiring immediate treatment. Signs and symptoms include swelling and cyanosis of the face, neck, and upper arms, cough, orthopnea, and headache.","definition_xrefs":["NCIT:C3396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superior vena cava syndrome","secondary_identifiers":["MESH:D013479","UMLS:C0038833","MEDGEN:52576","SCTID:63363004"],"synonyms":[{"name":"SVC obstruction","type":"related"},{"name":"SVC syndrome","type":"related"},{"name":"SVCS","type":"related"},{"name":"superior vena cava obstruction","type":"related"},{"name":"superior vena cava syndrome","type":"exact"},{"name":"superior vena cava thrombosis","type":"related"}],"termid":"MONDO:0043287","xrefs":{"Monarch":{"xref_id":"0043287"}}}


id: MONDO:0800135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any interstitial lung disease specific to childhood caused by a loss-of-function variation in the FLNA gene. Female children are reported more often. Rare male patients with loss-of-function FLNA mutation-associated lung disease with residual protein function can survive into infancy with a severe form of the phenotype.","definition_xrefs":["PMID:33734874","PMID:30922288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease specific to childhood","termid":"MONDO:0017014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital emphysematous lung disease due to Filamin A loss-of-function variant","termid":"MONDO:0800135","xrefs":{"Monarch":{"xref_id":"0800135"}}}


id: PBO:0114490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyl-coA synthetase isoform; along with Acs2p, acetyl-CoA synthetase isoform is the nuclear source of acetyl-coA for histone acetylation; expressed during growth on nonfermentable carbon sources and under aerobic conditions; metabolites mediate the formation of filament assemblies in meiotic cells, storing Acs1p in an inactive state and promoting efficient return to growth after starvation","termid":"PBO:0114490"}


id: PBO:0076302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYNGAP1 antisense RNA 1","termid":"PBO:0076302"}


id: GO:0046563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: O2 + methanol = H2O2 + formaldehyde.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete methanol oxidase activity (obsolete GO:0046563)","termid":"GO:0046563"}


id: FYPO:0005040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of the serine residue at position 2 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation.","definition_xrefs":["GO:0071620","PomBase:mah","PMID:22144909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during nitrogen starvation","termid":"FYPO:0005035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during nitrogen starvation","synonyms":[{"name":"normal phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during nitrogen deprivation","type":"exact"},{"name":"normal phosphorylation of RNA polymerase II CTD serine 2 residues during nitrogen depletion","type":"exact"}],"termid":"FYPO:0005040"}


id: GO:0106409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',3'-c-di-AMP + H2O = 5'-O-phosphonoadenylyl-(3'-5')-adenosine + H+.","definition_xrefs":["PMID:21909268","RHEA:54420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"cyclic-di-AMP phosphodiesterase activity","secondary_identifiers":["MetaCyc:RXN-19814","EC:3.1.4.59"],"termid":"GO:0106409"}


id: PBO:0027555
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiosis_II","termid":"PBO:0027555"}


id: PBO:0087372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Squalene epoxidase; catalyzes the epoxidation of squalene to 2,3-oxidosqualene; plays an essential role in the ergosterol-biosynthesis pathway and is the specific target of the antifungal drug terbinafine; human SQLE functionally complements the lethality of the erg1 null mutation","termid":"PBO:0087372"}


id: GO:0120556
data:
  {"annotated_genes":["SJAG_02056"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047874"}]},"cv_name":"molecular_function","definition":"Catalysis of the dephosphorylation of polyprenyl diphosphates.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid diphosphate phosphatase activity","termid":"GO:0106405"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02056":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"polyprenyl diphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0120556","terms_by_termid":{"GO:0047874":null}}


id: PBO:0113511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type I transmembrane sorting receptor for multiple vacuolar hydrolases; plays role in post-ER quality control in the Golgi, involved in protein targeting from the endoplasmic reticulum to the vacuole for degradation; cycles between late-Golgi and prevacuolar endosome-like compartments; targeted to vacuole via AP-3 pathway","termid":"PBO:0113511"}


id: PBO:0089762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,6- mannanase","termid":"PBO:0089762"}


id: GO:1902618
data:
  {"annotated_genes":["SJAG_01973"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115737],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140114"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fluoride stimulus.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:8138152","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to fluoride","termid":"GO:1902617"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to fluoride","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902618","terms_by_termid":{"GO:0140114":null}}


id: MONDO:0859001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete CPE-related Prader-Willi-like syndrome (obsolete MONDO:0859001)","termid":"MONDO:0859001","xrefs":{"Monarch":{"xref_id":"0859001"}}}


id: PBO:0004863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin (predicted)","termid":"PBO:0004863"}


id: MONDO:0012682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary predisposition to infections in which the cause of the disease is a mutation in the TYK2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 35","secondary_identifiers":["DOID:0111989","OMIM:611521","UMLS:C1969086","MESH:C566928","GARD:17514","Orphanet:331226","MEDGEN:409751"],"synonyms":[{"name":"HIES with atypical Mycobacteriosis, autosomal recessive","type":"exact"},{"name":"IMD35","type":"exact"},{"name":"TYK2 autosomal recessive mendelian susceptibility to mycobacterial diseases due to a partial deficiency","type":"exact"},{"name":"TYK2 deficiency","type":"exact"},{"name":"autosomal recessive hyper-IgE syndrome due to TYK2 deficiency","type":"exact"},{"name":"autosomal recessive mendelian susceptibility to mycobacterial diseases due to a partial deficiency caused by mutation in TYK2","type":"exact"},{"name":"hyper-IgE syndrome with atypical Mycobacteriosis, autosomal recessive","type":"exact"},{"name":"immunodeficiency 35","type":"exact"},{"name":"immunodeficiency type 35","type":"exact"},{"name":"susceptibility to infection due to TYK2 deficiency","type":"exact"},{"name":"tyrosine kinase 2 deficiency","type":"exact"}],"termid":"MONDO:0012682","xrefs":{"Monarch":{"xref_id":"0012682"}}}


id: PBO:0112851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous replication autosomal RNA 15-1","termid":"PBO:0112851"}


id: FYPO:0001130
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"},{"relation_name":"is_a","term_name":"increased protein localization to nucleus","termid":"FYPO:0004456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to nucleus during vegetative growth","synonyms":[{"name":"increased protein localisation to nucleus during vegetative growth","type":"exact"},{"name":"increased protein localization to nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001130"}


id: GO:0006989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete unfolded protein response, ligation of mRNA encoding UFP-specific transcription factor by RNA ligase (obsolete GO:0006989)","synonyms":[{"name":"unfolded protein response, ligation of mRNA encoding UFP-specific transcription factor by RNA ligase","type":"exact"}],"termid":"GO:0006989"}


id: PBO:0071171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 11","termid":"PBO:0071171"}


id: PBO:0068314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF14 pseudogene 2","termid":"PBO:0068314"}


id: MONDO:1010596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperthyroidism that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperthyroidism, non-human animal","termid":"MONDO:1010055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperthyroidism, horse","secondary_identifiers":["OMIA:000511-9796"],"termid":"MONDO:1010596","xrefs":{"Monarch":{"xref_id":"1010596"}}}


id: PR:Q10306
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A citrate synthase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00965","PRO:DNx","PANTHER:PTHR11739:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citrate synthase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6C3.04","secondary_identifiers":["UniProtKB:Q10306"],"synonyms":[{"name":"Spom972h-CS","type":"exact"}],"termid":"PR:Q10306"}


id: PR:Q9C0Y2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB2C8.01 gene.","definition_xrefs":["UniProtKB:Q9C0Y2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell agglutination protein PB2C8.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB2C8.01","synonyms":[{"name":"Spom972h-SPAPB2C8.01","type":"exact"}],"termid":"PR:Q9C0Y2"}


id: PBO:0031744
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_intracellular_transport","termid":"PBO:0031744"}


id: MONDO:0957196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A histone mutated tumor that is characterized by the presence of histone H3 K27M mutation located throughout the midline structures of the central nervous system.","definition_xrefs":["DOID:0080684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse intrinsic pontine glioma","termid":"MONDO:0006033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"diffuse midline glioma, H3 K27M-mutant","secondary_identifiers":["MEDGEN:927220","NCIT:C129309","UMLS:C4289688"],"termid":"MONDO:0957196","xrefs":{"Monarch":{"xref_id":"0957196"}}}


id: PBO:0078047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 37","termid":"PBO:0078047"}


id: PBO:0049200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIK1 antisense RNA 1","termid":"PBO:0049200"}


id: PBO:0002410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor zf-C2H2 type (predicted)","termid":"PBO:0002410"}


id: PBO:0061596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotensin receptor 2","termid":"PBO:0061596"}


id: GO:0097596
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A partial left-handed spiral array of microtubules that lies generally dorsal to the main ventral disc microtubule array in Giardia species (trophozoite stage).","definition_xrefs":["ISBN:9780124260207","GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ventral disc","termid":"GO:0097597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ventral disc supernumerary microtubule array","synonyms":[{"name":"supernumerary microtubule array","type":"broad"},{"name":"ventral disk supernumerary microtubule array","type":"related"}],"termid":"GO:0097596"}


id: MONDO:0008866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive form of bifid nose.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bifid nose","termid":"MONDO:0000110"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"bifid nose, autosomal recessive","secondary_identifiers":["GARD:15142","MEDGEN:854359","UMLS:C3887497","OMIM:210400"],"synonyms":[{"name":"Nose, Median cleft of","type":"related"},{"name":"autosomal recessive bifid nose","type":"exact"},{"name":"bifid nose, autosomal recessive","type":"exact"},{"name":"median fissure of Nose","type":"related"}],"termid":"MONDO:0008866","xrefs":{"Monarch":{"xref_id":"0008866"}}}


id: PBO:0029647
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_nucleus_during_cellular_response_to_copper_ion","termid":"PBO:0029647"}


id: PATO:0001954
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being linear, very narrow, tapering to a very fine point from a narrow base.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"linear","termid":"PATO:0001199"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subulate","synonyms":[{"name":"awl-shaped","type":"exact"},{"name":"needle-like","type":"exact"}],"termid":"PATO:0001954"}


id: PBO:0045251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal light chain 1","termid":"PBO:0045251"}


id: PBO:0035923
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_number_of_Rad52_foci_during_mitotic_S_phase","termid":"PBO:0035923"}


id: GO:0060366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the lambdoid suture is generated and organized.","definition_xrefs":["GOC:dph","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial suture morphogenesis","termid":"GO:0060363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lambdoid suture morphogenesis","termid":"GO:0060366"}


id: GO:0090093
data:
  {"annotated_genes":["SJAG_04666","SJAG_04771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94302,89369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fungal-type cell wall beta-glucan biosynthesis, the chemical reactions and pathways resulting in the formation of beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of fungal cells.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall macromolecule metabolic process","termid":"GO:0010981"},{"relation_name":"is_a","term_name":"regulation of beta-glucan biosynthetic process","termid":"GO:0032951"},{"relation_name":"is_a","term_name":"regulation of fungal-type cell wall biogenesis","termid":"GO:0032995"},{"relation_name":"regulates","term_name":"fungal-type cell wall beta-glucan biosynthetic process","termid":"GO:0070880"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04666":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0071554"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0071554","GO:0044085"],"is_obsolete":false,"name":"regulation of fungal-type cell wall beta-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090093","terms_by_termid":{"GO:0140748":null}}


id: GO:0043337
data:
  {"annotated_genes":["SJAG_04317"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94925],"is_not":false,"summary":null,"term":"GO:0043337"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-diacylglycerol + phosphatidylglycerol = CMP + diphosphatidylglycerol.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidyltransferase activity","termid":"GO:0030572"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04317":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016780","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cardiolipin synthase (CMP-forming)","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1483063","RHEA:32931","EC:2.7.8.41","MetaCyc:RXN-8141"],"synonyms":[{"name":"CDP-diacylglycerol-phosphatidylglycerol phosphatidyltransferase activity","type":"exact"},{"name":"cardiolipin synthase","type":"broad"},{"name":"cardiolipin synthetase","type":"broad"}],"termid":"GO:0043337","terms_by_termid":{"GO:0043337":null}}


id: PBO:0056669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 7","termid":"PBO:0056669"}


id: PBO:0055406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2836","termid":"PBO:0055406"}


id: GO:0032083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops or reduces the rate of type IV restriction endodeoxyribonuclease activity.","definition_xrefs":["GOC:tb","GOC:mah","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of type IV site-specific deoxyribonuclease activity (obsolete GO:0032083)","synonyms":[{"name":"down regulation of type IV restriction endodeoxyribonuclease activity","type":"exact"},{"name":"down-regulation of type IV restriction endodeoxyribonuclease activity","type":"exact"},{"name":"downregulation of type IV restriction endodeoxyribonuclease activity","type":"exact"},{"name":"inhibition of type IV restriction endodeoxyribonuclease activity","type":"narrow"},{"name":"negative regulation of type IV restriction endodeoxyribonuclease activity","type":"exact"},{"name":"type IV restriction endodeoxyribonuclease inhibitor","type":"related"},{"name":"type IV restriction enzyme inhibitor","type":"related"}],"termid":"GO:0032083"}


id: GO:0019100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of sex and sexual phenotype in a male organism's germ line.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary sex determination, germ-line","termid":"GO:0007542"},{"relation_name":"is_a","term_name":"germ-line sex determination","termid":"GO:0018992"},{"relation_name":"is_a","term_name":"male sex determination","termid":"GO:0030238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male germ-line sex determination","termid":"GO:0019100"}


id: PBO:0090232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myo-inositol transmembrane transporter","termid":"PBO:0090232"}


id: GO:0003429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a chondrocyte in the growth plate cartilage are generated and organized.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chondrocyte morphogenesis involved in endochondral bone morphogenesis","termid":"GO:0003414"},{"relation_name":"is_a","term_name":"growth plate cartilage morphogenesis","termid":"GO:0003422"},{"relation_name":"part_of","term_name":"growth plate cartilage chondrocyte differentiation","termid":"GO:0003418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth plate cartilage chondrocyte morphogenesis","termid":"GO:0003429"}


id: PBO:0044151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD nuclear envelope phosphatase 1","termid":"PBO:0044151"}


id: FYPO:0004505
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleolar chromatin organization is abnormal.","definition_xrefs":["PMID:18362178","GO:1990700","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleolus organization","termid":"FYPO:0000814"},{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal nucleolar chromatin organization","synonyms":[{"name":"abnormal chromatin organization at nucleolus","type":"related"},{"name":"abnormal nucleolar chromatin organisation","type":"exact"},{"name":"abnormal nucleolar chromatin organization during mitotic cell cycle","type":"related"},{"name":"abnormal nucleolar chromatin organization during vegetative growth","type":"exact"}],"termid":"FYPO:0004505"}


id: GO:0072570
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ADP-D-ribose, an ADP-aldose having ribose as the aldose fragment.","definition_xrefs":["GOC:mah","GOC:sart","PMID:20088964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"},{"relation_name":"is_a","term_name":"nucleoside phosphate binding","termid":"GO:1901265"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ADP-D-ribose binding","synonyms":[{"name":"ADP-ribose binding","type":"broad"}],"termid":"GO:0072570"}


id: PBO:0034352
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-evolutionary_variant_of","termid":"PBO:0034352"}


id: GO:1905413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dense core granule exocytosis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18468511","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion-dependent exocytosis","termid":"GO:0017158"},{"relation_name":"regulates","term_name":"dense core granule exocytosis","termid":"GO:1990504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"regulation of dense core granule exocytosis","synonyms":[{"name":"regulation of dense core vesicle exocytosis","type":"exact"}],"termid":"GO:1905413"}


id: PBO:0029050
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_degradation_during_nitrogen_starvation","termid":"PBO:0029050"}


id: PBO:0003770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor (predicted)","termid":"PBO:0003770"}


id: PR:O13870
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- not3 gene.","definition_xrefs":["UniProtKB:O13870","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general negative regulator of transcription subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.05","synonyms":[{"name":"Spom972h-not3","type":"exact"}],"termid":"PR:O13870"}


id: GO:0071438
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The portion of the plasma membrane surrounding an invadopodium.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete invadopodium membrane (obsolete GO:0071438)","termid":"GO:0071438"}


id: PBO:0039275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 3, pseudogene","termid":"PBO:0039275"}


id: PBO:0076105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 10","termid":"PBO:0076105"}


id: PBO:0072678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rubicon like autophagy enhancer","termid":"PBO:0072678"}


id: PBO:0024853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human LAMTOR2 ortholog Lam2","termid":"PBO:0024853"}


id: PBO:0050220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 37","termid":"PBO:0050220"}


id: PBO:0076064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm tail PG-rich repeat containing 2","termid":"PBO:0076064"}


id: MONDO:0005183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign ovarian surface epithelial-stromal tumor characterized by the presence of cystic structures lined by serous epithelial cells, mucinous columnar epithelial cells, or endometrial-type well-differentiated cells.","definition_xrefs":["NCIT:C4060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystadenoma","termid":"MONDO:0002369"},{"relation_name":"is_a","term_name":"ovarian adenoma benign","termid":"MONDO:0005179"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian cystadenoma","secondary_identifiers":["ICD9:620.2","MEDGEN:138041","UMLS:C0346169","DOID:3269","EFO:0002511","SCTID:198297004"],"synonyms":[{"name":"benign cystadenoma of ovary","type":"exact"},{"name":"benign cystadenoma of the ovary","type":"exact"},{"name":"benign ovarian cystadenoma","type":"exact"},{"name":"cystadenoma of ovary","type":"exact"},{"name":"cystadenoma of the ovary","type":"exact"},{"name":"cystoma serosum simplex","type":"exact"},{"name":"ovarian cystadenoma","type":"exact"},{"name":"ovary cystadenoma","type":"exact"},{"name":"simple cystoma of ovary","type":"exact"},{"name":"simple cystoma of the ovary","type":"exact"},{"name":"simple ovarian cystoma","type":"exact"}],"termid":"MONDO:0005183","xrefs":{"Monarch":{"xref_id":"0005183"}}}


id: PR:O74942
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptidylprolyl isomerase domain and WD repeat-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04259","PANTHER:PTHR11071:SF40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.04","secondary_identifiers":["UniProtKB:O74942"],"synonyms":[{"name":"PPIase cyp9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPWD1","type":"exact"},{"name":"cyclophilin 9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rotamase cyp9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74942"}


id: PBO:0038884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 10","termid":"PBO:0038884"}


id: PBO:0059559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1C, pseudogene","termid":"PBO:0059559"}


id: GO:0048188
data:
  {"annotated_genes":["SJAG_03431","SJAG_02170","SJAG_07011","SJAG_00769","SJAG_00896","SJAG_02329","SJAG_02768","SJAG_01325"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73043,73649,75710,77266,80289,92581,111321,117708],"is_not":false,"summary":null,"term":"GO:0048188"}]},"cv_name":"cellular_component","definition":"A conserved protein complex that catalyzes methylation of histone H3. In Saccharomyces the complex contains Shg1p, Sdc1p, Swd1p, Swd2p, Swd3p, Spp1p, Bre2p, and the trithorax-related Set1p; in mammals it contains the catalytic subunit (SETD1A or SETD1B), WDR5, WDR82, RBBP5, ASH2L/ASH2, CXXC1/CFP1, HCFC1 and DPY30.","definition_xrefs":["PMID:11805083","PMID:18838538","PMID:11742990","PMID:12488447","PMID:11687631","PMID:18508253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone methyltransferase complex","termid":"GO:0035097"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00769":null,"SJAG_00896":null,"SJAG_01325":null,"SJAG_02170":null,"SJAG_02329":null,"SJAG_02768":null,"SJAG_03431":null,"SJAG_07011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005654","GO:0005575"],"is_obsolete":false,"name":"Set1C/COMPASS complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"COMPASS complex","type":"exact"},{"name":"Set1/COMPASS complex","type":"exact"},{"name":"Set1C","type":"exact"}],"termid":"GO:0048188","terms_by_termid":{"GO:0048188":null}}


id: PBO:0089312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall glucan glucosidase Exg2","termid":"PBO:0089312"}


id: PBO:0053895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1180","termid":"PBO:0053895"}


id: MONDO:0800183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any eye disorder in which the cause of the disease is a mutation in the PAX6 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"eye carcinoma","termid":"MONDO:0002466"},{"relation_name":"is_a","term_name":"hereditary renal cell carcinoma","termid":"MONDO:0003008"},{"relation_name":"is_a","term_name":"SMARCB1-deficient kidney medullary carcinoma","termid":"MONDO:0100534"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"PAX6-related ocular dysgenesis","termid":"MONDO:0800183","xrefs":{"Monarch":{"xref_id":"0800183"}}}


id: PBO:0073394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain containing 9","termid":"PBO:0073394"}


id: PBO:0053820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1081","termid":"PBO:0053820"}


id: MONDO:0100096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with severe acute respiratory syndrome coronavirus 2.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Orthocoronavirinae infectious disease","termid":"MONDO:0020753"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COVID-19","secondary_identifiers":["SCTID:840539006","MESH:C000657245","icd11.foundation:1730556128","DOID:0080600","MESH:D000086382","ICD10CM:U07.1","UMLS:C5203670","MEDGEN:1699653"],"synonyms":[{"name":"2019 novel coronavirus","type":"related"},{"name":"2019 novel coronavirus infection","type":"exact"},{"name":"2019-nCoV","type":"related"},{"name":"2019-nCoV infection","type":"exact"},{"name":"SARS-CoV-2","type":"related"},{"name":"SARS-coronavirus 2","type":"related"},{"name":"beta-CoV","type":"related"},{"name":"beta-CoVs","type":"related"},{"name":"betacoronavirus","type":"related"},{"name":"coronavirus disease 2019","type":"exact"},{"name":"severe acute respiratory syndrome coronavirus 2","type":"related"},{"name":"severe acute respiratory syndrome coronavirus 2 infectious disease","type":"exact"},{"name":"β-CoV","type":"related"},{"name":"β-CoVs","type":"related"},{"name":"β-coronavirus","type":"related"}],"termid":"MONDO:0100096","xrefs":{"Monarch":{"xref_id":"0100096"}}}


id: PBO:0041899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caveolae associated protein 4","termid":"PBO:0041899"}


id: PBO:0081476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF350 antisense RNA 1","termid":"PBO:0081476"}


id: GO:0000348
data:
  {"annotated_genes":["SJAG_00249"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120750],"is_not":false,"summary":null,"term":"GO:0000348"}]},"cv_name":"biological_process","definition":"Recognition of the pre-mRNA branch site sequence by components of the assembling spliceosome.","definition_xrefs":["ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"spliceosomal complex assembly","termid":"GO:0000245"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"mRNA branch site recognition","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000371","GO:0000370"],"synonyms":[{"name":"U12-type nuclear mRNA branch site recognition","type":"narrow"},{"name":"U2-type nuclear mRNA branch site recognition","type":"narrow"},{"name":"nuclear mRNA branch site recognition","type":"exact"},{"name":"spliceosomal A complex biosynthesis","type":"narrow"},{"name":"spliceosomal A complex formation","type":"narrow"},{"name":"spliceosomal B complex biosynthesis","type":"narrow"},{"name":"spliceosomal B complex formation","type":"narrow"}],"termid":"GO:0000348","terms_by_termid":{"GO:0000348":null}}


id: PBO:0063372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prenylcysteine oxidase 1 like","termid":"PBO:0063372"}


id: GO:0033177
data:
  {"annotated_genes":["SJAG_05294","SJAG_02782","SJAG_00516","SJAG_03406","SJAG_01913","SJAG_MIT09","SJAG_02023","SJAG_03962"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[121105],"is_not":false,"summary":null,"term":"GO:0033177"},{"annotations":[62670,93934,97550,97731,101865,92030,105841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000220"}]},"cv_name":"cellular_component","definition":"A protein complex that forms part of a proton-transporting two-sector ATPase complex and carries out proton transport across a membrane. The proton-transporting domain (F0, V0, or A0) includes integral and peripheral membrane proteins.","definition_xrefs":["GOC:mah","PMID:10838056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"proton-transporting two-sector ATPase complex","termid":"GO:0016469"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00516":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_03962":null,"SJAG_05294":null,"SJAG_MIT09":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proton-transporting two-sector ATPase complex, proton-transporting domain","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0033177","terms_by_termid":{"GO:0000220":null,"GO:0033177":null}}


id: MONDO:1010443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cardiomyopathy that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy, non-human animal","termid":"MONDO:1010010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy, cattle","secondary_identifiers":["OMIA:000160-9913"],"termid":"MONDO:1010443","xrefs":{"Monarch":{"xref_id":"1010443"}}}


id: MONDO:1011199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary chondrodysplasia in cattle associated with a variation in the FGFR3 gene.","definition_xrefs":["PMID:32239744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia, non-human animal","termid":"MONDO:1010306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrodysplasia FGFR3-related, cattle","secondary_identifiers":["OMIA:001703-9913"],"termid":"MONDO:1011199","xrefs":{"Monarch":{"xref_id":"1011199"}}}


id: GO:0010950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of endopeptidase activity, the endohydrolysis of peptide bonds within proteins.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptidase activity","termid":"GO:0010952"},{"relation_name":"is_a","term_name":"regulation of endopeptidase activity","termid":"GO:0052548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endopeptidase activity","termid":"GO:0010950"}


id: FYPO:0002873
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a septum in the normal orientation perpendicular the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"is_a","term_name":"normal septum location","termid":"FYPO:0002253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal septum orientation","synonyms":[{"name":"normal septum orientation during mitotic cell cycle","type":"related"},{"name":"normal septum orientation during vegetative growth","type":"exact"},{"name":"normal septum position","type":"related"}],"termid":"FYPO:0002873"}


id: PBO:0074860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 46","termid":"PBO:0074860"}


id: PBO:0046200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin A3 family member D, pseudogene","termid":"PBO:0046200"}


id: GO:0048681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of axon regeneration.","definition_xrefs":["GOC:lm","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"regulation of axon regeneration","termid":"GO:0048679"},{"relation_name":"is_a","term_name":"negative regulation of neuron projection regeneration","termid":"GO:0070571"},{"relation_name":"is_a","term_name":"negative regulation of response to wounding","termid":"GO:1903035"},{"relation_name":"negatively_regulates","term_name":"axon regeneration","termid":"GO:0031103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of axon regeneration","synonyms":[{"name":"down regulation of axon regeneration","type":"exact"},{"name":"down-regulation of axon regeneration","type":"exact"},{"name":"downregulation of axon regeneration","type":"exact"},{"name":"inhibition of axon regeneration","type":"narrow"}],"termid":"GO:0048681"}


id: PR:Q1MTR2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein with serine-rich domain 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR15481:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein with serine-rich domain 1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.14c","secondary_identifiers":["UniProtKB:Q1MTR2"],"synonyms":[{"name":"Spom972h-RNPS1","type":"exact"}],"termid":"PR:Q1MTR2"}


id: PBO:0062655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily C member 5","termid":"PBO:0062655"}


id: GO:0050456
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 L-cysteine + NAD+ = L-cystine + H+ + NADH.","definition_xrefs":["EC:1.8.1.6","RHEA:20597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-cystine reductase (NADH) activity","secondary_identifiers":["MetaCyc:CYSTINE-REDUCTASE-NADH-RXN","KEGG_REACTION:R00892"],"synonyms":[{"name":"L-cysteine:NAD+ oxidoreductase","type":"related"},{"name":"NADH-dependent cystine reductase activity","type":"related"},{"name":"NADH2:L-cystine oxidoreductase","type":"related"},{"name":"NADH:L-cystine oxidoreductase activity","type":"related"},{"name":"cystine reductase (NADH) activity","type":"related"},{"name":"cystine reductase (NADH2)","type":"related"},{"name":"cystine reductase activity","type":"exact"}],"termid":"GO:0050456"}


id: GO:0042770
data:
  {"annotated_genes":["SJAG_04671","SJAG_03529","SJAG_00640","SJAG_01146","SJAG_04287","SJAG_01605","SJAG_02098","SJAG_01429","SJAG_00486","SJAG_00364","SJAG_01708","SJAG_03942","SJAG_04332","SJAG_01680","SJAG_01044","SJAG_01205","SJAG_01855","SJAG_04140","SJAG_02266","SJAG_01873","SJAG_02026","SJAG_02771","SJAG_03160","SJAG_00327","SJAG_03048","SJAG_01677","SJAG_00429","SJAG_00623","SJAG_03898","SJAG_03026","SJAG_05373","SJAG_04280","SJAG_02563","SJAG_03720","SJAG_01084","SJAG_00169","SJAG_02576"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116467,118007,95444,81925,79868,118235,113183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044773"},{"annotations":[111646,93187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[62305,74093,90989,102977,101275,119028,77022,108575,60765,61476,111291,81180,93311,113715,67814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[81092,90990,108576,109624,93312,102783,101276,96436,91036,97914,113716,76103,80717,81179,92318,104293,114022,118064,75669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"}]},"cv_name":"biological_process","definition":"A cascade of processes induced by the detection of DNA damage within a cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA damage response","termid":"GO:0006974"},{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00429":null,"SJAG_00486":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_01044":null,"SJAG_01084":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01708":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02026":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03529":null,"SJAG_03720":null,"SJAG_03898":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"signal transduction in response to DNA damage","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0006975"],"synonyms":[{"name":"DNA damage induced protein phosphorylation","type":"narrow"},{"name":"DNA damage response, signal transduction","type":"exact"},{"name":"response to DNA damage stimulus by intracellular signaling cascade","type":"exact"}],"termid":"GO:0042770","terms_by_termid":{"GO:0007095":null,"GO:0031571":null,"GO:0031573":null,"GO:0044773":null}}


id: GO:0006106
data:
  {"annotated_genes":["SJAG_04843","SJAG_00203"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81073,92041],"is_not":false,"summary":null,"term":"GO:0006106"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving fumarate, the anion of trans-1,2-ethenedicarboxylic acid, the diastereoisomer of maleate. It is a key intermediate in metabolism and is formed in the TCA cycle from succinate and converted into malate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00203":null,"SJAG_04843":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fumarate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"fumarate metabolism","type":"exact"}],"termid":"GO:0006106","terms_by_termid":{"GO:0006106":null}}


id: PBO:0084500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein required for meiotic recombination; makes DNA double-strand breaks (DSB) during meiotic recombination, homolog pairing, and synaptonemal complex formation; role in meiotic DSB formation involves a topo-II-like transesterase mechanism; forms monotetrameric complex; covalently linked to DSBs through a 5'-phosphodiester bond between a catalytic tyrosine (Y135) and the DSB 5'- end; sequence similarity to a topo VI subunit from archaea, fission yeast rec12 and human SPO11","termid":"PBO:0084500"}


id: FYPO:0005452
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one of two different alleles of a gene is lost more frequently than normal after a double-strand break forms nearby.","definition_xrefs":["PomBase:mah","PMID:17724078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased break-induced loss of heterozygosity","synonyms":[{"name":"increased break-induced loss of heterozygosity during mitotic cell cycle","type":"related"},{"name":"increased break-induced loss of heterozygosity during vegetative growth","type":"exact"}],"termid":"FYPO:0005452"}


id: GO:0010467
data:
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id: PBO:0005706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex CAF1 family ribonuclease subunit Caf1","termid":"PBO:0005706"}


id: GO:0046877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of saliva from a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"is_a","term_name":"regulation of body fluid levels","termid":"GO:0050878"},{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"regulates","term_name":"saliva secretion","termid":"GO:0046541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of saliva secretion","termid":"GO:0046877"}


id: PBO:0077516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM231 pseudogene 1","termid":"PBO:0077516"}


id: MONDO:0018488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic odontal or periodontal disorder (obsolete MONDO:0018488)","secondary_identifiers":["Orphanet:420755"],"termid":"MONDO:0018488","xrefs":{"Monarch":{"xref_id":"0018488"}}}


id: PATO:0002525
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer being in a position that produces a separation in, or acting to separate, another entity.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"separating","termid":"PATO:0002525"}


id: GO:0045006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an amino group from a nucleotide base in DNA. An example is the deamination of cytosine to produce uracil.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA modification","termid":"GO:0006304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA deamination","termid":"GO:0045006"}


id: PBO:0044032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSPG4 pseudogene 1 Y-linked","termid":"PBO:0044032"}


id: PBO:0039484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A7, pseudogene","termid":"PBO:0039484"}


id: PBO:0083633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF3a subunit of the eukaryotic translation initiation factor 3 (eIF3); subunit of the core complex of eIF3; part of a Prt1p-Rpg1p-Nip1p subcomplex that stimulates binding of mRNA and tRNA(i)Met to ribosomes; essential for loading mRNA onto ribosome at entry and exit channels of preinitiation complex; involved in translation reinitiation; eIF3 is also involved in programmed stop codon readthrough","termid":"PBO:0083633"}


id: MONDO:0958189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nevoid basal cell carcinoma syndrome","termid":"MONDO:0007187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"basal cell nevus syndrome 2","secondary_identifiers":["DOID:0070366","MEDGEN:1841087","UMLS:C5830451","OMIM:620343"],"termid":"MONDO:0958189","xrefs":{"Monarch":{"xref_id":"0958189"}}}


id: PBO:0030936
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_linear_element","termid":"PBO:0030936"}


id: PBO:0074130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 31 member 2","termid":"PBO:0074130"}


id: GO:0102119
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A20 + S-adenosyl-L-methionine = gibberellin A20 methyl ester + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A20 carboxyl methyltransferase activity (obsolete GO:0102119)","termid":"GO:0102119"}


id: MONDO:0014105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the DUSP6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kallmann syndrome","termid":"MONDO:0018800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 19 with or without anosmia","secondary_identifiers":["DOID:0090090","ICD10CM:E23.0","OMIM:615269","GARD:15931","MEDGEN:815311","UMLS:C3808981"],"synonyms":[{"name":"DUSP6 hypogonadotropic hypogonadism","type":"exact"},{"name":"HH19","type":"related"},{"name":"hypogonadotropic hypogonadism 19 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in DUSP6","type":"exact"}],"termid":"MONDO:0014105","xrefs":{"Monarch":{"xref_id":"0014105"}}}


id: MONDO:0007499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ear folding","secondary_identifiers":["UMLS:C1851901","OMIM:128500","MEDGEN:377546"],"synonyms":[{"name":"ear folding","type":"exact"}],"termid":"MONDO:0007499","xrefs":{"Monarch":{"xref_id":"0007499"}}}


id: PR:Q9UTB3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- deg1 gene.","definition_xrefs":["UniProtKB:Q9UTB3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase C25B8.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.05","synonyms":[{"name":"Spom972h-deg1","type":"exact"}],"termid":"PR:Q9UTB3"}


id: GO:1903476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein localization to cell division site that is involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GOC:mtg_cell_cycle","GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell division site involved in cytokinesis, actomyosin contractile ring assembly","termid":"GO:1902575"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic actomyosin contractile ring assembly","termid":"GO:1903475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0044085","GO:0051179","GO:0000281","GO:0007049","GO:0007010"],"is_obsolete":false,"name":"protein localization to cell division site involved in mitotic actomyosin contractile ring assembly","synonyms":[{"name":"protein localisation to cell division site involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"protein localization to cell division site involved in actomyosin contractile ring assembly involved in cytokinesis after mitosis","type":"exact"},{"name":"protein localization to cell division site involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"}],"termid":"GO:1903476"}


id: PBO:0026669
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_cell_cycle_phase_transition","termid":"PBO:0026669"}


id: GO:0030687
data:
  {"annotated_genes":["SJAG_04992","SJAG_03697","SJAG_04346","SJAG_00689","SJAG_02830","SJAG_04330","SJAG_04492","SJAG_02644","SJAG_03466","SJAG_04491","SJAG_03719","SJAG_01275","SJAG_00311","SJAG_01454","SJAG_01839","SJAG_03413","SJAG_02436","SJAG_04395","SJAG_00882","SJAG_00271","SJAG_02759","SJAG_00722","SJAG_02427","SJAG_01811","SJAG_01606","SJAG_01494"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62171,73002,73407,73998,74054,76606,76988,77843,77977,78519,79280,80077,80510,81149,81669,95092,96735,99881,101092,101376,105437,118229],"is_not":false,"summary":null,"term":"GO:0030687"},{"annotations":[81950,99792,74631],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030690"},{"annotations":[114425,74632,81951],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030691"}]},"cv_name":"cellular_component","definition":"A preribosomal complex consisting of 27SA, 27SB, and/or 7S pre-rRNA, 5S rRNA, ribosomal proteins including late-associating large subunit proteins, and associated proteins; a precursor of the eukaryotic cytoplasmic large ribosomal subunit.","definition_xrefs":["PMID:10567516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preribosome","termid":"GO:0030684"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00271":null,"SJAG_00311":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00882":null,"SJAG_01275":null,"SJAG_01454":null,"SJAG_01494":null,"SJAG_01606":null,"SJAG_01811":null,"SJAG_01839":null,"SJAG_02427":null,"SJAG_02436":null,"SJAG_02644":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_03413":null,"SJAG_03466":null,"SJAG_03697":null,"SJAG_03719":null,"SJAG_04330":null,"SJAG_04346":null,"SJAG_04395":null,"SJAG_04491":null,"SJAG_04492":null,"SJAG_04992":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0030684"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0030684","GO:0005575"],"is_obsolete":false,"name":"preribosome, large subunit precursor","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"66S preribosome","type":"narrow"}],"termid":"GO:0030687","terms_by_termid":{"GO:0030687":null,"GO:0030690":null,"GO:0030691":null}}


id: GO:0097342
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex whose core components are the receptor-interacting serine/threonine-protein kinases RIPK1 and RIPK3 (also called RIP1 and RIP3). Formation of the ripoptosome can induce an extrinsic apoptotic signaling pathway or a necroptotic signaling pathway. The composition of this protein complex may depend on several factors including nature of the signal, cell type and more.","definition_xrefs":["PMID:22274400","GOC:bhm","GOC:mtg_apoptosis","PMID:22265414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005829","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"ripoptosome","synonyms":[{"name":"TNFR1 complex II","type":"narrow"},{"name":"Tnfr1-CII","type":"narrow"},{"name":"necrosome","type":"related"}],"termid":"GO:0097342"}


id: RO:HOM0000044
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Homocracy that involves morphologically and phylogenetically disparate structures that are the result of parallel evolution.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_homocracy_relationship_with","termid":"RO:HOM0000003"},{"relation_name":"is_a","term_name":"in_parallelism_relationship_with","termid":"RO:HOM0000005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_deep_homology_relationship_with","synonyms":[{"name":"deep genetic homology","type":"exact"},{"name":"deep homologous to","type":"exact"},{"name":"generative homology","type":"related"},{"name":"homoiology","type":"related"}],"termid":"RO:HOM0000044"}


id: GO:0070622
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity; the bovine complex contains disulfide-linked homodimers of 166- and 51-kDa subunits and two identical, noncovalently associated 56-kDa subunits.","definition_xrefs":["GOC:mah","PMID:8940155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"part_of","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005773","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase complex","synonyms":[{"name":"N-acetylglucosamine-1-phosphotransferase complex","type":"related"},{"name":"UDP-N-acetylglucosamine:lysosomal-enzyme N-acetylglucosamine-1-phosphotransferase complex","type":"exact"}],"termid":"GO:0070622"}


id: PBO:0048446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastrulation brain homeobox 2","termid":"PBO:0048446"}


id: PBO:0062896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacid CoA-transferase 2","termid":"PBO:0062896"}


id: PBO:0003462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA processing protein (predicted)","termid":"PBO:0003462"}


id: GO:0018587
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete limonene 8-monooxygenase activity (obsolete GO:0018587)","synonyms":[{"name":"limonene 8-monooxygenase activity","type":"exact"}],"termid":"GO:0018587"}


id: MONDO:0000558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spastic ataxia (obsolete MONDO:0000558)","termid":"MONDO:0000558","xrefs":{"Monarch":{"xref_id":"0000558"}}}


id: GO:0060219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a photoreceptor cell in a camera-type eye.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye photoreceptor cell differentiation","termid":"GO:0001754"},{"relation_name":"part_of","term_name":"neural retina development","termid":"GO:0003407"},{"relation_name":"part_of","term_name":"retina morphogenesis in camera-type eye","termid":"GO:0060042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"camera-type eye photoreceptor cell differentiation","termid":"GO:0060219"}


id: PATO:0002126
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's containing bone.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osseous","synonyms":[{"name":"bony","type":"exact"}],"termid":"PATO:0002126"}


id: PR:Q9UT83
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug28 gene.","definition_xrefs":["UniProtKB:Q9UT83","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 28 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.07","synonyms":[{"name":"Spom972h-mug28","type":"exact"}],"termid":"PR:Q9UT83"}


id: MOD:01503
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ4plex-116 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ4plex-116 reporter+balance reagent acylated residue","termid":"MOD:01499"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent N-acylated residue","termid":"MOD:01709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-116 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:01503"}


id: GO:0016155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-formyltetrahydrofolate + H2O + NADP+ = (6S)-5,6,7,8-tetrahydrofolate + CO2 + H+ + NADPH.","definition_xrefs":["EC:1.5.1.6","RHEA:10180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"formyltetrahydrofolate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R00941","MetaCyc:FORMYLTETRAHYDROFOLATE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"10-formyl tetrahydrofolate:NADP oxidoreductase activity","type":"related"},{"name":"10-formyl-H2PtGlu:NADP oxidoreductase activity","type":"related"},{"name":"10-formyl-H4folate dehydrogenase activity","type":"related"},{"name":"10-formyltetrahydrofolate dehydrogenase activity","type":"related"},{"name":"10-formyltetrahydrofolate:NADP+ oxidoreductase activity","type":"related"},{"name":"N10-formyltetrahydrofolate dehydrogenase activity","type":"related"}],"termid":"GO:0016155"}


id: PBO:0058273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4650-2","termid":"PBO:0058273"}


id: MONDO:0018936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign bone-forming neoplasm usually arising from the spine. It is a well-circumscribed lytic tumor that varies in size. The tumor is composed of woven bone trabeculae and shares similar histologic characteristics with the osteoid osteoma. Surgical curettage is the treatment of choice. The prognosis is excellent.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoblastoma","secondary_identifiers":["MedDRA:10004430","MESH:D018215","DOID:0060098","MEDGEN:18212","NCIT:C3294","Orphanet:58040","ICDO:9200/0","UMLS:C0029417","ICD10CM:D16.5","icd11.foundation:1948326341","GARD:18854","HP:0011846"],"synonyms":[{"name":"giant osteoid osteoma","type":"exact"},{"name":"ossifying giant cell tumor","type":"exact"},{"name":"ossifying giant cell tumour","type":"exact"},{"name":"osteoblastoma","type":"exact"},{"name":"osteoblastoma (disease)","type":"exact"},{"name":"osteoblastoma, benign","type":"exact"}],"termid":"MONDO:0018936","xrefs":{"Monarch":{"xref_id":"0018936"}}}


id: PR:O94406
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-splicing factor 18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor 18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.14","secondary_identifiers":["UniProtKB:O94406"],"synonyms":[{"name":"Spom972h-PRPF18","type":"exact"}],"termid":"PR:O94406"}


id: MONDO:0020016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare neurologic disease with psychiatric involvement (obsolete MONDO:0020016)","secondary_identifiers":["Orphanet:98033"],"termid":"MONDO:0020016","xrefs":{"Monarch":{"xref_id":"0020016"}}}


id: GO:0061298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the vasculature of the retina over time, from its formation to the mature structure.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculature development","termid":"GO:0001944"},{"relation_name":"part_of","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina vasculature development in camera-type eye","synonyms":[{"name":"retinal vasculature development","type":"exact"}],"termid":"GO:0061298"}


id: PBO:0114351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane amino acid transmembrane transporter Dip5","termid":"PBO:0114351"}


id: PBO:0054507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1907","termid":"PBO:0054507"}


id: MONDO:0005821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital syphilis","termid":"MONDO:0005714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late congenital syphilis","secondary_identifiers":["icd11.foundation:1685932952","MEDGEN:640497","DOID:10039","ICD9:090.5","ICD9:090.40","ICD9:090.7","SCTID:82323002","UMLS:C0554634","ICD9:090.4"],"synonyms":[{"name":"juvenile neurosyphilis","type":"related"},{"name":"juvenile syphilis","type":"related"},{"name":"late congenital syphilis","type":"exact"},{"name":"late congenital syphilis (2 years or more)","type":"exact"},{"name":"late congenital syphilis, symptomatic (2 years or more)","type":"related"}],"termid":"MONDO:0005821","xrefs":{"Monarch":{"xref_id":"0005821"}}}


id: PR:O74507
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC594.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C594.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC594.04c","synonyms":[{"name":"Spom972h-SPCC594.04c","type":"exact"}],"termid":"PR:O74507"}


id: MONDO:0008508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"symphalangism","termid":"MONDO:0000151"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symphalangism, C. S. Lewis type","secondary_identifiers":["MESH:C566100","MEDGEN:396126","UMLS:C1861404","OMIM:185650"],"synonyms":[{"name":"symphalangism, C. S. Lewis type","type":"exact"},{"name":"thumbs, stiff","type":"related"}],"termid":"MONDO:0008508","xrefs":{"Monarch":{"xref_id":"0008508"}}}


id: MONDO:0003211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the nasal cavity","direct_ancestors":[{"relation_name":"is_a","term_name":"nasal cavity carcinoma","termid":"MONDO:0003212"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"nasal cavity adenocarcinoma","secondary_identifiers":["DOID:4930","MEDGEN:233746","NCIT:C6015","UMLS:C1334920"],"synonyms":[{"name":"adenocarcinoma of nasal cavity","type":"exact"},{"name":"adenocarcinoma of the nasal cavity","type":"exact"},{"name":"nasal cavity adenocarcinoma","type":"exact"}],"termid":"MONDO:0003211","xrefs":{"Monarch":{"xref_id":"0003211"}}}


id: PBO:0074295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory leukocyte peptidase inhibitor","termid":"PBO:0074295"}


id: MONDO:0009607
data:
  {"annotated_genes":["SJAG_03659"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87796],"is_not":false,"summary":null,"term":"MONDO:0009607"}]},"cv_name":"mondo","definition":"Hypermethioninemia due to methionine adenosyltransferase deficiency is a very rare metabolic disorder resulting in isolated hepatic hypermethioninemia that is usually benign due to partial inactivation of enzyme activity. Rarely patients have been found to have an odd odor or neurological disorders such as brain demyelination.","definition_xrefs":["Orphanet:168598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of methionine cycle and sulfur amino acid metabolism","termid":"MONDO:0019222"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03659":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"methionine adenosyltransferase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:75700","NCIT:C123435","GARD:8397","OMIM:250850","UMLS:C0268621"],"synonyms":[{"name":"MAT I/III deficiency","type":"exact"},{"name":"MAT deficiency","type":"exact"},{"name":"Mat I/III deficiency","type":"related"},{"name":"brain demyelination due to methionine adenosyltransferase deficiency","type":"exact"},{"name":"hypermethioninemia, isolated persistent","type":"related"},{"name":"hypermethioninemia, persistent, autosomal dominant, due to methionine adenosyltransferase I/III deficiency","type":"exact"},{"name":"isolated persistent hypermethioninemia","type":"exact"},{"name":"methionine adenosyltransferase I/III deficiency","type":"related"},{"name":"methionine adenosyltransferase deficiency","type":"exact"},{"name":"methionine adenosyltransferase deficiency, autosomal recessive","type":"exact"}],"termid":"MONDO:0009607","terms_by_termid":{"MONDO:0009607":null},"xrefs":{"Monarch":{"xref_id":"0009607"}}}


id: GO:0052098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly by an organism of a cellular component or anatomical structure for the purpose of obtaining nutrients from a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with symbiont","termid":"GO:0051702"},{"relation_name":"part_of","term_name":"acquisition of nutrients from symbiont","termid":"GO:0051850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation by host of specialized structure for nutrient acquisition from symbiont","termid":"GO:0052098"}


id: MONDO:0005920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malaria resulting from infection by Plasmodium falciparum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malaria","termid":"MONDO:0005136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Plasmodium falciparum malaria","secondary_identifiers":["EFO:0007444","UMLS:C0024535","ICD9:084.0","MESH:D016778","MEDGEN:6185","ICD9:084.9","NCIT:C34798","DOID:14067","SCTID:62676009"],"synonyms":[{"name":"Plasmodium falciparum malaria, unspecified","type":"exact"},{"name":"falciparum malaria","type":"exact"},{"name":"falciparum malaria [malignant tertian]","type":"exact"},{"name":"malaria fever, subtertian","type":"exact"},{"name":"malignant tertian fever","type":"exact"},{"name":"malignant tertian fever (finding)","type":"exact"}],"termid":"MONDO:0005920","xrefs":{"Monarch":{"xref_id":"0005920"}}}


id: MONDO:0007534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Beckwith-Wiedemann syndrome (BWS) is a genetic disorder characterized by overgrowth, tumor predisposition and congenital malformations.","definition_xrefs":["Orphanet:116"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"macroglossia","termid":"MONDO:0015496"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic renal or urinary tract malformation (obsolete MONDO:0019721)","termid":"MONDO:0019721"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"},{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Beckwith-Wiedemann syndrome","secondary_identifiers":["MedDRA:10050344","UMLS:C0004903","MESH:D001506","DOID:5572","SCTID:81780002","NANDO:2200959","NCIT:C34415","NORD:845","MEDGEN:2562","icd11.foundation:803086260","ICD9:759.89","GARD:3343","OMIM:130650"],"synonyms":[{"name":"BWS","type":"exact"},{"name":"Beckwith-Wiedemann syndrome","type":"exact"},{"name":"Beckwith-Wiedemann syndrome chromosome region","type":"related"},{"name":"EMG syndrome","type":"related"},{"name":"Wiedemann-Beckwith syndrome","type":"exact"},{"name":"Wiedemann-Beckwith syndrome (WBS)","type":"related"},{"name":"exomphalos macroglossia gigantism syndrome","type":"related"},{"name":"exomphalos-macroglossia-gigantism syndrome","type":"exact"}],"termid":"MONDO:0007534","xrefs":{"Monarch":{"xref_id":"0007534"}}}


id: GO:0062064
data:
  {"annotated_genes":["SJAG_01567"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99400],"is_not":false,"summary":null,"term":"GO:0062064"}]},"cv_name":"molecular_function","definition":"Binding to a box C/D methylation guide snoRNP complex.","definition_xrefs":["PMID:10679015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNP binding","termid":"GO:0030519"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"box C/D methylation guide snoRNP complex binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062064","terms_by_termid":{"GO:0062064":null}}


id: PBO:0057150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 298","termid":"PBO:0057150"}


id: PBO:0074476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-strand-selective monofunctional uracil-DNA glycosylase 1","termid":"PBO:0074476"}


id: GO:1901702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of salt from one side of a membrane to the other.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"salt transmembrane transporter activity","termid":"GO:1901702"}


id: PBO:0050740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 2","termid":"PBO:0050740"}


id: MONDO:0017124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Noma is a gangrenous disease that causes severe destruction of the soft and osseous tissues of the face.","definition_xrefs":["Orphanet:2700"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"canker sore","termid":"MONDO:0005318"},{"relation_name":"is_a","term_name":"ulcerative stomatitis","termid":"MONDO:0004848"},{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"noma","secondary_identifiers":["GARD:4001","ICD9:528.1","MEDGEN:10366","NCIT:C34852","EFO:1001063","MedDRA:10029502","icd11.foundation:340823130","UMLS:C0028271","DOID:9672","SCTID:18116006","MESH:D009625"],"synonyms":[{"name":"cancrum oris","type":"exact"},{"name":"gangrenous stomatitis","type":"exact"},{"name":"noma neonatorum","type":"related"},{"name":"oral gangrene","type":"related"},{"name":"oro-facial gangrene","type":"related"},{"name":"oro-facial noma","type":"related"}],"termid":"MONDO:0017124","xrefs":{"Monarch":{"xref_id":"0017124"}}}


id: PBO:0000185
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperglycinemia","termid":"PBO:0000185"}


id: MONDO:0009651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pseudo-Hurler polydystrophy (obsolete MONDO:0009651)","termid":"MONDO:0009651","xrefs":{"Monarch":{"xref_id":"0009651"}}}


id: PBO:0083668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum protein; may contribute to maintenance of ER and nuclear morphology; null mutant shows discontinuity in nuclear envelope, clustering of nuclear pores, and lacks cortical ER","termid":"PBO:0083668"}


id: GO:0120159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a uridine in rRNA = a pseudouridine in rRNA. Conversion of uridine in an rRNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.","definition_xrefs":["RHEA:54568","PMID:28432181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudouridine synthase activity","termid":"GO:0009982"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}


id: PBO:0070948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 3","termid":"PBO:0070948"}


id: PBO:0039251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 3 family member A1","termid":"PBO:0039251"}


id: PBO:0044790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 3","termid":"PBO:0044790"}


id: PBO:0076490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TARDBP pseudogene 5","termid":"PBO:0076490"}


id: PBO:0051551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 9 receptor pseudogene 1","termid":"PBO:0051551"}


id: GO:0009553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the embryo sac over time, from its formation to the mature structure. The process begins with the meiosis of the megasporocyte to form four haploid megaspores. Three of the megaspores disintegrate, and the fourth undergoes mitosis giving rise to a binucleate syncytial embryo sac. The two haploid nuclei migrate to the opposite poles of the embryo sac and then undergo two rounds of mitosis generating four haploid nuclei at each pole. One nucleus from each set of four migrates to the center of the cell. Cellularization occurs, resulting in an eight-nucleate seven-celled structure. This structure contains two synergid cells and an egg cell at the micropylar end, and three antipodal cells at the other end. A binucleate endosperm mother cell is formed at the center. The two polar nuclei fuse resulting in a mononucleate diploid endosperm mother cell. The three antipodal cells degenerate.","definition_xrefs":["GOC:tb","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gametophyte development","termid":"GO:0048229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryo sac development","secondary_identifiers":["GO:0048230"],"synonyms":[{"name":"female gametophyte development","type":"exact"}],"termid":"GO:0009553"}


id: GO:0160209
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex that contains the fragile X mental retardation protein (FMRP) and cytoplasmic FMRP Interacting protein 1 (CYIFIP1), and is capable of inhibiting translation initiation by binding to the eIF4F complex.","definition_xrefs":["PMID:28183735","PMID:18805096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"FMRP-CYFIP1 complex","termid":"GO:0160209"}


id: PBO:0090346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside triphosphatase Ham1","termid":"PBO:0090346"}


id: PBO:0072780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SACS antisense RNA 1","termid":"PBO:0072780"}


id: PATO:0001972
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branched quality inhering in a bearer by virtue of the bearer's having secondary branches branching into a reticulum toward the margin.","definition_xrefs":["Hickey:1988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulodromous","termid":"PATO:0001972"}


id: FYPO:0002253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a septum in the normal location at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal septum location","synonyms":[{"name":"normal septum location during mitotic cell cycle","type":"related"},{"name":"normal septum location during vegetative growth","type":"exact"},{"name":"normal septum position","type":"related"},{"name":"normally localized septum","type":"exact"}],"termid":"FYPO:0002253"}


id: GO:0015083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of aluminum (Al) ions from one side of a membrane to the other.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic molecular entity transmembrane transporter activity","termid":"GO:0015318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"aluminum ion transmembrane transporter activity","secondary_identifiers":["GO:0015084"],"synonyms":[{"name":"aluminium ion transporter activity","type":"exact"},{"name":"aluminium resistance permease activity","type":"exact"},{"name":"aluminum resistance permease activity","type":"exact"}],"termid":"GO:0015083"}


id: PBO:0041119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 2","termid":"PBO:0041119"}


id: FYPO:0003998
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA primase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal DNA primase activity","termid":"FYPO:0003995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"increased DNA primase activity","termid":"FYPO:0003998"}


id: GO:0021872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which nerve cells are generated in the forebrain. This includes the production of neuroblasts from and their differentiation into neurons.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:jid","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of neurons","termid":"GO:0048699"},{"relation_name":"part_of","term_name":"forebrain development","termid":"GO:0030900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain generation of neurons","synonyms":[{"name":"generation of neurons in forebrain","type":"exact"}],"termid":"GO:0021872"}


id: GO:0090306
data:
  {"annotated_genes":["SJAG_01613","SJAG_01546","SJAG_04745","SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96670,98681],"is_not":false,"summary":null,"term":"GO:0090306"},{"annotations":[103368,101139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140642"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the spindle that contributes to the process of meiosis.","definition_xrefs":["GOC:vw","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic spindle organization","termid":"GO:0000212"},{"relation_name":"is_a","term_name":"spindle assembly","termid":"GO:0051225"},{"relation_name":"part_of","term_name":"meiotic chromosome segregation","termid":"GO:0045132"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01546":null,"SJAG_01613":null,"SJAG_03073":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0008150","GO:0000226","GO:0007010","GO:0044085"],"is_obsolete":false,"name":"meiotic spindle assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spindle assembly involved in meiosis","type":"exact"}],"termid":"GO:0090306","terms_by_termid":{"GO:0090306":null,"GO:0140642":null}}


id: PATO:0000532
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000532 micronutrient sensitivity value (obsolete PATO:0000532)","termid":"PATO:0000532"}


id: GO:0030095
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integral chloroplast membrane complex containing the P680 reaction center. In the light, PSII functions as a water-plastoquinone oxidoreductase, transferring electrons from water to plastoquinone.","definition_xrefs":["GOC:mtg_sensu","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosystem II","termid":"GO:0009523"},{"relation_name":"is_a","term_name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chloroplast photosystem II","termid":"GO:0030095"}


id: PBO:0067037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 51, pseudogene","termid":"PBO:0067037"}


id: MONDO:0015007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant complex spastic paraplegia","termid":"MONDO:0015087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia, intellectual disability, nystagmus, and obesity","secondary_identifiers":["UMLS:C4284592","GARD:17957","MEDGEN:924883","OMIM:617296","Orphanet:521390"],"synonyms":[{"name":"SINO","type":"related"},{"name":"spastic paraplegia, intellectual disability, nystagmus, and obesity","type":"exact"}],"termid":"MONDO:0015007","xrefs":{"Monarch":{"xref_id":"0015007"}}}


id: MONDO:0005890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder that is characterized by bone cysts and fractures, resulting from hyperparathyroidism.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone resorption disease","termid":"MONDO:0000837"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteitis fibrosa","secondary_identifiers":["UMLS:C0029405","MESH:D010002","DOID:3341","NCIT:C34875","EFO:0007413","MEDGEN:14529","SCTID:84727000"],"synonyms":[{"name":"Von Recklinghausen disease of Bone","type":"exact"},{"name":"Von Recklinghausen's bone disease","type":"exact"},{"name":"Von Recklinghausen's disease of Bone","type":"exact"},{"name":"hyperparathyroid bone disease","type":"exact"},{"name":"osteitis fibrosa cystica","type":"exact"},{"name":"osteitis fibrosa cystica generalisata","type":"exact"}],"termid":"MONDO:0005890","xrefs":{"Monarch":{"xref_id":"0005890"}}}


id: PBO:0044563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in azoospermia 4","termid":"PBO:0044563"}


id: PBO:0044138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP2 pseudogene 4","termid":"PBO:0044138"}


id: MONDO:0007875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Larsen syndrome (LS) is a rare skeletal dysplasia characterized by congenital dislocation of large joints, foot deformities, cervical spine dysplasia, scoliosis, spatula-shaped distal phalanges and distinctive craniofacial abnormalities, including cleft palate.","definition_xrefs":["Orphanet:503"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with multiple joint dislocations (obsolete MONDO:0019700)","termid":"MONDO:0019700"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"filamin-related bone disorder","termid":"MONDO:0019690"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Larsen syndrome","secondary_identifiers":["UMLS:C0175778","OMIM:150250","NORD:1349","MEDGEN:104500","DOID:14764","GARD:6860","icd11.foundation:607849551","ICD9:759.89","MESH:C580241","SCTID:63387002","NANDO:2201019"],"synonyms":[{"name":"LRS","type":"related"},{"name":"Larsen syndrome","type":"exact"},{"name":"autosomal dominant Larsen syndrome","type":"related"},{"name":"dominant Larsen syndrome","type":"exact"}],"termid":"MONDO:0007875","xrefs":{"Monarch":{"xref_id":"0007875"}}}


id: MONDO:0044641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial monosomy of the long arm of chromosome 9","termid":"MONDO:0016908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"9q33.3q34.11 microdeletion syndrome","secondary_identifiers":["UMLS:C5680085","GARD:22009","Orphanet:495818","MEDGEN:1811810"],"synonyms":[{"name":"9q33.3-q34.11 microdeletion syndrome","type":"exact"},{"name":"Del(9)(q33.3q34.11)","type":"exact"},{"name":"deletion 9q33.3q34.11","type":"exact"},{"name":"monosomy 9q33.3-q34.11","type":"exact"},{"name":"monosomy 9q33.3q34.11","type":"exact"}],"termid":"MONDO:0044641","xrefs":{"Monarch":{"xref_id":"0044641"}}}


id: PBO:0029200
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_clotrimazole","termid":"PBO:0029200"}


id: MONDO:0015580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal monosomy 7q36 is a rare chromosomal anomaly syndrome, resulting from a partial deletion of the long arm of chromosome 7, with a highly variable phenotype typically characterized by holoprosencephaly, growth restriction, developmental delay, facial dysmorphism (facial clefts, prominent forehead, hypertelorism, low-set ears, flat and broad nasal bridge, large mouth), abnormal fingers and palm or sole creases, ocular abnormalities, and other congenital malformations (incl. genital anomalies and caudal deficiency sequence). Cardiopathies have been occasionally reported.","definition_xrefs":["Orphanet:1636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 7","termid":"MONDO:0016906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal monosomy 7q36","secondary_identifiers":["MEDGEN:1642679","SCTID:763529005","UMLS:C4706504","GARD:18731"],"synonyms":[{"name":"distal deletion 7q36","type":"exact"},{"name":"distal monosomy type 7q36","type":"exact"},{"name":"monosomy 7qter","type":"exact"},{"name":"telomeric deletion 7q36","type":"exact"}],"termid":"MONDO:0015580","xrefs":{"Monarch":{"xref_id":"0015580"}}}


id: MONDO:0957215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"congenital myopathy 20","secondary_identifiers":["OMIM:620310","DOID:0081352","UMLS:C5830393","MEDGEN:1841029"],"termid":"MONDO:0957215","xrefs":{"Monarch":{"xref_id":"0957215"}}}


id: PR:O94394
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC126.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C126.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.01c","synonyms":[{"name":"Spom972h-SPCC126.01c","type":"exact"}],"termid":"PR:O94394"}


id: MONDO:0000213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune disease, multisystem, infantile-onset","secondary_identifiers":["OMIMPS:615952"],"termid":"MONDO:0000213","xrefs":{"Monarch":{"xref_id":"0000213"}}}


id: PATO:0010000
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in the bearer by virtue of the bearer consisting of a single, maximally connected structure.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maximally connected","termid":"PATO:0010000"}


id: PBO:0088375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, tricarboxylic acid Yhm2","termid":"PBO:0088375"}


id: PBO:0070888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 20","termid":"PBO:0070888"}


id: PBO:0065176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prominin 2","termid":"PBO:0065176"}


id: MONDO:0018767
data:
  {"annotated_genes":["SJAG_04608"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87837],"is_not":false,"summary":null,"term":"MONDO:0018767"}]},"cv_name":"mondo","definition":"Any trimethylaminuria in which the cause of the disease is a mutation in the FMO3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"trimethylaminuria","termid":"MONDO:0011182"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"severe primary trimethylaminuria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1814174","MESH:C536561","Orphanet:468726","HP:0003614","DOID:0080361","OMIM:602079","UMLS:C5575503","GARD:6447"],"synonyms":[{"name":"TMAU","type":"related"},{"name":"TMAuria","type":"related"},{"name":"fish malodor syndrome","type":"related"},{"name":"fish odor syndrome","type":"related"},{"name":"fish odour syndrome","type":"related"},{"name":"fish-odor syndrome","type":"related"},{"name":"stale fish syndrome","type":"related"},{"name":"trimethylaminuria","type":"broad"}],"termid":"MONDO:0018767","terms_by_termid":{"MONDO:0018767":null},"xrefs":{"Monarch":{"xref_id":"0018767"}}}


id: PBO:0060158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 6 (pseudogene)","termid":"PBO:0060158"}


id: PBO:0067543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 689, pseudogene","termid":"PBO:0067543"}


id: MOD:00492
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks the N6-amino of a peptidyl lysine with the carboxyl of glycylglycine, the two glycine residues left after tryptic digestion of ubiquitin.","definition_xrefs":["PubMed:11125103","Unimod:121#K","PubMed:12612601","RESID:AA0125#var","PubMed:12872131","OMSSA:52"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"ubiquitinylated lysine","termid":"MOD:01148"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"ubiquitination signature dipeptidyl lysine","synonyms":[{"name":"GlyGly","type":"related"},{"name":"N6-(glycylglycyl)lysine","type":"exact"},{"name":"N6-glycylglycyl-L-lysine","type":"exact"},{"name":"glyglyk","type":"exact"},{"name":"ubiquitinylation residue","type":"related"}],"termid":"MOD:00492"}


id: SO:0002171
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A telomeric D-loop is a three-stranded DNA displacement loop that forms at the site where the telomeric 3' single-stranded DNA overhang (formed of the repeat sequence TTAGGG in mammals) is tucked back inside the double-stranded component of telomeric DNA molecule, thus forming a t-loop or telomeric-loop and protecting the chromosome terminus.","definition_xrefs":["PMID:10338204","PMID:15071557","PMID:24012755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomeric_D_loop","synonyms":[{"name":"telomeric D loop","type":"exact"}],"termid":"SO:0002171"}


id: PBO:0088276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II complex TFIIS subunit Rpb9","termid":"PBO:0088276"}


id: GO:0050915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required to receive a sour taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of taste","termid":"GO:0050909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of sour taste","synonyms":[{"name":"sour taste perception","type":"exact"}],"termid":"GO:0050915"}


id: PBO:0086384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative benzil reductase;(GFP)-fusion protein localizes to the cytoplasm and is induced by the DNA-damaging agent MMS; sequence similarity with short-chain dehydrogenase/reductases; null mutant has increased spontaneous Rad52p foci","termid":"PBO:0086384"}


id: PR:Q10168
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear pore glycoprotein p62 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01401","PANTHER:PTHR12084:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nsp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.15c","secondary_identifiers":["UniProtKB:Q10168"],"synonyms":[{"name":"Spom972h-NUP62","type":"exact"},{"name":"nuclear pore protein nsp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nucleoskeletal-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10168"}


id: PBO:0073318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine incorporator 1","termid":"PBO:0073318"}


id: SO:0002177
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A duplication that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"insertion_artifact","termid":"SO:0002175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duplication_artifact","synonyms":[{"name":"duplication artifact","type":"exact"}],"termid":"SO:0002177"}


id: MONDO:0005792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stomatitis caused by Herpesvirus hominis. It usually occurs as acute herpetic stomatitis (or gingivostomatitis), an oral manifestation of primary herpes simplex seen primarily in children and adolescents.","definition_xrefs":["MESH:D013283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"herpes simplex infectious disease","termid":"MONDO:0004609"},{"relation_name":"is_a","term_name":"stomatitis","termid":"MONDO:0004842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"herpes simplex virus gingivostomatitis","secondary_identifiers":["EFO:0007307","SCTID:57920007"],"synonyms":[{"name":"Gingivostomatitides, herpetic","type":"related"},{"name":"Gingivostomatitis, herpetic","type":"related"},{"name":"Herpes simplex, oral","type":"related"},{"name":"Simplexvirus caused stomatitis","type":"exact"},{"name":"Simplexvirus stomatitis","type":"exact"},{"name":"Stomatitides, herpetic","type":"related"},{"name":"herpetic Gingivostomatitides","type":"related"},{"name":"herpetic Gingivostomatitis","type":"related"},{"name":"herpetic Stomatitides","type":"related"},{"name":"herpetic stomatitis","type":"related"},{"name":"oral Herpes simplex","type":"related"},{"name":"simplex, oral Herpes","type":"related"}],"termid":"MONDO:0005792","xrefs":{"Monarch":{"xref_id":"0005792"}}}


id: MONDO:0015260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bothriocephalosis is a mammalian cosmopolitan intestinal parasitosis. In addition to non-specific digestive problems (nausea, abdominal pain, lack of appetite), bothriocephalosis provokes an anemia caused by vitamin B12 deficiency that resembles Biermer anemia (anemia characterized by abnormally large red blood cells).","definition_xrefs":["Orphanet:128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cestode infectious disease","termid":"MONDO:0042488"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphyllobothriasis","secondary_identifiers":["MedDRA:10013029","ICD9:123.4","SCTID:187151009","ICD10CM:B70.0","icd11.foundation:1679215344","NCIT:C128391","DOID:10075","UMLS:C0012561","EFO:0007238","GARD:942","MEDGEN:3858","MESH:D004169"],"synonyms":[{"name":"Bothriocephalosis","type":"exact"},{"name":"Diphyllobothrium caused disease or disorder","type":"exact"},{"name":"Diphyllobothrium disease or disorder","type":"exact"},{"name":"Diphyllobothrium infection","type":"exact"},{"name":"Diphyllobothrium infectious disease","type":"exact"},{"name":"fish tapeworm","type":"exact"}],"termid":"MONDO:0015260","xrefs":{"Monarch":{"xref_id":"0015260"}}}


id: GO:0048659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of smooth muscle cells, resulting in the expansion of a cell population.","definition_xrefs":["PMID:1840698","CL:0000192","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell proliferation","termid":"GO:0033002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle cell proliferation","synonyms":[{"name":"SMC proliferation","type":"exact"}],"termid":"GO:0048659"}


id: GO:0036237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an acyl-glucuronoside + H2O = an alcohol + D-glucuronate.","definition_xrefs":["PMID:22294686","GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"acyl-glucuronidase activity","synonyms":[{"name":"acyl-glucuronide deglucuronidation activity","type":"narrow"}],"termid":"GO:0036237"}


id: GO:0048354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mucilage that occur as part of seed coat development; mucilage is normally synthesized during seed coat development.","definition_xrefs":["GOC:jid","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage biosynthetic process","termid":"GO:0010192"},{"relation_name":"is_a","term_name":"mucilage metabolic process involved in seed coat development","termid":"GO:0048359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucilage biosynthetic process involved in seed coat development","synonyms":[{"name":"mucilage anabolism during seed coat development","type":"exact"},{"name":"mucilage biosynthetic process during seed coat development","type":"related"},{"name":"mucilage formation during seed coat development","type":"exact"},{"name":"mucilage synthesis during seed coat development","type":"exact"}],"termid":"GO:0048354"}


id: PBO:0013114
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisie STM1","termid":"PBO:0013114"}


id: PBO:0029566
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomere_structure","termid":"PBO:0029566"}


id: PBO:0002985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homologous Pmf1 factor 1, implicated in isoleucine biosynthesis (predicted)","termid":"PBO:0002985"}


id: GO:0007276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The generation and maintenance of gametes in a multicellular organism. A gamete is a haploid reproductive cell.","definition_xrefs":["GOC:mtg_sensu","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"sexual reproduction","termid":"GO:0019953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamete generation","secondary_identifiers":["GO:0009552"],"synonyms":[{"name":"gametogenesis","type":"related"}],"termid":"GO:0007276"}


id: PBO:0047599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHF complex subunit HOOK interacting protein 1A","termid":"PBO:0047599"}


id: PBO:0068635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 15, pseudogene","termid":"PBO:0068635"}


id: GO:1904299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transcytosis.","definition_xrefs":["GOC:TermGenie","PMID:9664076","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of transcytosis","termid":"GO:1904298"},{"relation_name":"negatively_regulates","term_name":"transcytosis","termid":"GO:0045056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"negative regulation of transcytosis","synonyms":[{"name":"down regulation of transcytosis","type":"exact"},{"name":"down-regulation of transcytosis","type":"exact"},{"name":"downregulation of transcytosis","type":"exact"},{"name":"inhibition of transcytosis","type":"narrow"}],"termid":"GO:1904299"}


id: PBO:0067345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 442, pseudogene","termid":"PBO:0067345"}


id: MONDO:0043073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zadik-Barak-Levin syndrome","secondary_identifiers":["MEDGEN:444023","MESH:C536721","UMLS:C2931298"],"synonyms":[{"name":"dermoid cysts, hypothyroidism, cleft palate and hypodontia","type":"related"},{"name":"dermoid cysts, hypothyroidism, cleft palate, and hypodontia","type":"related"}],"termid":"MONDO:0043073","xrefs":{"Monarch":{"xref_id":"0043073"}}}


id: PBO:0001614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase (predicted)","termid":"PBO:0001614"}


id: PATO:0000807
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000807 proprioreception value (obsolete PATO:0000807)","termid":"PATO:0000807"}


id: PBO:0076818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teneurin transmembrane protein 4","termid":"PBO:0076818"}


id: PBO:0056398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein RP/EB family member 3","termid":"PBO:0056398"}


id: PBO:0112977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"14-3-3 protein, minor isoform; involved in post-transcriptional control of the proteome; binds to both proteins and to DNA, including replication origins; regulates multiple processes including exocytosis, vesicle transport, Ras/MAPK and rapamycin-sensitive signaling and meiotic commitment; protein abundance and relative distribution to the nucleus increase upon DNA replication stress; abundance relative to Bmh1p increases during sporulation; similar to several human 14-3-3 proteins","termid":"PBO:0112977"}


id: GO:0001527
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Extracellular matrix components occurring independently or along with elastin. Thought to have force-bearing functions in tendon. In addition to fibrillins, microfibrils may contain other associated proteins.","definition_xrefs":["PMID:27026396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular fiber","termid":"GO:0099512"},{"relation_name":"part_of","term_name":"extracellular matrix","termid":"GO:0031012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"microfibril","synonyms":[{"name":"extended fibrils","type":"exact"},{"name":"fibrillin","type":"related"}],"termid":"GO:0001527"}


id: GO:0043240
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of the Fanconi anaemia (FA) proteins including A, C, E, G and F (FANCA-F). Functions in the activation of the downstream protein FANCD2 by monoubiquitylation, and is essential for protection against chromosome breakage.","definition_xrefs":["PMID:12093742","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Fanconi anaemia nuclear complex","synonyms":[{"name":"FA complex","type":"exact"},{"name":"FA core complex","type":"exact"},{"name":"FA nuclear complex","type":"exact"},{"name":"Fanconi anaemia complex","type":"exact"}],"termid":"GO:0043240"}


id: MONDO:0015034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lissencephaly with cerebellar hypoplasia type A (LCHa) is a form of lissencephaly with cerebellar hypoplasia that encompasses classical lissencephaly with thickened cortical gray matter with either no discernible gradient, a gradient with posterior predominance, or a gradient with anterior predominance, and cerebellar vermis hypoplasia.","definition_xrefs":["Orphanet:100011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly with cerebellar hypoplasia","termid":"MONDO:0019450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly with cerebellar hypoplasia type A","secondary_identifiers":["GARD:19731","UMLS:C5191423","MEDGEN:1679234","icd11.foundation:853428618"],"termid":"MONDO:0015034","xrefs":{"Monarch":{"xref_id":"0015034"}}}


id: GO:1901043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein polyubiquitination that is involved in cellular response to misfolded protein.","definition_xrefs":["GOC:TermGenie","PMID:21324894","GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete protein polyubiquitination involved in cellular response to misfolded protein (obsolete GO:1901043)","synonyms":[{"name":"polyubiquitin of cellular response to misfolded protein","type":"related"},{"name":"protein polyubiquitination involved in cellular response to misfolded protein","type":"exact"},{"name":"protein polyubiquitination of cellular response to misfolded protein","type":"exact"},{"name":"protein polyubiquitinylation of cellular response to misfolded protein","type":"exact"},{"name":"protein polyubiquitylation of cellular response to misfolded protein","type":"exact"}],"termid":"GO:1901043"}


id: PBO:0067226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 296, pseudogene","termid":"PBO:0067226"}


id: PBO:0066063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rap guanine nucleotide exchange factor like 1","termid":"PBO:0066063"}


id: PBO:0000387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M phase inducer phosphatase Cdc25","termid":"PBO:0000387"}


id: GO:0080139
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71990],"is_not":false,"summary":null,"term":"GO:0080139"}]},"cv_name":"molecular_function","definition":"Enables the transfer of borate from the inside of the cell to the outside of the cell across a membrane.","definition_xrefs":["PMID:18603465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"},{"relation_name":"is_a","term_name":"efflux transmembrane transporter activity","termid":"GO:0015562"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"borate efflux transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"boron efflux transmembrane transporter activity","type":"related"}],"termid":"GO:0080139","terms_by_termid":{"GO:0080139":null}}


id: GO:0075530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a virus establishes a latent state within its host as an episome, where the viral genome remains silent in the cytoplasm or nucleus as linear structure.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of episomal latency","termid":"GO:0075720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of latency as a linear episome","synonyms":[{"name":"establishment of latency as a linear plasmid","type":"exact"},{"name":"establishment of linear plasmid latency","type":"exact"}],"termid":"GO:0075530"}


id: GO:0016740
data:
  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id: FYPO:0007429
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation does not occur during a cellular response to DNA damage.","definition_xrefs":["PMID:15805471","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein degradation during vegetative growth","termid":"FYPO:0000845"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"abolished protein degradation during cellular response to DNA damage","synonyms":[{"name":"abolished protein breakdown during cellular response to DNA damage","type":"exact"},{"name":"abolished protein catabolic process during cellular response to DNA damage","type":"exact"},{"name":"abolished protein catabolism during cellular response to DNA damage","type":"exact"},{"name":"abolished protein degradation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"abolished protein degradation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"protein degradation abolished during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0007429"}


id: PBO:0030366
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_multinucleate_multiseptate_vegetative_cell,_single_septa_between_nuclei","termid":"PBO:0030366"}


id: MONDO:1010465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Patent ductus arteriosus that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"patent ductus arteriosus, non-human animal","termid":"MONDO:1010017"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patent ductus arteriosus, dog","secondary_identifiers":["OMIA:000779-9615"],"termid":"MONDO:1010465","xrefs":{"Monarch":{"xref_id":"1010465"}}}


id: PBO:0112746
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSF-Responsive Gene","termid":"PBO:0112746"}


id: PBO:0070391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ROR1 antisense RNA 1","termid":"PBO:0070391"}


id: MONDO:0006271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low grade osteosarcoma arising from the medullary portion of the bone. It affects the long bones and is characterized by the presence of fibroblastic stroma and osteoid production. Pain and swelling are the usual sign and symptom. The prognosis is more favorable than conventional osteosarcoma.","definition_xrefs":["NCIT:C6474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteosarcoma","termid":"MONDO:0009807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"low grade central osteosarcoma","secondary_identifiers":["UMLS:C3814534","MEDGEN:818980","ONCOTREE:LGCOS","ICDO:9187/3"],"synonyms":[{"name":"intraosseous well-differentiated osteogenic sarcoma","type":"exact"},{"name":"intraosseous well-differentiated osteosarcoma","type":"exact"},{"name":"low grade central osteosarcoma","type":"exact"},{"name":"low grade intramedullary osteosarcoma","type":"exact"},{"name":"low-grade central osteosarcoma","type":"related"},{"name":"low-grade intramedullary osteosarcoma","type":"exact"}],"termid":"MONDO:0006271","xrefs":{"Monarch":{"xref_id":"0006271"}}}


id: GO:0100058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates phenotypic switching.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phenotypic switching by transcription from RNA polymerase II promoter (obsolete GO:0100058)","termid":"GO:0100058"}


id: PBO:0061561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase domain containing 3","termid":"PBO:0061561"}


id: FYPO:0006405
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the meiotic spindle pole body is broken into fragments.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragmented spindle pole body","termid":"FYPO:0006404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"fragmented meiotic spindle pole body","synonyms":[{"name":"fragmented meiotic SPB","type":"exact"},{"name":"fragmented spindle pole body during meiotic cell cycle","type":"exact"},{"name":"meiotic spindle pole body fragmentation","type":"exact"}],"termid":"FYPO:0006405"}


id: PBO:0042171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular communication network factor 2","termid":"PBO:0042171"}


id: PBO:0085162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleotide pyrophosphatase/phosphodiesterase; mediates extracellular nucleotide phosphate hydrolysis along with Npp1p and Pho5p; activity and expression enhanced during conditions of phosphate starvation; involved in spore wall assembly; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; NPP2 has a paralog, NPP1, that arose from the whole genome duplication; npp1 npp2 double mutant exhibits reduced dityrosine fluorescence relative to single mutants","termid":"PBO:0085162"}


id: PBO:0031564
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA_binding","termid":"PBO:0031564"}


id: GO:0045007
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96764],"is_not":false,"summary":null,"term":"GO:0045007"}]},"cv_name":"biological_process","definition":"The disruption of the bond between the sugar in the backbone and the A or G base, causing the base to be removed and leaving a depurinated sugar.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base-excision repair, AP site formation","termid":"GO:0006285"},{"relation_name":"is_a","term_name":"DNA modification","termid":"GO:0006304"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"depurination","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73927","Wikipedia:Depurination"],"termid":"GO:0045007","terms_by_termid":{"GO:0045007":null}}


id: GO:0009212
data:
  {"annotated_genes":["SJAG_00885","SJAG_04657","SJAG_04627","SJAG_04665"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109216],"is_not":false,"summary":null,"term":"GO:0009212"},{"annotations":[72796,94320,70219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine deoxyribonucleoside triphosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside triphosphate biosynthetic process","termid":"GO:0009148"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009211"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside triphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine deoxyribonucleoside triphosphate anabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleoside triphosphate biosynthesis","type":"exact"},{"name":"pyrimidine deoxyribonucleoside triphosphate formation","type":"exact"},{"name":"pyrimidine deoxyribonucleoside triphosphate synthesis","type":"exact"}],"termid":"GO:0009212","terms_by_termid":{"GO:0006235":null,"GO:0009212":null}}


id: GO:0030413
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A small peptide excreted by a naturally transformable bacterium (e.g. Bacillus subtilis) that transmits a signal required for the establishment of competence.","definition_xrefs":["PMID:7698645","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pheromone activity","termid":"GO:0005186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005186"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005186","GO:0098772","GO:0003674","GO:0140677","GO:0005488"],"is_obsolete":false,"name":"competence pheromone activity","termid":"GO:0030413"}


id: MONDO:0008149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteogenesis imperfecta found in a single South African family.","definition_xrefs":["PMID:7241530","DOID:0110335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta type 1","termid":"MONDO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta with opalescent teeth, blue sclerae and wormian bones but without fractures","secondary_identifiers":["GARD:15100","UMLS:C1833748","MEDGEN:331579","MESH:C563487","OMIM:166230"],"synonyms":[{"name":"osteogenesis imperfecta with opalescent teeth, blue sclerae and WORMIAN bones, but without fractures","type":"related"}],"termid":"MONDO:0008149","xrefs":{"Monarch":{"xref_id":"0008149"}}}


id: PBO:0046203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin B","termid":"PBO:0046203"}


id: RO:0002305
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of","termid":"RO:0002411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of,_negative_effect","termid":"RO:0002305"}


id: MONDO:1012487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"zinc deficiency-like syndrome, non-human animal","termid":"MONDO:1011758"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc deficiency-like syndrome, cattle","secondary_identifiers":["OMIA:001935-9913"],"termid":"MONDO:1012487","xrefs":{"Monarch":{"xref_id":"1012487"}}}


id: GO:0140623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly from its constituent parts of a type I pilus.","definition_xrefs":["PMID:1679330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilus assembly","termid":"GO:0009297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"type I pilus assembly","synonyms":[{"name":"T1P assembly","type":"broad"},{"name":"type 1 pilus biogenesis","type":"exact"},{"name":"type I fimbria assembly","type":"exact"},{"name":"type I fimbria biogenesis","type":"exact"},{"name":"type I fimbriae assembly","type":"exact"},{"name":"type I fimbriae biogenesis","type":"exact"},{"name":"type I fimbrial assembly","type":"exact"},{"name":"type I fimbrial biogenesis","type":"exact"},{"name":"type I fimbrium assembly","type":"exact"},{"name":"type I fimbrium biogenesis","type":"exact"}],"termid":"GO:0140623"}


id: GO:1990043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the endonucleolytic cleavage immediately 5' to pyrimidine dimers to products with 5'-phosphate.","definition_xrefs":["GOC:al","PMID:9708997"],"gene_count":0,"genotype_count":0,"name":"obsolete 5' deoxyribonuclease (pyrimidine dimer) activity (obsolete GO:1990043)","termid":"GO:1990043"}


id: GO:0103006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + (9R,10S)-dihydroxystearate + O2 + NADPH = 9,10,18-trihydroxystearate + H2O + NADP.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"9,10-dihydroxystearate hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-9807"],"termid":"GO:0103006"}


id: PBO:0078967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (AGA) 6-1","termid":"PBO:0078967"}


id: PBO:0001775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Cic1/Utp30 family (predicted)","termid":"PBO:0001775"}


id: PBO:0050337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 39","termid":"PBO:0050337"}


id: PBO:0089136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI inositol deacylase Bst1","termid":"PBO:0089136"}


id: PBO:0039669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 3 subunit sigma 2","termid":"PBO:0039669"}


id: PBO:0088789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rheb GAP, hamartin Tsc1","termid":"PBO:0088789"}


id: GO:0039649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a virus effects a change in host ubiquitin-protein ligase activity. Ubiquitin-protein ligase activity catalyzes the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.","definition_xrefs":["UniProtKB-KW:KW-1123"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host ubiquitin-protein ligase activity (obsolete GO:0039649)","synonyms":[{"name":"modulation of host E3 ubiquitin ligases by virus","type":"narrow"}],"termid":"GO:0039649"}


id: PBO:0088430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim16","termid":"PBO:0088430"}


id: PBO:0087101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein 28 (rp28) of the small (40S) ribosomal subunit; required for translational accuracy; homologous to mammalian ribosomal protein S23 and bacterial S12; RPS23B has a paralog, RPS23A, that arose from the whole genome duplication; deletion of both RPS23A and RPS23B is lethal","termid":"PBO:0087101"}


id: MONDO:0021017
data:
  {"annotated_genes":["SJAG_00924","SJAG_01872","SJAG_03056","SJAG_04821","SJAG_04728","SJAG_00826"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012518"},{"annotations":[87998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013883"},{"annotations":[87235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014543"},{"annotations":[87232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014542"},{"annotations":[87075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014590"},{"annotations":[87865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012157"},{"annotations":[88107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032596"}]},"cv_name":"mondo","definition":"A disease caused by dysfunction of synapses.","definition_xrefs":["Wikipedia:Synaptopathy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00826":null,"SJAG_00924":null,"SJAG_01872":null,"SJAG_03056":null,"SJAG_04728":null,"SJAG_04821":null},"genotype_count":0,"is_obsolete":false,"name":"synaptopathy","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0021017","terms_by_termid":{"MONDO:0012157":null,"MONDO:0012518":null,"MONDO:0013883":null,"MONDO:0014542":null,"MONDO:0014543":null,"MONDO:0014590":null,"MONDO:0032596":null},"xrefs":{"Monarch":{"xref_id":"0021017"}}}


id: MONDO:0000887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hepatic veno-occlusive disease (obsolete MONDO:0000887)","termid":"MONDO:0000887","xrefs":{"Monarch":{"xref_id":"0000887"}}}


id: PBO:0108578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome large subunit export factor","termid":"PBO:0108578"}


id: PBO:0043266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 25","termid":"PBO:0043266"}


id: MOD:01169
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-oxoalanine.","definition_xrefs":["RESID:AA0185","PubMed:14563551","PubMed:7628016","PubMed:8681943","DeltaMass:349","PubMed:9478923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3-oxoalanine","synonyms":[{"name":"(S)-2-amino-3-oxopropanoic acid","type":"exact"},{"name":"2-amino-3-oxopropionic acid","type":"exact"},{"name":"C(alpha)-formylglycine","type":"related"},{"name":"L-3-oxoalanine","type":"exact"},{"name":"L-amino-malonic acid semialdehyde","type":"exact"},{"name":"L-aminomalonaldehydic acid","type":"exact"},{"name":"L-serinesemialdehyde","type":"related"},{"name":"MOD_RES 3-oxoalanine (Cys)","type":"exact"},{"name":"MOD_RES 3-oxoalanine (Ser)","type":"exact"}],"termid":"MOD:01169"}


id: PBO:0075327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOGA family member 3","termid":"PBO:0075327"}


id: SO:0001831
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match to a protein HMM such as pfam.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_match","termid":"SO:0000349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein_hmm_match","synonyms":[{"name":"protein hmm match","type":"exact"}],"termid":"SO:0001831"}


id: PBO:0087917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor required for response to pheromones; also required during meiosis; exists in two forms, a slower-migrating form more abundant during vegetative growth and a faster-migrating form induced by pheromone; null mutant exhibits abnormal lipid metabolic phenotype","termid":"PBO:0087917"}


id: FYPO:0007806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a endodeoxyribonuclease activator is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0140656","PMID:33836577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal endodeoxyribonuclease activator activity","termid":"FYPO:0007806"}


id: MONDO:0014579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Senior-Loken syndrome in which the cause of the disease is a mutation in the WDR19 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Senior-Loken syndrome","termid":"MONDO:0017842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"Senior-Loken syndrome 8","secondary_identifiers":["GARD:16081","MEDGEN:905171","OMIM:616307","UMLS:C4225376"],"synonyms":[{"name":"SENIOR-Loken syndrome 8","type":"related"},{"name":"SLSN8","type":"related"},{"name":"Senior-Loken syndrome 8","type":"exact"},{"name":"Senior-Loken syndrome caused by mutation in WDR19","type":"exact"},{"name":"Senior-Loken syndrome type 8","type":"exact"},{"name":"WDR19 Senior-Loken syndrome","type":"exact"}],"termid":"MONDO:0014579","xrefs":{"Monarch":{"xref_id":"0014579"}}}


id: GO:0042940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the D-enantiomer of an amino acid into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"D-amino acid transport","termid":"GO:0042940"}


id: GO:0102695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + cis-zeatin = H+ + cis-zeatin-7-N-glucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:cis-zeatin 7-N-glucosyltransferase activity (obsolete GO:0102695)","termid":"GO:0102695"}


