# terms

id: GO:1901457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to acetate.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to acetate","termid":"GO:0010034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to acetate","termid":"GO:1901457"}


id: PBO:0079666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 14","termid":"PBO:0079666"}


id: GO:0050413
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + D-alanine + H2O = (6S)-5,6,7,8-tetrahydrofolate + 2-methylserine.","definition_xrefs":["EC:2.1.2.7","RHEA:10064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"D-alanine 2-hydroxymethyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01225","MetaCyc:D-ALANINE-HYDROXYMETHYLTRANSFERASE-RXN"],"synonyms":[{"name":"2-methylserine hydroxymethyltransferase activity","type":"related"},{"name":"5,10-methylenetetrahydrofolate:D-alanine 2-hydroxymethyltransferase activity","type":"related"},{"name":"D-alanine hydroxymethyltransferase activity","type":"exact"}],"termid":"GO:0050413"}


id: PBO:0056697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis initiator","termid":"PBO:0056697"}


id: MONDO:0054582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Townes-Brocks syndrome","termid":"MONDO:0007142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Townes-Brocks syndrome 2","secondary_identifiers":["MEDGEN:1381939","UMLS:C4479534","OMIM:617466"],"synonyms":[{"name":"TBS2","type":"related"},{"name":"Townes-Brocks syndrome 2","type":"exact"}],"termid":"MONDO:0054582","xrefs":{"Monarch":{"xref_id":"0054582"}}}


id: GO:0070865
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoskeletal part that consists of a microfilament-rich cone that forms round each nucleus in a spermatogenic cyst and translocates the length of the cyst during sperm individualization.","definition_xrefs":["PMID:9550716","PMID:15829565","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"sperm individualization complex","termid":"GO:0070864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"investment cone","synonyms":[{"name":"F-actin cone","type":"exact"}],"termid":"GO:0070865"}


id: PBO:0068595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 46, pseudogene","termid":"PBO:0068595"}


id: GO:0102522
data:
  {"annotated_genes":["SJAG_04735"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99983],"is_not":false,"summary":null,"term":"GO:0102522"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 4-demethylwyosine37 in tRNAPhe = 5'-S-methyl-5'-thioadenosine + H+ + 7-[(3S)-3-amino-3-carboxypropyl]-4-demethylwyosine37 in tRNAPhe.","definition_xrefs":["EC:2.5.1.114","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04735":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0016740","GO:0140098","GO:0003674","GO:0140101","GO:0003824","GO:0016765"],"is_obsolete":false,"name":"tRNA 4-demethylwyosine alpha-amino-alpha-carboxypropyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-14518","RHEA:36355"],"termid":"GO:0102522","terms_by_termid":{"GO:0102522":null}}


id: PBO:0061286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1 pseudogene 7","termid":"PBO:0061286"}


id: FYPO:0002092
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is abnormal during meiosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome organization","termid":"FYPO:0006759"},{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"},{"relation_name":"part_of","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0000641","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal meiotic sister chromatid cohesion","synonyms":[{"name":"abnormal sister chromatid cohesion during meiosis","type":"exact"}],"termid":"FYPO:0002092"}


id: GO:0036324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a vascular endothelial growth factor receptor-2 (VEGFR-2) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:bf","GOC:uh","PMID:12967471","Wikipedia:VEGF_receptors","Wikipedia:Kinase_insert_domain_receptor"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial growth factor receptor signaling pathway","termid":"GO:0048010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"vascular endothelial growth factor receptor-2 signaling pathway","synonyms":[{"name":"FLK-1 signaling pathway","type":"exact"},{"name":"KDR signaling pathway","type":"exact"},{"name":"VEGFR-2 signaling pathway","type":"exact"},{"name":"VEGFR2 signaling pathway","type":"exact"}],"termid":"GO:0036324"}


id: GO:0016442
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains members of the Argonaute family of proteins, small interfering RNAs (siRNAs) or microRNAs (miRNAs), and miRNA or siRNA-complementary mRNAs, in addition to a number of accessory factors. The RISC complex is involved in posttranscriptional repression of gene expression through downregulation of translation or induction of mRNA degradation.","definition_xrefs":["PMID:10749213","PMID:15145345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNAi effector complex","termid":"GO:0031332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RISC complex","secondary_identifiers":["Wikipedia:RNA-induced_silencing_complex","GO:0035068"],"synonyms":[{"name":"RNA-induced silencing complex","type":"exact"},{"name":"miRNP complex","type":"related"},{"name":"micro-ribonucleoprotein complex","type":"related"}],"termid":"GO:0016442"}


id: MONDO:0018267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined dystonia","termid":"MONDO:0020065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"combined cervical dystonia","secondary_identifiers":["Orphanet:370114"],"termid":"MONDO:0018267","xrefs":{"Monarch":{"xref_id":"0018267"}}}


id: GO:0030651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of peptides with antibiotic activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"peptide antibiotic metabolic process","termid":"GO:0030650"},{"relation_name":"is_a","term_name":"peptide biosynthetic process","termid":"GO:0043043"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide antibiotic biosynthetic process","synonyms":[{"name":"peptide antibiotic anabolism","type":"exact"},{"name":"peptide antibiotic biosynthesis","type":"exact"},{"name":"peptide antibiotic formation","type":"exact"},{"name":"peptide antibiotic synthesis","type":"exact"}],"termid":"GO:0030651"}


id: FYPO:0004869
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Crb2 accumulates is lower than normal during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah","PMID:15226425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased number of Crb2 foci during cellular response to ionizing radiation","synonyms":[{"name":"decreased number of Crb2 foci during cellular response to IR","type":"exact"},{"name":"decreased number of Crb2 foci during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"decreased number of Crb2 foci during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"reduced number of Crb2 foci during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0004869"}


id: PBO:0056014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM10, U7 small nuclear RNA associated","termid":"PBO:0056014"}


id: PBO:0001986
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.22.4","termid":"PBO:0001986"}


id: GO:0035915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components by an organism to form a pore complex in a membrane of another organism.","definition_xrefs":["GOC:bf","GOC:fj","PMID:21549739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of plasma membrane integrity in another organism","termid":"GO:0051673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pore formation in membrane of another organism","synonyms":[{"name":"pore complex assembly in other organism","type":"exact"},{"name":"pore complex biogenesis in other organism","type":"exact"},{"name":"pore formation in membrane of other organism","type":"exact"},{"name":"pore formation in other organism","type":"exact"},{"name":"pore-forming toxin activity","type":"related"}],"termid":"GO:0035915"}


id: PR:O14172
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- met8 gene.","definition_xrefs":["UniProtKB:O14172","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siroheme biosynthesis protein met8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.06c","synonyms":[{"name":"Spom972h-met8","type":"exact"}],"termid":"PR:O14172"}


id: PBO:0109221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex component 2","termid":"PBO:0109221"}


id: GO:0044118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The progression of the symbiont from an initial condition to a later condition, occurring in its host's cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete development of symbiont in host cell (obsolete GO:0044118)","termid":"GO:0044118"}


id: PBO:0069245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 500, pseudogene","termid":"PBO:0069245"}


id: GO:0023068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via the phloem.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via phloem (obsolete GO:0023068)","synonyms":[{"name":"signal transmission via phloem","type":"exact"}],"termid":"GO:0023068"}


id: GO:0042363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any of a diverse group of vitamins that are soluble in organic solvents and relatively insoluble in water.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat-soluble vitamin metabolic process","termid":"GO:0006775"},{"relation_name":"is_a","term_name":"vitamin catabolic process","termid":"GO:0009111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fat-soluble vitamin catabolic process","synonyms":[{"name":"fat-soluble vitamin breakdown","type":"exact"},{"name":"fat-soluble vitamin catabolism","type":"exact"},{"name":"fat-soluble vitamin degradation","type":"exact"}],"termid":"GO:0042363"}


id: GO:0032404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mismatch repair complex.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mismatch repair complex binding","termid":"GO:0032404"}


id: PBO:0080152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vascular cell adhesion molecule 1","termid":"PBO:0080152"}


id: GO:0099176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retrograde trans-synaptic signaling by a trans-synaptic complex.","definition_xrefs":["GOC:dos","PMID:23209303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of trans-synaptic signaling","termid":"GO:0099177"},{"relation_name":"regulates","term_name":"retrograde trans-synaptic signaling by trans-synaptic protein complex","termid":"GO:0098942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of retrograde trans-synaptic signaling by trans-synaptic protein complex","synonyms":[{"name":"regulation of trans-synaptic complex mediated retrograde trans-synaptic signaling","type":"related"}],"termid":"GO:0099176"}


id: PBO:0001317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase inhibitor associated with endocytosis (predicted)","termid":"PBO:0001317"}


id: MONDO:0008730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare form of congenital adrenal hyperplasia (CAH) characterized by glucocorticoid deficiency, hypergonadotrophic hypogonadism and severe hypokalemic hypertension.","definition_xrefs":["Orphanet:90793"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"},{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"congenital adrenal hyperplasia","termid":"MONDO:0018479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"congenital adrenal hyperplasia due to 17-alpha-hydroxylase deficiency","secondary_identifiers":["GARD:1469","ICD9:277.6","MEDGEN:82782","OMIM:202110","NANDO:2200373","icd11.foundation:587903316","UMLS:C0268285","NANDO:1200401","SCTID:124220008"],"synonyms":[{"name":"17,20-lyase deficiency, isolated","type":"related"},{"name":"17-Alpha-Hydroxylase deficiency","type":"related"},{"name":"17-Alpha-Hydroxylase/17,20-lyase deficiency, combined complete","type":"related"},{"name":"17-Alpha-Hydroxylase/17,20-lyase deficiency, combined partial","type":"related"},{"name":"17-alpha-hydroxylase/17,20-lyase deficiency","type":"exact"},{"name":"CAH due to 17-alpha-hydroxylase deficiency","type":"exact"},{"name":"adrenal hyperplasia 5","type":"related"},{"name":"adrenal hyperplasia, congenital, due to 17-ALPHA-HYDROXYLASE deficiency","type":"related"},{"name":"combined 17-hydroxylase/17,20-lyase deficiency","type":"exact"},{"name":"congenital adrenal hyperplasia type 5","type":"related"}],"termid":"MONDO:0008730","xrefs":{"Monarch":{"xref_id":"0008730"}}}


id: FYPO:0000698
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-7-methylguanine glycosylase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal DNA-7-methylguanine glycosylase activity","termid":"FYPO:0000697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"decreased DNA-7-methylguanine glycosylase activity","synonyms":[{"name":"reduced DNA-7-methylguanine glycosylase activity","type":"exact"}],"termid":"FYPO:0000698"}


id: PBO:0030553
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_lysine_import_during_nitrogen_starvation","termid":"PBO:0030553"}


id: PBO:0005354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component alpha 7, Pre10 (predicted)","termid":"PBO:0005354"}


id: GO:0050274
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: salicyl alcohol + UDP-D-glucose = H+ + salicin + UDP.","definition_xrefs":["EC:2.4.1.172","RHEA:11512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"salicyl-alcohol beta-D-glucosyltransferase activity","secondary_identifiers":["MetaCyc:SALICYL-ALCOHOL-GLUCOSYLTRANSFERASE-RXN","KEGG_REACTION:R03558"],"synonyms":[{"name":"UDP-glucose:salicyl-alcohol beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:salicyl alcohol phenyl-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:salicyl-alcohol beta-D-glucosyltransferase activity","type":"related"},{"name":"salicyl-alcohol b-D-glucosyltransferase activity","type":"exact"},{"name":"salicyl-alcohol glucosyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucose-salicyl alcohol 2-glucosyltransferase activity","type":"related"}],"termid":"GO:0050274"}


id: FYPO:0007726
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing L-phenylalanine as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000139","FYPO:0002058","FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"decreased cell population growth on phenylalanine nitrogen source","synonyms":[{"name":"decreased growth on phenylalanine nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on phenylalanine nitrogen source","type":"exact"},{"name":"growth defect, slow growth with phenylalanine nitrogen source","type":"related"},{"name":"reduced cell growth on phenylalanine nitrogen source","type":"related"},{"name":"slow cell growth on phenylalanine nitrogen source","type":"narrow"}],"termid":"FYPO:0007726"}


id: PBO:0090944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-FO ATP synthase chaperone Atp11","termid":"PBO:0090944"}


id: GO:2000320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 17 cell differentiation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T-helper cell differentiation","termid":"GO:0045623"},{"relation_name":"is_a","term_name":"negative regulation of T-helper 17 type immune response","termid":"GO:2000317"},{"relation_name":"is_a","term_name":"regulation of T-helper 17 cell differentiation","termid":"GO:2000319"},{"relation_name":"negatively_regulates","term_name":"T-helper 17 cell differentiation","termid":"GO:0072539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of T-helper 17 cell differentiation","synonyms":[{"name":"negative regulation of T-helper 17 cell development","type":"related"}],"termid":"GO:2000320"}


id: MONDO:0008169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondrodysplasia, rhizomelic, with callosal agenesis, thrombocytopenia, hydrocephalus, and hypertension","secondary_identifiers":["UMLS:C1833688","MESH:C563478","MEDGEN:322254","OMIM:166990"],"synonyms":[{"name":"osteochondrodysplasia with rhizomelia, platyspondyly, callosal agenesis, thrombocytopenia, hydrocephalus, and hypertension","type":"related"},{"name":"osteochondrodysplasia, rhizomelic, with callosal agenesis, thrombocytopenia, hydrocephalus, and hypertension","type":"exact"}],"termid":"MONDO:0008169","xrefs":{"Monarch":{"xref_id":"0008169"}}}


id: GO:1901851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 7,8-didemethyl-8-hydroxy-5-deazariboflavin.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00072","PMID:14593448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin metabolic process","termid":"GO:1901850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin catabolic process","synonyms":[{"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin breakdown","type":"exact"},{"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin catabolism","type":"exact"},{"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin degradation","type":"exact"},{"name":"coenzyme F0 breakdown","type":"exact"},{"name":"coenzyme F0 catabolic process","type":"exact"},{"name":"coenzyme F0 catabolism","type":"exact"},{"name":"coenzyme F0 degradation","type":"exact"}],"termid":"GO:1901851"}


id: MONDO:0006707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0006707 (obsolete MONDO:0006707)","termid":"MONDO:0006707","xrefs":{"Monarch":{"xref_id":"0006707"}}}


id: GO:0032070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of deoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of deoxyribonuclease activity (obsolete GO:0032070)","synonyms":[{"name":"DNase regulator","type":"related"},{"name":"deoxyribonuclease regulator","type":"related"}],"termid":"GO:0032070"}


id: MONDO:1010654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycythemia that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycythemia, non-human animal","termid":"MONDO:1010078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycythemia, domestic cat","secondary_identifiers":["OMIA:000809-9685"],"termid":"MONDO:1010654","xrefs":{"Monarch":{"xref_id":"1010654"}}}


id: GO:0052865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1-deoxy-D-xylulose 5-phosphate, the 5-phospho derivative of 1-deoxy-D-xylulose. 1-deoxy-D-xylulose 5-phosphate is an intermediate in the non-mevalonate pathway and a common precursor for isoprenoid, thiamin, and pyridoxol biosynthesis.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-deoxy-D-xylulose 5-phosphate metabolic process","termid":"GO:0052863"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1-deoxy-D-xylulose 5-phosphate biosynthetic process","synonyms":[{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate anabolism","type":"exact"},{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate biosynthesis","type":"exact"},{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate biosynthetic process","type":"exact"},{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate formation","type":"exact"},{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate synthesis","type":"exact"},{"name":"1-deoxy-D-xylulose 5-phosphate anabolism","type":"exact"},{"name":"1-deoxy-D-xylulose 5-phosphate biosynthesis","type":"exact"},{"name":"1-deoxy-D-xylulose 5-phosphate formation","type":"exact"},{"name":"1-deoxy-D-xylulose 5-phosphate synthesis","type":"exact"}],"termid":"GO:0052865"}


id: PBO:0076775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor and KH domain containing","termid":"PBO:0076775"}


id: PBO:0060976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroglobin","termid":"PBO:0060976"}


id: GO:2000570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T-helper 2 cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000516"},{"relation_name":"is_a","term_name":"regulation of T-helper 2 cell activation","termid":"GO:2000569"},{"relation_name":"positively_regulates","term_name":"T-helper 2 cell activation","termid":"GO:0035712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of T-helper 2 cell activation","synonyms":[{"name":"positive regulation of Th2 cell activation","type":"exact"}],"termid":"GO:2000570"}


id: PATO:0002466
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer resembling a keyhole.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keyhole shaped","termid":"PATO:0002466"}


id: PBO:0113369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates the vacuolar V-ATPase; regulates the assembly state of the V-ATPase holoenzyme, promoting complex disassembly, and counteracting the function of the RAVE complex; interacts with V-ATPase subunits; vacuolar membrane localization requires N-myristoylation and an assembled V-ATPase; GFP-fusion protein localizes to the cytoplasm; null mutation suppresses cdc13-1 temperature sensitivity; member of a conserved family of TLDc domain proteins found in eukaryotes","termid":"PBO:0113369"}


id: PBO:0002331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MutL family mismatch-repair protein Pms1","termid":"PBO:0002331"}


id: GO:0007121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of defining subsequent sites of bud emergence such that budding takes place at alternating poles of a budding cell.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular bud site selection","termid":"GO:0000282"},{"relation_name":"is_a","term_name":"cell budding","termid":"GO:0007114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007163","GO:0000281","GO:0007049"],"is_obsolete":false,"name":"bipolar cellular bud site selection","synonyms":[{"name":"bipolar bud site selection","type":"exact"},{"name":"bipolar budding","type":"broad"},{"name":"polar budding","type":"broad"}],"termid":"GO:0007121"}


id: PBO:0067977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 279","termid":"PBO:0067977"}


id: GO:0060995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another and contributes to the progression of the kidney over time, from its formation to the mature organ.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell-cell signaling involved in kidney development","synonyms":[{"name":"cell-cell signalling involved in kidney development","type":"exact"}],"termid":"GO:0060995"}


id: PBO:0036313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase-activating protein Spa2","termid":"PBO:0036313"}


id: PBO:0090544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER uridine diphosphate-glucose transmembrane transporter Hut1","termid":"PBO:0090544"}


id: MONDO:0033885
data:
  {"annotated_genes":["SJAG_06392","SJAG_01355","SJAG_01077","SJAG_02504","SJAG_06002","SJAG_03296","SJAG_02480","SJAG_03550","SJAG_01190","SJAG_04450","SJAG_06046","SJAG_04553","SJAG_04348","SJAG_03173","SJAG_03046","SJAG_00852","SJAG_03322"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033639"},{"annotations":[87566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033645"},{"annotations":[87565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033649"},{"annotations":[87577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033651"},{"annotations":[87571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033653"},{"annotations":[87573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033654"},{"annotations":[87574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033655"},{"annotations":[87579,87580,87578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033656"},{"annotations":[87556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033635"},{"annotations":[87553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033636"},{"annotations":[87562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033637"},{"annotations":[87563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033638"},{"annotations":[89068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0700250"},{"annotations":[88375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859160"},{"annotations":[88412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859520"},{"annotations":[87273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012992"}]},"cv_name":"mondo","definition":"A very rare inherited metabolic disorder characterized by deficiency of the enzyme cytochrome-C oxidase. It may be manifested as an isolated myopathy or a systemic disorder. Signs and symptoms include myotonia, dysfunction of the heart, kidney, and brain, and lactic acidosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex deficiency","termid":"MONDO:0000066"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00852":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_02480":null,"SJAG_02504":null,"SJAG_03046":null,"SJAG_03173":null,"SJAG_03296":null,"SJAG_03322":null,"SJAG_03550":null,"SJAG_04348":null,"SJAG_04450":null,"SJAG_04553":null,"SJAG_06002":null,"SJAG_06046":null,"SJAG_06392":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex IV deficiency, nuclear-type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C98910","Orphanet:254905","SCTID:67434000","OMIMPS:220110","DOID:3762","MESH:D030401"],"synonyms":[{"name":"COX deficiency","type":"related"},{"name":"Cox deficiency","type":"related"},{"name":"Cytochrome C Oxidase Deficiency","type":"exact"},{"name":"complex 4 mitochondrial respiratory chain deficiency","type":"related"},{"name":"complex IV deficiency","type":"related"},{"name":"cytochrome-C oxidase deficiency","type":"exact"},{"name":"cytochrome-c oxidase deficiency disease","type":"exact"},{"name":"deficiency of mitochondrial respiratory chain complex4","type":"related"},{"name":"isolated COX deficiency","type":"exact"},{"name":"isolated cytochrome C oxidase deficiency","type":"related"},{"name":"isolated mitochondrial respiratory chain complex IV deficiency","type":"exact"},{"name":"mitochondrial complex 4 deficiency","type":"related"},{"name":"mitochondrial complex IV deficiency","type":"exact"}],"termid":"MONDO:0033885","terms_by_termid":{"MONDO:0012992":null,"MONDO:0033635":null,"MONDO:0033636":null,"MONDO:0033637":null,"MONDO:0033638":null,"MONDO:0033639":null,"MONDO:0033645":null,"MONDO:0033649":null,"MONDO:0033651":null,"MONDO:0033653":null,"MONDO:0033654":null,"MONDO:0033655":null,"MONDO:0033656":null,"MONDO:0700250":null,"MONDO:0859160":null,"MONDO:0859520":null},"xrefs":{"Monarch":{"xref_id":"0033885"}}}


id: PBO:0072086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 16","termid":"PBO:0072086"}


id: MONDO:0054741
data:
  {"annotated_genes":["SJAG_00513"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86925],"is_not":false,"summary":null,"term":"MONDO:0054741"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00513":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 34","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17799","MEDGEN:1631307","OMIM:617872","Orphanet:457223","DOID:0111497","UMLS:C4693450"],"synonyms":[{"name":"COXPD34","type":"related"},{"name":"combined oxidative phosphorylation deficiency 34","type":"exact"},{"name":"syndromic sensorineural deafness due to COXPD","type":"exact"},{"name":"syndromic sensorineural deafness due to combined oxidative phosphorylation defect","type":"exact"},{"name":"syndromic sensorineural hearing loss due to COXPD","type":"exact"}],"termid":"MONDO:0054741","terms_by_termid":{"MONDO:0054741":null},"xrefs":{"Monarch":{"xref_id":"0054741"}}}


id: PBO:0004445
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRde-Like","termid":"PBO:0004445"}


id: PR:Q9USI6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin type-2 heavy chain 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:15184401","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin type-2 heavy chain 1","termid":"PR:000027728"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin type-2 heavy chain 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC645.05c","secondary_identifiers":["UniProtKB:Q9USI6","PR:000027729"],"synonyms":[{"name":"SPCC645.05C","type":"related"},{"name":"Spom972h-myo2","type":"exact"}],"termid":"PR:Q9USI6"}


id: PATO:0001094
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001094 absolute flux value (obsolete PATO:0001094)","termid":"PATO:0001094"}


id: PBO:0069595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 871, pseudogene","termid":"PBO:0069595"}


id: PBO:0049740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit delta","termid":"PBO:0049740"}


id: PBO:0069246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 501, pseudogene","termid":"PBO:0069246"}


id: PBO:0039836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP5 antisense RNA 1 (head to head)","termid":"PBO:0039836"}


id: PBO:0016536
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YBR121C","termid":"PBO:0016536"}


id: MONDO:0020152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare eyelid malformation (obsolete MONDO:0020152)","secondary_identifiers":["Orphanet:98561"],"synonyms":[{"name":"eyelid malformation","type":"related"}],"termid":"MONDO:0020152","xrefs":{"Monarch":{"xref_id":"0020152"}}}


id: MONDO:0010845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete macrothrombocytopenia and progressive sensorineural deafness (obsolete MONDO:0010845)","termid":"MONDO:0010845","xrefs":{"Monarch":{"xref_id":"0010845"}}}


id: MONDO:1012803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuroaxonal dystrophy that occurs in dogs due to a mutation in the MFN2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"neuroaxonal dystrophy, dog","termid":"MONDO:1011561"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroaxonal dystrophy, MFN2-related, dog","secondary_identifiers":["OMIA:002153-9615"],"synonyms":[{"name":"fetal-onset neuroaxonal dystrophy, dog","type":"related"}],"termid":"MONDO:1012803","xrefs":{"Monarch":{"xref_id":"1012803"}}}


id: PBO:0079909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1","termid":"PBO:0079909"}


id: FYPO:0005638
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the attachment of spindle microtubules to the kinetochore during the first meiotic nuclear division results in the connection of a single kinetochore to both spindle poles.","definition_xrefs":["PomBase:mah","PMID:21920317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal attachment of spindle microtubules to kinetochore during meiosis I","termid":"FYPO:0000209"},{"relation_name":"is_a","term_name":"merotelic kinetochore attachment","termid":"FYPO:0002651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"merotelic kinetochore attachment during meiosis I","synonyms":[{"name":"merotelic attachment of spindle microtubules to kinetochore during meiosis I","type":"exact"},{"name":"merotelic kinetochore attachment during M phase of meiosis I","type":"exact"},{"name":"merotelic kinetochore attachment during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0005638"}


id: SO:0001665
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sub element of the DCE core promoter element, with consensus sequence CTTC.","definition_xrefs":["PMID:16858867","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"DCE","termid":"SO:0001664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCE_SI","synonyms":[{"name":"DCE SI","type":"related"}],"termid":"SO:0001665"}


id: PBO:0030397
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_pheromone","termid":"PBO:0030397"}


id: MONDO:0030785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 75, with neuropsychiatric features and variant lissencephaly","secondary_identifiers":["OMIM:619827","DOID:0081234","MEDGEN:1808159","UMLS:C5676961"],"synonyms":[{"name":"MRT75","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 75, with neuropsychiatric features and variant lissencephaly","type":"exact"}],"termid":"MONDO:0030785","xrefs":{"Monarch":{"xref_id":"0030785"}}}


id: PBO:0109367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 4","termid":"PBO:0109367"}


id: GO:0030133
data:
  {"annotated_genes":["SJAG_04609","SJAG_02349","SJAG_01189","SJAG_02240","SJAG_02539","SJAG_02282","SJAG_04517","SJAG_01809","SJAG_05344","SJAG_00284","SJAG_01939","SJAG_03558","SJAG_04509","SJAG_00906","SJAG_00072","SJAG_00557","SJAG_04565","SJAG_01309","SJAG_03915","SJAG_03153","SJAG_00916","SJAG_00379","SJAG_05345","SJAG_03907","SJAG_01633","SJAG_04513","SJAG_00669","SJAG_04023"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76435,121510],"is_not":false,"summary":null,"term":"GO:0030133"},{"annotations":[114774,62747,114986,79402],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[58983,66588],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[77407,73103,74767,78873,73225,76603,80237,97412,78297,76961],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030127"},{"annotations":[68767,77882,72204,75655,103004],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0012507"},{"annotations":[89740,117468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070382"},{"annotations":[79081,73680],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034044"},{"annotations":[102114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030140"}]},"cv_name":"cellular_component","definition":"Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, from the Golgi to the ER (retrograde transport) or to destinations within or outside the cell.","definition_xrefs":["GOC:mah","PMID:22160157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"},{"relation_name":"part_of","term_name":"endomembrane system","termid":"GO:0012505"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00284":null,"SJAG_00379":null,"SJAG_00557":null,"SJAG_00669":null,"SJAG_00906":null,"SJAG_00916":null,"SJAG_01189":null,"SJAG_01309":null,"SJAG_01633":null,"SJAG_01809":null,"SJAG_01939":null,"SJAG_02240":null,"SJAG_02282":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_03907":null,"SJAG_03915":null,"SJAG_04023":null,"SJAG_04509":null,"SJAG_04513":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"transport vesicle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:30726171":null},"secondary_identifiers":["NIF_Subcellular:sao885490876"],"synonyms":[{"name":"Golgi to vacuole transport vesicle","type":"narrow"},{"name":"Golgi-vacuole transport vesicle","type":"narrow"},{"name":"constitutive secretory pathway transport vesicle","type":"exact"},{"name":"secretory vesicle","type":"related"}],"termid":"GO:0030133","terms_by_termid":{"GO:0012507":null,"GO:0030121":null,"GO:0030127":null,"GO:0030130":null,"GO:0030133":null,"GO:0030140":null,"GO:0034044":null,"GO:0070382":null}}


id: PBO:0034247
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_marker_for","termid":"PBO:0034247"}


id: FYPO:0007061
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin monomers associate to form a new branch on the side of an existing actin filament, mediated by the Arp2/3 protein complex, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cytoskeleton organization","termid":"FYPO:0001366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal Arp2/3 complex-mediated actin nucleation","synonyms":[{"name":"normal Arp2/3 complex-mediated actin filament nucleation","type":"exact"},{"name":"normal Arp2/3 complex-mediated actin nucleation during mitotic cell cycle","type":"related"},{"name":"normal Arp2/3 complex-mediated actin nucleation during vegetative growth","type":"exact"},{"name":"normal actin filament branch nucleation","type":"exact"},{"name":"normal branched actin filament nucleation","type":"exact"}],"termid":"FYPO:0007061"}


id: MONDO:0012105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small-vessel necrotizing vasculitis characterized by the association of inflammation of the vessel wall and peri- and extravascular granulomatosis.","definition_xrefs":["Orphanet:900"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"glomerulonephritis","termid":"MONDO:0002462"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"anti-neutrophil cytoplasmic antibody-associated vasculitis","termid":"MONDO:0015492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0005046"],"is_obsolete":false,"name":"granulomatosis with polyangiitis","secondary_identifiers":["ICD9:446.4","ICD10CM:M31.3","GARD:7880","MESH:D014890","SCTID:195353004","icd11.foundation:1020056159","MEDGEN:811223","NANDO:2200424","NORD:1840","NCIT:C123111","MedDRA:10047888","DOID:12132","OMIM:608710","NANDO:1201009","UMLS:C3495801","NANDO:1200263","EFO:0005297","NCIT:C3444"],"synonyms":[{"name":"ANCA-associated vasculitis","type":"broad"},{"name":"GPA","type":"exact"},{"name":"Midline granulomatosis","type":"related"},{"name":"Wegener granulomatosis","type":"exact"},{"name":"Wegener's granulomatosis","type":"exact"},{"name":"Wegener's syndrome","type":"exact"},{"name":"Wg","type":"broad"},{"name":"granulomatosis - Wegener's","type":"exact"},{"name":"granulomatosis with polyangiitis","type":"exact"},{"name":"necrotizing respiratory granulomatosis","type":"exact"},{"name":"pauci-immune glomerulonephritis associated with granulomatosis with polyangiitis","type":"exact"}],"termid":"MONDO:0012105","xrefs":{"Monarch":{"xref_id":"0012105"}}}


id: PBO:0041234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 68","termid":"PBO:0041234"}


id: PBO:0088017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type I transmembrane sorting receptor for multiple vacuolar hydrolases; cycles between the late-Golgi and prevacuolar endosome-like compartments","termid":"PBO:0088017"}


id: GO:0018772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,6-trioxoheptanoate + H2O = acetylpyruvate + acetate.","definition_xrefs":["UM-BBD_reactionID:r0094","MetaCyc:R306-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"trioxoheptanoate hydrolase activity","termid":"GO:0018772"}


id: PBO:0086766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; similar to DTDP-glucose 4,6-dehydratases; GFP-fusion protein localizes to the cytoplasm; up-regulated in response to the fungicide mancozeb; not essential for viability","termid":"PBO:0086766"}


id: FYECO:0000314
data:
  {"alleles_by_uniquename":{"SJAG_00124:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00124","name":"SJAG_00124delta","uniquename":"SJAG_00124:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01410:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01410","name":"rad51delta","uniquename":"SJAG_01410:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_02266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02266","name":"rad24delta","uniquename":"SJAG_02266:allele-1"},"SJAG_02576:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02576","name":"rad25delta","uniquename":"SJAG_02576:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02771:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02771","name":"rad1delta","uniquename":"SJAG_02771:allele-1"},"SJAG_03720:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03720","name":"tel1delta","uniquename":"SJAG_03720:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-3":{"allele_type":"other","description":"Pmk1 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camptothecin","type":"exact"}],"termid":"FYECO:0000314","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000314":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: MONDO:0022603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly tibial hypoplasia","termid":"MONDO:0022603","xrefs":{"Monarch":{"xref_id":"0022603"}}}


id: GO:1904910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of RNA localization to telomere.","definition_xrefs":["PMID:26586433","GO_REF:0000058","GOC:BHF","GOC:BHF_telomere","GOC:rph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"establishment of RNA localization to telomere","termid":"GO:0097694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of RNA localization to telomere","synonyms":[{"name":"regulation of establishment of RNA localisation to telomere","type":"exact"}],"termid":"GO:1904910"}


id: GO:0008546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Physical interaction between microtubules and chromatin via DNA binding proteins.","definition_xrefs":["PMID:10322137"],"gene_count":0,"genotype_count":0,"name":"obsolete microtubule/chromatin interaction (obsolete GO:0008546)","synonyms":[{"name":"microtubule/chromatin interaction","type":"exact"}],"termid":"GO:0008546"}


id: MONDO:1040020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infectious disease caused by methicillin-susceptible staphylococcus aureus.","definition_xrefs":["PMID:33144192","MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"staphylococcus aureus infection","termid":"MONDO:0005545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methicillin-susceptible staphylococcus aureus infectious disease","termid":"MONDO:1040020","xrefs":{"Monarch":{"xref_id":"1040020"}}}


id: PBO:0087022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L10; homologous to mammalian ribosomal protein L10 and bacterial L16; responsible for joining the 40S and 60S subunits; regulates translation initiation; similar to members of the QM gene family; protein abundance increases under DNA replication stress; mutations in human homolog implicated in T-cell acute lymphoblastic leukemia and also autism spectrum disorders (ASD); human RPL10 can complement yeast null mutant","termid":"PBO:0087022"}


id: PBO:0067832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 134","termid":"PBO:0067832"}


id: GO:0006291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The excision of damaged DNA during pyrimidine-dimer repair. A large multienzyme complex scans the DNA for a distortion in the double helix rather than for a specific base change. Once a bulky lesion is found, the phosphodiester backbone of the abnormal strand is cleaved on both sides of the distortion, and the portion of the strand containing the lesion (an oligonucleotide) is peeled away from the DNA double helix by a DNA helicase enzyme.","definition_xrefs":["ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrimidine-dimer repair, DNA damage excision (obsolete GO:0006291)","synonyms":[{"name":"pyrimidine-dimer repair, DNA damage excision","type":"exact"}],"termid":"GO:0006291"}


id: GO:0014808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol occurs via calcium release channels.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoplasmic reticulum calcium ion transport","termid":"GO:0070296"},{"relation_name":"is_a","term_name":"release of sequestered calcium ion into cytosol by endoplasmic reticulum","termid":"GO:1903514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"release of sequestered calcium ion into cytosol by sarcoplasmic reticulum","synonyms":[{"name":"release of sequestered calcium ion by sarcoplasmic reticulum into cytosol","type":"related"}],"termid":"GO:0014808"}


id: SO:1000081
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation that alters the rate a which transcription of the sequence occurs.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000081 sequence_variant_affecting_rate_of_transcription (obsolete SO:1000081)","synonyms":[{"name":"mutation affecting rate of transcription","type":"related"},{"name":"sequence variant affecting rate of transcription","type":"exact"}],"termid":"SO:1000081"}


id: GO:0006697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ecdysone, (22R)-2-beta,3-beta,14,22,25-pentahydroxycholest-7-en-6-one, an ecdysteroid found in insects.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ecdysone metabolic process","termid":"GO:0008205"},{"relation_name":"is_a","term_name":"sterol biosynthetic process","termid":"GO:0016126"},{"relation_name":"is_a","term_name":"ecdysteroid biosynthetic process","termid":"GO:0045456"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ecdysone biosynthetic process","synonyms":[{"name":"ecdysone anabolism","type":"exact"},{"name":"ecdysone biosynthesis","type":"exact"},{"name":"ecdysone formation","type":"exact"},{"name":"ecdysone synthesis","type":"exact"}],"termid":"GO:0006697"}


id: GO:0006165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into a nucleoside diphosphate to produce a nucleoside triphosphate.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleoside diphosphate phosphorylation (obsolete GO:0006165)","termid":"GO:0006165"}


id: PBO:0088746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3-H4 chaperone, HIR complex WD repeat subunit Hip2","termid":"PBO:0088746"}


id: PR:O14234
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sodium leak channel non-selective protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01143","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium-channel protein cch1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.01","secondary_identifiers":["UniProtKB:O14234"],"synonyms":[{"name":"Spom972h-NALCN","type":"exact"}],"termid":"PR:O14234"}


id: PBO:0087130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein and negative regulator of START; binds mRNA of the G1 cyclin CLN3 to stress granules for translational repression under conditions of stress; recruits the cyclin-dependent protein kinase Cdc28p to stress granules when stressful conditions are relieved, resulting in the dissolution of the granules, and resumption of translation; localizes to stress granules induced by glucose deprivation; protein abundance increases in response to DNA replication stress","termid":"PBO:0087130"}


id: MONDO:0010439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy, fatal fetal, due to myocardial calcification","secondary_identifiers":["MEDGEN:340013","OMIM:300829","MESH:C543241","UMLS:C1853577","OMIM:606163"],"synonyms":[{"name":"cardiomyopathy, fatal fetal, due to myocardial calcification","type":"exact"},{"name":"myocardial calcifications resulting in intrauterine fetal death","type":"related"},{"name":"myocardial calcifications resulting in intrauterine foetal death","type":"related"}],"termid":"MONDO:0010439","xrefs":{"Monarch":{"xref_id":"0010439"}}}


id: FYPO:0003639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell wall biogenesis is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall biogenesis","termid":"FYPO:0000174"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished cell wall biogenesis","synonyms":[{"name":"abolished fungal-type cell wall biogenesis","type":"exact"},{"name":"fungal-type cell wall biogenesis abolished","type":"exact"}],"termid":"FYPO:0003639"}


id: PR:P23635
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppa1 gene.","definition_xrefs":["UniProtKB:P23635","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minor serine/threonine-protein phosphatase PP2A-1 catalytic subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.15","synonyms":[{"name":"Spom972h-ppa1","type":"exact"}],"termid":"PR:P23635"}


id: GO:0016650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH group acts as a hydrogen or electron donor and reduces an acceptor other than quinone or similar compound, disulfide, NAD, NADP, oxygen or a flavin.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the CH-NH group of donors, other acceptors (obsolete GO:0016650)","synonyms":[{"name":"oxidoreductase activity, acting on the CH-NH group of donors, other acceptors","type":"exact"}],"termid":"GO:0016650"}


id: PBO:0117016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIRREL3 antisense RNA 4","termid":"PBO:0117016"}


id: PBO:0075378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 15","termid":"PBO:0075378"}


id: PBO:0051217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 6-1","termid":"PBO:0051217"}


id: GO:0070922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a single-stranded small RNA is incorporated within the RNA-initiated silencing complex (RISC). The assembly includes the maturation of the small RNA, the stabilization of the complex by accessory proteins of the RISC complex, duplex separation and the release of the second strand, forming a base-pairing complement complex that mediates gene silencing by small RNA.","definition_xrefs":["PMID:14512631","PMID:27184117","PMID:19239886","PMID:14744438","PMID:22233755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"regulatory ncRNA-mediated gene silencing","termid":"GO:0031047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"RISC complex assembly","secondary_identifiers":["GO:0070923","GO:0035087","GO:0035280"],"synonyms":[{"name":"RISC assembly","type":"related"},{"name":"gene silencing by RNA, small RNA loading onto RISC","type":"related"},{"name":"miRISC assembly","type":"broad"},{"name":"miRNA loading onto RISC","type":"narrow"},{"name":"siRNA loading onto RISC involved in RNA interference","type":"narrow"},{"name":"siRNA loading onto RISC involved in gene silencing by small RNA","type":"narrow"},{"name":"small RNA loading onto RISC","type":"related"}],"termid":"GO:0070922"}


id: MONDO:0011360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in variation between D7S554 and D7S2459 in the chromosome region 7q31.","definition_xrefs":["DOID:0110469","PMID:9887371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 14","secondary_identifiers":["MEDGEN:350931","GARD:22596","MESH:C566344","UMLS:C1863613","OMIM:603678"],"synonyms":[{"name":"DFNB14","type":"narrow"},{"name":"autosomal recessive deafness 14","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 14","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 14","type":"narrow"},{"name":"deafness, autosomal recessive 14","type":"narrow"}],"termid":"MONDO:0011360","xrefs":{"Monarch":{"xref_id":"0011360"}}}


id: MONDO:0005916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The clinical condition in which any part of the placenta invades and is inseparable from the uterine wall. (reVITALize)","definition_xrefs":["NCIT:C26856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"placenta disorder","termid":"MONDO:0005917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placenta accreta","secondary_identifiers":["DOID:4744","UMLS:C0032044","EFO:0007440","MESH:D010921","SCTID:70129008","Orphanet:662721","MEDGEN:10780","icd11.foundation:298160226"],"synonyms":[{"name":"Increta, placenta","type":"related"},{"name":"Percreta, placenta","type":"related"},{"name":"accreta, placenta","type":"related"},{"name":"placenta Increta","type":"related"},{"name":"placenta Percreta","type":"related"}],"termid":"MONDO:0005916","xrefs":{"Monarch":{"xref_id":"0005916"}}}


id: PBO:0113200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methionine aminopeptidase; catalyzes the cotranslational removal of N-terminal methionine from nascent polypeptides; function is partially redundant with that of Map2p; apo-Map1p is activated by the GTP-dependent zinc transferase Zng1p, especially during zinc starvation; interacts with Zng1p via an N-terminal Zn finger domain","termid":"PBO:0113200"}


id: PBO:0050425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein H2","termid":"PBO:0050425"}


id: PBO:0004272
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARC syndrome","termid":"PBO:0004272"}


id: MONDO:0023197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frontonasal dysplasia Klippel feil syndrome","termid":"MONDO:0023197","xrefs":{"Monarch":{"xref_id":"0023197"}}}


id: GO:1900443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to biotic stimulus.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900428"},{"relation_name":"regulates","term_name":"filamentous growth of a population of unicellular organisms in response to biotic stimulus","termid":"GO:0036180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","termid":"GO:1900443"}


id: GO:0052886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 9,9'-di-cis-zeta-carotene + a quinone = 7,9,9'-tri-cis-neurosporene + a quinol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 9,9'-dicis-carotene:quinone oxidoreductase activity (obsolete GO:0052886)","termid":"GO:0052886"}


id: PBO:0000656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-MIZ","termid":"PBO:0000656"}


id: PBO:0081864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 800","termid":"PBO:0081864"}


id: PBO:0004179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-Pro dipeptidase (predicted)","termid":"PBO:0004179"}


id: GO:0035064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a histone in which a residue has been modified by methylation.","definition_xrefs":["GOC:bf","PMID:14585615"],"gene_count":0,"genotype_count":0,"name":"obsolete methylated histone binding (obsolete GO:0035064)","termid":"GO:0035064"}


id: MONDO:0010517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the PIH1D3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 36, X-linked","secondary_identifiers":["UMLS:C4478372","GARD:15280","MEDGEN:1393107","DOID:0111850","OMIM:300991"],"synonyms":[{"name":"CILD36","type":"exact"},{"name":"PIH1D3 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 36, X-linked","type":"exact"},{"name":"ciliary dyskinesia, primary, 36, X-linked, X-linked recessive","type":"exact"},{"name":"ciliary dyskinesia, primary, 36, X-linked; CILD36","type":"exact"},{"name":"ciliary dyskinesia, primary, 36, with or without situs inversus","type":"related"},{"name":"primary ciliary dyskinesia caused by mutation in PIH1D3","type":"exact"}],"termid":"MONDO:0010517","xrefs":{"Monarch":{"xref_id":"0010517"}}}


id: MONDO:0008499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Short stature-wormian bones-dextrocardia syndrome is a multiple congenital anomalies syndrome characterized by wormian bones, dextrocardia and short stature due to a growth hormone deficiency. Additional manifestations that have been reported include brachycamptodactyly, kidney hypoplasia, bilateral cryptorchidism, midshaft hypospadias, imperforate anus/anorectal agenesis, body asymetry, mild developmental delay, hemimegalencephaly and facial dysmorphism, such as hypotelorism, downslanting palpebral fissures, low-set and posteriorly angulated ears, depressed nasal bridge, and microstomia.","definition_xrefs":["Orphanet:2863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature-wormian bones-dextrocardia syndrome","secondary_identifiers":["MESH:C566105","SCTID:763631006","GARD:4856","OMIM:185120","UMLS:C1861448","MEDGEN:350025"],"synonyms":[{"name":"Growth hormone deficiency with Wormian bones, Cardiac anomaly, and Brachycamptodactyly","type":"related"},{"name":"STRATTON-PARKER syndrome","type":"related"},{"name":"Stratton Parker syndrome","type":"related"},{"name":"Stratton-Parker syndrome","type":"exact"},{"name":"short stature wormian bones dextrocardia","type":"related"}],"termid":"MONDO:0008499","xrefs":{"Monarch":{"xref_id":"0008499"}}}


id: PBO:0088794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human GRASP protein family Golgi protein","termid":"PBO:0088794"}


id: PBO:0028472
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_succinate_dehydrogenase_(ubiquinone)_activity","termid":"PBO:0028472"}


id: PR:O60179
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- utp10 gene.","definition_xrefs":["UniProtKB:O60179","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23E6.04c","synonyms":[{"name":"Spom972h-utp10","type":"exact"},{"name":"U3 protein 10 required for transcription (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60179"}


id: PBO:0002368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterised trans-sulfuration enzyme (predicted)","termid":"PBO:0002368"}


id: GO:0018996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The periodic shedding of part or all of a collagen and cuticulin-based cuticle, which is then replaced by a new collagen and cuticulin-based cuticle. An example of this is found in the Nematode worm, Caenorhabditis elegans.","definition_xrefs":["GOC:jl","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle","termid":"GO:0042303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molting cycle, collagen and cuticulin-based cuticle","synonyms":[{"name":"collagen and cuticulin-based cuticle molting cycle","type":"exact"}],"termid":"GO:0018996"}


id: PBO:0090529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-C","termid":"PBO:0090529"}


id: GO:0004029
data:
  {"annotated_genes":["SJAG_03786","SJAG_02961","SJAG_00482"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77819,80390],"is_not":false,"summary":null,"term":"GO:0004029"},{"annotations":[102791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140087"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an aldehyde + H2O + NAD+ = a carboxylate + 2 H+ + NADH.","definition_xrefs":["RHEA:16185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase [NAD(P)+] activity","termid":"GO:0004030"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00482":null,"SJAG_02961":null,"SJAG_03786":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"aldehyde dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5696091","Reactome:R-HSA-6808487","Reactome:R-HSA-6808496","UM-BBD_reactionID:r0605","EC:1.2.1.3","Reactome:R-HSA-6813749","Reactome:R-HSA-389609","UM-BBD_reactionID:r0003","UM-BBD_reactionID:r0023","MetaCyc:ALDHDEHYDROG-RXN","Reactome:R-HSA-5692261","Reactome:R-HSA-380608","Reactome:R-HSA-71723","Reactome:R-HSA-71691","Wikipedia:Aldehyde_dehydrogenase_(NAD+)"],"synonyms":[{"name":"CoA-independent aldehyde dehydrogenase activity","type":"related"},{"name":"NAD-aldehyde dehydrogenase activity","type":"related"},{"name":"NAD-dependent 4-hydroxynonenal dehydrogenase activity","type":"related"},{"name":"NAD-dependent aldehyde dehydrogenase activity","type":"related"},{"name":"NAD-linked aldehyde dehydrogenase activity","type":"related"},{"name":"aldehyde dehydrogenase (NAD+)","type":"related"},{"name":"aldehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"m-methylbenzaldehyde dehydrogenase activity","type":"related"},{"name":"propionaldehyde dehydrogenase activity","type":"related"}],"termid":"GO:0004029","terms_by_termid":{"GO:0004029":null,"GO:0140087":null}}


id: MONDO:0019863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acro-renal-ocular syndrome (obsolete MONDO:0019863)","termid":"MONDO:0019863","xrefs":{"Monarch":{"xref_id":"0019863"}}}


id: GO:0001879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a yeast is received and converted into a molecular signal.","definition_xrefs":["PMID:14707091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to yeast","termid":"GO:0001878"},{"relation_name":"is_a","term_name":"detection of fungus","termid":"GO:0016046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of yeast","termid":"GO:0001879"}


id: GO:1901626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynaptic membrane organization.","definition_xrefs":["GOC:TermGenie","PMID:22426000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"postsynaptic membrane organization","termid":"GO:0001941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of postsynaptic membrane organization","synonyms":[{"name":"regulation of post-synaptic membrane organization","type":"exact"},{"name":"regulation of postsynaptic membrane organisation","type":"exact"}],"termid":"GO:1901626"}


id: MONDO:0033281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any polycystic kidney disease in which the cause of the disease is a mutation in the DZIP1L gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant polycystic kidney disease","termid":"MONDO:0004691"},{"relation_name":"is_a","term_name":"autosomal recessive polycystic kidney disease","termid":"MONDO:0009889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"polycystic kidney disease 5","secondary_identifiers":["UMLS:C4539903","DOID:0080273","MEDGEN:1624679","GARD:16242","OMIM:617610"],"synonyms":[{"name":"DZIP1L polycystic kidney disease","type":"exact"},{"name":"PKD5","type":"related"},{"name":"polycystic kidney disease 5","type":"exact"},{"name":"polycystic kidney disease caused by mutation in DZIP1L","type":"exact"}],"termid":"MONDO:0033281","xrefs":{"Monarch":{"xref_id":"0033281"}}}


id: GO:0052541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation, as part of the organization and biogenesis of the cell wall.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulose metabolic process","termid":"GO:0030243"},{"relation_name":"is_a","term_name":"cell wall beta-glucan metabolic process","termid":"GO:0034406"},{"relation_name":"part_of","term_name":"plant-type cell wall organization","termid":"GO:0009664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"plant-type cell wall cellulose metabolic process","synonyms":[{"name":"cell wall cellulose metabolism","type":"exact"},{"name":"cellulose and pectin-containing cell wall cellulose metabolic process","type":"exact"}],"termid":"GO:0052541"}


id: PBO:0052728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 20","termid":"PBO:0052728"}


id: GO:0160221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway in which the signal is transmitted via the activation of Rho activity. Rho is a family of small (~21 kDa) signaling G proteins that include RhoA, Cdc42, and Rac1.","definition_xrefs":["PMID:10836144","PMID:33849392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Rho-activating G protein-coupled receptor signaling pathway","termid":"GO:0160221"}


id: MONDO:0957225
data:
  {"annotated_genes":["SJAG_01403"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88361],"is_not":false,"summary":null,"term":"MONDO:0957225"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01403":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"neurodegeneration with developmental delay, early respiratory failure, myoclonic seizures, and brain abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5830433","MEDGEN:1841069","OMIM:620327"],"termid":"MONDO:0957225","terms_by_termid":{"MONDO:0957225":null},"xrefs":{"Monarch":{"xref_id":"0957225"}}}


id: PBO:0086314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with sequence similarity to acireductone synthases; involved in methionine salvage; found in both the cytoplasm and nucleus","termid":"PBO:0086314"}


id: PBO:0066437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"resistin","termid":"PBO:0066437"}


id: MONDO:0000989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A contagious viral infection caused by the mumps virus. Symptoms include swollen and tender parotid glands, fever, muscle aches and fatigue. Due to vaccination programs, mumps has become a rare disease.","definition_xrefs":["NCIT:C29888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Paramyxoviridae infectious disease","termid":"MONDO:0005896"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mumps infectious disease","secondary_identifiers":["ICD9:072","MEDGEN:44521","MESH:D009107","DOID:10264","MONDO:0005863","ICD10CM:B26","SCTID:36989005","MESH:D019351","UMLS:C0026780","EFO:0007383"],"synonyms":[{"name":"Mumps virus caused disease or disorder","type":"exact"},{"name":"Mumps virus disease or disorder","type":"exact"},{"name":"Mumps virus infectious disease","type":"exact"},{"name":"epidemic parotitis","type":"exact"},{"name":"mumps","type":"exact"},{"name":"mumps virus infectious disease","type":"related"}],"termid":"MONDO:0000989","xrefs":{"Monarch":{"xref_id":"0000989"}}}


id: PBO:0067112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 154, pseudogene","termid":"PBO:0067112"}


id: GO:0035145
data:
  {"annotated_genes":["SJAG_00888","SJAG_02879","SJAG_04025","SJAG_01852","SJAG_05014","SJAG_01252"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72233,78950,81985,94243,105094,107841],"is_not":false,"summary":null,"term":"GO:0035145"}]},"cv_name":"cellular_component","definition":"A multi-subunit complex deposited by the spliceosome upstream of messenger RNA exon-exon junctions. The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay.","definition_xrefs":["PMID:11743026","PMID:11532962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00888":null,"SJAG_01252":null,"SJAG_01852":null,"SJAG_02879":null,"SJAG_04025":null,"SJAG_05014":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"exon-exon junction complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"EJC","type":"exact"},{"name":"exon junction complex","type":"exact"}],"termid":"GO:0035145","terms_by_termid":{"GO:0035145":null}}


id: GO:1900526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of phosphatidylserine biosynthetic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","GOC:TermGenie","PMID:8056324"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphatidylserine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900526)","synonyms":[{"name":"negative regulation of phosphatidylserine anabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylserine biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylserine formation by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylserine synthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900526"}


id: PBO:0088398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin Snx3","termid":"PBO:0088398"}


id: PBO:0005121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding involved in ER to Golgi vesicle transport (predicted)","termid":"PBO:0005121"}


id: PBO:0045907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 5","termid":"PBO:0045907"}


id: GO:0070537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A protein deubiquitination process in which a K63-linked ubiquitin chain, i.e. a polymer of ubiquitin formed by linkages between lysine residues at position 63 of the ubiquitin monomers, is removed from a lysine residue in histone H2A or the variant H2AX.","definition_xrefs":["GOC:mah","PMID:19214193","PMID:19202061"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A K63-linked deubiquitination (obsolete GO:0070537)","termid":"GO:0070537"}


id: GO:0005313
data:
  {"annotated_genes":["SJAG_00522","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80914],"is_not":false,"summary":null,"term":"GO:0005313"},{"annotations":[98477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000515"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-glutamate from one side of a membrane to the other. L-glutamate is the anion of 2-aminopentanedioic acid.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acidic amino acid transmembrane transporter activity","termid":"GO:0015172"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-glutamate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5624256","Reactome:R-HSA-210444","Reactome:R-HSA-428052"],"synonyms":[{"name":"L-glutamate transporter activity","type":"broad"},{"name":"glutamate transmembrane transporter activity","type":"broad"},{"name":"glutamate/aspartate porter activity","type":"narrow"},{"name":"glutamate/aspartate:sodium symporter activity","type":"narrow"}],"termid":"GO:0005313","terms_by_termid":{"GO:0000515":null,"GO:0005313":null}}


id: PBO:0086206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with ribosomes; homolog of translationally controlled tumor protein; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and relocates to the mitochondrial outer surface upon oxidative stress; homolog of human TPT1","termid":"PBO:0086206"}


id: PBO:0051387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda constant 4 (pseudogene)","termid":"PBO:0051387"}


id: MONDO:0013983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive hypohidrotic ectodermal dysplasia","termid":"MONDO:0016619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0006025"],"is_obsolete":false,"name":"ectodermal dysplasia 11B, hypohidrotic/hair/tooth type, autosomal recessive","secondary_identifiers":["GARD:15885","UMLS:C3539920","DOID:0111654","MEDGEN:761671","OMIM:614941"],"synonyms":[{"name":"ECTD11B","type":"related"},{"name":"ectodermal dysplasia 11B, hypohidrotic/hair/tooth type, autosomal recessive","type":"exact"},{"name":"ectodermal dysplasia, anhidrotic","type":"related"},{"name":"ectodermal dysplasia, hypohidrotic","type":"related"}],"termid":"MONDO:0013983","xrefs":{"Monarch":{"xref_id":"0013983"}}}


id: MONDO:0006057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thymic lymphoma (obsolete MONDO:0006057)","termid":"MONDO:0006057","xrefs":{"Monarch":{"xref_id":"0006057"}}}


id: PBO:0079543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like modifier activating enzyme 5","termid":"PBO:0079543"}


id: PBO:0001399
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.16.1.18","termid":"PBO:0001399"}


id: GO:0031990
data:
  {"annotated_genes":["SJAG_01584"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74942],"is_not":false,"summary":null,"term":"GO:0031990"}]},"cv_name":"biological_process","definition":"The directed movement of mRNA from the nucleus to the cytoplasm during a heat stimulus, a temperature stimulus above the optimal temperature for the organism; in particular, a process that enables an organism withstand exposure to temperatures that would otherwise lethally impair poly(A)+ mRNA-nucleus export.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA export from nucleus","termid":"GO:0006406"},{"relation_name":"is_a","term_name":"cellular response to heat","termid":"GO:0034605"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01584":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006913","GO:0051179","GO:0006810","GO:0010467"],"is_obsolete":false,"name":"mRNA export from nucleus in response to heat stress","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"mRNA export from cell nucleus during heat stress","type":"exact"},{"name":"mRNA export from nucleus during heat stress","type":"related"}],"termid":"GO:0031990","terms_by_termid":{"GO:0031990":null}}


id: PBO:0117263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOUT family rRNA methyltransferase","termid":"PBO:0117263"}


id: MONDO:0100490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated congenital breast hypoplasia/aplasia","termid":"MONDO:0015855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breasts and/or nipples, aplasia or hypoplasia of, 1","secondary_identifiers":["OMIM:113700","GARD:15045"],"synonyms":[{"name":"BNAH1","type":"exact"},{"name":"amastia","type":"related"},{"name":"amazia","type":"related"},{"name":"athelia","type":"related"},{"name":"breasts and/or nipples, aplasia or hypoplasia of, 1","type":"exact"}],"termid":"MONDO:0100490","xrefs":{"Monarch":{"xref_id":"0100490"}}}


id: GO:0009855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of an organism's body plan or part of an organism with respect to a single longitudinal plane. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of symmetry","termid":"GO:0009799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of bilateral symmetry","synonyms":[{"name":"determination of bilateral asymmetry","type":"exact"}],"termid":"GO:0009855"}


id: PR:O13744
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsm7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S7, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.10c","synonyms":[{"name":"Spom972h-rsm7","type":"exact"}],"termid":"PR:O13744"}


id: GO:1902407
data:
  {"annotated_genes":["SJAG_00268","SJAG_03596","SJAG_03045","SJAG_04887","SJAG_03703","SJAG_00228","SJAG_01143","SJAG_01732","SJAG_02592","SJAG_01943","SJAG_00845","SJAG_00082","SJAG_02838","SJAG_04077","SJAG_02831","SJAG_01805","SJAG_02700","SJAG_04982","SJAG_00279","SJAG_02431","SJAG_03048","SJAG_01787","SJAG_04930","SJAG_00700","SJAG_04703","SJAG_02392","SJAG_04597","SJAG_01894","SJAG_04498","SJAG_03025"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70619,76710,77339,113853,121672,114294,99563,97191,68530,90121,100814,104498,120494,58748,99834,59919,112780,78088,74306,94423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903475"},{"annotations":[79195],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[92640,104300,105628,96256,97754,112744],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[91869,96298],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[95694,121595],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"Any assembly of mitotic cytokinetic actomyosin apparatus.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly of actomyosin apparatus involved in cytokinesis","termid":"GO:0000912"},{"relation_name":"is_a","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00228":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00700":null,"SJAG_00845":null,"SJAG_01143":null,"SJAG_01732":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_02392":null,"SJAG_02431":null,"SJAG_02592":null,"SJAG_02700":null,"SJAG_02831":null,"SJAG_02838":null,"SJAG_03025":null,"SJAG_03045":null,"SJAG_03048":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04077":null,"SJAG_04498":null,"SJAG_04597":null,"SJAG_04703":null,"SJAG_04887":null,"SJAG_04930":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0000281","GO:0007049"],"is_obsolete":false,"name":"assembly of actomyosin apparatus involved in mitotic cytokinesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:27059155":null,"PMID:32915139":null},"synonyms":[{"name":"actomyosin apparatus assembly involved in cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"cytokinesis, formation of actomyosin apparatus involved in mitotic cell cycle","type":"exact"},{"name":"formation of actomyosin apparatus involved in cytokinesis involved in mitotic cell cycle","type":"related"}],"termid":"GO:1902407","terms_by_termid":{"GO:0120306":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null}}


id: GO:0150106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to cell-cell junction.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:26706435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to cell-cell junction","termid":"GO:0150105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cell-cell junction","termid":"GO:0150106"}


id: PBO:0029007
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_splicing_of_long_introns","termid":"PBO:0029007"}


id: PBO:0068014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 319","termid":"PBO:0068014"}


id: PBO:0061220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 11","termid":"PBO:0061220"}


id: GO:0033833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxymethylfurfural + NADH + H+ = 2,5-bis-hydroxymethylfuran + NAD+.","definition_xrefs":["GOC:mah","PMID:15338422","PMID:16652391","GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"hydroxymethylfurfural reductase (NADH) activity","secondary_identifiers":["MetaCyc:RXN-10738"],"termid":"GO:0033833"}


id: RO:0002156
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"d derived_by_descent_from a if d is specified by some genetic program that is sequence-inherited-from a genetic program that specifies a.","direct_ancestors":[{"relation_name":"is_a","term_name":"evolutionarily_related_to","termid":"RO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"derived_by_descent_from","termid":"RO:0002156"}


id: GO:0033105
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The structure, composed of a monolayer of glycolipids with embedded proteins, that encloses the pigments and other contents of the chlorosome.","definition_xrefs":["PMID:17303128","PMID:14507718","PMID:14729689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle-enclosing lipid monolayer","termid":"GO:0034646"},{"relation_name":"part_of","term_name":"chlorosome","termid":"GO:0046858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"chlorosome envelope","synonyms":[{"name":"chlorosome membrane","type":"exact"}],"termid":"GO:0033105"}


id: PBO:0079679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3A pseudogene 1","termid":"PBO:0079679"}


id: PR:O74907
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A BRCA2 and CDKN1A-interacting protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04180","PANTHER:PTHR13261:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein bcp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.08","secondary_identifiers":["UniProtKB:O74907"],"synonyms":[{"name":"Spom972h-BCCIP","type":"exact"}],"termid":"PR:O74907"}


id: PATO:0001945
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A moderate yellow-orange to orange color.","definition_xrefs":["wordreference:wordreference"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yellow orange","termid":"PATO:0001944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ochre","termid":"PATO:0001945"}


id: MONDO:0016664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A skin hypersensitivity reaction due to exposure to a pharmacologic substance that is characterized by raised purpuric lesions, red macules, hemorrhagic blisters and ulcerations.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary vasculitis","termid":"MONDO:0018640"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drug-induced vasculitis","secondary_identifiers":["GARD:20697","NCIT:C112204","MEDGEN:573879","Orphanet:251325","UMLS:C0340672","icd11.foundation:1376183765","icd11.foundation:395268449"],"synonyms":[{"name":"drug induced cutaneous vasculitis","type":"exact"},{"name":"drug induced vasculitis","type":"exact"}],"termid":"MONDO:0016664","xrefs":{"Monarch":{"xref_id":"0016664"}}}


id: PBO:0047788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box D4 like 5","termid":"PBO:0047788"}


id: PBO:0045766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ECI1 antisense RNA 1","termid":"PBO:0045766"}


id: FYPO:0004276
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype in which any process of negative regulation of transcription is abnormal during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of transcription","termid":"FYPO:0004526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal negative regulation of transcription during G0","synonyms":[{"name":"abnormal down regulation of gene-specific transcription during G0","type":"related"},{"name":"abnormal down regulation of transcription, DNA-dependent, during G0","type":"exact"},{"name":"abnormal down-regulation of gene-specific transcription during G0","type":"related"},{"name":"abnormal down-regulation of transcription, DNA-dependent, during G0","type":"exact"},{"name":"abnormal downregulation of gene-specific transcription during G0","type":"related"},{"name":"abnormal downregulation of transcription, DNA-dependent, during G0","type":"exact"},{"name":"abnormal inhibition of gene-specific transcription during G0","type":"related"},{"name":"abnormal inhibition of transcription, DNA-dependent, during G0","type":"narrow"},{"name":"abnormal negative regulation of cellular transcription, DNA-dependent, during G0","type":"exact"},{"name":"abnormal negative regulation of gene-specific transcription during G0","type":"related"},{"name":"abnormal negative regulation of transcription during cell quiescence","type":"exact"},{"name":"abnormal negative regulation of transcription during quiescence","type":"exact"},{"name":"abnormal negative regulation of transcription, DNA-dependent, during G0","type":"exact"}],"termid":"FYPO:0004276"}


id: GO:0034382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a chylomicron remnant is removed from the blood via receptor-mediated endocytosis into liver cells and its constituent parts degraded.","definition_xrefs":["GOC:BHF","GOC:pde","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride-rich lipoprotein particle clearance","termid":"GO:0071830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chylomicron remnant clearance","secondary_identifiers":["Reactome:R-HSA-8964026"],"termid":"GO:0034382"}


id: GO:0060951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neural crest cell acquires the specialized features of a glial cell of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac glial cell differentiation","termid":"GO:0060950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest-derived cardiac glial cell differentiation","termid":"GO:0060951"}


id: FYPO:0000516
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear import is normal (i.e. indistinguishable from wild type). Nuclear import is the directed movement of any substance into the nucleus; import of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nucleocytoplasmic transport","termid":"FYPO:0008138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal nuclear import","synonyms":[{"name":"normal nuclear import during mitotic cell cycle","type":"related"},{"name":"normal nuclear import during vegetative growth","type":"exact"},{"name":"nuclear import: normal","type":"related"}],"termid":"FYPO:0000516"}


id: PBO:0058891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 11181","termid":"PBO:0058891"}


id: PBO:0000214
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene structure may be incorrect","termid":"PBO:0000214"}


id: PBO:0028193
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_azetidine-2-carboxylic_acid_acetyltransferase_activity","termid":"PBO:0028193"}


id: MONDO:0003198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma that arises from the small intestine. Histologic variants include mucinous adenocarcinoma and signet ring cell carcinoma.","definition_xrefs":["NCIT:C7888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"small intestine carcinoma","termid":"MONDO:0005522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"small intestine adenocarcinoma","secondary_identifiers":["GARD:19851","MEDGEN:82984","SCTID:424440001","UMLS:C0278803","DOID:4906","EFO:1000532","icd11.foundation:1369513329","Orphanet:104075"],"synonyms":[{"name":"adenocarcinoma - small intest.","type":"exact"},{"name":"adenocarcinoma of small bowel","type":"exact"},{"name":"adenocarcinoma of small intestine","type":"exact"},{"name":"adenocarcinoma of the small bowel","type":"exact"},{"name":"adenocarcinoma of the small intestine","type":"exact"},{"name":"small bowel adenocarcinoma","type":"exact"},{"name":"small intestinal adenocarcinoma","type":"exact"},{"name":"small intestine adenocarcinoma","type":"exact"}],"termid":"MONDO:0003198","xrefs":{"Monarch":{"xref_id":"0003198"}}}


id: PR:Q09679
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gmh1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase gmh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.11","synonyms":[{"name":"Spom972h-gmh1","type":"exact"}],"termid":"PR:Q09679"}


id: PBO:0044031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate proteoglycan family member 4B, pseudogene","termid":"PBO:0044031"}


id: GO:0060155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a platelet dense granule. A platelet dense granule is an electron-dense granule occurring in blood platelets that stores and secretes adenosine nucleotides and serotonin. They contain a highly condensed core consisting of serotonin, histamine, calcium, magnesium, ATP, ADP, pyrophosphate and membrane lysosomal proteins.","definition_xrefs":["PMID:11487378","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"platelet dense granule organization","synonyms":[{"name":"bull's eye body organization and biogenesis","type":"related"},{"name":"platelet dense body organization and biogenesis","type":"related"},{"name":"platelet dense granule organisation","type":"exact"},{"name":"platelet dense granule organization and biogenesis","type":"related"}],"termid":"GO:0060155"}


id: MONDO:0016463
data:
  {"annotated_genes":["SJAG_02330","SJAG_02208"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87929,87928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958013"}]},"cv_name":"mondo","definition":"A agammaglobulinemia that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"agammaglobulinemia","termid":"MONDO:0015977"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02208":null,"SJAG_02330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"syndromic agammaglobulinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C26931","GARD:20596","MEDGEN:1843258","UMLS:C5680904","Orphanet:229720"],"synonyms":[{"name":"hypogammaglobulinemia","type":"broad"},{"name":"syndrome associated with agammaglobulinemia","type":"exact"},{"name":"syndromic agammaglobulinemia","type":"exact"},{"name":"syndromic hypogammaglobulinemia","type":"exact"}],"termid":"MONDO:0016463","terms_by_termid":{"MONDO:0958013":null},"xrefs":{"Monarch":{"xref_id":"0016463"}}}


id: FYPO:0005851
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the biotinylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein biotinylation during vegetative growth","synonyms":[{"name":"abnormal protein biotinylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005851"}


id: SOFP:mol_type
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"The type of molecule","definition_xrefs":["so:sjc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mol_type","termid":"SOFP:mol_type"}


id: GO:0005646
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete importin (obsolete GO:0005646)","synonyms":[{"name":"importin","type":"exact"},{"name":"karyopherin","type":"exact"}],"termid":"GO:0005646"}


id: GO:0038099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a complex containing a type II activin receptor, a type I activin receptor, and a coreceptor of the EGF-CFC family (e.g. Cripto or Cryptic, in mammals).","definition_xrefs":["PMID:15062104","GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"nodal signaling pathway","termid":"GO:0038092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0023052","GO:0065003"],"is_obsolete":false,"name":"nodal receptor complex assembly","synonyms":[{"name":"ActRIIB.ALK4.EGF-CFC complex formation","type":"exact"},{"name":"nodal receptor complex formation","type":"exact"}],"termid":"GO:0038099"}


id: GO:0015551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of 3-hydroxyphenyl propanoate from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"3-hydroxyphenyl propanoate transmembrane transporter activity","synonyms":[{"name":"3-hydroxyphenyl propionate transmembrane transporter activity","type":"exact"}],"termid":"GO:0015551"}


id: PBO:0077215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery associated 7 homolog","termid":"PBO:0077215"}


id: PR:O14216
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication regulator sld2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PomBase:MAH","PMID:11937031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication regulator sld2","termid":"PR:000027523"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication regulator sld2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.11","secondary_identifiers":["PR:000027524","UniProtKB:O14216"],"synonyms":[{"name":"DNA replication regulator drc1","type":"exact"},{"name":"SPAC6B12.11","type":"related"},{"name":"Spom972h-SLD2","type":"exact"}],"termid":"PR:O14216"}


id: PBO:0073985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 24 member 5","termid":"PBO:0073985"}


id: MONDO:0011909
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant intermediate Charcot-Marie-Tooth disease type D is a rare hereditary motor and sensory neuropathy characterized by intermediate motor median nerve conduction velocities (usually between 25 and 45 m/s) and signs of both axonal degeneration and demyelination without onion bulbs in nerve biopsies. It presents with usual Charcot-Marie-Tooth disease clinical features of variable severity (progressive muscle weakness and atrophy of the distal extremities, distal sensory loss, reduced or absent deep tendon reflexes, and feet deformities). Other findings in some of the families include debilitating neuropathic pain and mild postural/kinetic upper limb tremor.","definition_xrefs":["Orphanet:100046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant intermediate Charcot-Marie-Tooth disease","termid":"MONDO:0019548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease dominant intermediate D","secondary_identifiers":["SCTID:765747004","MESH:C564333","OMIM:607791","DOID:0110200","GARD:9207","UMLS:C1843075","MEDGEN:334318"],"synonyms":[{"name":"CMTDID","type":"exact"},{"name":"Charcot Marie Tooth disease dominant intermediate 3","type":"related"},{"name":"Charcot-Marie-Tooth disease caused by mutation in MPZ","type":"exact"},{"name":"Charcot-Marie-Tooth disease dominant intermediate type D","type":"exact"},{"name":"Charcot-Marie-Tooth disease, dominant Intermediate type D","type":"exact"},{"name":"Charcot-Marie-Tooth disease, dominant intermediate D","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy dominant intermediate D","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, dominant Intermediate D","type":"related"},{"name":"DI-CMTD","type":"exact"},{"name":"Di-Cmtd","type":"related"},{"name":"MPZ Charcot-Marie-Tooth disease","type":"exact"},{"name":"MPZ-related intermediate Charcot-Marie-Tooth neuropathy","type":"related"},{"name":"autosomal dominant intermediate Charcot-Marie-Tooth disease type D","type":"exact"}],"termid":"MONDO:0011909","xrefs":{"Monarch":{"xref_id":"0011909"}}}


id: PBO:0046324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 2","termid":"PBO:0046324"}


id: MONDO:0016771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Annular atrophic lichen planus (LP) is a rare variant of cutaneous lichen planus characterized by both annular and atrophic LP features in the same lesion.","definition_xrefs":["Orphanet:254411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lichen planus","termid":"MONDO:0006572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"annular atrophic lichen planus","secondary_identifiers":["GARD:12676","UMLS:C4304037","SCTID:720493003","MEDGEN:929706"],"synonyms":[{"name":"annular atrophic LP","type":"exact"}],"termid":"MONDO:0016771","xrefs":{"Monarch":{"xref_id":"0016771"}}}


id: PBO:0048199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit alpha3","termid":"PBO:0048199"}


id: PBO:0069148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 399, pseudogene","termid":"PBO:0069148"}


id: GO:0004294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal tripeptide from a polypeptide at neutral pH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tripeptidyl-peptidase II activity (obsolete GO:0004294)","synonyms":[{"name":"tripeptidyl-peptidase II activity","type":"exact"}],"termid":"GO:0004294"}


id: GO:0033901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of poly(A), forming oligoribonucleotides and ultimately 3'-AMP.","definition_xrefs":["EC:3.1.27.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity producing 3'-phosphomonoesters, hydrolytic mechanism","termid":"GO:0016892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"ribonuclease V activity","secondary_identifiers":["MetaCyc:3.1.27.8-RXN"],"synonyms":[{"name":"endoribonuclease V activity","type":"related"}],"termid":"GO:0033901"}


id: GO:0047141
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cystine + 2 reduced glutathione = oxidized glutathione + 2 L-cysteine.","definition_xrefs":["MetaCyc:1.8.4.4-RXN","EC:1.8.4.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glutathione-cystine transhydrogenase activity","secondary_identifiers":["RHEA:12613"],"synonyms":[{"name":"GSH-cystine transhydrogenase","type":"related"},{"name":"NADPH-dependent GSH-cystine transhydrogenase","type":"related"},{"name":"glutathione:cystine oxidoreductase","type":"related"}],"termid":"GO:0047141"}


id: FYPO:0005054
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to latrunculin A is normal (i.e. indistinguishable from wild type). Normally, cell cycle progression is slowed or arrested transiently following exposure to latrunculin A.","definition_xrefs":["PomBase:mah","PMID:15537703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal cell cycle regulation during cellular response to latrunculin A","synonyms":[{"name":"normal cell cycle delay following latrunculin A exposure","type":"narrow"},{"name":"normal cell cycle regulation during cellular response to LatA","type":"exact"},{"name":"normal cell cycle regulation during cellular response to latrunculin A during mitotic cell cycle","type":"related"},{"name":"normal cell cycle regulation during cellular response to latrunculin A during vegetative growth","type":"exact"},{"name":"normal cell cycle regulation in response to latrunculin A","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to latrunculin A","type":"exact"}],"termid":"FYPO:0005054"}


id: MOD:00241
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-hydroxymethyl-L-asparagine.","definition_xrefs":["RESID:AA0236","Unimod:414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N4-hydroxymethyl-L-asparagine","synonyms":[{"name":"(2S)-2-amino-4-[(hydroxymethyl)amino]-4-oxobutanoic acid","type":"exact"},{"name":"2-amino-N4-hydroxymethylbutanediamic acid","type":"exact"},{"name":"Hydroxymethyl","type":"related"},{"name":"N(gamma)-hydroxymethylasparagine","type":"exact"},{"name":"N4-hydroxymethyl-L-asparagine","type":"exact"},{"name":"N4-hydroxymethylasparagine","type":"exact"},{"name":"beta-hydroxymethylasparagine","type":"exact"},{"name":"hydroxymethyl","type":"related"}],"termid":"MOD:00241"}


id: GO:0030478
data:
  {"annotated_genes":["SJAG_04624"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91233],"is_not":false,"summary":null,"term":"GO:0030478"}]},"cv_name":"cellular_component","definition":"Polarized accumulation of cytoskeletal proteins (including F-actin) and regulatory proteins in a cell. An example of this is the actin cap found in Saccharomyces cerevisiae.","definition_xrefs":["PMID:21494665","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cortical actin cytoskeleton","termid":"GO:0030864"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0005938","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"actin cap","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000143"],"termid":"GO:0030478","terms_by_termid":{"GO:0030478":null}}


id: MONDO:0020538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant dysgerminomatous germ cell tumor of ovary is the most common form of malignant germ cell tumor of ovary, arising from germ cells in the ovary, usually presenting during adolescence with pelvic mass, fever, vaginal bleeding, and acute abdomen and is characterized by bilaterality (around 10% of cases), association with dysgenetic gonads (5 to 10% of cases), elevated serum lactate dehydrogenase (LDH) and human chorionic gonadotrophin (hCG) (in the presence of syncitiotrophoblasts). Malignant dysgerminomatous germ cell tumor of ovary responds well to chemotherapy, potentially sparing patients from infertility and early mortality.","definition_xrefs":["Orphanet:99912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant germ cell tumor of ovary","termid":"MONDO:0018171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant dysgerminomatous germ cell tumor of ovary","secondary_identifiers":["GARD:19705"],"synonyms":[{"name":"dysgerminomatous germ cell cancer of ovary","type":"exact"},{"name":"dysgerminomatous germ cell cancer of the ovary","type":"exact"},{"name":"malignant dysgerminomatous germ cell tumor of the ovary","type":"related"},{"name":"malignant dysgerminomatous germ cell tumour of the ovary","type":"related"},{"name":"malignant ovarian dysgerminoma","type":"exact"}],"termid":"MONDO:0020538","xrefs":{"Monarch":{"xref_id":"0020538"}}}


id: PBO:0001669
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.33","termid":"PBO:0001669"}


id: GO:0097102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in the specification of identity of an endothelial tip cell. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment. An endothelial tip cell is a specialized endothelial cell localized to the leading edge of an angiogenic sprout that senses extracellular signals and guides the directed growth of blood vessels.","definition_xrefs":["CL:0000704","GOC:dgh","PMID:21521739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel endothelial cell fate specification","termid":"GO:0097101"},{"relation_name":"part_of","term_name":"sprouting angiogenesis","termid":"GO:0002040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial tip cell fate specification","synonyms":[{"name":"angiogenic tip cell fate specification","type":"exact"}],"termid":"GO:0097102"}


id: PBO:0054547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1947","termid":"PBO:0054547"}


id: PBO:0074448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small leucine rich protein 1","termid":"PBO:0074448"}


id: MONDO:1012246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rod-cone dysplasia, non-human animal","termid":"MONDO:1011982"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rod-cone dysplasia, dog","secondary_identifiers":["OMIA:000881-9615"],"termid":"MONDO:1012246","xrefs":{"Monarch":{"xref_id":"1012246"}}}


id: PBO:0081761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF691 divergent transcript","termid":"PBO:0081761"}


id: PBO:0034194
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-developmentally_replaces","termid":"PBO:0034194"}


id: PBO:0040380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5PO pseudogene 1","termid":"PBO:0040380"}


id: PBO:0031230
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_cytokinetic_cell_separation","termid":"PBO:0031230"}


id: GO:2001241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of extrinsic apoptotic signaling pathway in absence of ligand.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of extrinsic apoptotic signaling pathway","termid":"GO:2001238"},{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway in absence of ligand","termid":"GO:2001239"},{"relation_name":"positively_regulates","term_name":"extrinsic apoptotic signaling pathway in absence of ligand","termid":"GO:0097192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of extrinsic apoptotic signaling pathway in absence of ligand","secondary_identifiers":["Reactome:R-HSA-9603505"],"synonyms":[{"name":"positive regulation of dependence receptor signaling pathway","type":"related"},{"name":"positive regulation of extrinsic apoptosis in absence of ligand","type":"narrow"},{"name":"positive regulation of extrinsic apoptotic signalling pathway in absence of ligand","type":"exact"}],"termid":"GO:2001241"}


id: SO:0000581
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A structure consisting of a 7-methylguanosine in 5'-5' triphosphate linkage with the first nucleotide of an mRNA. It is added post-transcriptionally, and is not encoded in the DNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cap","secondary_identifiers":["http://en.wikipedia.org/wiki/5%27_cap"],"termid":"SO:0000581"}


id: PBO:0078359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 4-2","termid":"PBO:0078359"}


id: PR:Q09878
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC584.01c gene.","definition_xrefs":["UniProtKB:Q09878","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfite reductase [NADPH] flavoprotein component (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC584.01c","synonyms":[{"name":"Spom972h-SPCC584.01c","type":"exact"}],"termid":"PR:Q09878"}


id: GO:0043568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of insulin-like growth factor receptor signaling.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of insulin-like growth factor receptor signaling pathway","termid":"GO:0043567"},{"relation_name":"positively_regulates","term_name":"insulin-like growth factor receptor signaling pathway","termid":"GO:0048009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of insulin-like growth factor receptor signaling pathway","synonyms":[{"name":"activation of insulin-like growth factor receptor signaling pathway","type":"narrow"},{"name":"positive regulation of IGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of IGF receptor signalling pathway","type":"exact"},{"name":"positive regulation of insulin-like growth factor receptor signalling pathway","type":"exact"},{"name":"stimulation of insulin-like growth factor receptor signaling pathway","type":"narrow"},{"name":"up regulation of insulin-like growth factor receptor signaling pathway","type":"exact"},{"name":"up-regulation of insulin-like growth factor receptor signaling pathway","type":"exact"},{"name":"upregulation of insulin-like growth factor receptor signaling pathway","type":"exact"}],"termid":"GO:0043568"}


id: PBO:0039898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF2 antisense RNA 2","termid":"PBO:0039898"}


id: PBO:0038485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily B member 10","termid":"PBO:0038485"}


id: GO:0086018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from an SA node cardiomyocyte to an atrial cardiomyocyte.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in cardiac conduction","termid":"GO:0086019"},{"relation_name":"is_a","term_name":"SA node cell to atrial cardiac muscle cell communication","termid":"GO:0086070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"SA node cell to atrial cardiac muscle cell signaling","synonyms":[{"name":"SA node cardiac muscle cell to atrial cardiac muscle cell signalling","type":"exact"},{"name":"SA node cardiomyocyte to atrial cardiomyocyte signalling","type":"exact"},{"name":"SAN cardiomyocyte to atrial cardiomyocyte signalling","type":"exact"},{"name":"sinoatrial node cardiomyocyte to atrial cardiomyocyte signalling","type":"exact"},{"name":"sinus node cardiomyocyte to atrial cardiomyocyte signalling","type":"narrow"}],"termid":"GO:0086018"}


id: MONDO:0009805
data:
  {"annotated_genes":["SJAG_02413"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88097],"is_not":false,"summary":null,"term":"MONDO:0009805"}]},"cv_name":"mondo","definition":"Any osteogenesis imperfecta in which the cause of the disease is a mutation in the PPIB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta type 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C564921","GARD:10619","OMIM:259440","UMLS:C1850169","DOID:0110349","MEDGEN:376720"],"synonyms":[{"name":"OI 9","type":"related"},{"name":"OI type IX","type":"related"},{"name":"OI, type 9","type":"related"},{"name":"OI9","type":"exact"},{"name":"PPIB osteogenesis imperfecta","type":"exact"},{"name":"osteogenesis imperfecta caused by mutation in PPIB","type":"exact"},{"name":"osteogenesis imperfecta sillence type II/III without abnormality of type I collagen","type":"related"},{"name":"osteogenesis imperfecta type 9","type":"exact"},{"name":"osteogenesis imperfecta type IX","type":"exact"},{"name":"osteogenesis imperfecta, type 9","type":"related"},{"name":"osteogenesis imperfecta, type IX","type":"related"}],"termid":"MONDO:0009805","terms_by_termid":{"MONDO:0009805":null},"xrefs":{"Monarch":{"xref_id":"0009805"}}}


id: PBO:0073158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC61 translocon subunit gamma","termid":"PBO:0073158"}


id: PBO:0088946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific disordered protein","termid":"PBO:0088946"}


id: PBO:0012550
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septum promoting GTPase","termid":"PBO:0012550"}


id: PR:Q9HDU1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB2B2.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDU1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0494 membrane protein PB2B2.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.14c","synonyms":[{"name":"Spom972h-SPBPB2B2.14c","type":"exact"}],"termid":"PR:Q9HDU1"}


id: PBO:0042522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 2 associated protein 2","termid":"PBO:0042522"}


id: GO:0080108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the conversion of a S-alkylthiohydroximate to a thiohydroximate.","definition_xrefs":["PMID:14871316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"S-alkylthiohydroximate lyase activity","synonyms":[{"name":"S-alkylthiohydroximate C-S lyase activity","type":"narrow"}],"termid":"GO:0080108"}


id: GO:0043065
data:
  {"annotated_genes":["SJAG_03258","SJAG_00737"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75889,81379],"is_not":false,"summary":null,"term":"GO:0043065"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"},{"relation_name":"positively_regulates","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_03258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-193648","Reactome:R-HSA-205043"],"synonyms":[{"name":"activation of apoptosis","type":"narrow"},{"name":"positive regulation of apoptosis","type":"narrow"},{"name":"pro-apoptosis","type":"related"},{"name":"stimulation of apoptosis","type":"narrow"},{"name":"up regulation of apoptosis","type":"exact"},{"name":"up-regulation of apoptosis","type":"exact"},{"name":"upregulation of apoptosis","type":"exact"}],"termid":"GO:0043065","terms_by_termid":{"GO:0043065":null}}


id: GO:0030016
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contractile muscle fiber","termid":"GO:0043292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"myofibril","secondary_identifiers":["Wikipedia:Myofibril"],"termid":"GO:0030016"}


id: GO:0046225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a bacteriocin, any of a heterogeneous group of polypeptide antibiotics that are secreted by certain bacterial strains and are able to kill cells of other susceptible (frequently related) strains after adsorption at specific receptors on the cell surface. They include the colicins, and their mechanisms of action vary.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin catabolic process","termid":"GO:0009407"},{"relation_name":"is_a","term_name":"peptide antibiotic catabolic process","termid":"GO:0030652"},{"relation_name":"is_a","term_name":"bacteriocin metabolic process","termid":"GO:0046224"},{"relation_name":"is_a","term_name":"detoxification of nitrogen compound","termid":"GO:0051410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0098754"],"is_obsolete":false,"name":"bacteriocin catabolic process","synonyms":[{"name":"bacteriocin breakdown","type":"exact"},{"name":"bacteriocin catabolism","type":"exact"},{"name":"bacteriocin degradation","type":"exact"}],"termid":"GO:0046225"}


id: GO:0061623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galactose into pyruvate, with the concomitant production of a small amount of ATP.","definition_xrefs":["ISBN:0201090910","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose catabolic process","termid":"GO:0019388"},{"relation_name":"is_a","term_name":"glycolytic process through glucose-1-phosphate","termid":"GO:0061622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281","GO:0006091","GO:0005975"],"is_obsolete":false,"name":"glycolytic process from galactose","termid":"GO:0061623"}


id: PBO:0073091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit C","termid":"PBO:0073091"}


id: GO:0043502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle adaptation.","definition_xrefs":["GOC:go_curators","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of muscle system process","termid":"GO:0090257"},{"relation_name":"regulates","term_name":"muscle adaptation","termid":"GO:0043500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle adaptation","synonyms":[{"name":"regulation of muscle plasticity","type":"related"}],"termid":"GO:0043502"}


id: GO:0030566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of a posttranscriptional modification in an snRNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["GOC:mah","PMID:12457565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"},{"relation_name":"is_a","term_name":"RNA modification guide activity","termid":"GO:0030555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"snRNA modification guide activity","termid":"GO:0030566"}


id: SO:1001275
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Sequence coding for a short, single-stranded, DNA sequence via a retrotransposed RNA intermediate; characteristic of some microbial genomes.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retron","termid":"SO:1001275"}


id: GO:0006610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a ribosomal protein from the cytoplasm into the nucleus, across the nuclear membrane. At least some ribosomal proteins, including rpl12, uses the importin 11 pathway as a major route into the nucleus.","definition_xrefs":["PMID:11809816","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein import into nucleus","termid":"GO:0006606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0008150","GO:0006913","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"ribosomal protein import into nucleus","synonyms":[{"name":"ribosomal protein import into cell nucleus","type":"exact"},{"name":"ribosomal protein transport from cytoplasm to nucleus","type":"exact"},{"name":"ribosomal protein-nucleus import","type":"exact"}],"termid":"GO:0006610"}


id: PBO:0082135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin-related protein of the dynactin complex; required for spindle orientation and nuclear migration; forms actin-like short filament composed of 9 or 10 Arp1p monomers; putative ortholog of mammalian centractin","termid":"PBO:0082135"}


id: GO:0070687
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the cortical actin cytoskeleton that forms part of a macropinocytic cup.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cortical actin cytoskeleton","termid":"GO:0030864"},{"relation_name":"part_of","term_name":"macropinocytic cup","termid":"GO:0070685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0015629","GO:0005938"],"is_obsolete":false,"name":"macropinocytic cup cytoskeleton","synonyms":[{"name":"crown cytoskeleton","type":"exact"}],"termid":"GO:0070687"}


id: PBO:0000741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family","termid":"PBO:0000741"}


id: GO:1905792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mechanosensory behavior.","definition_xrefs":["GO_REF:0000058","PMID:8692859","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"is_a","term_name":"regulation of mechanosensory behavior","termid":"GO:1905790"},{"relation_name":"positively_regulates","term_name":"mechanosensory behavior","termid":"GO:0007638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mechanosensory behavior","synonyms":[{"name":"activation of behavioral response to mechanical stimulus","type":"narrow"},{"name":"activation of behavioural response to mechanical stimulus","type":"narrow"},{"name":"activation of mechanosensory behavior","type":"narrow"},{"name":"activation of mechanosensory behaviour","type":"narrow"},{"name":"positive regulation of behavioral response to mechanical stimulus","type":"exact"},{"name":"positive regulation of behavioural response to mechanical stimulus","type":"exact"},{"name":"positive regulation of mechanosensory behaviour","type":"exact"},{"name":"up regulation of behavioral response to mechanical stimulus","type":"exact"},{"name":"up regulation of behavioural response to mechanical stimulus","type":"exact"},{"name":"up regulation of mechanosensory behavior","type":"exact"},{"name":"up regulation of mechanosensory behaviour","type":"exact"},{"name":"up-regulation of behavioral response to mechanical stimulus","type":"exact"},{"name":"up-regulation of behavioural response to mechanical stimulus","type":"exact"},{"name":"up-regulation of mechanosensory behavior","type":"exact"},{"name":"up-regulation of mechanosensory behaviour","type":"exact"},{"name":"upregulation of behavioral response to mechanical stimulus","type":"exact"},{"name":"upregulation of behavioural response to mechanical stimulus","type":"exact"},{"name":"upregulation of mechanosensory behavior","type":"exact"},{"name":"upregulation of mechanosensory behaviour","type":"exact"}],"termid":"GO:1905792"}


id: PBO:0076900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 54","termid":"PBO:0076900"}


id: PR:O94362
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC428.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized GTP-binding protein C428.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.15","synonyms":[{"name":"Spom972h-SPBC428.15","type":"exact"}],"termid":"PR:O94362"}


id: PBO:0041524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 82","termid":"PBO:0041524"}


id: GO:0046301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 2-chloro-N-isopropylacetanilide, an acylanide herbicide widely used to protect corn, onion, cabbage, rose bushes, and ornamental plants.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-chloro-N-isopropylacetanilide biosynthetic process (obsolete GO:0046301)","synonyms":[{"name":"2-chloro-N-isopropylacetanilide anabolism","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide biosynthesis","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide biosynthetic process","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide formation","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide synthesis","type":"exact"}],"termid":"GO:0046301"}


id: GO:1900724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein adenylylation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"regulation of protein adenylylation","termid":"GO:1900722"},{"relation_name":"positively_regulates","term_name":"protein adenylylation","termid":"GO:0018117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein adenylylation","synonyms":[{"name":"activation of protein AMPylation","type":"exact"},{"name":"activation of protein adenylation","type":"exact"},{"name":"activation of protein adenylylation","type":"narrow"},{"name":"activation of protein amino acid adenylylation","type":"exact"},{"name":"positive regulation of protein AMPylation","type":"exact"},{"name":"positive regulation of protein adenylation","type":"exact"},{"name":"positive regulation of protein amino acid adenylylation","type":"exact"},{"name":"up regulation of protein AMPylation","type":"exact"},{"name":"up regulation of protein adenylation","type":"exact"},{"name":"up regulation of protein adenylylation","type":"exact"},{"name":"up regulation of protein amino acid adenylylation","type":"exact"},{"name":"up-regulation of protein AMPylation","type":"exact"},{"name":"up-regulation of protein adenylation","type":"exact"},{"name":"up-regulation of protein adenylylation","type":"exact"},{"name":"up-regulation of protein amino acid adenylylation","type":"exact"},{"name":"upregulation of protein AMPylation","type":"exact"},{"name":"upregulation of protein adenylation","type":"exact"},{"name":"upregulation of protein adenylylation","type":"exact"},{"name":"upregulation of protein amino acid adenylylation","type":"exact"}],"termid":"GO:1900724"}


id: FYPO:0000750
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to silver ions. Cells stop growing (and may die) at a concentration of silver ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to silver ions","synonyms":[{"name":"hypersensitive to silver ions","type":"exact"},{"name":"sensitive to silver","type":"related"},{"name":"sensitive to silver ions during mitotic cell cycle","type":"related"},{"name":"sensitive to silver ions during vegetative growth","type":"exact"}],"termid":"FYPO:0000750"}


id: GO:0160032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein activation cascade that generates the active Toll receptor ligand and consists of the cascade of enzymatic reactions initiated by extracellular recognition factors, leading to the cleavage of the inactive form of spatzle family of ligands.","definition_xrefs":["PMID:23632253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein activation cascade","termid":"GO:0072376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"Toll receptor ligand protein activation cascade","termid":"GO:0160032"}


id: PBO:0029260
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_leucine_import","termid":"PBO:0029260"}


id: PATO:0000357
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000357 protein concentration value (obsolete PATO:0000357)","termid":"PATO:0000357"}


id: PBO:0049694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"huntingtin associated protein 1","termid":"PBO:0049694"}


id: PR:G2TRJ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cmc4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRJ8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cx9C motif-containing protein 4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.22","synonyms":[{"name":"Spom972h-cmc4","type":"exact"},{"name":"transcripts altered in meiosis protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRJ8"}


id: PBO:0066731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 28","termid":"PBO:0066731"}


id: PBO:0088395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aminoacyl-tRNA hydrolase Pth3","termid":"PBO:0088395"}


id: GO:0005555
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete blood group antigen (obsolete GO:0005555)","synonyms":[{"name":"blood group antigen","type":"exact"}],"termid":"GO:0005555"}


id: GO:0141088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont initiates, promotes, or enhances the activation of autophagy in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pg"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated activation of host autophagy (obsolete GO:0141088)","synonyms":[{"name":"induction of host autophagy","type":"exact"},{"name":"positive regulation by symbiont of host autophagy","type":"exact"}],"termid":"GO:0141088"}


id: PBO:0052251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 20","termid":"PBO:0052251"}


id: PR:Q10498
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hgh1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein HGH1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.12c","synonyms":[{"name":"Spom972h-hgh1","type":"exact"}],"termid":"PR:Q10498"}


id: MONDO:0020815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Most common follicular odontogenic cyst. Occurs in relation to a partially erupted or unerupted tooth with at least the crown of the tooth to which the cyst is attached protruding into the cystic cavity. May give rise to an ameloblastoma and, in rare instances, undergo malignant transformation.","definition_xrefs":["MESH:D003803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odontogenic cyst","termid":"MONDO:0006328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dentigerous cyst","secondary_identifiers":["UMLS:C0011428","MEDGEN:8309","SCTID:9245008","NCIT:C173832"],"synonyms":[{"name":"Cyst, Dentigerous","type":"related"},{"name":"Cysts, Dentigerous","type":"related"},{"name":"Dentigerous Cyst","type":"related"},{"name":"Dentigerous Cysts","type":"related"},{"name":"Dentigerous cyst","type":"related"},{"name":"Dentigerous cyst of jaw","type":"related"},{"name":"Dentigerous odontogenic cyst","type":"related"},{"name":"dentigerous cyst","type":"exact"},{"name":"dentigerous cyst of jaw","type":"related"},{"name":"dentigerous odontogenic cyst","type":"related"},{"name":"follicular cyst of jaw","type":"related"}],"termid":"MONDO:0020815","xrefs":{"Monarch":{"xref_id":"0020815"}}}


id: PBO:0046759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 1","termid":"PBO:0046759"}


id: GO:0046329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the JNK cascade.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAPK cascade","termid":"GO:0043409"},{"relation_name":"is_a","term_name":"regulation of JNK cascade","termid":"GO:0046328"},{"relation_name":"negatively_regulates","term_name":"JNK cascade","termid":"GO:0007254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of JNK cascade","synonyms":[{"name":"down regulation of JNK cascade","type":"exact"},{"name":"down-regulation of JNK cascade","type":"exact"},{"name":"downregulation of JNK cascade","type":"exact"},{"name":"inhibition of JNK cascade","type":"narrow"}],"termid":"GO:0046329"}


id: PBO:0062875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTULIN divergent transcript","termid":"PBO:0062875"}


id: SO:0001596
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant within a transcript that changes the secondary structure of the RNA product.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_secondary_structure_variant","synonyms":[{"name":"transcript secondary structure variant","type":"exact"}],"termid":"SO:0001596"}


id: GO:0052913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + guanosine(966) in 16S rRNA = N(2)-methylguanosine(966) in 16S rRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (guanine-N2-)-methyltransferase activity","termid":"GO:0008990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0140098","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"16S rRNA (guanine(966)-N(2))-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN0-6515","RHEA:23548"],"termid":"GO:0052913"}


id: GO:0030241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins to form the myosin-based thick filaments of myofibrils in skeletal muscle.","definition_xrefs":["GOC:mah","GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle myosin thick filament assembly","termid":"GO:0071688"},{"relation_name":"part_of","term_name":"skeletal myofibril assembly","termid":"GO:0014866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0065003","GO:0007010","GO:0044085"],"is_obsolete":false,"name":"skeletal muscle myosin thick filament assembly","termid":"GO:0030241"}


id: PBO:0061144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME/NM23 family member 7","termid":"PBO:0061144"}


id: PR:O14346
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02965","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.15c","secondary_identifiers":["UniProtKB:O14346"],"synonyms":[{"name":"3-hydroxyacyl-CoA dehydratase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HACD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PTPLB","type":"exact"}],"termid":"PR:O14346"}


id: MONDO:0001891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant anus melanoma (obsolete MONDO:0001891)","termid":"MONDO:0001891","xrefs":{"Monarch":{"xref_id":"0001891"}}}


id: GO:0071838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population in the bone marrow.","definition_xrefs":["PMID:17063141","GOC:yaf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation in bone marrow","synonyms":[{"name":"bone marrow cell proliferation","type":"exact"}],"termid":"GO:0071838"}


id: GO:0060941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of an epicardial cell to a cardiac fibroblast cell fate and its capacity to differentiate into a cardiac fibroblast. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac fibroblast cell fate commitment","termid":"GO:0060937"},{"relation_name":"part_of","term_name":"epicardium-derived cardiac fibroblast cell differentiation","termid":"GO:0060938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cardiac fibroblast cell fate commitment","termid":"GO:0060941"}


id: PBO:0072803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"senescence associated long non-coding RNA 2","termid":"PBO:0072803"}


id: MONDO:0013173
data:
  {"annotated_genes":["SJAG_04358"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88318],"is_not":false,"summary":null,"term":"MONDO:0013173"}]},"cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the TRAPPC9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04358":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0006025"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 13","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:613192","MEDGEN:442564","MESH:C567714","DOID:0081098","GARD:22548","UMLS:C2750791"],"synonyms":[{"name":"MRT13","type":"related"},{"name":"TRAPPC9 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in TRAPPC9","type":"exact"},{"name":"intellectual disability, autosomal recessive 13","type":"exact"},{"name":"intellectual disability, autosomal recessive type 13","type":"exact"},{"name":"mental retardation, autosomal recessive 13","type":"related"},{"name":"mental retardation, autosomal recessive type 13","type":"exact"}],"termid":"MONDO:0013173","terms_by_termid":{"MONDO:0013173":null},"xrefs":{"Monarch":{"xref_id":"0013173"}}}


id: FYPO:0002835
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An RNA metabolism phenotype observed in the vegetative growth phase of the life cycle in which small interfering RNA transcripts derived from the centromere outer repeat region are absent.","definition_xrefs":["PMID:20211136","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centromeric outer repeat transcripts absent","termid":"FYPO:0000273"},{"relation_name":"is_a","term_name":"decreased centromeric outer repeat transcript-derived siRNA level","termid":"FYPO:0004201"},{"relation_name":"is_a","term_name":"siRNA absent from cell","termid":"FYPO:0006076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"centromeric outer repeat transcript-derived siRNA absent","synonyms":[{"name":"centromere outer repeat transcript-derived siRNA absent","type":"exact"},{"name":"centromeric outer repeat transcript-derived siRNA absent during mitotic cell cycle","type":"related"},{"name":"centromeric outer repeat transcript-derived siRNA absent during vegetative growth","type":"exact"},{"name":"centromeric outer repeat transcript-derived siRNA undetectable","type":"exact"},{"name":"siRNAs homologous to outer repeats absent","type":"exact"},{"name":"siRNAs homologous to outer repeats undetectable","type":"exact"}],"termid":"FYPO:0002835"}


id: GO:0031514
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium which may have a variable arrangement of axonemal microtubules and also contains molecular motors. It may beat with a whip-like pattern that promotes cell motility or transport of fluids and other cells across a cell surface, such as on epithelial cells that line the lumenal ducts of various tissues; or they may display a distinct twirling motion that directs fluid flow asymmetrically across the cellular surface to affect asymmetric body plan organization. Motile cilia can be found in single as well as multiple copies per cell.","definition_xrefs":["PMID:20144998","PMID:22118931","GOC:dgh","GOC:kmv","GOC:cilia","PMID:17009929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"motile cilium","secondary_identifiers":["GO:0031512","GO:0009434"],"synonyms":[{"name":"microtubule-based flagellum","type":"related"},{"name":"motile cilia","type":"exact"},{"name":"motile primary cilia","type":"related"},{"name":"motile primary cilium","type":"related"},{"name":"motile secondary cilium","type":"related"},{"name":"nodal cilium","type":"related"}],"termid":"GO:0031514"}


id: PBO:0076547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD DNase domain containing 1 pseudogene 1","termid":"PBO:0076547"}


id: GO:0004436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol = D-myo-inositol 1,2-cyclic phosphate + diacylglycerol.","definition_xrefs":["EC:4.6.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"phosphatidylinositol diacylglycerol-lyase activity","secondary_identifiers":["MetaCyc:3.1.4.10-RXN","RHEA:17093"],"synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol diacyl-sn-glycerol-lyase (1D-myo-inositol-1,2-cyclic-phosphate-forming)","type":"related"},{"name":"1-phosphatidyl-1D-myo-inositol diacylglycerol-lyase (1,2-cyclic-phosphate-forming)","type":"related"},{"name":"1-phosphatidyl-D-myo-inositol inositolphosphohydrolase (cyclic-phosphate-forming)","type":"related"},{"name":"1-phosphatidylinositol phosphodiesterase activity","type":"exact"},{"name":"monophosphatidylinositol phosphodiesterase activity","type":"broad"}],"termid":"GO:0004436"}


id: GO:0000719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The repair of UV-induced T-T, C-T and C-C dimers by directly reversing the damage to restore the original pyrimidines.","definition_xrefs":["PMID:10915863","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine dimer repair","termid":"GO:0006290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"photoreactive repair","synonyms":[{"name":"pyrimidine-dimer repair by photolyase","type":"narrow"}],"termid":"GO:0000719"}


id: PBO:0029240
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_telomeric_heterochromatin_during_vegetative_growth","termid":"PBO:0029240"}


id: GO:0100013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates fatty acid beta-oxidation.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of fatty acid beta-oxidation by transcription from RNA polymerase II promoter (obsolete GO:0100013)","termid":"GO:0100013"}


id: MONDO:0008649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"venular insufficiency, systemic","secondary_identifiers":["OMIM:192700","MESH:C566004","UMLS:C1860465","MEDGEN:348623"],"synonyms":[{"name":"venular insufficiency, systemic","type":"exact"}],"termid":"MONDO:0008649","xrefs":{"Monarch":{"xref_id":"0008649"}}}


id: PBO:0082599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clathrin coat accessory factor; involved in clathrin-mediated vesicle trafficking; may function to link the AP-1 clathrin adaptor complex with the Rab GTPase Ypt31p; has structural similarity to G-proteins; mouse homolog Aagab (p34) functionally complements irc6 null mutation; null mutant displays increased levels of spontaneous Rad52p foci","termid":"PBO:0082599"}


id: PBO:0067106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 148, pseudogene","termid":"PBO:0067106"}


id: SO:0000986
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The attribute of whether a nucleotide polymer is linear or circular.","direct_ancestors":[{"relation_name":"is_a","term_name":"polymer_attribute","termid":"SO:0000443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topology_attribute","synonyms":[{"name":"topology attribute","type":"exact"}],"termid":"SO:0000986"}


id: GO:0001576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a glycosphingolipid with a core structure of GalNAc-beta-(1->3)-Gal-alpha-(1->4)-Glc(I).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"globoside metabolic process","termid":"GO:0001575"},{"relation_name":"is_a","term_name":"glycosphingolipid biosynthetic process","termid":"GO:0006688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"globoside biosynthetic process","synonyms":[{"name":"globoside anabolism","type":"exact"},{"name":"globoside biosynthesis","type":"exact"},{"name":"globoside formation","type":"exact"},{"name":"globoside synthesis","type":"exact"}],"termid":"GO:0001576"}


id: PBO:0050264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 42","termid":"PBO:0050264"}


id: GO:0039606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts translation initiation in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host gene expression","termid":"GO:0039656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host translation initiation","synonyms":[{"name":"suppression by virus of host translation initiation","type":"narrow"}],"termid":"GO:0039606"}


id: PR:P87158
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps401 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S4-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.08","synonyms":[{"name":"Spom972h-rps401","type":"exact"}],"termid":"PR:P87158"}


id: PBO:0068948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 192, pseudogene","termid":"PBO:0068948"}


id: MONDO:0005601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive adenocarcinoma that arises from the ovary and is characterized by the presence of malignant epithelial cells that contain intracytoplasmic mucin. There is cellular atypia, increased layering of cells, complexity of glands, and papillary formations.","definition_xrefs":["NCIT:C5243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian adenocarcinoma","termid":"MONDO:0002752"},{"relation_name":"is_a","term_name":"mucinous adenocarcinoma","termid":"MONDO:0004957"},{"relation_name":"is_a","term_name":"mucinous ovarian cancer","termid":"MONDO:0024282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian mucinous adenocarcinoma","secondary_identifiers":["MEDGEN:235418","DOID:3606","icd11.foundation:869438441","EFO:0006462","GARD:21651","Orphanet:398961","UMLS:C1335167"],"synonyms":[{"name":"mucinous adenocarcinoma of ovary","type":"exact"},{"name":"mucinous adenocarcinoma of the ovary","type":"exact"},{"name":"mucinous carcinoma of ovary","type":"exact"},{"name":"mucinous carcinoma of the ovary","type":"exact"},{"name":"ovarian mucinous adenocarcinoma","type":"exact"},{"name":"ovarian mucinous carcinoma","type":"exact"},{"name":"ovary mucinous adenocarcinoma","type":"exact"}],"termid":"MONDO:0005601","xrefs":{"Monarch":{"xref_id":"0005601"}}}


id: GO:0032366
data:
  {"annotated_genes":["SJAG_01407","SJAG_00261","SJAG_01329"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62969,73702,78771],"is_not":false,"summary":null,"term":"GO:0032366"}]},"cv_name":"biological_process","definition":"The directed movement of sterols within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transport","termid":"GO:0015918"},{"relation_name":"is_a","term_name":"intracellular lipid transport","termid":"GO:0032365"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00261":null,"SJAG_01329":null,"SJAG_01407":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"intracellular sterol transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0032366","terms_by_termid":{"GO:0032366":null}}


id: GO:0007267
data:
  {"annotated_genes":["SJAG_00781"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117589],"is_not":false,"summary":null,"term":"GO:0007267"}]},"cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another. This process includes signal transduction in the receiving cell and, where applicable, release of a ligand and any processes that actively facilitate its transport and presentation to the receiving cell. Examples include signaling via soluble ligands, via cell adhesion molecules and via gap junctions.","definition_xrefs":["GOC:dos","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"is_a","term_name":"signaling","termid":"GO:0023052"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00781":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell-cell signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell-cell signalling","type":"exact"}],"termid":"GO:0007267","terms_by_termid":{"GO:0007267":null}}


id: PBO:0085443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyphosphatidylinositol phosphatase; dephosphorylates multiple phosphatidylinositol phosphates; involved in trans Golgi network-to-early endosome pathway; hyperosmotic stress causes translocation to actin patches; contains Sac1 and 5-ptase domains; INP53 has a paralog, INP52, that arose from the whole genome duplication","termid":"PBO:0085443"}


id: GO:1990839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an endothelin stimulus. Endothelin is any of three secretory vasoconstrictive peptides (endothelin-1, -2, -3).","definition_xrefs":["PMID:16365184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to endothelin","termid":"GO:1990839"}


id: PBO:0001810
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.2.21","termid":"PBO:0001810"}


id: MONDO:0018723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare vascular malformation of major vessels (obsolete MONDO:0018723)","secondary_identifiers":["Orphanet:458844"],"termid":"MONDO:0018723","xrefs":{"Monarch":{"xref_id":"0018723"}}}


id: PBO:0051195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR16-13 (non-functional)","termid":"PBO:0051195"}


id: PBO:0028377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_xanthine_DNA_N-glycosylase_activity","termid":"PBO:0028377"}


id: GO:0010753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of cGMP-mediated signaling.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cGMP-mediated signaling","termid":"GO:0010752"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"cGMP-mediated signaling","termid":"GO:0019934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cGMP-mediated signaling","synonyms":[{"name":"positive regulation of cGMP-mediated signalling","type":"exact"}],"termid":"GO:0010753"}


id: PBO:0058699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6827","termid":"PBO:0058699"}


id: PBO:0079096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 9-1","termid":"PBO:0079096"}


id: PBO:0034810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human MYH1 and MYH2 and MYH3 and MYH4and MYH6 and MYH7 and MYH7B and MYH8 and MYH9 and MYH10 and MYH11 and MYH13 MYH14 and MYH15 ortholog","termid":"PBO:0034810"}


id: GO:0006838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete allantoin/allantoate transport (obsolete GO:0006838)","synonyms":[{"name":"allantoin/allantoate transport","type":"exact"}],"termid":"GO:0006838"}


id: PBO:0052194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium calcium-activated channel subfamily M regulatory beta subunit 3","termid":"PBO:0052194"}


id: PBO:0116196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yippee-like protein, Moh1","termid":"PBO:0116196"}


id: PBO:0078177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 2-2","termid":"PBO:0078177"}


id: PBO:0062578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily G member 2","termid":"PBO:0062578"}


id: PBO:0052974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L3MBTL histone methyl-lysine binding protein 4","termid":"PBO:0052974"}


id: PBO:0072942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 21B","termid":"PBO:0072942"}


id: PBO:0064135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase M1/2 pseudogene 2","termid":"PBO:0064135"}


id: GO:0075045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont haustorium formation for nutrient acquisition from host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of biological process involved in symbiotic interaction","termid":"GO:0043903"},{"relation_name":"is_a","term_name":"modulation of formation of structure involved in a symbiotic process","termid":"GO:0044145"},{"relation_name":"regulates","term_name":"formation of haustorium for nutrient acquisition","termid":"GO:0052094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of formation by symbiont of haustorium for nutrient acquisition from host","termid":"GO:0075045"}


id: PBO:0116727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 11B, pseudogene","termid":"PBO:0116727"}


id: PBO:0075117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 166","termid":"PBO:0075117"}


id: PBO:0044060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin E/M","termid":"PBO:0044060"}


id: MONDO:0019666
data:
  {"annotated_genes":["SJAG_00084","SJAG_03475"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87135,87136],"is_not":false,"summary":null,"term":"MONDO:0019666"}]},"cv_name":"mondo","definition":"A spondyloepimetaphyseal dysplasia characterized by short stature, short and bowed lower limbs, mild brachydactyly, kyphoscoliosis, abnormal gait, enlarged knee joints, precocious osteoarthropathy, and normal intelligence.","definition_xrefs":["Orphanet:93282"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"mineral metabolism disease","termid":"MONDO:0000226"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00084":null,"SJAG_03475":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005066"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, PAPSS2 type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16813","DOID:0050812","UMLS:C2748515","MEDGEN:411234","SCTID:719172003","OMIM:612847"],"synonyms":[{"name":"BCYM4","type":"related"},{"name":"SEMD, Pakistani type","type":"related"},{"name":"brachyolmia 4 with mild epiphyseal and metaphyseal changes","type":"exact"},{"name":"brachyolmia type 4 with mild epiphyseal and metaphyseal changes","type":"related"},{"name":"spondylodysplasia and premature pubarche","type":"related"},{"name":"spondyloepimetaphyseal dysplasia Pakistani type","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia, Pakistani type","type":"exact"}],"termid":"MONDO:0019666","terms_by_termid":{"MONDO:0019666":null},"xrefs":{"Monarch":{"xref_id":"0019666"}}}


id: PBO:0056219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member C2","termid":"PBO:0056219"}


id: MOD:00738
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes an iron atom or a cluster containing iron for hydrogen atoms, or that coordinates an iron ion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron containing modified residue","synonyms":[{"name":"FeRes","type":"exact"}],"termid":"MOD:00738"}


id: PBO:0005535
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae SUP35","termid":"PBO:0005535"}


id: PBO:0060233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYB proto-oncogene, transcription factor","termid":"PBO:0060233"}


id: PBO:0027642
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_of_pheromone_response_gene_mRNA_during_vegetative_growth","termid":"PBO:0027642"}


id: GO:0050953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a sensory light stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of light stimulus","termid":"GO:0050953"}


id: MONDO:0004327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papilloma that arises from the ciliated respiratory mucosa that lines the sphenoid sinus. It is classified as inverted papilloma and oncocytic papilloma.","definition_xrefs":["NCIT:C6838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus Schneiderian papilloma","termid":"MONDO:0006353"},{"relation_name":"is_a","term_name":"benign neoplasm of sphenoidal sinus","termid":"MONDO:0021477"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphenoid sinus Schneiderian papilloma","secondary_identifiers":["DOID:7679","UMLS:C1336038","MEDGEN:277659"],"synonyms":[{"name":"Schneiderian papilloma of sphenoid sinus","type":"related"},{"name":"Schneiderian papilloma of the sphenoid sinus","type":"exact"},{"name":"sphenoid sinus Schneiderian papilloma","type":"exact"}],"termid":"MONDO:0004327","xrefs":{"Monarch":{"xref_id":"0004327"}}}


id: MONDO:0800378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"17,20-lyase deficiency, isolated","secondary_identifiers":["MEDGEN:479479","UMLS:C3277849"],"termid":"MONDO:0800378","xrefs":{"Monarch":{"xref_id":"0800378"}}}


id: PBO:0000778
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.99.18","termid":"PBO:0000778"}


id: MOD:00575
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:361","PubMed:15174056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized threonine biotinylated with biotin hydrazide","synonyms":[{"name":"Thrbiotinhydrazide","type":"related"},{"name":"oxidized Threonine biotinylated with biotin hydrazide","type":"related"}],"termid":"MOD:00575"}


id: MONDO:0044657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"MME-related autosomal dominant Charcot Marie Tooth disease type 2","secondary_identifiers":["UMLS:C5567450","GARD:17916","Orphanet:497757","MEDGEN:1798873"],"synonyms":[{"name":"MME-related autosomal dominant CMT2","type":"exact"},{"name":"MME-related autosomal dominant hereditary motor and sensory neuropathy type 2","type":"exact"}],"termid":"MONDO:0044657","xrefs":{"Monarch":{"xref_id":"0044657"}}}


id: PBO:0053524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 519","termid":"PBO:0053524"}


id: GO:0070214
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the protein-tyrosine kinase CSK and the GTPase-activating protein (GAP)-associated p62 (GAP-A.p62); may mediate translocation of proteins, including GAP and CSK, to membrane or cytoskeletal regions upon c-Src activation.","definition_xrefs":["PMID:7544435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cell leading edge","termid":"GO:0031252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CSK-GAP-A.p62 complex","termid":"GO:0070214"}


id: PBO:0075668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase long chain base subunit 1 pseudogene 3","termid":"PBO:0075668"}


id: GO:0032679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of TRAIL production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903555"},{"relation_name":"regulates","term_name":"TRAIL production","termid":"GO:0032639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of TRAIL production","secondary_identifiers":["GO:0045554"],"synonyms":[{"name":"regulation of TRAIL biosynthetic process","type":"narrow"}],"termid":"GO:0032679"}


id: GO:0045574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sterigmatocystin, a carcinogenic mycotoxin produced in high yields by strains of the common molds.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin catabolic process","termid":"GO:0009407"},{"relation_name":"is_a","term_name":"sterigmatocystin metabolic process","termid":"GO:0045460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754","GO:0019748"],"is_obsolete":false,"name":"sterigmatocystin catabolic process","synonyms":[{"name":"sterigmatocystin breakdown","type":"exact"},{"name":"sterigmatocystin catabolism","type":"exact"},{"name":"sterigmatocystin degradation","type":"exact"}],"termid":"GO:0045574"}


id: FYPO:0004267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which primary cell septum disassembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal septum disassembly","synonyms":[{"name":"normal septum disassembly during mitotic cell cycle","type":"related"},{"name":"normal septum disassembly during vegetative growth","type":"exact"}],"termid":"FYPO:0004267"}


id: PBO:0048816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 5","termid":"PBO:0048816"}


id: PR:O42917
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eso1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase eso1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.11","synonyms":[{"name":"ECO1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-eso1","type":"exact"},{"name":"sister chromatid cohesion protein eso1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42917"}


id: GO:0140829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(in) + HCO3-(out) = solute(out) + HCO3-(in).","definition_xrefs":["PMID:12440690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transporter activity","termid":"GO:0008509"},{"relation_name":"is_a","term_name":"bicarbonate transmembrane transporter activity","termid":"GO:0015106"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"bicarbonate:monoatomic anion antiporter activity","secondary_identifiers":["TC:2.A.31.1.1"],"synonyms":[{"name":"bicarbonate:anion antiporter activity","type":"broad"},{"name":"hydrogencarbonate:monoatomic anion antiporter activity","type":"exact"}],"termid":"GO:0140829"}


id: GO:1903995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of non-membrane spanning protein tyrosine kinase activity.","definition_xrefs":["GO_REF:0000059","PMID:10518561","GOC:BHF","GOC:nc","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of non-membrane spanning protein tyrosine kinase activity (obsolete GO:1903995)","synonyms":[{"name":"regulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"regulation of ATP:protein-tyrosine O-phosphotransferase activity","type":"broad"},{"name":"regulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"regulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"regulation of focal adhesion kinase activity","type":"narrow"},{"name":"regulation of janus kinase 1 activity","type":"narrow"},{"name":"regulation of janus kinase 2 activity","type":"narrow"},{"name":"regulation of janus kinase 3 activity","type":"narrow"},{"name":"regulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"regulation of p60c-src protein tyrosine kinase activity","type":"narrow"}],"termid":"GO:1903995"}


id: PBO:0043126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium and integrin binding family member 4","termid":"PBO:0043126"}


id: PBO:0067910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 212","termid":"PBO:0067910"}


id: PBO:0079168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocator protein","termid":"PBO:0079168"}


id: GO:0015925
data:
  {"annotated_genes":["SJAG_02949"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004557"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of galactosyl compounds, substances containing a group derived from a cyclic form of galactose or a galactose derivative.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02949":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"galactosidase activity","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0015925","terms_by_termid":{"GO:0004557":null}}


id: MONDO:0975848
data:
  {"annotated_genes":["SJAG_01010"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86880],"is_not":false,"summary":null,"term":"MONDO:0975848"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary neuromuscular disease","termid":"MONDO:0100546"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01010":null},"genotype_count":0,"is_obsolete":false,"name":"Morimoto-Ryu-Malicdan neuromuscular syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:621010"],"termid":"MONDO:0975848","terms_by_termid":{"MONDO:0975848":null},"xrefs":{"Monarch":{"xref_id":"0975848"}}}


id: PBO:0078010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF interacting protein","termid":"PBO:0078010"}


id: MONDO:0005711
data:
  {"annotated_genes":["SJAG_03786","SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859571"},{"annotations":[88625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010606"}]},"cv_name":"mondo","definition":"A posterolateral defect of the diaphragm that allows passage of abdominal viscera into the thorax, leading to respiratory insufficiency and persistent pulmonary hypertension with high mortality.","definition_xrefs":["Orphanet:2140"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"diaphragm disorder","termid":"MONDO:0005728"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_03786":null},"genotype_count":0,"is_obsolete":false,"name":"congenital diaphragmatic hernia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10010439","DOID:3827","MESH:D065630","NCIT:C98893","icd11.foundation:1414428936","NANDO:2200210","OMIMPS:142340","MEDGEN:68625","EFO:0007216","NANDO:1200911","UMLS:C0235833","MESH:D006551","GARD:1481","NANDO:2100040"],"synonyms":[{"name":"CDH","type":"exact"},{"name":"agenesis of hemidiaphragm","type":"related"},{"name":"congenital diaphragmatic defect","type":"related"},{"name":"congenital diaphragmatic hernia","type":"exact"},{"name":"diaphragmatic hernia","type":"broad"},{"name":"unilateral agenesis of diaphragm","type":"related"}],"termid":"MONDO:0005711","terms_by_termid":{"MONDO:0010606":null,"MONDO:0859571":null},"xrefs":{"Monarch":{"xref_id":"0005711"}}}


id: PBO:0082778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SSU processome and 90S preribosome; required for pre-18S rRNA processing, interacts with and controls the stability of Imp3p and Imp4p, essential for viability; similar to human Mpp10p","termid":"PBO:0082778"}


id: PBO:0060444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD kinase","termid":"PBO:0060444"}


id: GO:0046004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of progression through the syncytial blastoderm mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of syncytial blastoderm mitotic cell cycle","termid":"GO:0007348"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle, embryonic","termid":"GO:0045977"},{"relation_name":"positively_regulates","term_name":"syncytial blastoderm mitotic cell cycle","termid":"GO:0035186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of syncytial blastoderm mitotic cell cycle","synonyms":[{"name":"activation of progression through syncytial blastoderm mitotic cell cycle","type":"narrow"},{"name":"positive regulation of progression through syncytial blastoderm mitotic cell cycle","type":"exact"},{"name":"positive regulation of syncytial blastoderm cell cycle progression","type":"exact"},{"name":"stimulation of progression through syncytial blastoderm mitotic cell cycle","type":"narrow"},{"name":"up regulation of progression through syncytial blastoderm mitotic cell cycle","type":"exact"},{"name":"up-regulation of progression through syncytial blastoderm mitotic cell cycle","type":"exact"},{"name":"upregulation of progression through syncytial blastoderm mitotic cell cycle","type":"exact"}],"termid":"GO:0046004"}


id: GO:1990761
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A thin sheetlike process extended by the leading edge of an axonal or dendritic growth cone; contains a dense meshwork of actin filaments.","definition_xrefs":["PMID:25598228","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellipodium","termid":"GO:0030027"},{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"},{"relation_name":"part_of","term_name":"growth cone","termid":"GO:0030426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"growth cone lamellipodium","termid":"GO:1990761"}


id: PBO:0074407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMIM11 pseudogene 1","termid":"PBO:0074407"}


id: MONDO:1010318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"GAPO syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAPO syndrome, non-human animal","secondary_identifiers":["OMIA:002544"],"termid":"MONDO:1010318","xrefs":{"Monarch":{"xref_id":"1010318"}}}


id: GO:0052184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of hormones or growth regulators in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont hormone or growth regulator levels (obsolete GO:0052184)","synonyms":[{"name":"modulation by organism of symbiont hormone or growth regulator levels","type":"exact"}],"termid":"GO:0052184"}


id: GO:0016213
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the introduction of a cis double bond at carbon 6 of acyl-CoAs, introducing a new double bond between a pre-existing double bond and the carboxyl-end of the fatty acid. Specific reactions include: (9Z,12Z)-octadecadienoyl-CoA + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = (6Z,9Z,12Z)-octadecatrienoyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O; and (9Z,12Z,15Z)-octadecatrienoyl-CoA + 2 Fe(II)-[cytochrome b5] + O2 + 2 H+ = (6Z,9Z,12Z,15Z)-octadecatetraenoyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["PMID:12713571","PMID:7212717","EC:1.14.19.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA desaturase activity","termid":"GO:0016215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acyl-CoA 6-desaturase activity","secondary_identifiers":["MetaCyc:1.14.19.3-RXN","Reactome:R-HSA-2046084","Reactome:R-HSA-2046096","Reactome:R-HSA-2046099","Reactome:R-HSA-2046097"],"synonyms":[{"name":"delta(6)-acyl CoA desaturase activity","type":"broad"},{"name":"delta(6)-desaturase activity","type":"broad"},{"name":"delta(6)-fatty acyl-CoA desaturase activity","type":"broad"},{"name":"delta6-acyl CoA desaturase activity","type":"related"},{"name":"delta6-desaturase activity","type":"related"},{"name":"delta6-fatty acyl-CoA desaturase activity","type":"related"},{"name":"fatty acid 6-desaturase activity","type":"broad"},{"name":"fatty acid delta(6)-desaturase activity","type":"broad"},{"name":"fatty acid delta6-desaturase activity","type":"related"},{"name":"linoleate desaturase activity","type":"related"},{"name":"linoleic acid desaturase activity","type":"related"},{"name":"linoleic desaturase activity","type":"related"},{"name":"linoleoyl CoA desaturase activity","type":"exact"},{"name":"linoleoyl-CoA desaturase activity","type":"exact"},{"name":"linoleoyl-coenzyme A desaturase activity","type":"exact"},{"name":"long-chain fatty acid delta(6)-desaturase activity","type":"broad"},{"name":"long-chain fatty acid delta6-desaturase activity","type":"related"}],"termid":"GO:0016213"}


id: GO:0033934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-alpha-D-glucosidic linkages in amylaceous polysaccharides, to remove successive maltotriose residues from the non-reducing chain ends.","definition_xrefs":["EC:3.2.1.116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"glucan 1,4-alpha-maltotriohydrolase activity","secondary_identifiers":["MetaCyc:3.2.1.116-RXN"],"synonyms":[{"name":"1,4-alpha-D-glucan maltotriohydrolase activity","type":"related"},{"name":"exo-maltotriohydrolase activity","type":"related"},{"name":"maltotriohydrolase activity","type":"related"}],"termid":"GO:0033934"}


id: PBO:0012003
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-consensus GAG acceptor","termid":"PBO:0012003"}


id: PBO:0034538
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_phosphorylation_during_cellular_response_to_bleomycin","termid":"PBO:0034538"}


id: PBO:0042044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 97","termid":"PBO:0042044"}


id: PBO:0017485
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-bearer_of","termid":"PBO:0017485"}


id: PBO:0031176
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_catastrophe,_normal_size_cell","termid":"PBO:0031176"}


id: PBO:0059464
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutS homolog 3","termid":"PBO:0059464"}


id: SO:1000018
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Change of a pyrimidine nucleotide, C or T, into a purine nucleotide, A or G.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transversion","termid":"SO:1000017"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrimidine_to_purine_transversion","synonyms":[{"name":"pyrimidine to purine transversion","type":"exact"}],"termid":"SO:1000018"}


id: MONDO:0005891
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id: GO:0043261
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha2, beta1 and gamma3 polypeptide chains.","definition_xrefs":["GOC:jl","PMID:10842354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"laminin-12 complex","synonyms":[{"name":"laminin-213 complex","type":"exact"}],"termid":"GO:0043261"}


id: GO:1905705
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id: PBO:0058723
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id: GO:0046649
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id: MONDO:0044687
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare inflammatory optic neuropathy characterized by severe and persistent pain followed by subacute visual loss, a relapsing-remitting course, and steroid-dependence. Involvement of both optic nerves is common and is usually sequential. Serum antibodies against aquaporin 4 are absent in most cases. Magnetic resonance imaging shows contrast enhancement of the acutely inflamed optic nerves.","definition_xrefs":["Orphanet:499085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune/inflammatory optic neuropathy","termid":"MONDO:0044685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"chronic relapsing inflammatory optic neuropathy","secondary_identifiers":["UMLS:C5567234","GARD:22038","MEDGEN:1798657"],"synonyms":[{"name":"CRION","type":"exact"},{"name":"chronic recurrent isolated optic neuritis","type":"exact"}],"termid":"MONDO:0044687","xrefs":{"Monarch":{"xref_id":"0044687"}}}


id: PBO:0060129
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 30","termid":"PBO:0060129"}


id: GO:0031443
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within fast-twitch skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The fast-twitch skeletal muscle is characterized by fast time parameters, high force development and fatiguability.","definition_xrefs":["GOC:mah","GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"twitch skeletal muscle contraction","termid":"GO:0014721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fast-twitch skeletal muscle fiber contraction","synonyms":[{"name":"fast-twitch skeletal fiber contraction","type":"exact"},{"name":"fast-twitch skeletal fibre contraction","type":"exact"},{"name":"fast-twitch skeletal muscle fibre contraction","type":"exact"},{"name":"fast-twitch skeletal myofiber contraction","type":"exact"},{"name":"fast-twitch skeletal myofibre contraction","type":"exact"}],"termid":"GO:0031443"}


id: FYPO:0007077
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id: GO:0009760
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id: MONDO:0009121
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id: MONDO:0005560
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id: PBO:0028024
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id: PBO:0042436
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 antisense RNA 1","termid":"PBO:0042436"}


id: GO:0016595
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id: PR:P40847
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sap1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"switch-activating protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.02c","synonyms":[{"name":"Spom972h-sap1","type":"exact"}],"termid":"PR:P40847"}


id: GO:1904791
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id: PR:000030008
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id: GO:0007074
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id: GO:0016866
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id: FYPO:0002228
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id: PR:P87128
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 3 subunit J that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21681:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit J (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.13c","secondary_identifiers":["UniProtKB:P87128"],"synonyms":[{"name":"Spom972h-EIF3J","type":"exact"},{"name":"eIF-3 30 kDa (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF3j (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eukaryotic translation initiation factor 3 30 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87128"}


id: GO:1901843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of high voltage-gated calcium channel activity.","definition_xrefs":["GOC:TermGenie","GOC:rl","PMID:12754254","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of voltage-gated calcium channel activity","termid":"GO:1901387"},{"relation_name":"is_a","term_name":"regulation of high voltage-gated calcium channel activity","termid":"GO:1901841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of high voltage-gated calcium channel activity","synonyms":[{"name":"activation of high voltage gated calcium channel activity","type":"exact"},{"name":"activation of high voltage-dependent calcium channel activity","type":"exact"},{"name":"activation of high voltage-gated calcium channel activity","type":"narrow"},{"name":"positive regulation of high voltage gated calcium channel activity","type":"exact"},{"name":"positive regulation of high voltage-dependent calcium channel activity","type":"exact"},{"name":"up regulation of high voltage gated calcium channel activity","type":"exact"},{"name":"up regulation of high voltage-dependent calcium channel activity","type":"exact"},{"name":"up regulation of high voltage-gated calcium channel activity","type":"exact"},{"name":"up-regulation of high voltage gated calcium channel activity","type":"exact"},{"name":"up-regulation of high voltage-dependent calcium channel activity","type":"exact"},{"name":"up-regulation of high voltage-gated calcium channel activity","type":"exact"},{"name":"upregulation of high voltage gated calcium channel activity","type":"exact"},{"name":"upregulation of high voltage-dependent calcium channel activity","type":"exact"},{"name":"upregulation of high voltage-gated calcium channel activity","type":"exact"}],"termid":"GO:1901843"}


id: GO:0046405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerol = 3-hydroxypropanal + H2O.","definition_xrefs":["EC:4.2.1.30","PMID:18307109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"glycerol dehydratase activity","secondary_identifiers":["MetaCyc:GLYCEROL-DEHYDRATASE-RXN","RHEA:19765"],"synonyms":[{"name":"glycerol dehydrase activity","type":"related"},{"name":"glycerol hydro-lyase (3-hydroxypropanal-forming)","type":"related"},{"name":"glycerol hydro-lyase activity","type":"related"}],"termid":"GO:0046405"}


id: GO:0019398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of gallate, the anion of gallic acid, where the first step is the conversion of gallate to (1E)-4-oxobut-1-ene-1,2,4-tricarboxylate catalyzed by gallate dioxygenase.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic gallate catabolic process","termid":"GO:0042195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"gallate catabolic process via gallate dioxygenase activity","secondary_identifiers":["MetaCyc:GALLATE-DEGRADATION-II-PWY"],"synonyms":[{"name":"gallate breakdown via 4-carboxy-2-hydroxhexa-2,3-dienedioate","type":"exact"},{"name":"gallate catabolic process via 4-carboxy-2-hydroxhexa-2,3-dienedioate","type":"broad"},{"name":"gallate degradation via 4-carboxy-2-hydroxhexa-2,3-dienedioate","type":"exact"},{"name":"gallic acid catabolic process via 4-carboxy-2-hydroxhexa-2,3-dienedioate","type":"exact"},{"name":"gallic acid catabolism via 4-carboxy-2-hydroxhexa-2,3-dienedioate","type":"exact"}],"termid":"GO:0019398"}


id: MONDO:0858921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small cell sarcoma that is characterized by the absence of EWSR1 rearrangement and the presence of small round malignant cells with a small amount of cytoplasm.","definition_xrefs":["DOID:0081249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell sarcoma","termid":"MONDO:0006974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"EWSR1-negative small round cell tumor","secondary_identifiers":["MEDGEN:1714743","UMLS:C5237359","NCIT:C165671"],"termid":"MONDO:0858921","xrefs":{"Monarch":{"xref_id":"0858921"}}}


id: MONDO:0008157
data:
  {"annotated_genes":["SJAG_03449"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87168],"is_not":false,"summary":null,"term":"MONDO:0008157"}]},"cv_name":"mondo","definition":"Buschke-Ollendorff syndrome (BOS) is a benign disorder characterized by the association of osteopoikilosis lesions (``spotted bones'') in the skeleton and connective tissue nevi in the skin.","definition_xrefs":["Orphanet:1306"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"osteopetrosis","termid":"MONDO:0017198"},{"relation_name":"excluded_subClassOf","term_name":"obsolete dermis elastic tissue disorder (obsolete MONDO:0019292)","termid":"MONDO:0019292"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03449":null},"genotype_count":0,"is_obsolete":false,"name":"Buschke-Ollendorff syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0265514","GARD:1044","DOID:0111536","icd11.foundation:1556522143","OMIM:166700","MESH:C537415","MEDGEN:120545"],"synonyms":[{"name":"Bos","type":"related"},{"name":"Buschke Ollendorff syndrome","type":"related"},{"name":"Buschke-Ollendorff syndrome","type":"exact"},{"name":"Dermatoosteopoikilosis","type":"related"},{"name":"dermatofibrosis lenticularis disseminata with osteopoikilosis","type":"related"},{"name":"dermatofibrosis lenticularis disseminata, isolated","type":"related"},{"name":"dermatofibrosis, disseminated with osteopoikilosis","type":"related"},{"name":"dermatofibrosis, disseminated, with osteopoikilosis","type":"related"},{"name":"disseminated dermatofibrosis with osteopoikilosis","type":"exact"},{"name":"osteopathia condensans disseminata","type":"related"},{"name":"osteopoikilosis with melorheostosis","type":"related"},{"name":"osteopoikilosis with or without melorheostosis","type":"exact"},{"name":"osteopoikilosis, isolated","type":"related"}],"termid":"MONDO:0008157","terms_by_termid":{"MONDO:0008157":null},"xrefs":{"Monarch":{"xref_id":"0008157"}}}


id: PBO:0057126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 210","termid":"PBO:0057126"}


id: PBO:0067115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 159, pseudogene","termid":"PBO:0067115"}


id: GO:0075015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a symbiont structure that serves to infect its host organism. It includes physiological, developmental, and morphological changes of the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"symbiont entry into host","termid":"GO:0044409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of infection structure","synonyms":[{"name":"formation by symbiont of infection structure on or near host","type":"related"},{"name":"formation of host infection structure","type":"exact"},{"name":"formation of host penetration structure","type":"related"},{"name":"formation of infection structure on or near host","type":"related"}],"termid":"GO:0075015"}


id: PBO:0053103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope pseudogene 2","termid":"PBO:0053103"}


id: GO:0016037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reception of a photon by a cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"part_of","term_name":"detection of light stimulus","termid":"GO:0009583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"light absorption","synonyms":[{"name":"absorption of light","type":"exact"}],"termid":"GO:0016037"}


id: PBO:0043553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL4A2 antisense RNA 2","termid":"PBO:0043553"}


id: MONDO:1011522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemophilia A that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia A, non-human animal","termid":"MONDO:1011408"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemophilia A, domestic cat","secondary_identifiers":["OMIA:000437-9685"],"termid":"MONDO:1011522","xrefs":{"Monarch":{"xref_id":"1011522"}}}


id: PBO:0002233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair endonuclease (predicted)","termid":"PBO:0002233"}


id: PBO:0090233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-BAR domain protein Cdc15","termid":"PBO:0090233"}


id: PBO:0017636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc ion transmembrane transporter Zhf1","termid":"PBO:0017636"}


id: PBO:0027602
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_secondary_cell_septum_thickness","termid":"PBO:0027602"}


id: PBO:0110043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFB2M pseudogene 1","termid":"PBO:0110043"}


id: MONDO:0016936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chromosomal disorder characterized by the presence of extra copy/copies of part of chromosome 18.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"},{"relation_name":"is_a","term_name":"chromosome 18 disorder","termid":"MONDO:0700125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial trisomy/tetrasomy of chromosome 18","secondary_identifiers":["UMLS:C5816684","Orphanet:262682","GARD:20856","MEDGEN:1841544"],"synonyms":[{"name":"partial duplication/triplication of chromosome 18","type":"exact"},{"name":"partial trisomy/tetrasomy of chromosome type 18","type":"exact"}],"termid":"MONDO:0016936","xrefs":{"Monarch":{"xref_id":"0016936"}}}


id: MONDO:0018946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rhombencephalosynapsis (RS) is a rare malformation of the cerebellum characterized by the association of agenesis (total or partial) of the vermis and fusion of the cerebellar hemispheres.","definition_xrefs":["Orphanet:59315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"rhombencephalosynapsis","secondary_identifiers":["icd11.foundation:2112180041","ICD9:742.4","MEDGEN:356456","UMLS:C1866130","SCTID:442300000","GARD:18855"],"termid":"MONDO:0018946","xrefs":{"Monarch":{"xref_id":"0018946"}}}


id: PBO:0001860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar carboxypeptidase (predicted)","termid":"PBO:0001860"}


id: GO:0015418
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + quaternary ammonium(out) = ADP + H+ + phosphate + quaternary ammonium(in).","definition_xrefs":["GOC:pz","RHEA:11036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transmembrane transporter activity","termid":"GO:0015651"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type quaternary ammonium compound transporting activity","secondary_identifiers":["GO:0102908","EC:7.6.2.9","MetaCyc:RXN-8638"],"synonyms":[{"name":"ATP-dependent quaternary-ammonium compound transmembrane transporting activity","type":"related"},{"name":"ATPase-coupled quaternary ammonium compound transmembrane transporting activity","type":"related"},{"name":"glycine betaine/proline porter activity","type":"narrow"},{"name":"quarternary amine transporter activity","type":"broad"},{"name":"quaternary amine uptake transporter activity","type":"related"},{"name":"quaternary-amine-transporting ATPase activity","type":"related"},{"name":"quaternary-ammonium-compound ABC transporter","type":"exact"},{"name":"quaternary-ammonium-compound-transporting ATPase activity","type":"related"}],"termid":"GO:0015418"}


id: PBO:0071535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a","termid":"PBO:0071535"}


id: GO:0100051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates meiotic nuclear division.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of meiotic nuclear division by transcription from RNA polymerase II promoter (obsolete GO:0100051)","termid":"GO:0100051"}


id: GO:0160080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + indole(in) = ADP + phosphate + indole(out).","definition_xrefs":["PMID:37146609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type indole transporter activity","termid":"GO:0160080"}


id: PBO:0076767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 6","termid":"PBO:0076767"}


id: FYPO:0000943
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype characterized by normal spore morphology, i.e. the size, shape, and structure of the spore are indistinguishable from wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell morphology","termid":"FYPO:0000672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal spore morphology","termid":"FYPO:0000943"}


id: PBO:0085593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in bud-site selection; Bud14p-Glc7p complex is a cortical regulator of dynein; forms a complex with Kel1p and Kel2p that regulates Bnr1p (formin) to affect actin cable assembly, cytokinesis, and polarized growth; diploid mutants display a random budding pattern instead of the wild-type bipolar pattern; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0085593"}


id: PR:Q09764
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24H6.11c gene.","definition_xrefs":["UniProtKB:Q09764","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24H6.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.11c","synonyms":[{"name":"Spom972h-SPAC24H6.11c","type":"exact"}],"termid":"PR:Q09764"}


id: MONDO:0030964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal dominant 67","secondary_identifiers":["OMIM:619927","MEDGEN:1805690","UMLS:C5677006"],"synonyms":[{"name":"MRD67","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 67","type":"exact"},{"name":"mental retardation, autosomal dominant 67","type":"exact"}],"termid":"MONDO:0030964","xrefs":{"Monarch":{"xref_id":"0030964"}}}


id: MONDO:0002365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangiopericytoma arising from the kidney.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangiopericytoma","termid":"MONDO:0005094"},{"relation_name":"is_a","term_name":"kidney neoplasm","termid":"MONDO:0021163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"kidney hemangiopericytoma","secondary_identifiers":["MEDGEN:1847044","SCTID:254923001","NCIT:C4527","UMLS:C5848097","DOID:262"],"synonyms":[{"name":"hemangiopericytoma of kidney","type":"exact"},{"name":"hemangiopericytoma of the kidney","type":"exact"},{"name":"kidney hemangiopericytoma","type":"exact"},{"name":"kidney spindle cell tumor","type":"exact"},{"name":"kidney spindle cell tumour","type":"exact"},{"name":"renal hemangiopericytoma","type":"exact"}],"termid":"MONDO:0002365","xrefs":{"Monarch":{"xref_id":"0002365"}}}


id: GO:1901733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of quercetin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid catabolic process","termid":"GO:0046275"},{"relation_name":"is_a","term_name":"quercetin metabolic process","termid":"GO:1901732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"quercetin catabolic process","synonyms":[{"name":"quercetin breakdown","type":"exact"},{"name":"quercetin catabolism","type":"exact"},{"name":"quercetin degradation","type":"exact"}],"termid":"GO:1901733"}


id: MONDO:0003859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Meningiomas that affects both optic nerves.","definition_xrefs":["NCIT:C5304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optic nerve neoplasm","termid":"MONDO:0002640"},{"relation_name":"is_a","term_name":"optic tract meningioma","termid":"MONDO:0024648"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bilateral meningioma of optic nerve","secondary_identifiers":["MEDGEN:231442","UMLS:C1332551","DOID:6335"],"synonyms":[{"name":"bilateral meningioma of the optic nerve","type":"exact"},{"name":"bilateral optic nerve meningioma","type":"exact"}],"termid":"MONDO:0003859","xrefs":{"Monarch":{"xref_id":"0003859"}}}


id: PBO:0045002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death inducer-obliterator 1","termid":"PBO:0045002"}


id: PBO:0004349
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.4.15","termid":"PBO:0004349"}


id: MONDO:0020688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Reduced blood flow to the spinal cord which is supplied by the anterior spinal artery and the paired posterior spinal arteries. This condition may be associated with arteriosclerosis, trauma, emboli, diseases of the aorta, and other disorders. Prolonged ischemia may lead to infarction of spinal cord tissue.","definition_xrefs":["MESH:D020760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stroke disorder","termid":"MONDO:0005098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal cord ischemia","secondary_identifiers":["UMLS:C0752130","MEDGEN:155706","EFO:1001426"],"synonyms":[{"name":"cord Ischemias, spinal","type":"related"},{"name":"cord ischemia, spinal","type":"related"},{"name":"experimental spinal cord ischemia","type":"related"},{"name":"ischaemic myelopathies","type":"related"},{"name":"ischaemic myelopathy","type":"related"},{"name":"ischemia, spinal cord","type":"related"},{"name":"ischemias, spinal cord","type":"related"},{"name":"ischemic myelopathies","type":"related"},{"name":"ischemic myelopathy","type":"related"},{"name":"myelopathies, ischaemic","type":"related"},{"name":"myelopathies, ischemic","type":"related"},{"name":"myelopathy, ischaemic","type":"related"},{"name":"myelopathy, ischemic","type":"related"},{"name":"spinal cord Ischemias","type":"related"},{"name":"spinal cord ischemia, experimental","type":"related"}],"termid":"MONDO:0020688","xrefs":{"Monarch":{"xref_id":"0020688"}}}


id: GO:0002257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of the kinin cascade.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kinin cascade","termid":"GO:0002256"},{"relation_name":"is_a","term_name":"negative regulation of acute inflammatory response","termid":"GO:0002674"},{"relation_name":"is_a","term_name":"negative regulation of protein activation cascade","termid":"GO:2000258"},{"relation_name":"negatively_regulates","term_name":"kinin cascade","termid":"GO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"negative regulation of kinin cascade","synonyms":[{"name":"down regulation of kinin cascade","type":"exact"},{"name":"down-regulation of kinin cascade","type":"exact"},{"name":"downregulation of kinin cascade","type":"exact"},{"name":"inhibition of kinin cascade","type":"narrow"}],"termid":"GO:0002257"}


id: PBO:0028371
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_GT_repeat_stability","termid":"PBO:0028371"}


id: GO:1902124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (+)-pinoresinol.","definition_xrefs":["GOC:TermGenie","PMID:9872995","PMID:8910615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"(+)-pinoresinol metabolic process","synonyms":[{"name":"(+)-pinoresinol metabolism","type":"exact"}],"termid":"GO:1902124"}


id: GO:0010262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Initiation of a somatic embryo-an embryo arising from previously differentiated somatic cells, rather than from fused haploid gametes.","definition_xrefs":["GOC:sm","PMID:9611173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryo development ending in seed dormancy","termid":"GO:0009793"},{"relation_name":"is_a","term_name":"regeneration","termid":"GO:0031099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic embryogenesis","termid":"GO:0010262"}


id: PBO:0070247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 188 pseudogene","termid":"PBO:0070247"}


id: PBO:0031704
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_export","termid":"PBO:0031704"}


id: FYPO:0000961
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing sorbitol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002058","FYPO:0000139","FYPO:0002057","FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on sorbitol","synonyms":[{"name":"normal cell population growth in presence of sorbitol","type":"exact"},{"name":"normal cell population growth on glucitol","type":"exact"},{"name":"normal cell population growth on sorbitol","type":"exact"},{"name":"normal cellular response to sorbitol","type":"related"},{"name":"normal vegetative cell population growth on sorbitol","type":"exact"}],"termid":"FYPO:0000961"}


id: PBO:0033818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit 2-like Tca17 (predicted)","termid":"PBO:0033818"}


id: PBO:0082953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic pre-60S factor; required for the correct recycling of shuttling factors Alb1, Arx1 and Tif6 at the end of the ribosomal large subunit biogenesis; involved in bud growth in the mitotic signaling network","termid":"PBO:0082953"}


id: MONDO:0035759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"factor V atlanta bleeding disorder","secondary_identifiers":["GARD:22415","UMLS:C5681543","Orphanet:600194","MEDGEN:1842929"],"termid":"MONDO:0035759","xrefs":{"Monarch":{"xref_id":"0035759"}}}


id: PATO:0001527
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sound amplitude which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sound quality","termid":"PATO:0001519"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quiet","termid":"PATO:0001527"}


id: PBO:0047577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGFR1 oncogene partner 2","termid":"PBO:0047577"}


id: PBO:0089071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phospholipid scramblase","termid":"PBO:0089071"}


id: PATO:0001869
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being abnormal and having a destructive effect on living tissue.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal","termid":"PATO:0000460"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pathological","termid":"PATO:0001869"}


id: GO:1990047
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A proteinaceous, nuclear-derived structure that embeds the microtubule spindle apparatus from pole to pole in a microtubule-independent manner during mitosis.","definition_xrefs":["PMID:19273613","GOC:ans","PMID:22855526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spindle matrix","termid":"GO:1990047"}


id: PBO:0076691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 8","termid":"PBO:0076691"}


id: PBO:0028837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_homologous_chromosome_pairing","termid":"PBO:0028837"}


id: PBO:0060086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 33","termid":"PBO:0060086"}


id: MONDO:0005724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic, localized or disseminated infection by Cryptococcus neoformans. Sites of involvement include the lungs, central nervous system and meninges, skin, and visceral organs.--2004","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opportunistic mycosis","termid":"MONDO:0002312"},{"relation_name":"is_a","term_name":"parasitic infectious disease","termid":"MONDO:0005135"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptococcosis","secondary_identifiers":["MEDGEN:8189","icd11.foundation:390527954","DOID:12053","GARD:6218","ICD9:117.5","NCIT:C2967","Orphanet:1546","ICD10CM:B45","MedDRA:10011490","SCTID:42386007","UMLS:C0010414","NORD:1019","MESH:D003453","EFO:0007229"],"synonyms":[{"name":"Busse-Buschke's disease","type":"exact"},{"name":"Cryptococcal infection","type":"exact"},{"name":"Cryptococcus neoformans caused disease or disorder","type":"exact"},{"name":"Cryptococcus neoformans disease or disorder","type":"exact"},{"name":"Cryptococcus neoformans infectious disease","type":"exact"},{"name":"European cryptococcosis","type":"exact"},{"name":"cryptococcus neoformans infection","type":"related"},{"name":"torula","type":"exact"},{"name":"torulosis","type":"exact"}],"termid":"MONDO:0005724","xrefs":{"Monarch":{"xref_id":"0005724"}}}


id: PBO:0002531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CS domain","termid":"PBO:0002531"}


id: PBO:0001441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein Byr3","termid":"PBO:0001441"}


id: GO:0007108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process involved in starting cell separation.","definition_xrefs":["GOC:clt","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete cytokinesis, initiation of separation (obsolete GO:0007108)","synonyms":[{"name":"cytokinesis, initiation of separation","type":"exact"},{"name":"initiation of separation involved in cytokinesis","type":"exact"}],"termid":"GO:0007108"}


id: PBO:0065990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination activating 2","termid":"PBO:0065990"}


id: PBO:0033809
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_recombination_at_telomere_following_meiotic_cell_cycle","termid":"PBO:0033809"}


id: PBO:0089689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar dipeptidyl peptidase","termid":"PBO:0089689"}


id: GO:0009756
data:
  {"annotated_genes":["SJAG_00574","SJAG_04026","SJAG_01699","SJAG_00266","SJAG_02444","SJAG_01754","SJAG_02426","SJAG_00610","SJAG_00472","SJAG_03081","SJAG_04312","SJAG_01245","SJAG_02481","SJAG_04551","SJAG_00424","SJAG_02311","SJAG_01254"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103779,96112,110984,108802,108452,117535,107856,118569,111495],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"},{"annotations":[102362,109931,118385,93971,94632],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0110034"},{"annotations":[104777,91306,104074],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902660"}]},"cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of carbohydrate.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"cellular response to carbohydrate stimulus","termid":"GO:0071322"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00424":null,"SJAG_00472":null,"SJAG_00574":null,"SJAG_00610":null,"SJAG_01245":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02444":null,"SJAG_02481":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"carbohydrate mediated signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"carbohydrate mediated signalling","type":"exact"}],"termid":"GO:0009756","terms_by_termid":{"GO:0010619":null,"GO:0110034":null,"GO:1902660":null}}


id: MONDO:0032868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lessel-kubisch syndrome","secondary_identifiers":["OMIM:618681","UMLS:C5231460","MEDGEN:1684750"],"synonyms":[{"name":"LESSEL-KUBISCH SYNDROME","type":"related"},{"name":"LSKB","type":"related"}],"termid":"MONDO:0032868","xrefs":{"Monarch":{"xref_id":"0032868"}}}


id: PBO:0059509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded conserved sequence block II","termid":"PBO:0059509"}


id: PBO:0062500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily F member 1 pseudogene","termid":"PBO:0062500"}


id: PBO:0076442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 13 pseudogene 1","termid":"PBO:0076442"}


id: PBO:0068139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 446","termid":"PBO:0068139"}


id: FYPO:0004690
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 at the silent mating-type cassettes occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0000892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K9 acetylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"increased histone H3-K9 acetylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 acetylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 acetylation at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0004690"}


id: GO:0043647
data:
  {"annotated_genes":["SJAG_00244","SJAG_01970","SJAG_02321","SJAG_03409","SJAG_00321","SJAG_04870","SJAG_01702","SJAG_04067","SJAG_01148","SJAG_01154"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69315,108865,108866],"is_not":false,"summary":null,"term":"GO:0043647"},{"annotations":[107144,81048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071543"},{"annotations":[95262,76545,72982,58629,77283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032958"},{"annotations":[90576,117047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071545"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00321":null,"SJAG_01148":null,"SJAG_01154":null,"SJAG_01702":null,"SJAG_01970":null,"SJAG_02321":null,"SJAG_03409":null,"SJAG_04067":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"inositol phosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-1483249"],"synonyms":[{"name":"inositol phosphate metabolism","type":"exact"},{"name":"myo-inositol phosphate metabolic process","type":"narrow"},{"name":"myo-inositol phosphate metabolism","type":"narrow"}],"termid":"GO:0043647","terms_by_termid":{"GO:0032958":null,"GO:0043647":null,"GO:0071543":null,"GO:0071545":null}}


id: PBO:0057140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR219A2 host gene","termid":"PBO:0057140"}


id: GO:0018572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3,5-dichlorocatechol + O2 = 2 H+ + 2,4-dichloro-cis,cis-muconate.","definition_xrefs":["UM-BBD_reactionID:r0276"],"gene_count":0,"genotype_count":0,"name":"obsolete 3,5-dichlorocatechol 1,2-dioxygenase activity (obsolete GO:0018572)","termid":"GO:0018572"}


id: PBO:0066674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBPJ interacting and tubulin associated 1","termid":"PBO:0066674"}


id: MONDO:0008547
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thanatophoric dysplasia characterized by a cloverleaf-like skull and straight femurs.","direct_ancestors":[{"relation_name":"is_a","term_name":"thanatophoric dysplasia","termid":"MONDO:0017042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"thanatophoric dysplasia type 2","secondary_identifiers":["NCIT:C98584","MEDGEN:226975","ICD9:742.59","NANDO:1200876","MESH:C536508","OMIM:187601","UMLS:C1300257","GARD:1402","Orphanet:93274","SCTID:389158007"],"synonyms":[{"name":"TD2","type":"exact"},{"name":"cloverleaf skull with thanatophoric dwarfism","type":"related"},{"name":"cloverleaf skull-micromelic bone dysplasia syndrome","type":"exact"},{"name":"thanatophoric dwarfism - cloverleaf skull","type":"related"},{"name":"thanatophoric dwarfism type 2","type":"exact"},{"name":"thanatophoric dwarfism-cloverleaf skull syndrome","type":"exact"},{"name":"thanatophoric dysplasia type II","type":"related"},{"name":"thanatophoric dysplasia with Kleeblattschaedel","type":"related"},{"name":"thanatophoric dysplasia with straight femurs and cloverleaf skull","type":"related"},{"name":"thanatophoric dysplasia, type 2","type":"exact"},{"name":"thanatophoric dysplasia, type II","type":"related"},{"name":"type 2 thanatophoric dysplasia","type":"exact"}],"termid":"MONDO:0008547","xrefs":{"Monarch":{"xref_id":"0008547"}}}


id: PBO:0071042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 44","termid":"PBO:0071042"}


id: GO:1900374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in positive regulation of mating type switching.","definition_xrefs":["GOC:TermGenie","GOC:go_curators","PMID:8804308"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mating type switching by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900374)","synonyms":[{"name":"activation of mating type switching by regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"stimulation of mating type switching by regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of mating type switching by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of mating type switching by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of mating type switching by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900374"}


id: FYECO:0000318
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which compactin was added to the medium or assay buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ compactin","termid":"FYECO:0000318"}


id: MONDO:0013814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"podoconiosis, susceptibility to","secondary_identifiers":["UMLS:C3281245","OMIM:614590","MEDGEN:482875"],"synonyms":[{"name":"Nonfilarial elephantiasis of Lower legs, susceptibility to","type":"related"},{"name":"PDCOS","type":"exact"},{"name":"endemic Nonfilarial elephantiasis, susceptibility to","type":"related"},{"name":"lymphostatic verrucosis, susceptibility to","type":"related"},{"name":"podoconiosis, susceptibility to","type":"exact"}],"termid":"MONDO:0013814","xrefs":{"Monarch":{"xref_id":"0013814"}}}


id: PBO:0087760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of THO/TREX complexes; this complex couple transcription elongation with mitotic recombination and with mRNA metabolism and export, subunit of an RNA Pol II complex; regulates lifespan; involved in telomere maintenance; similar to Top1p","termid":"PBO:0087760"}


id: PBO:0075865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family pseudogene 5","termid":"PBO:0075865"}


id: GO:0099004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any signal transduction pathway involving calmodulin dependent kinase activity.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete calmodulin dependent kinase signaling pathway (obsolete GO:0099004)","synonyms":[{"name":"CAMK signaling pathway","type":"exact"}],"termid":"GO:0099004"}


id: PBO:0073863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC9A9 antisense RNA 2","termid":"PBO:0073863"}


id: GO:0000240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which follows pachytene during prophase I of meiosis, during which the homologous chromosomes begin to separate and the synaptonemal complex dissolves.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle phase","termid":"GO:0098764"},{"relation_name":"part_of","term_name":"meiotic prophase I","termid":"GO:0007128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007128"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007128","GO:0008150"],"is_obsolete":false,"name":"diplotene","secondary_identifiers":["Wikipedia:Diplotene","Wikipedia:Meiosis#Diplotene"],"termid":"GO:0000240"}


id: PBO:0045612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 23 (pseudogene)","termid":"PBO:0045612"}


id: GO:0001410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the chlamydospore over time, from its formation to the mature structure. A chlamydospores is a mitotic (asexual) one-celled spore, produced primarily for survival, not dispersal, originating endogenously and singly within part of a pre-existing cell and possessing an inner secondary and often thickened cell wall. An example of this is found in Candida albicans.","definition_xrefs":["GOC:mtg_sensu","ISBN:085199377X","PMID:14663094","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"},{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chlamydospore formation","secondary_identifiers":["GO:0055027"],"synonyms":[{"name":"chlamydospore development","type":"exact"}],"termid":"GO:0001410"}


id: MONDO:0009276
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bernard Soulier syndrome (BSS) is an inherited platelet disorder characterized by mild to severe bleeding tendency, macrothrombocytopenia and absent ristocetin-induced platelet agglutination.","definition_xrefs":["Orphanet:274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Bernard-Soulier syndrome","secondary_identifiers":["SCTID:234478007","MEDGEN:2212","UMLS:C0005129","NANDO:2200656","OMIM:231200","icd11.foundation:507309898","NCIT:C84595","MedDRA:10057473","GARD:2470","MESH:D001606","NORD:851","DOID:2217"],"synonyms":[{"name":"BSS","type":"related"},{"name":"Bernard - Soulier thrombopathy","type":"exact"},{"name":"Bernard Soulier syndrome","type":"exact"},{"name":"Bernard-Soulier syndrome","type":"exact"},{"name":"Bernard-Soulier syndrome, type A1","type":"related"},{"name":"Bernard-Soulier syndrome, type A1 (recessive)","type":"exact"},{"name":"Bernard-Soulier syndrome, type B","type":"related"},{"name":"Bernard-Soulier syndrome, type C","type":"related"},{"name":"Hemorrhagiparous thrombocytic dystrophy","type":"exact"},{"name":"Platelet glycoprotein 1b, deficiency of","type":"related"},{"name":"Platelet glycoprotein Ib deficiency","type":"related"},{"name":"Von Willebrand Factor receptor deficiency","type":"related"},{"name":"bleeding disorder, Platelet-type, 1","type":"related"},{"name":"deficiency of platelet glycoprotein 1b","type":"related"},{"name":"giant platelet disease","type":"related"},{"name":"giant platelet disorder, isolated","type":"exact"},{"name":"giant platelet syndrome","type":"exact"},{"name":"glycoprotein Ib, Platelet, deficiency of","type":"related"},{"name":"hemorrhagic dystrophic thrombocytopenia","type":"exact"},{"name":"macrothrombocytopenia, familial Bernard-Soulier type","type":"related"},{"name":"thrombopathy, Bernard-Soulier","type":"exact"}],"termid":"MONDO:0009276","xrefs":{"Monarch":{"xref_id":"0009276"}}}


id: PBO:0116706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BS member 1","termid":"PBO:0116706"}


id: MONDO:0045046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of thyroid hormone metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inherited thyroid metabolism disease","secondary_identifiers":["SCTID:36985004","UMLS:C0271824","ICD9:246.8","MEDGEN:543589"],"synonyms":[{"name":"inborn error of thyroid hormone metabolic process","type":"exact"},{"name":"inborn thyroid hormone metabolic process disorder","type":"exact"},{"name":"inherited disorder of thyroid metabolism","type":"exact"},{"name":"rare inborn error of thyroid hormone metabolic process","type":"exact"}],"termid":"MONDO:0045046","xrefs":{"Monarch":{"xref_id":"0045046"}}}


id: PBO:0055455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2887","termid":"PBO:0055455"}


id: GO:0015468
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Plasmid-encoded bacteriocins which are produced by enteric bacteria. Exert a lethal effect on other bacteria including E. coli strains that lack the Col plasmid. Bind to a cell surface receptor and are transported into the periplasm via an energy-dependent process involving a TonB- or TolA-dependent hetero-oligomeric protein complex. Some colicins kill their target cell by inserting into the cytoplasmic membrane where they form voltage-sensitive (trans-negative) channels that depolarize and deenergize the cell, and thereby kill it.","definition_xrefs":["TC:1.C.1.-.-"],"gene_count":0,"genotype_count":0,"name":"obsolete colicin (obsolete GO:0015468)","synonyms":[{"name":"colicin","type":"exact"}],"termid":"GO:0015468"}


id: FYPO:0007224
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly is decreased in centromere outer repeat regions. Heterochromatin assembly is the assembly of chromatin into a compact and highly condensed form that is often, but not always, transcriptionally silent.","definition_xrefs":["PMID:31822915","GO:0031507","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin assembly at centromere outer repeat during vegetative growth","termid":"FYPO:0003098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"decreased heterochromatin assembly at centromere outer repeat during vegetative growth","synonyms":[{"name":"decreased establishment of heterochromatin at centromere outer repeat","type":"exact"},{"name":"decreased heterochromatin assembly at centromere outer repeat at centromere otr during vegetative growth","type":"exact"},{"name":"decreased heterochromatin assembly at centromere outer repeat at centromeric outer repeat during vegetative growth","type":"exact"},{"name":"decreased heterochromatin assembly at centromere outer repeat at pericentric region during vegetative growth","type":"related"},{"name":"decreased heterochromatin assembly at centromere outer repeat at pericentromeric region during vegetative growth","type":"related"},{"name":"decreased heterochromatin assembly at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased heterochromatin formation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"reduced heterochromatin assembly at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0007224"}


id: FYPO:0004789
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which telomeres have fused, forming circular chromosomes, during G2 phase of the mitotic cell cycle.","definition_xrefs":["PMID:25533340","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circularized chromosome","termid":"FYPO:0002702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000002","FYPO:0000661","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000652","FYPO:0000654","FYPO:0000641"],"is_obsolete":false,"name":"circularized chromosome during mitotic G2 phase","synonyms":[{"name":"circular chromosomes during mitotic G2 phase","type":"exact"},{"name":"circularised chromosome during mitotic G2 phase","type":"exact"},{"name":"circularized chromosome during G2 during vegetative growth","type":"exact"},{"name":"fused telomeres during mitotic G2 phase","type":"related"},{"name":"telomere end fusion during mitotic G2 phase","type":"related"},{"name":"telomere fusion during mitotic G2 phase","type":"related"},{"name":"telomeres fused during mitotic G2 phase","type":"related"}],"termid":"FYPO:0004789"}


id: PBO:0016543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis-prenyltransferase","termid":"PBO:0016543"}


id: PBO:0005347
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein cleavage site","termid":"PBO:0005347"}


id: PBO:0080977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB11 antisense RNA 1","termid":"PBO:0080977"}


id: PBO:0047475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 2","termid":"PBO:0047475"}


id: GO:0015395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a nucleoside, from one side of a membrane to the other, down the concentration gradient.","definition_xrefs":["PMID:12446811","PMID:11749958","PMID:10353709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transmembrane transporter activity","termid":"GO:0005337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"nucleoside transmembrane transporter activity, down a concentration gradient","secondary_identifiers":["GO:0015396","GO:0015397"],"synonyms":[{"name":"equilibrative nucleoside transmembrane transporter, nitrobenzyl-thioinosine-insensitive activity","type":"narrow"},{"name":"equilibrative nucleoside transmembrane transporter, nitrobenzyl-thioinosine-sensitive activity","type":"narrow"},{"name":"equilibrative nucleoside transporter activity","type":"exact"}],"termid":"GO:0015395"}


id: GO:0002601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of polysaccharide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002580"},{"relation_name":"regulates","term_name":"antigen processing and presentation of polysaccharide antigen via MHC class II","termid":"GO:0002505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","synonyms":[{"name":"regulation of polysaccharide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002601"}


id: GO:0043060
data:
  {"annotated_genes":["SJAG_04076","SJAG_03926","SJAG_03217","SJAG_05220","SJAG_05319","SJAG_03220","SJAG_05019","SJAG_05266","SJAG_00794","SJAG_03327","SJAG_02814","SJAG_03683","SJAG_00918","SJAG_01775","SJAG_03698","SJAG_01224","SJAG_05295","SJAG_02346","SJAG_01805","SJAG_01837","SJAG_01211","SJAG_01371","SJAG_07002","SJAG_03437","SJAG_04259","SJAG_00418","SJAG_01278","SJAG_02731","SJAG_03989"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103266,115778,100533,109780,119072,95678,89669,92156,117541],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031619"},{"annotations":[118688],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904967"},{"annotations":[103270,102448,112337,107426,99819,116096,117929,91012,112293,97216,109784,118926,115222,111116,111869,100541,109466,97462,92856,91619,95695,104370,110859],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"A cell cycle process whereby homlogous chromosomes are positioned in a specific order and orientation at the metaphase plate (spindle equator) by the spindle machinery and centromere/kinetochore arrangement during meiosis I chromosome segregation. This alignment ensures that each daughter cell will receive the correct number of chromosomes during cell division.","definition_xrefs":["PMID:10809666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic metaphase chromosome alignment","termid":"GO:0051311"},{"relation_name":"part_of","term_name":"homologous chromosome segregation","termid":"GO:0045143"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00418":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01278":null,"SJAG_01371":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02346":null,"SJAG_02731":null,"SJAG_02814":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03683":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_04259":null,"SJAG_05019":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05295":null,"SJAG_05319":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"meiotic metaphase I homologous chromosome alignment","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiotic metaphase I chromosome alignment","type":"exact"}],"termid":"GO:0043060","terms_by_termid":{"GO:0031619":null,"GO:0051455":null,"GO:1904967":null}}


id: PBO:0031518
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_binding_phenotype","termid":"PBO:0031518"}


id: FYPO:0000192
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A regulation phenotype in which regulation of progression through S phase of the mitotic cell cycle is abnormal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abnormal regulation of S phase of mitotic cell cycle (obsolete FYPO:0000192)","termid":"FYPO:0000192"}


id: GO:0047771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-5-carboxymethylhydantoin + H2O = N-carbamoyl-L-aspartate + H+.","definition_xrefs":["EC:3.5.2.4","RHEA:12028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"carboxymethylhydantoinase activity","secondary_identifiers":["MetaCyc:CARBOXYMETHYLHYDANTOINASE-RXN","KEGG_REACTION:R02284"],"synonyms":[{"name":"L-5-carboxymethylhydantoin amidohydrolase activity","type":"related"},{"name":"hydantoin hydrolase activity","type":"related"}],"termid":"GO:0047771"}


id: GO:0004150
data:
  {"annotated_genes":["SJAG_00815"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70634],"is_not":false,"summary":null,"term":"GO:0004150"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-amino-4-hydroxy-6-(D-erythro-1,2,3-trihydroxypropyl)-7,8-dihydropteridine = 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine + glycolaldehyde.","definition_xrefs":["EC:4.1.2.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00815":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dihydroneopterin aldolase activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["RHEA:10540","MetaCyc:H2NEOPTERINALDOL-RXN"],"synonyms":[{"name":"2-amino-4-hydroxy-6-(D-erythro-1,2,3-trihydroxypropyl)-7,8-dihydropteridine glycolaldehyde-lyase (2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine-forming)","type":"related"},{"name":"2-amino-4-hydroxy-6-(D-erythro-1,2,3-trihydroxypropyl)-7,8-dihydropteridine glycolaldehyde-lyase activity","type":"related"}],"termid":"GO:0004150","terms_by_termid":{"GO:0004150":null}}


id: PBO:0086596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression induced in cells treated with mycotoxins patulin or citrinin; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086596"}


id: MONDO:0850284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic asthma that is triggered by an allergen and that is characterized by an immune system overreaction to a harmless substance, such as pollen or dust, with the subsequent release of immunoglobin E (IgE) antibodies.","definition_xrefs":["DOID:0080811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic asthma","termid":"MONDO:0850282"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extrinsic asthma","termid":"MONDO:0850284","xrefs":{"Monarch":{"xref_id":"0850284"}}}


id: PBO:0044447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 25, pseudogene","termid":"PBO:0044447"}


id: PBO:0053885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1165","termid":"PBO:0053885"}


id: PBO:0113198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiotic regulator; involved in maintaining sister chromatid cohesion during meiosis I as well as promoting proper attachment of kinetochores to the spindle during meiosis I and meiosis II; promotes phosphorylation of Cdc5p substrates in MI and impacts Hrr25p function in MII; substrate of the anaphase-promoting complex (APC) that is degraded during anaphase I; expressed solely in meiotic cells","termid":"PBO:0113198"}


id: MONDO:0007134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cooks syndrome is a malformation syndrome affecting the apical structures of digits and presenting with hypo/aplasia of nails and distal phalanges. More than half of digits are usually involved and the thumbs may appear digitalized.","definition_xrefs":["Orphanet:1487"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic nail anomaly (obsolete MONDO:0019285)","termid":"MONDO:0019285"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Cooks syndrome","secondary_identifiers":["GARD:4083","UMLS:C1862841","MEDGEN:354848","OMIM:106995","MESH:C537766","SCTID:720747002"],"synonyms":[{"name":"Cooks syndrome","type":"exact"},{"name":"ODP","type":"exact"},{"name":"anonychia and absence/hypoplasia of distal phalanges","type":"related"},{"name":"anonychia-onychodystrophy with hypoplasia or absence of distal phalanges","type":"related"},{"name":"anonychia-onychodystrophy with hypoplasia or absence of distal phalanges syndrome","type":"exact"}],"termid":"MONDO:0007134","xrefs":{"Monarch":{"xref_id":"0007134"}}}


id: PBO:0001674
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRACILE syndrome","termid":"PBO:0001674"}


id: GO:0046408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chlorophyllide a + phytyl diphosphate + 2 H+ = chlorophyll a + diphosphate.","definition_xrefs":["RHEA:17317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016765"],"is_obsolete":false,"name":"chlorophyll synthetase activity","secondary_identifiers":["KEGG_REACTION:R06284","MetaCyc:RXN1F-66","GO:0043787","EC:2.5.1.62"],"synonyms":[{"name":"chlorophyll synthase activity","type":"exact"},{"name":"chlorophyllide-a:phytyl-diphosphate phytyltransferase activity","type":"exact"}],"termid":"GO:0046408"}


id: MONDO:0005918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal placentation in which the placenta implants in the lower segment of the uterus (the zone of dilation) and may cover part or all of the opening of the cervix. It is often associated with serious antepartum bleeding and premature labor.","definition_xrefs":["MESH:D010923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"placenta disorder","termid":"MONDO:0005917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placenta praevia","secondary_identifiers":["MEDGEN:10782","NCIT:C26858","SCTID:36813001","EFO:0007442","DOID:11060","UMLS:C0032046"],"synonyms":[{"name":"placenta praevia","type":"exact"},{"name":"placenta previa","type":"exact"}],"termid":"MONDO:0005918","xrefs":{"Monarch":{"xref_id":"0005918"}}}


id: MONDO:1011636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"compulsive disorder, non-human animal","secondary_identifiers":["OMIA:001530"],"termid":"MONDO:1011636","xrefs":{"Monarch":{"xref_id":"1011636"}}}


id: GO:2000802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endocardial cushion to mesenchymal transition involved in heart valve formation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endocardial cushion to mesenchymal transition","termid":"GO:0140051"},{"relation_name":"is_a","term_name":"regulation of endocardial cushion to mesenchymal transition involved in heart valve formation","termid":"GO:2000800"},{"relation_name":"positively_regulates","term_name":"endocardial cushion to mesenchymal transition involved in heart valve formation","termid":"GO:0003199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endocardial cushion to mesenchymal transition involved in heart valve formation","synonyms":[{"name":"positive regulation of endocardial cushion to mesenchymal transition involved in valve formation","type":"exact"}],"termid":"GO:2000802"}


id: PBO:0076650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 5","termid":"PBO:0076650"}


id: MONDO:0004636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the lip.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oral cavity carcinoma in situ","termid":"MONDO:0000371"},{"relation_name":"is_a","term_name":"carcinoma of lip","termid":"MONDO:0021333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"lip carcinoma in situ","secondary_identifiers":["MEDGEN:83849","ICD9:230.0","SCTID:92643000","DOID:8661","NCIT:C4588","UMLS:C0347082"],"synonyms":[{"name":"carcinoma in situ of lip","type":"exact"},{"name":"carcinoma in situ of the Lip","type":"exact"},{"name":"lip in situ carcinoma","type":"exact"},{"name":"stage 0 Lip cancer","type":"exact"},{"name":"stage 0 Lip cancer aJCC v6","type":"exact"},{"name":"stage 0 Lip cancer aJCC v6 and v7","type":"exact"},{"name":"stage 0 Lip cancer aJCC v7","type":"exact"},{"name":"stage 0 cancer of Lip","type":"exact"},{"name":"stage 0 cancer of the Lip","type":"exact"},{"name":"stage 0 carcinoma of Lip","type":"exact"},{"name":"stage 0 carcinoma of the Lip","type":"exact"},{"name":"stage 0 lip carcinoma","type":"exact"}],"termid":"MONDO:0004636","xrefs":{"Monarch":{"xref_id":"0004636"}}}


id: SO:0002146
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 7th residue (a lysine), from the start of the H2AZ histone protein is acetylated.","definition_xrefs":["PMID:24316985","PMID:19385636","PMID:27087541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2AZ_acetylation_site","termid":"SO:0002144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2AZK7_acetylation_site","synonyms":[{"name":"H2A.ZK7ac","type":"exact"},{"name":"H2AZK7 acetylation site","type":"exact"},{"name":"H2AZK7ac","type":"exact"}],"termid":"SO:0002146"}


id: GO:0044847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a symbiont acquires iron from its host, either from heme or other iron containing molecules such as transferrin and lactoferrin. Begins with either the secretion of symbiont gene products that bind iron- or heme-containing molecules (siderophores and hemophores) from the symbiont cell into the host, or by expression of receptors that bind iron- or heme-containing molecules on the symbiont cell surface. Ends when the iron-containing compound is transported into the symbiont cell.","definition_xrefs":["PMID:22865843","PMID:15487950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquisition of nutrients from host","termid":"GO:0044002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"iron acquisition from host","secondary_identifiers":["GO:0052099"],"synonyms":[{"name":"acquisition by organism of nutrients from host via siderophores","type":"related"},{"name":"acquisition by symbiont of nutrients from host via siderophores","type":"narrow"},{"name":"heme acquisition","type":"related"},{"name":"iron acquisition","type":"broad"},{"name":"iron acquisition by symbiont from host","type":"exact"},{"name":"iron acquisition by symbiont from host heme","type":"narrow"}],"termid":"GO:0044847"}


id: PBO:0086898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter in the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; mutations in membrane-spanning domains permit cation and histidinol uptake","termid":"PBO:0086898"}


id: MONDO:0035529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic respiratory disease characterized by infantile onset of pulmonary alveolar proteinosis with hypogammaglobulinemia. Patients have normal respiratory function at birth, but subsequently develop recurrent, mainly viral, infections and progressive respiratory failure, often leading to death in infancy or early childhood. Additional reported features include leukocytosis and splenomegaly.","definition_xrefs":["Orphanet:572428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infantile-onset pulmonary alveolar proteinosis-hypogammaglobulinemia","secondary_identifiers":["MEDGEN:1810375","UMLS:C5680364","GARD:22313"],"synonyms":[{"name":"OAS1 deficiency","type":"exact"},{"name":"OAS1-related infantile-onset pulmonary alveolar proteinosis-hypogammaglobulinemia","type":"exact"}],"termid":"MONDO:0035529","xrefs":{"Monarch":{"xref_id":"0035529"}}}


id: MONDO:0016243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemoglobin E disease (HbE) is a hemoglobinopathy characterized by production of abnormal variant hemoglobin known as hemoglobin E, with a generally benign, asymptomatic presentation.","definition_xrefs":["Orphanet:2133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"},{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"hemoglobin E disease","secondary_identifiers":["NCIT:C35287","SCTID:25065001","ICD9:282.7","GARD:2641","MEDGEN:68658","DOID:5379","icd11.foundation:1898135714","MedDRA:10053215","UMLS:C0238159"],"synonyms":[{"name":"Hb-E disease","type":"exact"},{"name":"hemoglobin E disease","type":"exact"}],"termid":"MONDO:0016243","xrefs":{"Monarch":{"xref_id":"0016243"}}}


id: MONDO:0000759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acrorenal syndrome (obsolete MONDO:0000759)","termid":"MONDO:0000759","xrefs":{"Monarch":{"xref_id":"0000759"}}}


id: PBO:0033833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic fizzy-related APC coactivator Fzr3","termid":"PBO:0033833"}


id: GO:0000186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The initiation of the activity of the inactive enzyme MAP kinase kinase (MAPKK).","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKK activity (obsolete GO:0000186)","synonyms":[{"name":"activation of MAP kinase kinase activity","type":"exact"},{"name":"activation of MAP/ERK kinase kinase","type":"exact"},{"name":"activation of MAP2K activity","type":"exact"},{"name":"activation of MAPKK activity during sporulation","type":"narrow"},{"name":"positive regulation of MAPKK activity","type":"broad"}],"termid":"GO:0000186"}


id: PBO:0030658
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_Man9GlcNAc_level","termid":"PBO:0030658"}


id: PBO:0090620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Emc6","termid":"PBO:0090620"}


id: GO:0001869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of complement activation by the lectin pathway.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of complement activation, lectin pathway","termid":"GO:0001868"},{"relation_name":"is_a","term_name":"negative regulation of innate immune response","termid":"GO:0045824"},{"relation_name":"is_a","term_name":"negative regulation of complement activation","termid":"GO:0045916"},{"relation_name":"negatively_regulates","term_name":"complement activation, lectin pathway","termid":"GO:0001867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of complement activation, lectin pathway","synonyms":[{"name":"down regulation of complement activation, lectin pathway","type":"exact"},{"name":"down-regulation of complement activation, lectin pathway","type":"exact"},{"name":"downregulation of complement activation, lectin pathway","type":"exact"},{"name":"inhibition of complement activation, lectin pathway","type":"narrow"},{"name":"negative regulation of complement cascade, lectin pathway","type":"exact"}],"termid":"GO:0001869"}


id: PBO:0120017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXADR cell adhesion molecule","termid":"PBO:0120017"}


id: PBO:0074387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG8 nonsense mediated mRNA decay factor","termid":"PBO:0074387"}


id: PBO:0081172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 9 pseudogene 2","termid":"PBO:0081172"}


id: PBO:0108694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RanGAP Rna1","termid":"PBO:0108694"}


id: MONDO:0011387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"psoriasis, susceptibility to","termid":"MONDO:0100171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis 4, susceptibility to","secondary_identifiers":["DOID:0111280","MEDGEN:347765","UMLS:C1858958","OMIM:603935"],"synonyms":[{"name":"PSORS4","type":"exact"},{"name":"psoriasis 4, susceptibility to","type":"exact"},{"name":"psoriasis susceptibility 4","type":"exact"}],"termid":"MONDO:0011387","xrefs":{"Monarch":{"xref_id":"0011387"}}}


id: PBO:0063125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase family member 10","termid":"PBO:0063125"}


id: GO:0038011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which internalization of a signaling receptor stops, prevents, or reduces the frequency, rate or extent of signal transduction. Receptor internalization can attenuate or reduce the strength of signaling by reducing the concentration of cell surface receptors available to ligands.","definition_xrefs":["PMID:19696798","GOC:signaling","GOC:bf","PMID:17908284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of signal transduction by receptor internalization","termid":"GO:0038009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0016192","GO:0023052"],"is_obsolete":false,"name":"negative regulation of signal transduction by receptor internalization","synonyms":[{"name":"negative regulation of signaling pathway by receptor endocytosis","type":"exact"}],"termid":"GO:0038011"}


id: MONDO:0013879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary fibrosis and/or bone marrow failure, telomere-related","termid":"MONDO:0000148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, 2","secondary_identifiers":["UMLS:C3553622","MEDGEN:766536","OMIM:614743"],"synonyms":[{"name":"PFBMFT2","type":"related"},{"name":"aplastic anaemia","type":"broad"},{"name":"aplastic anemia","type":"broad"},{"name":"pulmonary fibrosis and/or bone marrow failure, TELOMERE-RELATED, 2","type":"related"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, 2","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, type 2","type":"exact"},{"name":"pulmonary fibrosis, idiopathic, susceptibility to","type":"related"}],"termid":"MONDO:0013879","xrefs":{"Monarch":{"xref_id":"0013879"}}}


id: GO:0140965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process leading to the generation of a functional secondary piRNA, involving a self-perpetuating piRNA loop, often called the ping-pong cycle, in which piRNAs are amplified by pairing with complementary transcripts (for example the transposable element mRNA target). In Drosophila, the processing involves the piwi proteins aubergine and Argonaute 3 and in mice, the piwi proteins Piwil2 and Piwil4.","definition_xrefs":["PMID:29281264","PMID:32895365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piRNA processing","termid":"GO:0034587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"secondary piRNA processing","synonyms":[{"name":"ping-pong amplification","type":"related"},{"name":"ping-pong derived piRNA","type":"exact"},{"name":"secondary PIWI-associated RNA processing","type":"exact"},{"name":"secondary piRNA biogenesis","type":"exact"}],"termid":"GO:0140965"}


id: FYPO:0003497
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of azetidine-2-carboxylic acid acetyltransferase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal azetidine-2-carboxylic acid acetyltransferase activity","termid":"FYPO:0003495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"increased azetidine-2-carboxylic acid acetyltransferase activity","termid":"FYPO:0003497"}


id: MONDO:0020999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic chronic primary adrenal insufficiency (obsolete MONDO:0020999)","secondary_identifiers":["Orphanet:101960"],"termid":"MONDO:0020999","xrefs":{"Monarch":{"xref_id":"0020999"}}}


id: MONDO:0005728
data:
  {"annotated_genes":["SJAG_03786","SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859571"},{"annotations":[88625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010606"}]},"cv_name":"mondo","definition":"A disease involving the diaphragm.","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"skeletal muscle disorder","termid":"MONDO:0020120"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_03786":null},"genotype_count":0,"is_obsolete":false,"name":"diaphragm disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:519.4","UMLS:C0152097","EFO:0007233","MEDGEN:508886","DOID:10481","SCTID:48475001"],"synonyms":[{"name":"diaphragm disease","type":"exact"},{"name":"diaphragm disease or disorder","type":"exact"},{"name":"diaphragmatic disease","type":"related"},{"name":"diaphragmatic disorder","type":"related"},{"name":"disease of diaphragm","type":"exact"},{"name":"disease or disorder of diaphragm","type":"exact"},{"name":"disorder of diaphragm","type":"exact"}],"termid":"MONDO:0005728","terms_by_termid":{"MONDO:0010606":null,"MONDO:0859571":null},"xrefs":{"Monarch":{"xref_id":"0005728"}}}


id: MONDO:0030706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An cystitis caused by infection with Trichomonas vaginalis.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Trichomonas vaginitis urogenital infection","termid":"MONDO:0005993"},{"relation_name":"is_a","term_name":"cystitis","termid":"MONDO:0006032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trichomonas cystitis","secondary_identifiers":["NCIT:C35405","ICD9:131.09","SCTID:197850006","MEDGEN:87425","UMLS:C0341733"],"synonyms":[{"name":"Trichomonas cystitis","type":"exact"},{"name":"Trichomonas vaginalis caused cystitis","type":"exact"},{"name":"Trichomonas vaginalis cystitis","type":"exact"},{"name":"cystitis in trichomoniasis","type":"related"},{"name":"trichomonal cystitis","type":"exact"}],"termid":"MONDO:0030706","xrefs":{"Monarch":{"xref_id":"0030706"}}}


id: PBO:0061705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar and spindle associated protein 1","termid":"PBO:0061705"}


id: GO:1905006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epithelial to mesenchymal transition involved in endocardial cushion formation.","definition_xrefs":["GOC:rl","GOC:TermGenie","GOC:BHF","PMID:18718461","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062044"},{"relation_name":"is_a","term_name":"regulation of epithelial to mesenchymal transition involved in endocardial cushion formation","termid":"GO:1905005"},{"relation_name":"negatively_regulates","term_name":"epithelial to mesenchymal transition involved in endocardial cushion formation","termid":"GO:0003198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial to mesenchymal transition involved in endocardial cushion formation","synonyms":[{"name":"down regulation of epithelial to mesenchymal transition involved in endocardial cushion formation","type":"exact"},{"name":"down-regulation of epithelial to mesenchymal transition involved in endocardial cushion formation","type":"exact"},{"name":"downregulation of epithelial to mesenchymal transition involved in endocardial cushion formation","type":"exact"},{"name":"inhibition of epithelial to mesenchymal transition involved in endocardial cushion formation","type":"narrow"}],"termid":"GO:1905006"}


