# terms

id: MONDO:0006425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spinal chordoma (obsolete MONDO:0006425)","termid":"MONDO:0006425","xrefs":{"Monarch":{"xref_id":"0006425"}}}


id: PR:O59774
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- yps1 gene.","definition_xrefs":["UniProtKB:O59774","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic proteinase yapsin-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.09","synonyms":[{"name":"Spom972h-yps1","type":"exact"}],"termid":"PR:O59774"}


id: PBO:0077021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioesterase superfamily member 4","termid":"PBO:0077021"}


id: MONDO:0957459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"congenital esophageal stenosis","secondary_identifiers":["UMLS:C1963580","MEDGEN:743886","Orphanet:645749"],"termid":"MONDO:0957459","xrefs":{"Monarch":{"xref_id":"0957459"}}}


id: PBO:0063747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 12","termid":"PBO:0063747"}


id: MONDO:0012993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dyschromatosis universalis hereditaria","termid":"MONDO:0000736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dyschromatosis universalis hereditaria 2","secondary_identifiers":["MESH:C567194","UMLS:C2675183","GARD:15581","OMIM:612715","MEDGEN:382542"],"synonyms":[{"name":"DUH2","type":"related"},{"name":"dyschromatosis universalis hereditaria 2","type":"exact"}],"termid":"MONDO:0012993","xrefs":{"Monarch":{"xref_id":"0012993"}}}


id: FYPO:0006978
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of coenzyme Q10 measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular coenzyme Q10 level","synonyms":[{"name":"decreased cellular UQ10 level","type":"exact"},{"name":"decreased cellular coenzyme Q10 level during mitotic cell cycle","type":"related"},{"name":"decreased cellular coenzyme Q10 level during vegetative growth","type":"exact"},{"name":"decreased cellular ubiquinone 10 level","type":"exact"},{"name":"reduced cellular coenzyme Q10 level","type":"exact"}],"termid":"FYPO:0006978"}


id: MONDO:1012443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant melanoma, non-human animal","termid":"MONDO:1011821"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant melanoma, lion","secondary_identifiers":["OMIA:001724-9689"],"termid":"MONDO:1012443","xrefs":{"Monarch":{"xref_id":"1012443"}}}


id: GO:0032869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to insulin","termid":"GO:0032868"},{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to insulin stimulus","termid":"GO:0032869"}


id: PBO:0058916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12135","termid":"PBO:0058916"}


id: PBO:0028821
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation_resulting_in_formation_of_ascus_with_fewer_than_four_spores","termid":"PBO:0028821"}


id: PBO:0034586
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_cell_tip_during_mitosis","termid":"PBO:0034586"}


id: MONDO:0800206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa dystrophica","termid":"MONDO:0006543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa dystrophica with subcorneal cleavage","secondary_identifiers":["UMLS:C2675683","MEDGEN:436495"],"synonyms":[{"name":"EBDSC","type":"exact"}],"termid":"MONDO:0800206","xrefs":{"Monarch":{"xref_id":"0800206"}}}


id: FYPO:0008312
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid cohesion is increased at the centromeres in early mitosis. Contromeric cohesion is usually protected until  the metaphase anaphase transition.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid cohesion","termid":"FYPO:0006521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000641"],"is_obsolete":false,"name":"increased split sister centromeres in early mitosis","synonyms":[{"name":"increased sister kinetochore dissociation at centromeres","type":"exact"},{"name":"increased split sister centromeres in mitosis","type":"broad"}],"termid":"FYPO:0008312"}


id: FYPO:0005956
data:
  {"alleles_by_uniquename":{"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005957"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dephosphorylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal protein dephosphorylation","termid":"FYPO:0004426"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03940":null},"genotype_count":1,"genotypes_by_uniquename":{"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"abnormal protein dephosphorylation during vegetative growth","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_03940"],"single_locus_genotype_uniquenames":["nem2delta"],"synonyms":[{"name":"abnormal protein dephosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005956","terms_by_termid":{"FYPO:0005957":null,"FYPO_EXT:0000001":null}}


id: MONDO:1012722
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any rod-cone dysplasia that occurs in dogs due to an 8-bp insertion in exon 21 in the PDE6B gene.","definition_xrefs":["OMIA:001669-9615","PMID:11124530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rod-cone dysplasia 1, PDE6B-related, dog","termid":"MONDO:1012630"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rod-cone dysplasia 1a, PDE6B-related, dog","synonyms":[{"name":"retinal atrophy-rod-cone dysplasia 1a, dog","type":"related"}],"termid":"MONDO:1012722","xrefs":{"Monarch":{"xref_id":"1012722"}}}


id: GO:0050565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + N2-citryl-N6-acetyl-N6-hydroxy-L-lysine + N6-acetyl-N6-hydroxy-L-lysine = aerobactin + AMP + diphosphate + H+.","definition_xrefs":["RHEA:32167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"aerobactin synthase activity","synonyms":[{"name":"citrate:6-N-acetyl-6-N-hydroxy-L-lysine ligase (ADP-forming)","type":"exact"},{"name":"citrate:N6-acetyl-N6-hydroxy-L-lysine ligase (ADP-forming)","type":"exact"}],"termid":"GO:0050565"}


id: GO:2000157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of ubiquitin-specific protease (deubiquitinase) activity.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of ubiquitin-specific protease activity (obsolete GO:2000157)","synonyms":[{"name":"negative regulation of UBP","type":"related"},{"name":"negative regulation of UCH2","type":"related"},{"name":"negative regulation of deubiquitinase activity","type":"exact"},{"name":"negative regulation of ubiquitin hydrolase activity","type":"exact"}],"termid":"GO:2000157"}


id: PBO:0038380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_chemical_role","termid":"PBO:0038380"}


id: GO:0003335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the corneocyte over time, from its formation to the mature structure. A corneocyte is the last stage of development of a keratinocyte where the keratinocyte flattens, loses its nucleus and eventually delaminates from the epidermis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"keratinocyte development","termid":"GO:0003334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corneocyte development","termid":"GO:0003335"}


id: GO:0017062
data:
  {"annotated_genes":["SJAG_05305","SJAG_04560","SJAG_03099","SJAG_01141","SJAG_01405"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78609,80069,109554,114844,60939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034551"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the cytochrome bc(1) complex, a transmembrane lipoprotein complex that it catalyzes the reduction of cytochrome c by accepting reducing equivalents from Coenzyme Q, by the aggregation, arrangement and bonding together of its constituents.","definition_xrefs":["GOC:jl","PMID:12833641","PMID:20116362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome complex assembly","termid":"GO:0017004"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01141":null,"SJAG_01405":null,"SJAG_03099":null,"SJAG_04560":null,"SJAG_05305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"respiratory chain complex III assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"coenzyme Q and cytochrome c reductase complex assembly","type":"exact"},{"name":"coenzyme Q and cytochrome c reductase complex biogenesis","type":"exact"},{"name":"complex III assembly","type":"exact"},{"name":"complex III biogenesis","type":"exact"},{"name":"cytochrome bc(1) complex assembly","type":"exact"},{"name":"cytochrome bc(1) complex biogenesis","type":"exact"}],"termid":"GO:0017062","terms_by_termid":{"GO:0034551":null}}


id: MONDO:1011788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerative myopathy of obturator-externus, non-human animal","secondary_identifiers":["OMIA:000265"],"termid":"MONDO:1011788","xrefs":{"Monarch":{"xref_id":"1011788"}}}


id: PBO:0055764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA TGF-beta/SMAD3 pathway interacting","termid":"PBO:0055764"}


id: PBO:0083117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication initiation protein; loads DNA pol epsilon onto pre-replication complexes at origins; checkpoint sensor recruited to stalled replication forks by the checkpoint clamp complex where it activates Mec1p; along with Rfa1p, binds to ultrafine anaphase bridges in mitotic cells and prevents accumulation of chromatin bridges by stimulating the Mec1p kinase and suppressing homologous recombination; ortholog of human TopBP1; forms nuclear foci upon DNA replication stress","termid":"PBO:0083117"}


id: PR:P36580
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fructose-bisphosphate aldolase class 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02957","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-bisphosphate aldolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.07","secondary_identifiers":["UniProtKB:P36580"],"synonyms":[{"name":"FBP aldolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FBPA (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fbaA","type":"exact"},{"name":"fructose-1,6-bisphosphate aldolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36580"}


id: PBO:0091702
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YKR002W","termid":"PBO:0091702"}


id: PBO:0070202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 127 pseudogene","termid":"PBO:0070202"}


id: PBO:0082564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chaperone protein; required for the assembly of box H/ACA snoRNPs and thus for pre-rRNA processing; functions as an RNA mimic; forms a complex with Naf1p and interacts with H/ACA snoRNP components Nhp2p and Cbf5p; homology with known Hsp90p cochaperones; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082564"}


id: GO:0099617
data:
  {"annotated_genes":["SJAG_00915","SJAG_02564","SJAG_00438","SJAG_00836","SJAG_00133","SJAG_MIT15","SJAG_05204","SJAG_MIT09","SJAG_02105","SJAG_00852","SJAG_00077","SJAG_01249","SJAG_00797","SJAG_03282","SJAG_MIT37","SJAG_02598","SJAG_07003","SJAG_00985","SJAG_03114","SJAG_04122","SJAG_03925","SJAG_00542","SJAG_01806"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90996,91363,91825,94732,95159,95698,95750,96741,98155,103747,104967,105582,105608,106958,109766,109858,110756,117846,121092,121098,121103],"is_not":false,"summary":null,"term":"GO:0099617"},{"annotations":[105693,102377],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099616"}]},"cv_name":"cellular_component","definition":"The side (leaflet) of the mitochondrial inner membrane that faces the matrix.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumenal side of membrane","termid":"GO:0098576"},{"relation_name":"part_of","term_name":"mitochondrial inner membrane","termid":"GO:0005743"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00077":null,"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00797":null,"SJAG_00836":null,"SJAG_00852":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01249":null,"SJAG_01806":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_03282":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005739","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"matrix side of mitochondrial inner membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099617","terms_by_termid":{"GO:0099616":null,"GO:0099617":null}}


id: MONDO:0002807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tumors or cancer of the bronchi.","definition_xrefs":["MESH:D001984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchial disorder","termid":"MONDO:0001358"},{"relation_name":"is_a","term_name":"respiratory tract neoplasm","termid":"MONDO:0020641"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchial neoplasm","secondary_identifiers":["DOID:3906","HP:0030077","MEDGEN:2735","EFO:1000849","SCTID:126705004","UMLS:C0006264","NANDO:2200081"],"synonyms":[{"name":"bronchial neoplasm","type":"exact"},{"name":"bronchial neoplasm (disease)","type":"exact"},{"name":"bronchus neoplasm","type":"exact"},{"name":"bronchus neoplasm (disease)","type":"exact"},{"name":"bronchus tumor","type":"exact"},{"name":"bronchus tumour","type":"exact"},{"name":"neoplasm of bronchus","type":"exact"},{"name":"tumor of bronchus","type":"exact"},{"name":"tumour of bronchus","type":"exact"}],"termid":"MONDO:0002807","xrefs":{"Monarch":{"xref_id":"0002807"}}}


id: PBO:0017778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex TPR lobe subcomplex subunit Apc3","termid":"PBO:0017778"}


id: GO:0046385
data:
  {"annotated_genes":["SJAG_04627","SJAG_04657","SJAG_04665","SJAG_03771","SJAG_02948","SJAG_00885","SJAG_04487","SJAG_02874"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009265"},{"annotations":[94319,97390,109213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[72795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[71664,81253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[94320,70219,72796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[72794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[71663,81276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of deoxyribose phosphate, the phosphorylated sugar 2-deoxy-erythro-pentose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribose phosphate metabolic process","termid":"GO:0019692"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_02948":null,"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deoxyribose phosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribose phosphate anabolism","type":"exact"},{"name":"deoxyribose phosphate biosynthesis","type":"exact"},{"name":"deoxyribose phosphate formation","type":"exact"},{"name":"deoxyribose phosphate synthesis","type":"exact"}],"termid":"GO:0046385","terms_by_termid":{"GO:0006226":null,"GO:0006227":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null,"GO:0009265":null}}


id: MONDO:0013944
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89088],"is_not":false,"summary":null,"term":"MONDO:0013944"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"is_obsolete":false,"name":"autoinflammation-PLCG2-associated antibody deficiency-immune dysregulation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200451","Orphanet:324530","UMLS:C3553961","GARD:17486","MEDGEN:766875","OMIM:614878","NANDO:2200442"],"synonyms":[{"name":"APLAID","type":"exact"},{"name":"AUTOINFLAMMATION, antibody deficiency, and immune dysregulation, PLCG2-associated","type":"related"},{"name":"autoinflammation, antibody deficiency, and immune dysregulation syndrome","type":"exact"}],"termid":"MONDO:0013944","terms_by_termid":{"MONDO:0013944":null},"xrefs":{"Monarch":{"xref_id":"0013944"}}}


id: GO:0005311
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (dicarboxylate or tricarboxylate)(out) + Na+(out) = (dicarboxylate or tricarboxylate)(in) + Na+(in).","definition_xrefs":["TC:2.A.47.1.5"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium:dicarboxylate/tricarboxylate symporter activity (obsolete GO:0005311)","synonyms":[{"name":"sodium:dicarboxylate/tricarboxylate cotransporter activity","type":"broad"},{"name":"sodium:dicarboxylate/tricarboxylate symporter activity","type":"exact"}],"termid":"GO:0005311"}


id: SO:0000378
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DsrA RNA regulates both transcription, by overcoming transcriptional silencing by the nucleoid-associated H-NS protein, and translation, by promoting efficient translation of the stress sigma factor, RpoS. These two activities of DsrA can be separated by mutation: the first of three stem-loops of the 85 nucleotide RNA is necessary for RpoS translation but not for anti-H-NS action, while the second stem-loop is essential for antisilencing and less critical for RpoS translation. The third stem-loop, which behaves as a transcription terminator, can be substituted by the trp transcription terminator without loss of either DsrA function. The sequence of the first stem-loop of DsrA is complementary with the upstream leader portion of RpoS messenger RNA, suggesting that pairing of DsrA with the RpoS message might be important for translational regulation.","direct_ancestors":[{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DsrA_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/DsrA_RNA"],"synonyms":[{"name":"DsrA RNA","type":"exact"}],"termid":"SO:0000378"}


id: MONDO:0011578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial papillary thyroid carcinoma with renal papillary neoplasia (fPTC/PRN) is an extremely rare inherited tumor syndrome within the familial nonmedullary thyroid cancer group (fNMTC).","definition_xrefs":["Orphanet:97290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial nonmedullary thyroid carcinoma","termid":"MONDO:0017896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"familial papillary thyroid carcinoma with renal papillary neoplasia","secondary_identifiers":["SCTID:717734005","GARD:16853","MESH:C565310","OMIM:605642","UMLS:C1854104","MEDGEN:381339"],"synonyms":[{"name":"PTC-RCC","type":"exact"},{"name":"Prn1","type":"related"},{"name":"Ptcprn","type":"related"},{"name":"ptc-RCC","type":"exact"},{"name":"thyroid carcinoma, papillary, with papillary renal neoplasia","type":"related"}],"termid":"MONDO:0011578","xrefs":{"Monarch":{"xref_id":"0011578"}}}


id: PBO:0062337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 76","termid":"PBO:0062337"}


id: MONDO:0014876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the TNIK gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 54","secondary_identifiers":["DOID:0081216","MEDGEN:934722","OMIM:617028","GARD:22573","UMLS:C4310755"],"synonyms":[{"name":"MRT54","type":"exact"},{"name":"TNIK autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in TNIK","type":"exact"},{"name":"intellectual developmental disorder 54","type":"exact"},{"name":"intellectual disability, autosomal recessive 54","type":"exact"},{"name":"intellectual disability, autosomal recessive type 54","type":"exact"},{"name":"mental retardation, autosomal recessive 54","type":"exact"},{"name":"mental retardation, autosomal recessive type 54","type":"exact"}],"termid":"MONDO:0014876","xrefs":{"Monarch":{"xref_id":"0014876"}}}


id: MONDO:0002181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-neoplastic overgrowth of bone.","definition_xrefs":["NCIT:C3029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperostosis","termid":"MONDO:0002185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exostosis","secondary_identifiers":["SCTID:416189003","UMLS:C1442903","DOID:203","SCTID:235231000119100","ICD9:726.91","MEDGEN:257035"],"synonyms":[{"name":"bone osteophyte","type":"exact"},{"name":"bone spur","type":"exact"},{"name":"bony outgrowth","type":"exact"},{"name":"exostosis","type":"exact"},{"name":"orbital exostosis","type":"narrow"},{"name":"osteophyte","type":"exact"},{"name":"swimmer's exostosis","type":"narrow"}],"termid":"MONDO:0002181","xrefs":{"Monarch":{"xref_id":"0002181"}}}


id: PR:O74398
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prickle-like protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain-containing protein C4F6.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.12","secondary_identifiers":["UniProtKB:O74398"],"synonyms":[{"name":"Spom972h-PRICKLE4","type":"exact"}],"termid":"PR:O74398"}


id: PR:Q9P7L8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sap62 gene.","definition_xrefs":["UniProtKB:Q9P7L8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor sap62 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.05","synonyms":[{"name":"Spom972h-sap62","type":"exact"},{"name":"spliceosome-associated protein 62 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7L8"}


id: SO:0001022
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The point within a chromosome where an inversion begins or ends.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_breakpoint","termid":"SO:0001021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_breakpoint","synonyms":[{"name":"inversion breakpoint","type":"exact"}],"termid":"SO:0001022"}


id: GO:0022889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of serine from one side of a membrane to the other. Serine is 2-amino-3-hydroxypropanoic acid.","definition_xrefs":["RHEA:35031","ISBN:0815340729","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete serine transmembrane transporter activity (obsolete GO:0022889)","termid":"GO:0022889"}


id: PBO:0063722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PGR antisense RNA 1","termid":"PBO:0063722"}


id: PBO:0071751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L41 pseudogene 7","termid":"PBO:0071751"}


id: GO:0060697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of phospholipid catabolism, the chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid catabolic process","termid":"GO:0050996"},{"relation_name":"is_a","term_name":"regulation of phospholipid catabolic process","termid":"GO:0060696"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid metabolic process","termid":"GO:1903727"},{"relation_name":"positively_regulates","term_name":"phospholipid catabolic process","termid":"GO:0009395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of phospholipid catabolic process","termid":"GO:0060697"}


id: PR:O74515
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cia1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone cia1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.05c","synonyms":[{"name":"Spom972h-cia1","type":"exact"},{"name":"anti-silencing function protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74515"}


id: MONDO:0032820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with structural brain anomalies and dysmorphic facies","secondary_identifiers":["Orphanet:659609","UMLS:C5231416","OMIM:618577","MEDGEN:1684725"],"synonyms":[{"name":"NEDBAF","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH STRUCTURAL BRAIN ANOMALIES AND DYSMORPHIC FACIES","type":"related"}],"termid":"MONDO:0032820","xrefs":{"Monarch":{"xref_id":"0032820"}}}


id: GO:1903201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of oxidative stress-induced cell death.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:bf","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of oxidative stress-induced cell death (obsolete GO:1903201)","synonyms":[{"name":"regulation of cell death in response to oxidative stress","type":"exact"}],"termid":"GO:1903201"}


id: PBO:0038301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rnacentral_identifier","termid":"PBO:0038301"}


id: MONDO:0005544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Age-related neuropathological condition with severe neuronal cell loss and gliosis in the hippocampus","definition_xrefs":["EFO:0005678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex disorder","termid":"MONDO:0044996"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hippocampal sclerosis of aging","secondary_identifiers":["MEDGEN:1801569","UMLS:C5691287"],"termid":"MONDO:0005544","xrefs":{"Monarch":{"xref_id":"0005544"}}}


id: FYPO:0006153
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA binding at a STREP motif by a gene product does not occur, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished DNA binding","termid":"FYPO:0000659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000653","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished DNA binding at STREP motif","synonyms":[{"name":"DNA binding at STREP motif abolished","type":"exact"},{"name":"STREP motif binding abolished","type":"exact"},{"name":"abolished DNA binding at stress-starvation response element of Schizosaccharomyces pombe","type":"exact"}],"termid":"FYPO:0006153"}


id: GO:0033178
data:
  {"annotated_genes":["SJAG_00136","SJAG_01817","SJAG_01397","SJAG_00212","SJAG_01447","SJAG_01471","SJAG_04015","SJAG_04955"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[120757,98524,100829,72972,61019,111846,89892,104602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"A protein complex that forms part of a proton-transporting two-sector ATPase complex and catalyzes ATP hydrolysis or synthesis. The catalytic domain (F1, V1, or A1) comprises a hexameric catalytic core and a central stalk, and is peripherally associated with the membrane when the two-sector ATPase is assembled.","definition_xrefs":["PMID:10838056","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"proton-transporting two-sector ATPase complex","termid":"GO:0016469"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_04015":null,"SJAG_04955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proton-transporting two-sector ATPase complex, catalytic domain","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033178","terms_by_termid":{"GO:0000221":null}}


id: PR:O94684
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pmh1 gene.","definition_xrefs":["UniProtKB:O94684","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription factor B subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.18c","synonyms":[{"name":"CDK-activating kinase assembly factor MAT1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RING finger protein pmh1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II transcription factor B 38 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II transcription factor B p38 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pmh1","type":"exact"}],"termid":"PR:O94684"}


id: PBO:0082027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucanosyltransferase; has similarity to Gas1p; localizes to the cell wall","termid":"PBO:0082027"}


id: GO:0042491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized inner cell acquires specialized features of an auditory hair cell.","definition_xrefs":["CL:0000201","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair cell differentiation","termid":"GO:0035315"},{"relation_name":"is_a","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear auditory receptor cell differentiation","synonyms":[{"name":"auditory hair cell differentiation","type":"exact"},{"name":"auditory receptor cell differentiation","type":"related"}],"termid":"GO:0042491"}


id: GO:0102679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + (5alpha)-campestan-3-one + O2 + NADPH = (5alpha,22S,24R)-22-hydroxyergostan-3-one + H2O + NADP.","definition_xrefs":["PMID:10377996","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(5alpha)-campestan-3-one hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-4230"],"termid":"GO:0102679"}


id: MONDO:0011859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete distal myopathy with early respiratory muscle involvement (obsolete MONDO:0011859)","termid":"MONDO:0011859","xrefs":{"Monarch":{"xref_id":"0011859"}}}


id: PBO:0109356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLVCR choline and putative heme transporter 2","termid":"PBO:0109356"}


id: MONDO:0016045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetragametic chimerism is a rare, sex chromosome disorder of sex development characterized by the two different haploid sets of maternal and paternal chromosomes and variable phenotype - from normal male or female genitalia, to different degrees of ambiguous genitalia, and often infertility. Also, in the cases of monochorionic dizygotic twins, it can be confined to blood of both twins.","definition_xrefs":["Orphanet:199310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex chromosome disorder of sex development","termid":"MONDO:0017975"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetragametic chimerism","secondary_identifiers":["GARD:20332","MEDGEN:609542","UMLS:C0432480"],"synonyms":[{"name":"46,XX/46,XY chimerism","type":"exact"}],"termid":"MONDO:0016045","xrefs":{"Monarch":{"xref_id":"0016045"}}}


id: GO:0046387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving deoxyribose 1,5-bisphosphate, the diphosphorylated sugar 1,5-diphospho-2-deoxyribose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribose phosphate metabolic process","termid":"GO:0019692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deoxyribose 1,5-bisphosphate metabolic process","synonyms":[{"name":"deoxyribose 1,5-bisphosphate metabolism","type":"exact"}],"termid":"GO:0046387"}


id: PBO:0042609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 9","termid":"PBO:0042609"}


id: PBO:0036538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uricase Uro1","termid":"PBO:0036538"}


id: PR:000027552
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A.2 that has been post-translationally modified to include at least one phosphorylated residue.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A.2","termid":"PR:000027545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A.2 phosphorylated form","synonyms":[{"name":"HTA2/PhosRes+","type":"exact"}],"termid":"PR:000027552"}


id: PR:Q9HE15
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1399.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HE15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil phosphoribosyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1399.04c","synonyms":[{"name":"Spom972h-SPAC1399.04c","type":"exact"},{"name":"UMP pyrophosphorylase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UPRTase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HE15"}


id: PBO:0084487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific prospore protein; required for meiotic spindle pole body duplication and separation; required to produce bending force necessary for proper prospore membrane assembly during sporulation; has similarity to phospholipase B","termid":"PBO:0084487"}


id: PBO:0061121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 10","termid":"PBO:0061121"}


id: PBO:0027197
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubule_formation_from_nuclear_microtubules_following_nuclear_envelope_breakthrough","termid":"PBO:0027197"}


id: GO:0110166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA biosynthetic process that is involved in mitochondrial DNA replication.","definition_xrefs":["PMID:28408491","PMID:29931097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"},{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA replication","termid":"GO:0090592"},{"relation_name":"part_of","term_name":"mitochondrial DNA replication","termid":"GO:0006264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0007005","GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"DNA synthesis involved in mitochondrial DNA replication","synonyms":[{"name":"DNA biosynthetic process involved in mitochondrial DNA replication","type":"exact"}],"termid":"GO:0110166"}


id: MONDO:0011272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the EYS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"EYS-related retinopathy","termid":"MONDO:0800391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 25","secondary_identifiers":["MESH:C566425","OMIM:602772","UMLS:C1864446","DOID:0110384","ICD10CM:H35.5","GARD:10384","MEDGEN:350427"],"synonyms":[{"name":"EYS retinitis pigmentosa","type":"exact"},{"name":"RP 25","type":"related"},{"name":"RP25","type":"exact"},{"name":"retinitis pigmentosa 25","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in EYS","type":"exact"},{"name":"retinitis pigmentosa type 25","type":"exact"}],"termid":"MONDO:0011272","xrefs":{"Monarch":{"xref_id":"0011272"}}}


id: PBO:0065483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome activator subunit 2 pseudogene 2","termid":"PBO:0065483"}


id: GO:0004906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interferon-gamma (a type II interferon) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["PMID:15546383","ISBN:0126896631","GOC:signaling","GOC:ai","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon receptor activity","termid":"GO:0004904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"type II interferon receptor activity","synonyms":[{"name":"IFN-gamma receptor activity","type":"exact"},{"name":"IFNG receptor activity","type":"exact"},{"name":"interferon-gamma receptor activity","type":"exact"}],"termid":"GO:0004906"}


id: MONDO:0012364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dilated cardiomyopathy that has material basis in variation in the chromosome region 7q22.3-q31.1.","definition_xrefs":["PMID:16228230","DOID:0110442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1Q","secondary_identifiers":["OMIM:609915","MEDGEN:332088","MESH:C563688","GARD:15470","UMLS:C1835926"],"synonyms":[{"name":"CMD1Q","type":"exact"},{"name":"cardiomyopathy, dilated, 1Q","type":"related"},{"name":"dilated cardiomyopathy type 1Q","type":"exact"}],"termid":"MONDO:0012364","xrefs":{"Monarch":{"xref_id":"0012364"}}}


id: MONDO:0007851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any keratoconus in which the cause of the disease is a mutation in the VSX1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratoconus","termid":"MONDO:0015486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"keratoconus 1","secondary_identifiers":["MESH:C563649","UMLS:C1835677","MEDGEN:372103","OMIM:148300"],"synonyms":[{"name":"KTCN1","type":"related"},{"name":"VSX1 keratoconus (disease)","type":"exact"},{"name":"keratoconus (disease) caused by mutation in VSX1","type":"exact"},{"name":"keratoconus 1","type":"exact"},{"name":"keratoconus type 1","type":"exact"}],"termid":"MONDO:0007851","xrefs":{"Monarch":{"xref_id":"0007851"}}}


id: GO:0070769
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaIIb-beta3 integrin complex bound to CIB, a protein that binds calcium as well as the alphaIIb-beta3 integrin.","definition_xrefs":["PMID:9030514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alphaIIb-beta3 integrin-CIB complex","synonyms":[{"name":"ITGA2B-ITGB3-CIB1 complex","type":"narrow"}],"termid":"GO:0070769"}


id: PBO:0116577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gocam_title_termid","termid":"PBO:0116577"}


id: PBO:0084537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the p14.5 protein family; functionally complements Mmf1p function when targeted to mitochondria; heat shock inducible; high-dosage growth inhibitor; forms a homotrimer in vitro; HMF1 has a paralog, MMF1, that arose from the whole genome duplication","termid":"PBO:0084537"}


id: FYPO:0007990
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize isoleucine, and therefore requires isoleucine in the medium for vegetative cell growth.","definition_xrefs":["PMID:35325114","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for isoleucine","synonyms":[{"name":"growth auxotrophic for isoleucine during mitotic cell cycle","type":"exact"},{"name":"growth auxotrophic for isoleucine during vegetative growth","type":"exact"},{"name":"isoleucine auxotrophy","type":"exact"}],"termid":"FYPO:0007990"}


id: PATO:0001802
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pattern quality inhering in a bearer by virtue of the bearer's not being compact or dense in arrangement.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"irregular spatial pattern","termid":"PATO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loose","termid":"PATO:0001802"}


id: GO:0019000
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["PMID:12444964","PMID:12928502","PMID:12941691"],"gene_count":0,"genotype_count":0,"name":"obsolete endonuclease G activity (obsolete GO:0019000)","synonyms":[{"name":"endonuclease G activity","type":"exact"}],"termid":"GO:0019000"}


id: MONDO:0800379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"17-alpha-hydroxylase/17,20-lyase deficiency, combined complete","termid":"MONDO:0800379","xrefs":{"Monarch":{"xref_id":"0800379"}}}


id: PBO:0078173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 1-4","termid":"PBO:0078173"}


id: GO:0102515
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pelargonidin 3-O-beta-D-glucoside + 1-O-feruloyl-beta-D-glucose = pelargonidin 3,7-di-O-beta-D-glucoside + ferulate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete pelargonidin 3-O-glucoside 7-O-glucosyltransferase (feruloyl-glucose dependent) activity (obsolete GO:0102515)","termid":"GO:0102515"}


id: PBO:0074105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 28 member 2","termid":"PBO:0074105"}


id: GO:0047360
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-undecaprenyl phosphate + UDP-D-galactose = alpha-D-galactosyl-diphosphoundecaprenol + UMP.","definition_xrefs":["RHEA:11652","EC:2.7.8.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016780","GO:0016740"],"is_obsolete":false,"name":"undecaprenyl-phosphate galactose phosphotransferase activity","secondary_identifiers":["KEGG_REACTION:R01535","MetaCyc:2.7.8.6-RXN"],"synonyms":[{"name":"UDP-galactose:undecaprenyl-phosphate galactose phosphotransferase activity","type":"related"},{"name":"poly(isoprenol)-phosphate galactose phosphotransferase activity","type":"related"},{"name":"poly(isoprenol)-phosphate galactosephosphotransferase activity","type":"related"},{"name":"poly(isoprenyl)phosphate galactosephosphatetransferase activity","type":"related"},{"name":"undecaprenyl phosphate galactosyl-1-phosphate transferase activity","type":"related"}],"termid":"GO:0047360"}


id: PBO:0090515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NuA4 and Swr1 complex YEATS family subunit Yaf9","termid":"PBO:0090515"}


id: PR:Q9UUG1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome production factor 2 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01618","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome production factor 2 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC926.08c","secondary_identifiers":["UniProtKB:Q9UUG1"],"synonyms":[{"name":"Spom972h-RPF2","type":"exact"},{"name":"brix domain-containing protein 1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ribosome biogenesis protein RPF2 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUG1"}


id: MONDO:0017095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated focal cortical dysplasia","termid":"MONDO:0019009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated focal cortical dysplasia type I","secondary_identifiers":["GARD:20983","MEDGEN:1843077","Orphanet:268961","UMLS:C5679772"],"synonyms":[{"name":"FCD type I","type":"exact"}],"termid":"MONDO:0017095","xrefs":{"Monarch":{"xref_id":"0017095"}}}


id: MONDO:0007195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bifid nose","termid":"MONDO:0000110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifid nose, autosomal dominant","secondary_identifiers":["UMLS:C2751431","OMIM:109740","GARD:15044","MEDGEN:414016"],"synonyms":[{"name":"bifid nose, autosomal dominant","type":"exact"}],"termid":"MONDO:0007195","xrefs":{"Monarch":{"xref_id":"0007195"}}}


id: PBO:0088918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine acetyltransferase Rtt109","termid":"PBO:0088918"}


id: PBO:0036003
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_cadmium_ion","termid":"PBO:0036003"}


id: GO:0031079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of GlnGly bond in the poliovirus polyprotein. In other picornavirus reactions Glu may be substituted for Gln, and Ser or Thr for Gly.","definition_xrefs":["EC:3.4.22.28"],"gene_count":0,"genotype_count":0,"name":"obsolete picornain 3C activity (obsolete GO:0031079)","synonyms":[{"name":"3C protease activity","type":"related"},{"name":"3C proteinase activity","type":"related"},{"name":"coxsackievirus 3C proteinase activity","type":"related"},{"name":"cysteine proteinase 3C","type":"related"},{"name":"foot-and-mouth protease 3C activity","type":"narrow"},{"name":"foot-and-mouth-disease virus proteinase 3C","type":"related"},{"name":"hepatitis A virus 3C proteinase activity","type":"related"},{"name":"picornain 3C activity","type":"exact"},{"name":"picornavirus endopeptidase 3C activity","type":"narrow"},{"name":"poliovirus protease 3C activity","type":"narrow"},{"name":"poliovirus proteinase 3C","type":"related"},{"name":"protease 3C","type":"related"},{"name":"rhinovirus protease 3C activity","type":"narrow"},{"name":"rhinovirus proteinase 3C","type":"related"},{"name":"tomato ringspot nepovirus 3C-related protease","type":"related"}],"termid":"GO:0031079"}


id: PBO:0039521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B pseudogene 2","termid":"PBO:0039521"}


id: PBO:0000280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fen1 family nuclease, XP-G family (predicted)","termid":"PBO:0000280"}


id: MONDO:1012960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Herediatary cerebellar ataxia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, non-human animal","termid":"MONDO:1012956"},{"relation_name":"is_a","term_name":"hereditary ataxia, non-human animal","termid":"MONDO:1012959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary cerebellar ataxia, non-human animal","termid":"MONDO:1012960","xrefs":{"Monarch":{"xref_id":"1012960"}}}


id: RO:0000086
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between an independent continuant (the bearer) and a quality, in which the quality specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"bearer_of","termid":"RO:0000053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_quality","termid":"RO:0000086"}


id: PBO:0082967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein required for replication of Brome mosaic virus; S. cerevisiae is a model system for studying replication of positive-strand RNA viruses in their natural hosts","termid":"PBO:0082967"}


id: GO:0032771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the activity of a tyrosinase enzyme.","definition_xrefs":["GOC:dph","PMID:2494997","GOC:mah","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of tyrosinase activity (obsolete GO:0032771)","synonyms":[{"name":"regulation of monophenol monooxygenase activity","type":"related"},{"name":"regulation of monophenol oxygenase activity","type":"exact"}],"termid":"GO:0032771"}


id: PBO:0073530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing GRB2 like 1, endophilin A2 pseudogene 3","termid":"PBO:0073530"}


id: PBO:0073486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shugoshin 1","termid":"PBO:0073486"}


id: PBO:0069062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 309, pseudogene","termid":"PBO:0069062"}


id: PBO:0031610
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_transport","termid":"PBO:0031610"}


id: PBO:0053006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal associated membrane protein 1 pseudogene 1","termid":"PBO:0053006"}


id: PBO:0046352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 10","termid":"PBO:0046352"}


id: MONDO:0800134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An immunodeficiency disease caused by a variation in the CRACR2A gene.","definition_xrefs":["PMID:35151051","PMID:34908525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"primary immunodeficiency due to calcium channel deficiency","termid":"MONDO:0800134","xrefs":{"Monarch":{"xref_id":"0800134"}}}


id: MONDO:0018777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrichosis","termid":"MONDO:0019280"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant preaxial polydactyly-upperback hypertrichosis syndrome","secondary_identifiers":["MEDGEN:1800225","Orphanet:476119","UMLS:C5568802","GARD:21953"],"termid":"MONDO:0018777","xrefs":{"Monarch":{"xref_id":"0018777"}}}


id: MONDO:0000341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poliomyelitis that results in destruction located in motor neurons of central nervous system, has material basis in Human poliovirus 1, has material basis in Human poliovirus 2, or has material basis in Human poliovirus 3, which are transmitted by ingestion of food or water contaminated with feces, or transmitted by direct contact with the oral secretions. The infection has symptom loss of reflexes, has symptom muscle spasms, and has symptom acute flaccid paralysis.","definition_xrefs":["DOID:0050515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poliomyelitis","termid":"MONDO:0017373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"paralytic poliomyelitis","secondary_identifiers":["UMLS:C1405301","MEDGEN:1684656"],"termid":"MONDO:0000341","xrefs":{"Monarch":{"xref_id":"0000341"}}}


id: PBO:0073993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 3","termid":"PBO:0073993"}


id: GO:0042628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The deposition of a plug of sperm or other gelatinous material into the opening of the vulva by a male at the termination of copulation. Probably acts to prevent subsequent matings by other males.","definition_xrefs":["GOC:jl","PMID:11267893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"insemination","termid":"GO:0007320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mating plug formation","synonyms":[{"name":"copulatory plug biosynthesis","type":"exact"},{"name":"copulatory plug deposition","type":"exact"},{"name":"copulatory plug formation","type":"exact"},{"name":"mating plug deposition","type":"exact"}],"termid":"GO:0042628"}


id: PBO:0083246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; gene expression induced by heat","termid":"PBO:0083246"}


id: GO:0035119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the pelvic fin are generated and organized. The pelvic fins are bilaterally paired fins mounted in a ventral-lateral position on most fish. These fins are used primarily for lateral mobility and propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic appendage morphogenesis","termid":"GO:0035113"},{"relation_name":"is_a","term_name":"pelvic fin morphogenesis","termid":"GO:0035139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic pelvic fin morphogenesis","termid":"GO:0035119"}


id: MONDO:0011368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papillary carcinoma of the thyroid gland measuring 10mm or less in diameter. The survival rates of patients with this type of carcinoma are the same with those of the normal population.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial papillary or follicular thyroid carcinoma","termid":"MONDO:0017895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"papillary thyroid Microcarcinoma","secondary_identifiers":["MEDGEN:313563","MESH:C563277","NCIT:C46004","OMIM:603744","UMLS:C1709457","ICDO:8341/3","GARD:15358"],"synonyms":[{"name":"papillary Microcarcinoma of the thyroid","type":"exact"},{"name":"papillary Microcarcinoma of the thyroid gland","type":"exact"},{"name":"papillary thyroid Microcarcinoma","type":"exact"},{"name":"papillary thyroid gland Microcarcinoma","type":"exact"},{"name":"thyroid gland papillary Microcarcinoma","type":"exact"}],"termid":"MONDO:0011368","xrefs":{"Monarch":{"xref_id":"0011368"}}}


id: MONDO:0004959
data:
  {"annotated_genes":["SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009693"}]},"cv_name":"mondo","definition":"A clonal proliferation of immunoglobulin-secreting plasma cells. This category includes plasma cell myeloma, plasma cell leukemia, plasmacytoma, monoclonal immunoglobulin deposition disease, and monoclonal gammopathy of undetermined significance.","definition_xrefs":["NCIT:C4665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of mature B-cells","termid":"MONDO:0004949"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"plasma cell neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:415111003","EFO:0000200","GARD:19440","ICD9:238.6","MEDGEN:368758","UMLS:C1959632","DOID:6536","Orphanet:98282","MESH:D054219"],"synonyms":[{"name":"plasma cell disorder","type":"related"},{"name":"plasma cell dyscrasia","type":"exact"},{"name":"plasma cell neoplasm","type":"exact"},{"name":"plasma cell tumor","type":"exact"},{"name":"plasma cell tumor, malignant","type":"exact"},{"name":"plasma cell tumour","type":"exact"},{"name":"plasmacytic neoplasm","type":"exact"},{"name":"plasmacytic tumor","type":"exact"},{"name":"plasmacytic tumour","type":"exact"}],"termid":"MONDO:0004959","terms_by_termid":{"MONDO:0009693":null},"xrefs":{"Monarch":{"xref_id":"0004959"}}}


id: PBO:0066334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC1 and BTB domain containing protein 2 pseudogene 1","termid":"PBO:0066334"}


id: GO:0030681
data:
  {"annotated_genes":["SJAG_04916","SJAG_00955","SJAG_03234","SJAG_01369","SJAG_02547","SJAG_06613","SJAG_01623","SJAG_03796","SJAG_04582","SJAG_02553","SJAG_00306"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[117392,92962,60959,73168,106497,120622,73504,72935,101404,117304,64509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005655"}]},"cv_name":"cellular_component","definition":"A ribonuclease P complex that generally contains a single RNA molecule and several protein molecules. Examples of this complex are found in Archaeal species.","definition_xrefs":["PMID:12045094","GOC:mah","PMID:11142368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonuclease P complex","termid":"GO:0030677"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00306":null,"SJAG_00955":null,"SJAG_01369":null,"SJAG_01623":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03796":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"multimeric ribonuclease P complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"multimeric RNase P complex","type":"exact"}],"termid":"GO:0030681","terms_by_termid":{"GO:0005655":null}}


id: PBO:0003316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double-strand-specific ribonuclease Pac1","termid":"PBO:0003316"}


id: PBO:0087786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfiredoxin; contributes to oxidative stress resistance by reducing cysteine-sulfinic acid groups in the peroxiredoxin Tsa1p, which is formed upon exposure to oxidants; conserved in higher eukaryotes; protein abundance increases in response to DNA replication stress","termid":"PBO:0087786"}


id: PBO:0083276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; deletion mutation blocks replication of Brome mosaic virus in S. cerevisiae, but this is likely due to effects on the overlapping gene SCS2","termid":"PBO:0083276"}


id: PR:Q9C0U6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A xylulose kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04422","PRO:DNx","PANTHER:PTHR10196:SF10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylulose kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPJ732.02c","secondary_identifiers":["UniProtKB:Q9C0U6"],"synonyms":[{"name":"Spom972h-XYLB","type":"exact"},{"name":"Xylulokinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9C0U6"}


id: GO:0150089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a synapse between a multiple synapse bouton and one or more dendritic spines.","definition_xrefs":["PMID:29774619","PMID:7482800","GOC:aruk","PMID:8366344","PMID:10586883","PMID:11466428","PMID:18501438","GOC:bc","PMID:11248111","PMID:22028887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multiple spine synapse organization","synonyms":[{"name":"multi-synapse organisation","type":"broad"},{"name":"multi-synapse organization","type":"broad"},{"name":"multi-synaptic organisation","type":"broad"},{"name":"multi-synaptic organization","type":"broad"},{"name":"multiple spine synapse organisation","type":"exact"},{"name":"multisynapse organisation","type":"broad"},{"name":"multisynapse organization","type":"broad"},{"name":"multisynaptic organisation","type":"broad"},{"name":"multisynaptic organization","type":"broad"}],"termid":"GO:0150089"}


id: PATO:0002468
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structure quality inhering in a bearer by virtue of the bearer's being capable of swelling or stretching.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distensible","termid":"PATO:0002468"}


id: PBO:0066471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rieske (Fe-S) domain containing pseudogene 1","termid":"PBO:0066471"}


id: GO:0003986
data:
  {"annotated_genes":["SJAG_02769","SJAG_02985"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77215,78560],"is_not":false,"summary":null,"term":"GO:0003986"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + H2O = acetate + CoA + H+.","definition_xrefs":["RHEA:20289","EC:3.1.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02769":null,"SJAG_02985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"acetyl-CoA hydrolase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-2066779","KEGG_REACTION:R00227","Reactome:R-HSA-390304","MetaCyc:ACETYL-COA-HYDROLASE-RXN"],"synonyms":[{"name":"acetyl coenzyme A acylase activity","type":"related"},{"name":"acetyl coenzyme A deacylase activity","type":"related"},{"name":"acetyl coenzyme A hydrolase activity","type":"related"},{"name":"acetyl-CoA acylase activity","type":"related"},{"name":"acetyl-CoA deacylase activity","type":"related"},{"name":"acetyl-CoA thiol esterase activity","type":"related"}],"termid":"GO:0003986","terms_by_termid":{"GO:0003986":null}}


id: GO:0019093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which mitochondrial RNA is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization","termid":"GO:0006403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mitochondrial RNA localization","synonyms":[{"name":"establishment and maintenance of mitochondrial RNA localization","type":"exact"},{"name":"mitochondrial RNA localisation","type":"exact"},{"name":"mtRNA localization","type":"exact"}],"termid":"GO:0019093"}


id: GO:0110074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apical constriction involved in ventral furrow formation.","definition_xrefs":["GOC:ha","PMID:28495958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apical constriction involved in ventral furrow formation","termid":"GO:0110073"},{"relation_name":"is_a","term_name":"positive regulation of actin filament-based movement","termid":"GO:1903116"},{"relation_name":"positively_regulates","term_name":"apical constriction involved in ventral furrow formation","termid":"GO:0110072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apical constriction involved in ventral furrow formation","termid":"GO:0110074"}


id: PBO:0075493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily F member 3","termid":"PBO:0075493"}


id: PBO:0075736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP14 pseudogene 4","termid":"PBO:0075736"}


id: PBO:0074439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 40","termid":"PBO:0074439"}


id: FYPO:0000676
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which protein targeting to the vacuole is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"},{"relation_name":"is_a","term_name":"abnormal protein targeting during vegetative growth","termid":"FYPO:0000675"},{"relation_name":"is_a","term_name":"abnormal protein localization to vacuole","termid":"FYPO:0005490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein targeting to vacuole","synonyms":[{"name":"abnormal protein targeting to vacuole during mitotic cell cycle","type":"related"},{"name":"abnormal protein targeting to vacuole during vegetative growth","type":"exact"},{"name":"abnormal vacuolar protein sorting","type":"exact"}],"termid":"FYPO:0000676"}


id: PBO:0117097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB12 antisense RNA 1","termid":"PBO:0117097"}


id: MONDO:0008901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tel Hashomer camptodactyly syndrome is a rare syndrome characterized by camptodactyly, muscle hypoplasia and weakness, skeletal anomalies, facial dysmorphism and abnormal dermatoglyphics.","definition_xrefs":["PMID:24171333","Orphanet:3292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle disorder","termid":"MONDO:0020120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tel Hashomer camptodactyly syndrome","secondary_identifiers":["MESH:C536953","OMIM:211960","MEDGEN:347860","SCTID:719946008","GARD:5128","UMLS:C1859356"],"synonyms":[{"name":"Tel Hashomer camptodactyly syndrome","type":"exact"},{"name":"camptodactyly with muscular hypoplasia, skeletal dysplasia, and abnormal palmar creases","type":"related"}],"termid":"MONDO:0008901","xrefs":{"Monarch":{"xref_id":"0008901"}}}


id: PBO:0059063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB kinase activator 3B","termid":"PBO:0059063"}


id: PBO:0040230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 4 pseudogene 2","termid":"PBO:0040230"}


id: MONDO:0008096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nevus flammeus of nape of neck","secondary_identifiers":["OMIM:163100","MEDGEN:437278","UMLS:C2697447","MESH:C567524"],"synonyms":[{"name":"Unna Nevus","type":"related"},{"name":"erythema nuchae","type":"related"},{"name":"nevus flammeus of nape of neck","type":"exact"}],"termid":"MONDO:0008096","xrefs":{"Monarch":{"xref_id":"0008096"}}}


id: PBO:0062481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily M member 1 pseudogene","termid":"PBO:0062481"}


id: GO:0072410
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"}]},"cv_name":"biological_process","definition":"A process that acts directly to delay or stop progression through the cell cycle in response to signals generated as a result of meiotic cell cycle checkpoint signaling; contributes to a meiotic cell cycle checkpoint.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cell cycle checkpoint signaling","termid":"GO:0072396"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to meiotic cell cycle checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiotic cell cycle checkpoint effector process","type":"exact"},{"name":"response to signal involved in meiotic cell cycle checkpoint","type":"exact"}],"termid":"GO:0072410","terms_by_termid":{"GO:0072441":null}}


id: PATO:0001126
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001126 relative pressure value (obsolete PATO:0001126)","termid":"PATO:0001126"}


id: PBO:0013773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy protein Atg101","termid":"PBO:0013773"}


id: PBO:0064985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich protein BstNI subfamily 2","termid":"PBO:0064985"}


id: GO:0001853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C3dg product of the complement cascade.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement binding","termid":"GO:0001848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"complement component C3dg binding","termid":"GO:0001853"}


id: PBO:0048612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, IMAP family member 4","termid":"PBO:0048612"}


id: MONDO:0958160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small cell sarcoma that is characterized by the presence of EWSR1 or FUS fusions involving partners unrelated to the ETS gene family.","definition_xrefs":["DOID:0081406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell sarcoma","termid":"MONDO:0006974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"round cell sarcoma with EWSR1-non-ETS fusion","secondary_identifiers":["UMLS:C4727985","NCIT:C178459","MEDGEN:1790023"],"termid":"MONDO:0958160","xrefs":{"Monarch":{"xref_id":"0958160"}}}


id: MONDO:0024337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a urothelium.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system neoplasm","termid":"MONDO:0021066"},{"relation_name":"is_a","term_name":"transitional cell neoplasm","termid":"MONDO:0037254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urothelial neoplasm","secondary_identifiers":["MEDGEN:275551","NCIT:C39852","UMLS:C1519840"],"synonyms":[{"name":"neoplasm of urothelium","type":"exact"},{"name":"transitional cell neoplasm of the urinary tract","type":"exact"},{"name":"tumor of urothelium","type":"exact"},{"name":"tumour of urothelium","type":"exact"},{"name":"urothelial neoplasm","type":"exact"},{"name":"urothelium neoplasm","type":"exact"},{"name":"urothelium neoplasm (disease)","type":"exact"},{"name":"urothelium tumor","type":"exact"},{"name":"urothelium tumour","type":"exact"}],"termid":"MONDO:0024337","xrefs":{"Monarch":{"xref_id":"0024337"}}}


id: MONDO:0008156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sclerosing disorder of the skeleton characterized by increased bone density that classically displays the radiographic sign of ''sandwich vertebrae'' (dense bands of sclerosis parallel to the vertebral endplates).","definition_xrefs":["Orphanet:53"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete unclassified primitive or secondary maculopathy (obsolete MONDO:0020244)","termid":"MONDO:0020244"},{"relation_name":"excluded_subClassOf","term_name":"hereditary optic neuropathy","termid":"MONDO:0020249"},{"relation_name":"is_a","term_name":"autosomal dominant osteopetrosis","termid":"MONDO:0020645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant osteopetrosis 2","secondary_identifiers":["MEDGEN:465707","GARD:383","OMIM:166600","DOID:0110938","SCTID:725050005","UMLS:C3179239"],"synonyms":[{"name":"Albers-Schonberg disease, autosomal dominant","type":"related"},{"name":"Albers-Schonberg osteopetrosis","type":"exact"},{"name":"Albers-Schönberg osteopetrosis","type":"exact"},{"name":"OPTA2","type":"exact"},{"name":"autosomal dominant Albers-Schonberg disease","type":"exact"},{"name":"autosomal dominant osteopetrosis type 2","type":"exact"},{"name":"autosomal dominant osteopetrosis type II","type":"exact"},{"name":"marble bones, autosomal dominant","type":"related"},{"name":"osteopetrosis autosomal dominant type 2","type":"exact"},{"name":"osteopetrosis, autosomal dominant 2","type":"related"},{"name":"osteopetrosis, autosomal dominant type 2","type":"exact"},{"name":"osteopetrosis, autosomal dominant, type 2","type":"related"},{"name":"osteosclerosis Fragilis generalisata","type":"related"}],"termid":"MONDO:0008156","xrefs":{"Monarch":{"xref_id":"0008156"}}}


id: MONDO:0008948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerebrotendinous xanthomatosis (CTX) is an anomaly of bile acid synthesis characterized by neonatal cholestasis, childhood-onset cataract, adolescent to young adult-onset tendon xanthomata, and brain xanthomata with adult-onset neurologic dysfunction.","definition_xrefs":["Orphanet:909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthomatosis","termid":"MONDO:0002615"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"inborn disorder of bile acid synthesis","termid":"MONDO:0019218"},{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"},{"relation_name":"is_a","term_name":"autosomal recessive metabolic cerebellar ataxia","termid":"MONDO:0020044"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"cerebral lipidosis with dementia","termid":"MONDO:0020143"},{"relation_name":"is_a","term_name":"cholesterol catabolic process disease","termid":"MONDO:0045016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0002039","MONDO:0006025","MONDO:0002525","MONDO:0002561","MONDO:0005559","MONDO:0005244"],"is_obsolete":false,"name":"cerebrotendinous xanthomatosis","secondary_identifiers":["GARD:5622","SCTID:63246000","NORD:915","OMIM:213700","DOID:4810","NANDO:1200856","icd11.foundation:1556875179","MEDGEN:116041","NCIT:C84628","MESH:D019294","UMLS:C0238052"],"synonyms":[{"name":"CTX","type":"exact"},{"name":"CTx","type":"exact"},{"name":"cerebral cholesterinosis","type":"related"},{"name":"cerebrotendinous xanthomatosis","type":"exact"},{"name":"cholestanol storage disease","type":"exact"},{"name":"sterol 27-hydroxylase deficiency","type":"exact"}],"termid":"MONDO:0008948","xrefs":{"Monarch":{"xref_id":"0008948"}}}


id: PBO:0041120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 3","termid":"PBO:0041120"}


id: MONDO:0019499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Turner syndrome is a chromosomal disorder associated with the complete or partial absence of an X chromosome.","definition_xrefs":["Orphanet:881"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"gonadal dysgenesis","termid":"MONDO:0001967"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"sex chromosome disorder of sex development","termid":"MONDO:0017975"},{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"Turner syndrome","secondary_identifiers":["NANDO:2200410","GARD:7831","NORD:1806","MedDRA:10045181","NCIT:C26900","MEDGEN:21734","SCTID:38804009","icd11.foundation:1987089698","MESH:D014424","ICD9:758.7","UMLS:C0041408","DOID:3491"],"synonyms":[{"name":"45, X syndrome","type":"related"},{"name":"45,X gonadal dysgenesis","type":"exact"},{"name":"45,X syndrome","type":"exact"},{"name":"45,X/46,XX syndrome","type":"exact"},{"name":"45,X0 syndrome","type":"exact"},{"name":"45X syndrome","type":"exact"},{"name":"Bonnevie-Ullrich syndrome","type":"related"},{"name":"Schereshevkii Turner syndrome","type":"related"},{"name":"Turner Varny syndrome","type":"related"},{"name":"Ullrich-Turner syndrome","type":"related"},{"name":"XO syndrome","type":"exact"},{"name":"chromosome X monosomy X","type":"related"},{"name":"genital dwarfism","type":"related"},{"name":"genital dwarfism, Turner type","type":"related"},{"name":"gonadal dysgenesis","type":"broad"},{"name":"gonadal dysgenesis (45,X)","type":"related"},{"name":"gonadal dysgenesis - Turner","type":"exact"},{"name":"gonadal dysgenesis Turner type","type":"related"},{"name":"karyotype 45, X","type":"exact"},{"name":"monosomy X","type":"narrow"},{"name":"monosomy X syndrome","type":"exact"}],"termid":"MONDO:0019499","xrefs":{"Monarch":{"xref_id":"0019499"}}}


id: PR:O59703
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo9 gene.","definition_xrefs":["UniProtKB:O59703","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geranylgeranyl pyrophosphate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.06c","synonyms":[{"name":"(2E,6E)-farnesyl diphosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Dimethylallyltranstransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Farnesyltranstransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GGPP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GGPPSase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Geranyltranstransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-spo9","type":"exact"},{"name":"farnesyl diphosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"geranylgeranyl diphosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sporulation-specific protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59703"}


id: MONDO:0004157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pancreatic mucinous cystadenoma (obsolete MONDO:0004157)","termid":"MONDO:0004157","xrefs":{"Monarch":{"xref_id":"0004157"}}}


id: PBO:0057743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1538","termid":"PBO:0057743"}


id: MONDO:0019588
data:
  {"annotated_genes":["SJAG_01941","SJAG_04554","SJAG_00365","SJAG_03007","SJAG_00164","SJAG_01538","SJAG_00244","SJAG_04856","SJAG_02463","SJAG_04558","SJAG_00082","SJAG_03536","SJAG_00488","SJAG_02155","SJAG_01400","SJAG_04409"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011067"},{"annotations":[88453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012091"},{"annotations":[87146,87147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010933"},{"annotations":[88596,88597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013471"},{"annotations":[88879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013386"},{"annotations":[87634,87633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014237"},{"annotations":[88562,88563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013489"},{"annotations":[88970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032740"},{"annotations":[87207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033199"},{"annotations":[88085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032639"},{"annotations":[89000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032761"},{"annotations":[89003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032762"},{"annotations":[88975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958277"},{"annotations":[88980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032749"}]},"cv_name":"mondo","definition":"Autosomal recessive form of nonsyndromic deafness.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"prelingual non-syndromic genetic hearing loss","termid":"MONDO:0016297"},{"relation_name":"excluded_subClassOf","term_name":"postlingual non-syndromic genetic hearing loss","termid":"MONDO:0016298"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"nonsyndromic genetic hearing loss","termid":"MONDO:0019497"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00164":null,"SJAG_00244":null,"SJAG_00365":null,"SJAG_00488":null,"SJAG_01400":null,"SJAG_01538":null,"SJAG_01941":null,"SJAG_02155":null,"SJAG_02463":null,"SJAG_03007":null,"SJAG_03536":null,"SJAG_04409":null,"SJAG_04554":null,"SJAG_04558":null,"SJAG_04856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:220290","Orphanet:90636","GARD:18117","MESH:C564609","DOID:0050565","OMIM:607197","MEDGEN:337623","UMLS:C1846647"],"synonyms":[{"name":"autosomal recessive isolated neurosensory deafness type DFNB","type":"narrow"},{"name":"autosomal recessive isolated sensorineural deafness type DFNB","type":"narrow"},{"name":"autosomal recessive non-syndromic neurosensory deafness type DFNB","type":"narrow"},{"name":"autosomal recessive non-syndromic sensorineural deafness type DFNB","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive nonsyndromic genetic deafness","type":"narrow"},{"name":"deafness, autosomal recessive","type":"narrow"},{"name":"deafness, neurosensory nonsyndromic recessive, DFN","type":"narrow"},{"name":"hearing loss, autosomal recessive","type":"exact"},{"name":"nonsyndromic deafness, autosomal recessive","type":"narrow"},{"name":"nonsyndromic genetic deafness, autosomal recessive","type":"narrow"}],"termid":"MONDO:0019588","terms_by_termid":{"MONDO:0010933":null,"MONDO:0011067":null,"MONDO:0012091":null,"MONDO:0013386":null,"MONDO:0013471":null,"MONDO:0013489":null,"MONDO:0014237":null,"MONDO:0032639":null,"MONDO:0032740":null,"MONDO:0032749":null,"MONDO:0032761":null,"MONDO:0032762":null,"MONDO:0033199":null,"MONDO:0958277":null},"xrefs":{"Monarch":{"xref_id":"0019588"}}}


id: MONDO:0009165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Aicardi-Goutieres syndrome in which the cause of the disease is a mutation in the TREX1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Aicardi-Goutieres syndrome","termid":"MONDO:0018866"},{"relation_name":"is_a","term_name":"TREX1-related type 1 interferonopathy","termid":"MONDO:0700256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"Aicardi-Goutieres syndrome 1","secondary_identifiers":["MEDGEN:162912","NCIT:C165501","GARD:15167","OMIM:225750","UMLS:C0796126"],"synonyms":[{"name":"AGS1","type":"related"},{"name":"Ags","type":"related"},{"name":"Aicardi-Goutieres syndrome 1","type":"exact"},{"name":"Aicardi-Goutieres syndrome 1, autosomal dominant","type":"related"},{"name":"Aicardi-Goutieres syndrome 1, dominant and recessive","type":"exact"},{"name":"Aicardi-Goutieres syndrome caused by mutation in TREX1","type":"exact"},{"name":"Aicardi-Goutieres syndrome type 1","type":"exact"},{"name":"Cree encephalitis","type":"related"},{"name":"Pseudotoxoplasmosis syndrome","type":"related"},{"name":"TREX1 Aicardi-Goutieres syndrome","type":"exact"},{"name":"encephalopathy, familial infantile, with intracranial calcification and chronic cerebrospinal fluid lymphocytosis","type":"related"}],"termid":"MONDO:0009165","xrefs":{"Monarch":{"xref_id":"0009165"}}}


id: _global:gained
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X gained Y if X is a variant_of X' and Y part of X but not X'.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gained","termid":"_global:gained"}


id: PBO:0084450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannose-6-phosphate isomerase; catalyzes the interconversion of fructose-6-P and mannose-6-P; required for early steps in protein mannosylation","termid":"PBO:0084450"}


id: GO:0021538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the epithalamus over time from its initial formation until its mature state. The epithalamus is the small dorsomedial area of the thalamus including the habenular nuclei and associated fiber bundles, the pineal body, and the epithelial roof of the third ventricle.","definition_xrefs":["GOC:dph","GOC:cls","GOC:dgh","GOC:jid","ISBN:0838580343","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"diencephalon development","termid":"GO:0021536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithalamus development","termid":"GO:0021538"}


id: GO:1900150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of defense response to fungus.","definition_xrefs":["PMID:22242006","GOC:dhl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"defense response to fungus","termid":"GO:0050832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response to fungus","secondary_identifiers":["GO:2000072"],"synonyms":[{"name":"regulation of defence response to fungi","type":"exact"},{"name":"regulation of defence response to fungus","type":"exact"},{"name":"regulation of defense response to fungi","type":"exact"},{"name":"regulation of defense response to fungi, incompatible interaction","type":"narrow"},{"name":"regulation of defense response to fungus, incompatible interaction","type":"narrow"},{"name":"regulation of resistance response to pathogenic fungi","type":"narrow"},{"name":"regulation of resistance response to pathogenic fungus","type":"narrow"},{"name":"regulation of response to pathogenic fungus (incompatible interaction)","type":"narrow"}],"termid":"GO:1900150"}


id: PBO:0012606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 7, Pre10 (predicted)","termid":"PBO:0012606"}


id: PBO:0054474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1874","termid":"PBO:0054474"}


id: MONDO:0014059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microphthalmia, isolated, with coloboma in which the cause of the disease is a mutation in the TENM3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, isolated, with coloboma","termid":"MONDO:0000170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, isolated, with coloboma 9","secondary_identifiers":["OMIM:615145","MEDGEN:767506","UMLS:C3554592","GARD:15909"],"synonyms":[{"name":"MCOPCB9","type":"related"},{"name":"TENM3 microphthalmia, isolated, with coloboma","type":"exact"},{"name":"microphthalmia, isolated, with coloboma 9","type":"exact"},{"name":"microphthalmia, isolated, with coloboma caused by mutation in TENM3","type":"exact"},{"name":"microphthalmia, isolated, with coloboma type 9","type":"exact"},{"name":"microphthalmia, syndromic 15","type":"exact"}],"termid":"MONDO:0014059","xrefs":{"Monarch":{"xref_id":"0014059"}}}


id: PBO:0002896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan endo-1,3-alpha-glucosidase Agn1","termid":"PBO:0002896"}


id: GO:2000848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of corticosteroid hormone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid hormone secretion","termid":"GO:2000833"},{"relation_name":"is_a","term_name":"regulation of corticosteroid hormone secretion","termid":"GO:2000846"},{"relation_name":"positively_regulates","term_name":"corticosteroid hormone secretion","termid":"GO:0035930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of corticosteroid hormone secretion","synonyms":[{"name":"positive regulation of corticosteroid secretion","type":"related"}],"termid":"GO:2000848"}


id: PBO:0068405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 224","termid":"PBO:0068405"}


id: PBO:0029283
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_mitotic_spindle_pole_body","termid":"PBO:0029283"}


id: PBO:0017960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ornithine transmembrane transporter Ort1 (predicted)","termid":"PBO:0017960"}


id: PBO:0027354
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_pyruvate_decarboxylase_activity_during_stationary_phase","termid":"PBO:0027354"}


id: GO:0070121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the Kupffer's vesicle over time from its initial formation until its mature state. The Kupffer's vesicle is a small but distinctive epithelial sac containing fluid, located midventrally posterior to the yolk cell or its extension, and transiently present during most of the segmentation period.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Kupffer's vesicle development","synonyms":[{"name":"KV development","type":"exact"}],"termid":"GO:0070121"}


id: GO:0070303
data:
  {"annotated_genes":["SJAG_05000","SJAG_01114","SJAG_04825","SJAG_04522","SJAG_03263","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109569,101355,109001,120346,105734,97752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signaling via the stress-activated protein kinase signaling cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stress-activated protein kinase signaling cascade","termid":"GO:0070302"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"stress-activated protein kinase signaling cascade","termid":"GO:0031098"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01114":null,"SJAG_02392":null,"SJAG_03263":null,"SJAG_04522":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of stress-activated protein kinase signaling cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of stress-activated protein kinase signaling pathway","type":"exact"},{"name":"down-regulation of stress-activated protein kinase signaling pathway","type":"exact"},{"name":"downregulation of stress-activated protein kinase signaling pathway","type":"exact"},{"name":"inhibition of stress-activated protein kinase signaling pathway","type":"narrow"},{"name":"negative regulation of SAPK signaling pathway","type":"exact"},{"name":"negative regulation of stress-activated protein kinase signaling pathway","type":"exact"},{"name":"negative regulation of stress-activated protein kinase signalling pathway","type":"exact"}],"termid":"GO:0070303","terms_by_termid":{"GO:1903138":null}}


id: GO:0021572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 6 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:dph","GOC:cls","GOC:curators","GO_REF:0000021","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 6 development","termid":"GO:0021572"}


id: MONDO:0021020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Crigler-Najjar syndrome type 1 (CNS1) is the most severe form of CNS, a hereditary disorder of hepatic bilirubin conjugation, characterized by severe neonatal unconjugated hyperbilirubinemia due to a complete absence of hepatic bilirubin glucuronosyltransferase (BGT).","definition_xrefs":["Orphanet:79234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Crigler-Najjar syndrome","termid":"MONDO:0009044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"Crigler-Najjar syndrome type 1","secondary_identifiers":["icd11.foundation:1098453659","GARD:47","MedDRA:10057034","OMIM:218800","SCTID:8933000","UMLS:C0010324","MEDGEN:41346"],"synonyms":[{"name":"Crigler Najjar syndrome, type 1","type":"related"},{"name":"Crigler-Najjar syndrome, type 1","type":"exact"},{"name":"Crigler-Najjar syndrome, type I","type":"exact"},{"name":"UGT deficiency type 1","type":"exact"},{"name":"bilirubin uridinediphosphate glucuronosyltransferase deficiency type 1","type":"exact"},{"name":"bilirubin-UGT deficiency type 1","type":"exact"},{"name":"hereditary unconjugated hyperbilirubinemia type 1","type":"exact"},{"name":"hyperbilirubinemia, Crigler-Najjar type 1","type":"exact"}],"termid":"MONDO:0021020","xrefs":{"Monarch":{"xref_id":"0021020"}}}


id: FYPO:0005584
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more diglycerides measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular diglyceride level","synonyms":[{"name":"decreased cellular DAG level","type":"exact"},{"name":"decreased cellular diacylglycerol level","type":"exact"},{"name":"decreased cellular diglyceride level during mitotic cell cycle","type":"related"},{"name":"decreased cellular diglyceride level during vegetative growth","type":"exact"},{"name":"decreased diglyceride accumulation","type":"related"},{"name":"reduced cellular diglyceride level","type":"exact"}],"termid":"FYPO:0005584"}


id: GO:0010598
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses NAD(P)H dehydrogenase (plastoquinone) activity. The complex is one of the components of the electron transport chain. It is involved in electron transport from an unidentified electron donor, possibly NADH, NADPH or ferredoxin(Fd) to the plastoquinone pool.","definition_xrefs":["PMID:15608332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"NAD(P)H dehydrogenase complex (plastoquinone)","termid":"GO:0010598"}


id: PBO:0065965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51 associated protein 1","termid":"PBO:0065965"}


id: PBO:0089869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1754 family, human FAM32A homolog, implicated in mRNA splicing","termid":"PBO:0089869"}


id: MONDO:0015424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lethal chondrodysplasia, Moerman type (obsolete MONDO:0015424)","secondary_identifiers":["Orphanet:1420","GARD:3225"],"synonyms":[{"name":"Moerman-Vandenberghe-Fryns syndrome","type":"exact"},{"name":"lethal chondrodysplasia Moerman type","type":"related"}],"termid":"MONDO:0015424","xrefs":{"Monarch":{"xref_id":"0015424"}}}


id: GO:0086051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the Purkinje myocyte membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:dph","GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"},{"relation_name":"part_of","term_name":"Purkinje myocyte action potential","termid":"GO:0086017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"membrane repolarization during Purkinje myocyte action potential","termid":"GO:0086051"}


id: MONDO:0700255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paraneoplastic syndrome that involves the renal system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder","termid":"MONDO:0002118"},{"relation_name":"is_a","term_name":"paraneoplastic syndrome","termid":"MONDO:0021073"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraneoplastic renal syndrome","termid":"MONDO:0700255","xrefs":{"Monarch":{"xref_id":"0700255"}}}


id: GO:1904281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription mediated by RNA polymerase V.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24726328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase V","termid":"GO:1904279"},{"relation_name":"positively_regulates","term_name":"transcription by RNA polymerase V","termid":"GO:0001060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"positive regulation of transcription by RNA polymerase V","synonyms":[{"name":"activation of transcription from RNA pol V promoter","type":"narrow"},{"name":"activation of transcription from RNA polymerase V promoter","type":"narrow"},{"name":"positive regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"up regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"up regulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"up-regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"upregulation of transcription from RNA pol V promoter","type":"exact"},{"name":"upregulation of transcription from RNA polymerase V promoter","type":"exact"}],"termid":"GO:1904281"}


id: PBO:0069809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1095, pseudogene","termid":"PBO:0069809"}


id: MONDO:0007532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Electroencephalographic peculiarity: occipital slow beta waves (obsolete MONDO:0007532)","secondary_identifiers":["OMIM:130400"],"synonyms":[{"name":"Electroencephalographic peculiarity: occipital slow beta waves","type":"exact"}],"termid":"MONDO:0007532","xrefs":{"Monarch":{"xref_id":"0007532"}}}


id: GO:0052570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of reactive oxygen species produced as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete response to defense-related symbiont reactive oxygen species production (obsolete GO:0052570)","synonyms":[{"name":"response to defense-related symbiont reactive oxygen species production","type":"exact"}],"termid":"GO:0052570"}


id: MONDO:0004966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the stomach.","definition_xrefs":["NCIT:C26780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastritis","secondary_identifiers":["DOID:4029","icd11.foundation:1871672644","ICD9:535.0","ICD9:535.00","ICD9:535.01","MESH:D005756","HP:0005263","ICD9:535.41","SCTID:4556007","UMLS:C0017152","MEDGEN:4843","ICD9:535.4","EFO:0000217","ICD9:535.40"],"synonyms":[{"name":"acute gastric mucosal erosion","type":"narrow"},{"name":"erosive gastritis","type":"narrow"},{"name":"erosive gastropathy","type":"narrow"},{"name":"gastritis","type":"exact"},{"name":"gastritis (disease)","type":"exact"},{"name":"inflammation of stomach","type":"exact"},{"name":"stomach inflammation","type":"exact"}],"termid":"MONDO:0004966","xrefs":{"Monarch":{"xref_id":"0004966"}}}


id: PBO:0058529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6074","termid":"PBO:0058529"}


id: PBO:0004063
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"k(cat)/ K(m)m 4.3x10(7) M(-1) min(-1)","termid":"PBO:0004063"}


id: PBO:0089843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane alkaline phosphatase","termid":"PBO:0089843"}


id: PBO:0081210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZKSCAN8 pseudogene 2","termid":"PBO:0081210"}


id: GO:0016541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Intervening protein sequence excised from a protein precursor in protein splicing; inteins catalyze their own excision and many also possess endonuclease activity.","definition_xrefs":["GOC:mah","PMID:8165123"],"gene_count":0,"genotype_count":0,"name":"obsolete intein (obsolete GO:0016541)","synonyms":[{"name":"intein","type":"exact"}],"termid":"GO:0016541"}


id: PBO:0054951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2365","termid":"PBO:0054951"}


id: GO:1904660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sensory perception of bitter taste.","definition_xrefs":["GOC:mr","GO_REF:0000058","PMID:1716172","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sensory perception","termid":"GO:0051931"},{"relation_name":"regulates","term_name":"sensory perception of bitter taste","termid":"GO:0050913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sensory perception of bitter taste","synonyms":[{"name":"regulation of bitter taste perception","type":"exact"}],"termid":"GO:1904660"}


id: PBO:0060373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myozenin 3","termid":"PBO:0060373"}


id: PBO:0018260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyphosphate synthetase, VTC complex subunit Vtc2/3 (predicted)","termid":"PBO:0018260"}


id: PBO:0045948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermal growth factor","termid":"PBO:0045948"}


id: PR:O42699
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1902 gene.","definition_xrefs":["UniProtKB:O42699","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L19-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.14","synonyms":[{"name":"Spom972h-rpl1902","type":"exact"}],"termid":"PR:O42699"}


id: GO:0008092
data:
  {"annotated_genes":["SJAG_01297","SJAG_00970","SJAG_01993","SJAG_04781","SJAG_01665","SJAG_02336","SJAG_00723","SJAG_03119","SJAG_04074","SJAG_04886","SJAG_00332","SJAG_01943","SJAG_00773","SJAG_02040","SJAG_00152","SJAG_04703","SJAG_01598","SJAG_02700","SJAG_02396","SJAG_02245","SJAG_02609","SJAG_01732","SJAG_02566","SJAG_01894","SJAG_03380","SJAG_00677","SJAG_04001","SJAG_01754","SJAG_02431","SJAG_00851","SJAG_03540","SJAG_04841","SJAG_04745","SJAG_02814","SJAG_00279","SJAG_02045","SJAG_00930","SJAG_03703","SJAG_03088","SJAG_04621","SJAG_04982","SJAG_02624","SJAG_01613","SJAG_03455","SJAG_01964","SJAG_04141","SJAG_04624","SJAG_03086","SJAG_03025","SJAG_00042","SJAG_03835","SJAG_03073","SJAG_00521","SJAG_04498","SJAG_01546","SJAG_01268","SJAG_01384","SJAG_00938","SJAG_03229","SJAG_02795","SJAG_01760","SJAG_02075","SJAG_02270","SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71002,67295,64366,70965,71521,63304,72043,61983,72914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003779"},{"annotations":[78090,71932,77315,78253,79528,76658,79575,73219,72867,76125,78431,79196,77800,71865,81978,78509,76712,77341,80768,80925,80896,81366,75134,81539,81817,72138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051015"},{"annotations":[79029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003786"},{"annotations":[77310,73757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003785"},{"annotations":[68692,78514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048487"},{"annotations":[68695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005519"},{"annotations":[63018,70044,77707,75600,78918,59858,64749,59421,65131,80616,75872,62053,78943,78020,67892,70796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008017"},{"annotations":[72911,73341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051011"},{"annotations":[70172,81792,66699,72476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051010"},{"annotations":[73412,81758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032036"}]},"cv_name":"molecular_function","definition":"Binding to a protein component of a cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":64,"genes_by_uniquename":{"SJAG_00042":null,"SJAG_00152":null,"SJAG_00279":null,"SJAG_00332":null,"SJAG_00521":null,"SJAG_00677":null,"SJAG_00723":null,"SJAG_00773":null,"SJAG_00851":null,"SJAG_00930":null,"SJAG_00938":null,"SJAG_00970":null,"SJAG_01268":null,"SJAG_01297":null,"SJAG_01384":null,"SJAG_01546":null,"SJAG_01598":null,"SJAG_01613":null,"SJAG_01665":null,"SJAG_01732":null,"SJAG_01754":null,"SJAG_01760":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01964":null,"SJAG_01993":null,"SJAG_02040":null,"SJAG_02045":null,"SJAG_02075":null,"SJAG_02245":null,"SJAG_02270":null,"SJAG_02336":null,"SJAG_02396":null,"SJAG_02431":null,"SJAG_02566":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02700":null,"SJAG_02795":null,"SJAG_02814":null,"SJAG_03011":null,"SJAG_03025":null,"SJAG_03073":null,"SJAG_03086":null,"SJAG_03088":null,"SJAG_03119":null,"SJAG_03229":null,"SJAG_03380":null,"SJAG_03455":null,"SJAG_03540":null,"SJAG_03703":null,"SJAG_03835":null,"SJAG_04001":null,"SJAG_04074":null,"SJAG_04141":null,"SJAG_04498":null,"SJAG_04621":null,"SJAG_04624":null,"SJAG_04703":null,"SJAG_04745":null,"SJAG_04781":null,"SJAG_04841":null,"SJAG_04886":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"cytoskeletal protein binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000117":null},"termid":"GO:0008092","terms_by_termid":{"GO:0003779":null,"GO:0003785":null,"GO:0003786":null,"GO:0005519":null,"GO:0008017":null,"GO:0032036":null,"GO:0048487":null,"GO:0051010":null,"GO:0051011":null,"GO:0051015":null}}


id: PBO:0012008
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae vht1","termid":"PBO:0012008"}


id: GO:0031587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the activity of the inositol 1,4,5-trisphosphate-sensitive calcium-release channel.","definition_xrefs":["GOC:mah","GOC:signaling","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity","termid":"GO:0031585"},{"relation_name":"is_a","term_name":"positive regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051281"},{"relation_name":"is_a","term_name":"positive regulation of cation channel activity","termid":"GO:2001259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity","synonyms":[{"name":"activation of IP3 receptor activity","type":"narrow"},{"name":"positive regulation of IP3 receptor activity","type":"exact"},{"name":"positive regulation of inositol-1,4,5-trisphosphate receptor activity","type":"exact"},{"name":"stimulation of IP3 receptor activity","type":"narrow"},{"name":"up regulation of IP3 receptor activity","type":"exact"},{"name":"up-regulation of IP3 receptor activity","type":"exact"},{"name":"upregulation of IP3 receptor activity","type":"exact"}],"termid":"GO:0031587"}


id: PATO:0000994
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000994 absolute viscosity (obsolete PATO:0000994)","termid":"PATO:0000994"}


id: PBO:0060694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A3 pseudogene 2","termid":"PBO:0060694"}


id: PBO:0085170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oleate-activated transcription factor; subunit of a heterodimeric complex with Pip2p, which binds to oleate-response elements (ORE) in the promoter of genes involved in beta-oxidation of fatty acids, peroxisome organization and biogenesis, activating transcription in the presence of oleate; regulates chromatin silencing at telomeres; involved in diauxic shift; OAF1 has a paralog, PIP2, that arose from the whole genome duplication","termid":"PBO:0085170"}


id: PBO:0002595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan glucosidase Exg2, unknown specificity","termid":"PBO:0002595"}


id: MONDO:0023007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic disorder, characterized by under-development of bone marrow and neurological disorders such as weakness on one side of the body, agenesis of corpus callosum and hydrocephalus.","definition_xrefs":["PMID:2264478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"bone marrow disorder","termid":"MONDO:0003225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"Drachtman Weinblatt Sitarz syndrome","secondary_identifiers":["MESH:C535603","UMLS:C2930947","GARD:1913","MEDGEN:419292"],"synonyms":[{"name":"Drachtman Weinblatt Sitarz syndrome","type":"exact"},{"name":"marrow hypoplasia associated with congenital neurologic anomalies","type":"related"}],"termid":"MONDO:0023007","xrefs":{"Monarch":{"xref_id":"0023007"}}}


id: PBO:0080402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS33B divergent transcript","termid":"PBO:0080402"}


id: PBO:0062282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily J member 2","termid":"PBO:0062282"}


id: GO:0018603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nitrobenzene + NADH + O2 = NAD+ + nitrite + catechol.","definition_xrefs":["UM-BBD_reactionID:r0306"],"gene_count":0,"genotype_count":0,"name":"obsolete nitrobenzene 1,2-dioxygenase activity (obsolete GO:0018603)","termid":"GO:0018603"}


id: GO:0097708
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id: PR:Q09921
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id: PBO:0042340
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id: PBO:0028409
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id: PBO:0077203
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id: GO:0030280
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id: GO:0047879
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id: PBO:0077950
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id: PBO:0083105
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id: MONDO:0008379
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id: FYPO:0005913
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id: PBO:0070787
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id: MONDO:0100090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital alveolar dysplasia in which the cause of the disease is a mutation in the FGF10 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital alveolar dysplasia","termid":"MONDO:0100077"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital alveolar dysplasia due to FGF10","synonyms":[{"name":"CAD due to FGF10","type":"exact"}],"termid":"MONDO:0100090","xrefs":{"Monarch":{"xref_id":"0100090"}}}


id: FYPO:0008193
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to pericentric heterochromatin is normal during prophase of the first meiotic nuclear division.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to pericentric heterochromatin during meiotic prophase I","termid":"FYPO:0008193"}


id: PBO:0113187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid transport protein; involved in vacuolar protein sorting, protein retention in the Golgi, prospore membrane formation and sporulation; required for mitochondrial integrity and ER packaging into autophagosomes during cortical reticulophagy; peripheral membrane protein found at the prospore membrane and at membrane contact sites; contains a PH-like domain; homologous to human CHAC and COH1, involved in Chorea-acanthocytosis and Cohen syndrome, respectively","termid":"PBO:0113187"}


id: PBO:0080256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 19 pseudogene","termid":"PBO:0080256"}


id: MONDO:0000543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma (disease) that involves the ovary.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metastatic melanoma","termid":"MONDO:0005191"},{"relation_name":"is_a","term_name":"ovarian neoplasm","termid":"MONDO:0021068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian melanoma","secondary_identifiers":["UMLS:C4761026","MEDGEN:1790038","DOID:0050928","NCIT:C178441"],"synonyms":[{"name":"melanoma (disease) of ovary","type":"related"},{"name":"metastatic melanoma of ovary","type":"exact"},{"name":"ovary melanoma (disease)","type":"exact"},{"name":"ovary metastatic melanoma","type":"exact"}],"termid":"MONDO:0000543","xrefs":{"Monarch":{"xref_id":"0000543"}}}


id: GO:0001164
data:
  {"annotated_genes":["SJAG_02813","SJAG_00692"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77496,81026],"is_not":false,"summary":null,"term":"GO:0001164"}]},"cv_name":"molecular_function","definition":"Binding to a regulatory region composed of the transcription start site and binding sites for transcription factors of the RNA polymerase I transcription machinery. This site is often referred to as the CORE element. In mammalian cells, the CORE element functions in conjunction with the Upstream Control Element (UCE), while in fungi, protozoa, and plants, the CORE element functions without a UCE.","definition_xrefs":["PMID:14969726","PMID:8057832","PMID:12865296","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core promoter sequence-specific DNA binding","termid":"GO:0001046"},{"relation_name":"is_a","term_name":"RNA polymerase I transcription regulatory region sequence-specific DNA binding","termid":"GO:0001163"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00692":null,"SJAG_02813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0005488","GO:0000976","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"RNA polymerase I core promoter sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0001187"],"synonyms":[{"name":"RNA polymerase I CORE element sequence-specific DNA binding","type":"exact"},{"name":"RNA polymerase I CORE element sequence-specific DNA binding transcription factor recruiting transcription factor activity","type":"related"},{"name":"transcription factor activity, RNA polymerase I CORE element binding transcription factor recruiting","type":"related"}],"termid":"GO:0001164","terms_by_termid":{"GO:0001164":null}}


id: PBO:0047158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 185 member B, pseudogene","termid":"PBO:0047158"}


id: GO:0015599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + glutamine(out) -> ADP + phosphate + glutamine(in).","definition_xrefs":["RHEA:29895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamine transmembrane transporter activity","termid":"GO:0015186"},{"relation_name":"is_a","term_name":"ATPase-coupled polar amino acid-transporter activity","termid":"GO:0015426"},{"relation_name":"is_a","term_name":"ATPase-coupled carboxylic acid transmembrane transporter activity","termid":"GO:0033284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ATPase-coupled L-glutamine transmembrane transporter activity","secondary_identifiers":["MetaCyc:ABC-12-RXN"],"synonyms":[{"name":"ATPase-coupled glutamine transmembrane transporter activity","type":"broad"},{"name":"glutamine porter activity","type":"broad"},{"name":"glutamine-importing ATPase activity","type":"related"}],"termid":"GO:0015599"}


id: FYPO:0003468
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RNA splicing is normal (i.e. indistinguishable from wild type). All RNA splicing may be normal, or one splicing of or more specific RNA molecules may be specifically assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolism phenotype","termid":"FYPO:0000294"},{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype during vegetative growth","termid":"FYPO:0001347"},{"relation_name":"is_a","term_name":"normal RNA processing","termid":"FYPO:0001980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000294"],"is_obsolete":false,"name":"normal RNA splicing","synonyms":[{"name":"normal RNA splicing during mitotic cell cycle","type":"related"},{"name":"normal RNA splicing during vegetative growth","type":"exact"},{"name":"normal RNA splicing, via transesterification reactions with bulged adenosine as nucleophile","type":"exact"}],"termid":"FYPO:0003468"}


id: FYPO:0001974
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a greater than normal number of cells contain 1C DNA content. This may result from cell cycle arrest or delay.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased number of cells with 1C DNA content","synonyms":[{"name":"increased amount of cells with 1C DNA content","type":"exact"},{"name":"increased number of cells containing 1C DNA","type":"exact"}],"termid":"FYPO:0001974"}


id: FYPO:0006915
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001007"},{"annotations":[121143,121146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000590"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell executes a cell cycle process normally (i.e. indistinguishably from wild type). A cell cycle process is any of the processes that form part of the cell cycle, and thereby ensures successive accurate and complete genome replication and chromosome segregation.","definition_xrefs":["GO:0022402","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle","termid":"FYPO:0003832"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01355":null,"SJAG_04883":null},"genotype_count":3,"genotypes_by_uniquename":{"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cell cycle process","references_by_uniquename":{"PMID:36695178":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_04883","SJAG_00601","SJAG_01355"],"single_locus_genotype_uniquenames":["rip1delta","cox6delta","ptp4delta"],"termid":"FYPO:0006915","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000590":null,"FYPO:0001007":null}}


id: GO:1901504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a triazole into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"triazole transport","termid":"GO:1901504"}


id: MONDO:0018662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachyolmia, recessive type is a form of brachyolmia, a group of rare genetic skeletal disorders, characterized by short-trunked short stature with platyspondyly and scoliosis. Corneal opacities and precocious calcification of the costal cartilage are rare syndromic components. Premature pubarche may occur.","definition_xrefs":["Orphanet:448242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"brachyolmia","termid":"MONDO:0015262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005497"],"is_obsolete":false,"name":"autosomal recessive brachyolmia","secondary_identifiers":["UMLS:C4760908","icd11.foundation:625421044","MEDGEN:1675807","GARD:13171"],"synonyms":[{"name":"brachyolmia, Hobaek/Toledo type","type":"exact"},{"name":"brachyolmia, autosomal recessive","type":"exact"}],"termid":"MONDO:0018662","xrefs":{"Monarch":{"xref_id":"0018662"}}}


id: MONDO:0003459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, polypoid neoplasm that arises from the cervix. It is characterized by the presence of epithelial and mesenchymal elements.","definition_xrefs":["NCIT:C40230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical benign neoplasm","termid":"MONDO:0000644"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical adenofibroma","secondary_identifiers":["DOID:5476","MEDGEN:308942","UMLS:C1516402"],"termid":"MONDO:0003459","xrefs":{"Monarch":{"xref_id":"0003459"}}}


id: PBO:0036205
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9K14_acetylation_during_vegetative_growth","termid":"PBO:0036205"}


id: PBO:0052911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 13-3","termid":"PBO:0052911"}


id: MONDO:0035437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic autoinflammatory syndrome with immune deficiency characterized by a combination of autoinflammation, immunodeficiency, and neutrophil dysfunction, as well as mild bleeding diathesis. Patients present recurrent attacks of abdominal pain, high fever, and systemic inflammation lasting four to five days and occurring every few weeks. Attacks may be accompanied by nailbed, tongue, submandibular, and gluteal abscesses, intra-abdominal granulomas, pyoderma gangrenosum, and buccal ulcerations. Frequent episodes of purulent paronychia, superficial skin and mucosal infections, and purulent upper respiratory tract infections have also been reported.","definition_xrefs":["Orphanet:566067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEBPE-associated autoinflammation-immunodeficiency-neutrophil dysfunction syndrome","secondary_identifiers":["UMLS:C5568564","GARD:22273","ICD10CM:D89.8","MEDGEN:1799987"],"synonyms":[{"name":"CAIN","type":"exact"}],"termid":"MONDO:0035437","xrefs":{"Monarch":{"xref_id":"0035437"}}}


id: SO:0000497
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"9 nucleotide recombination site (e.g. GGTTTTTGT), part of a five_prime_D-recombination signal sequence (SO:0000556) of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"nonamer_of_recombination_feature_of_vertebrate_immune_system_gene","termid":"SO:0000562"},{"relation_name":"part_of","term_name":"five_prime_D_recombination_signal_sequence","termid":"SO:0000556"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_D_nonamer","synonyms":[{"name":"5'D-NONAMER","type":"exact"},{"name":"five prime D nonamer","type":"exact"}],"termid":"SO:0000497"}


id: GO:0071155
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of the guanine nucleotide exchange factor synembrin with the alpha(13) subunit of a heterotrimeric G protein.","definition_xrefs":["PMID:12509430","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"G-protein alpha(13)-synembrin complex","synonyms":[{"name":"Ric-8A G alpha 13 subunit complex","type":"narrow"}],"termid":"GO:0071155"}


id: MOD:00105
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to L-serine amide.","definition_xrefs":["RESID:AA0096","PubMed:743209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-serine amide","synonyms":[{"name":"(2S)-2-amino-3-hydroxypropanamide","type":"exact"},{"name":"L-serine amide","type":"exact"},{"name":"MOD_RES Serine amide","type":"exact"},{"name":"SerN","type":"exact"},{"name":"amidated L-serine","type":"exact"},{"name":"serinamide","type":"exact"}],"termid":"MOD:00105"}


id: GO:0051020
data:
  {"annotated_genes":["SJAG_04703","SJAG_02661","SJAG_01943","SJAG_03470","SJAG_02974","SJAG_04733","SJAG_02833","SJAG_03085","SJAG_00864","SJAG_03002","SJAG_01358","SJAG_03693","SJAG_02012","SJAG_04400","SJAG_00525","SJAG_03959","SJAG_01789","SJAG_00968","SJAG_04366","SJAG_02998","SJAG_00279","SJAG_01909","SJAG_03229","SJAG_03662"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75738],"is_not":false,"summary":null,"term":"GO:0051020"},{"annotations":[65822,68936,70323,63934,61009,70524,64816,61781,72998,68033,61985,65581,73604,75697,79381,79956,57279,62225,76769,59362,75185,59006,65835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031267"}]},"cv_name":"molecular_function","definition":"Binding to a GTPase, any enzyme that catalyzes the hydrolysis of GTP.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00525":null,"SJAG_00864":null,"SJAG_00968":null,"SJAG_01358":null,"SJAG_01789":null,"SJAG_01909":null,"SJAG_01943":null,"SJAG_02012":null,"SJAG_02661":null,"SJAG_02833":null,"SJAG_02974":null,"SJAG_02998":null,"SJAG_03002":null,"SJAG_03085":null,"SJAG_03229":null,"SJAG_03470":null,"SJAG_03662":null,"SJAG_03693":null,"SJAG_03959":null,"SJAG_04366":null,"SJAG_04400":null,"SJAG_04703":null,"SJAG_04733":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"GTPase binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0051020","terms_by_termid":{"GO:0031267":null,"GO:0051020":null}}


id: MONDO:0100431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A migraine disorder characterized by episodes that occur in the absence of preceding focal neurological symptoms.","definition_xrefs":["NCIT:C117004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"migraine disorder","termid":"MONDO:0005277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine without aura","secondary_identifiers":["UMLS:C0338480","SCTID:56097005","MEDGEN:137899","MESH:D020326","icd11.foundation:2048783472","DOID:12783"],"synonyms":[{"name":"common migraine","type":"exact"}],"termid":"MONDO:0100431","xrefs":{"Monarch":{"xref_id":"0100431"}}}


id: GO:1900511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of pentose catabolic process to ethanol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of pentose catabolic process to ethanol (obsolete GO:1900511)","synonyms":[{"name":"activation of pentose catabolic process to ethanol","type":"narrow"},{"name":"activation of pentose catabolism to ethanol","type":"exact"},{"name":"positive regulation of pentose catabolism to ethanol","type":"exact"},{"name":"up regulation of pentose catabolic process to ethanol","type":"exact"},{"name":"up regulation of pentose catabolism to ethanol","type":"exact"},{"name":"up-regulation of pentose catabolic process to ethanol","type":"exact"},{"name":"up-regulation of pentose catabolism to ethanol","type":"exact"},{"name":"upregulation of pentose catabolic process to ethanol","type":"exact"},{"name":"upregulation of pentose catabolism to ethanol","type":"exact"}],"termid":"GO:1900511"}


id: PR:Q09179
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamine synthetase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR20852:SF14","PRO:DNx","OMA:SCHPO00645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine synthetase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.06","secondary_identifiers":["UniProtKB:Q09179"],"synonyms":[{"name":"GS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GLUL","type":"exact"},{"name":"glutamate--ammonia ligase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09179"}


id: GO:0061656
data:
  {"annotated_genes":["SJAG_02082","SJAG_00604"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77447,106420],"is_not":false,"summary":null,"term":"GO:0061656"}]},"cv_name":"molecular_function","definition":"Isoenergetic transfer of SUMO from one protein to another via the reaction X-SUMO + Y = Y-SUMO + X, where both the X-SUMO and Y-SUMO linkages are thioester bonds between the C-terminal amino acid of SUMO and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO transferase activity","termid":"GO:0019789"},{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00604":null,"SJAG_02082":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016740","GO:0016746","GO:0003674","GO:0019787"],"is_obsolete":false,"name":"SUMO conjugating enzyme activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"E2","type":"broad"}],"termid":"GO:0061656","terms_by_termid":{"GO:0061656":null}}


id: GO:0007340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The discharge, by sperm, of a single, anterior secretory granule following the sperm's attachment to the zona pellucida of the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the exocytosis of the acrosomal contents into the zona pellucida.","definition_xrefs":["PMID:11175768","PMID:21042299","GOC:dph","PMID:3886029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acrosome reaction","secondary_identifiers":["Reactome:R-HSA-1300645","Wikipedia:Acrosome_reaction"],"termid":"GO:0007340"}


id: GO:0050949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of late stripe melanocyte differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of melanocyte differentiation","termid":"GO:0045635"},{"relation_name":"is_a","term_name":"regulation of late stripe melanocyte differentiation","termid":"GO:0050940"},{"relation_name":"negatively_regulates","term_name":"late stripe melanocyte differentiation","termid":"GO:0050934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of late stripe melanocyte differentiation","synonyms":[{"name":"down regulation of late stripe melanocyte differentiation","type":"exact"},{"name":"down-regulation of late stripe melanocyte differentiation","type":"exact"},{"name":"downregulation of late stripe melanocyte differentiation","type":"exact"},{"name":"inhibition of late stripe melanocyte differentiation","type":"narrow"},{"name":"negative regulation of late stripe melanophore differentiation","type":"exact"}],"termid":"GO:0050949"}


id: PBO:0065013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRDM16 divergent transcript","termid":"PBO:0065013"}


id: MONDO:0019007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginal atresia","secondary_identifiers":["MEDGEN:232948","MedDRA:10046879","UMLS:C1321884","Orphanet:65681","HP:0000148","icd11.foundation:1126562070","GARD:18867"],"termid":"MONDO:0019007","xrefs":{"Monarch":{"xref_id":"0019007"}}}


id: MOD:01734
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Proteome Sciences TMT6plex-127 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-127 reporter+balance reagent acylated residue","termid":"MOD:01728"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-127 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01734"}


id: PBO:0077728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide repeat containing 18","termid":"PBO:0077728"}


id: PBO:0048076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 27","termid":"PBO:0048076"}


id: MONDO:0017326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare and severe chronic disease characterized by recurrent chronic eczema (with erythematous, scaly and crusted lesions) mainly affecting seborrheic areas (e.g. scalp, forehead, eyelids, paranasal and periauricular skin, neck, axillae, and groin), a generalized fine papular rash, chronic nasal discharge with crusting of the anterior nares, and non-virulent Staphylococcus aureus or beta-hemolytic Streptococcus infections, thought to be a result of HTLV-1-induced immunosuppression. Lymphadenopathy, anemia, mild to moderate pruritus and increased incidence of other infections (e.g. crusted scabies) have also been reported in some patients. Patients may subsequently develop other HTLV-1 associated conditions such as adult T-cell leukemia/lymphoma and tropical spastic paraparesis.","definition_xrefs":["Orphanet:289347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"skin disorder caused by infection","termid":"MONDO:0024294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"infective dermatitis associated with HTLV-1","secondary_identifiers":["MEDGEN:895843","NCIT:C129260","UMLS:C4274291","GARD:21135"],"synonyms":[{"name":"IDH","type":"exact"},{"name":"IDH Gene family","type":"exact"},{"name":"infective dermatitis associated with human T-lymphotropic virus type 1","type":"exact"},{"name":"infective dermatitis associated with human T-lymphotropic virus type I","type":"exact"},{"name":"isocitrate dehydrogenase Gene family","type":"exact"}],"termid":"MONDO:0017326","xrefs":{"Monarch":{"xref_id":"0017326"}}}


id: MONDO:0000681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to recognize or identify objects by touch alone.","definition_xrefs":["DOID:0060151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mental disorder","termid":"MONDO:0005084"},{"relation_name":"is_a","term_name":"agnosia","termid":"MONDO:0005638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tactile agnosia","termid":"MONDO:0000681","xrefs":{"Monarch":{"xref_id":"0000681"}}}


id: SO:0000282
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA with a minus 1 frameshift.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"minus_1_frameshift","termid":"SO:0000866"},{"relation_name":"is_a","term_name":"mRNA_with_frameshift","termid":"SO:0000108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_with_minus_1_frameshift","synonyms":[{"name":"mRNA with minus 1 frameshift","type":"exact"}],"termid":"SO:0000282"}


id: MONDO:0100504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A fungal infectious disease that involves the toenail.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tinea infection","termid":"MONDO:0005982"},{"relation_name":"is_a","term_name":"nail infection","termid":"MONDO:0024487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"fungal infection of the toenail","termid":"MONDO:0100504","xrefs":{"Monarch":{"xref_id":"0100504"}}}


id: MONDO:0013289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal agammaglobulinemia in which the cause of the disease is a mutation in the BLNK gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal agammaglobulinemia","termid":"MONDO:0011096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"agammaglobulinemia 4, autosomal recessive","secondary_identifiers":["MEDGEN:462102","DOID:0060027","UMLS:C3150752","GARD:15674","OMIM:613502"],"synonyms":[{"name":"AGM4","type":"exact"},{"name":"B cell linker protein deficiency","type":"exact"},{"name":"B-cell linker protein deficiency","type":"exact"},{"name":"BLNK autosomal agammaglobulinemia","type":"exact"},{"name":"BLNK deficiency","type":"exact"},{"name":"agammaglobulinemia 4","type":"exact"},{"name":"agammaglobulinemia 4, autosomal recessive","type":"exact"},{"name":"agammaglobulinemia, autosomal recessive, due to Blnk defect","type":"exact"},{"name":"autosomal agammaglobulinemia caused by mutation in BLNK","type":"exact"}],"termid":"MONDO:0013289","xrefs":{"Monarch":{"xref_id":"0013289"}}}


id: PBO:0082541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall protein; YDR134C has a paralog, CCW12, that arose from the whole genome duplication; S. cerevisiae genome reference strain S288C contains an internal in-frame stop at codon 67, which in other strains encodes glutamine","termid":"PBO:0082541"}


id: PATO:0000276
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A reproductive quality inhering in the young of an animal by virtue of their number.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brood quality","termid":"PATO:0001496"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brood size","synonyms":[{"name":"litter size","type":"related"}],"termid":"PATO:0000276"}


id: PBO:0059445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A18","termid":"PBO:0059445"}


id: PBO:0063493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 1 pseudogene 4","termid":"PBO:0063493"}


id: PBO:0039442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKH divergent transcript","termid":"PBO:0039442"}


id: PBO:0039187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 17B, pseudogene","termid":"PBO:0039187"}


id: FYPO:0001708
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of iron-sulfur cluster binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal iron-sulfur cluster binding","synonyms":[{"name":"normal iron-sulphur cluster binding","type":"exact"}],"termid":"FYPO:0001708"}


id: SO:1000074
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant causing a new (functional) splice site.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000074 sequence_variant_causing_cryptic_splice_activation (obsolete SO:1000074)","synonyms":[{"name":"cryptic splice activator sequence variant","type":"exact"},{"name":"mutation causing cryptic splice activator","type":"related"},{"name":"sequence variant causing cryptic splice activator","type":"exact"}],"termid":"SO:1000074"}


id: PBO:0038521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily F member 3","termid":"PBO:0038521"}


id: MONDO:1011645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular arrhythmias and sudden death, non-human animal","secondary_identifiers":["OMIA:001040"],"termid":"MONDO:1011645","xrefs":{"Monarch":{"xref_id":"1011645"}}}


id: PBO:0005266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome maturation factor Ump1 (predicted)","termid":"PBO:0005266"}


id: MONDO:0001774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"scleritis","termid":"MONDO:0001718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"posterior scleritis","secondary_identifiers":["SCTID:267660007","UMLS:C0155357","DOID:13676","icd11.foundation:982348440","ICD9:379.07","MEDGEN:509932"],"termid":"MONDO:0001774","xrefs":{"Monarch":{"xref_id":"0001774"}}}


id: PBO:0073182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein M","termid":"PBO:0073182"}


id: MOD:01578
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ8plex-121 reporter+balance group.","definition_xrefs":["Unimod:731#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","termid":"MOD:01577"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","termid":"MOD:01712"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-121 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01578"}


id: GO:0032238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of adenosine, adenine riboside, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transport","termid":"GO:0015858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"adenosine transport","termid":"GO:0032238"}


id: GO:0005609
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha2, beta2 and gamma1 polypeptide chains.","definition_xrefs":["GOC:jl","PMID:10842354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"laminin-4 complex","synonyms":[{"name":"laminin-221 complex","type":"exact"}],"termid":"GO:0005609"}


id: PBO:0091730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromeric lncRNA nam6","termid":"PBO:0091730"}


id: GO:0097253
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of beta-hydroxybutyrate from one side of a membrane to the other. Beta-hydroxybutyrate is the conjugate base of (R)-3-hydroxybutyric acid.","definition_xrefs":["GOC:dsf","PMID:22302940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid transmembrane transporter activity","termid":"GO:0015245"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"beta-hydroxybutyrate transmembrane transporter activity","synonyms":[{"name":"(R)-3-hydroxybutyrate transmembrane transporter activity","type":"exact"},{"name":"3-hydroxybutanoic acid transmembrane transporter activity","type":"exact"}],"termid":"GO:0097253"}


id: PBO:0041010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blepharophimosis, epicanthus inversus and ptosis candidate 1","termid":"PBO:0041010"}


id: MONDO:0004448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that arises from the ciliated respiratory mucosa that lines the frontal sinus. It results from the invagination and proliferation of epithelial cells in the underlying stroma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inverted papilloma","termid":"MONDO:0002537"},{"relation_name":"is_a","term_name":"frontal sinus Schneiderian papilloma","termid":"MONDO:0003752"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frontal sinus inverted papilloma","secondary_identifiers":["DOID:8060","MEDGEN:272638","NCIT:C6842","UMLS:C1333644"],"synonyms":[{"name":"frontal sinus inverted papilloma","type":"exact"},{"name":"inverted papilloma of frontal sinus","type":"exact"},{"name":"inverted papilloma of the frontal sinus","type":"exact"}],"termid":"MONDO:0004448","xrefs":{"Monarch":{"xref_id":"0004448"}}}


id: MONDO:0002488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant epithelial neoplasm that arises anywhere in the ductal system of the breast. This category includes intraductal papilloma, intraductal papillary carcinoma, ductal hyperplasia with or without atypia, and ductal carcinoma in situ.","definition_xrefs":["NCIT:C36083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast neoplasm","termid":"MONDO:0021100"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraductal breast neoplasm","secondary_identifiers":["DOID:3013","MEDGEN:184927","UMLS:C0948967"],"synonyms":[{"name":"intraductal breast neoplasm","type":"exact"}],"termid":"MONDO:0002488","xrefs":{"Monarch":{"xref_id":"0002488"}}}


id: PBO:0078419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 1-5","termid":"PBO:0078419"}


id: PBO:0080092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 54","termid":"PBO:0080092"}


id: PBO:0011114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin-tyrosine ligase Pby1 (predicted)","termid":"PBO:0011114"}


id: PR:O59705
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cog2 gene.","definition_xrefs":["UniProtKB:O59705","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved oligomeric Golgi complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.08c","synonyms":[{"name":"COG complex subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cog2","type":"exact"},{"name":"component of oligomeric Golgi complex 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59705"}


id: PR:O13773
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ucp7 gene.","definition_xrefs":["UniProtKB:O13773","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain-containing protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.12","synonyms":[{"name":"Spom972h-ucp7","type":"exact"}],"termid":"PR:O13773"}


id: PBO:0050862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of DNA binding 1","termid":"PBO:0050862"}


id: GO:0140488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding specifically to heme to deliver it to a transport vesicle.","definition_xrefs":["PMID:28193844","PMID:32185489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038024"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038024","GO:0003674"],"is_obsolete":false,"name":"heme receptor activity","termid":"GO:0140488"}


id: GO:0046539
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + histamine = N(tau)-methylhistamine + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:19301","EC:2.1.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"histamine N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02155","MetaCyc:HISTAMINE-N-METHYLTRANSFERASE-RXN","Reactome:R-HSA-175993"],"synonyms":[{"name":"S-adenosyl-L-methionine:histamine N-tele-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine-histamine N-methyltransferase activity","type":"related"},{"name":"histamine 1-methyltransferase activity","type":"related"},{"name":"histamine methyltransferase activity","type":"related"},{"name":"histamine-methylating enzyme","type":"related"},{"name":"imidazolemethyltransferase activity","type":"related"}],"termid":"GO:0046539"}


id: MONDO:0031068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease, axonal, IIa 2II","secondary_identifiers":["MEDGEN:1824000","UMLS:C5774227","OMIM:620068"],"synonyms":[{"name":"CMT2II","type":"exact"},{"name":"charcot-marie-tooth disease, axonal, IIa 2II","type":"exact"},{"name":"charcot-marie-tooth neuropathy, IIa 2II","type":"exact"}],"termid":"MONDO:0031068","xrefs":{"Monarch":{"xref_id":"0031068"}}}


id: PBO:0054050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1392","termid":"PBO:0054050"}


id: GO:0034203
data:
  {"annotated_genes":["SJAG_03774","SJAG_02897"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78828,96311],"is_not":false,"summary":null,"term":"GO:0034203"}]},"cv_name":"biological_process","definition":"The translocation, or flipping, of glycolipid molecules from one monolayer of a membrane bilayer to the opposite monolayer.","definition_xrefs":["PMID:11807558","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid translocation","termid":"GO:0034204"},{"relation_name":"is_a","term_name":"glycolipid transport","termid":"GO:0046836"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02897":null,"SJAG_03774":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"glycolipid translocation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0034203","terms_by_termid":{"GO:0034203":null}}


id: MONDO:0019677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly type E (BDE) is a congenital malformation of the digits characterized by variable shortening of the metacarpals with more or less normal length phalanges, although the terminal phalanges are often short.","definition_xrefs":["Orphanet:93387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly type E","secondary_identifiers":["icd11.foundation:712007423","GARD:987","MEDGEN:939359","UMLS:C4315392"],"synonyms":[{"name":"type E brachydactyly","type":"related"}],"termid":"MONDO:0019677","xrefs":{"Monarch":{"xref_id":"0019677"}}}


id: PBO:0004527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear element associated protein Hop1","termid":"PBO:0004527"}


id: PBO:0064730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 66","termid":"PBO:0064730"}


id: PBO:0040906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 10","termid":"PBO:0040906"}


id: PBO:0055564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3000","termid":"PBO:0055564"}


id: GO:0106144
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction fraxetin+ NAD(P)H + 02= sideretin + NAD(P)(+) + H20.","definition_xrefs":["PMID:29581584","RHEA:57844","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"fraxetin 5-hydroxylase activity","secondary_identifiers":["EC:1.14.14.164"],"termid":"GO:0106144"}


id: PBO:0026909
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_sister_chromatid_arm_separation","termid":"PBO:0026909"}


id: GO:0005337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound transmembrane transporter activity","termid":"GO:0015932"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"nucleoside transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-109536","Reactome:R-HSA-727740","Reactome:R-HSA-727767","Reactome:R-HSA-9754929","Reactome:R-HSA-5628807","Reactome:R-HSA-109527","Reactome:R-HSA-109534","Reactome:R-HSA-727749","Reactome:R-HSA-9751024","Reactome:R-HSA-9755015","Reactome:R-HSA-109529","Reactome:R-HSA-9755035","Reactome:R-HSA-727768"],"synonyms":[{"name":"intracellular nucleoside transmembrane transporter activity","type":"narrow"}],"termid":"GO:0005337"}


id: PBO:0016056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuosine salvage protein","termid":"PBO:0016056"}


id: PBO:0072951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase cancer associated transcript 2","termid":"PBO:0072951"}


id: MONDO:0020850
data:
  {"annotated_genes":["SJAG_03635","SJAG_01465","SJAG_03286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88170,88171,88172],"is_not":false,"summary":null,"term":"MONDO:0020850"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01465":null,"SJAG_03286":null,"SJAG_03635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 65","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:22578","DOID:0081226","OMIM:618109","UMLS:C4748219","MEDGEN:1648401"],"synonyms":[{"name":"MRT65","type":"exact"},{"name":"intellectual disability, autosomal recessive 65","type":"exact"},{"name":"mental retardation, autosomal recessive 65","type":"exact"}],"termid":"MONDO:0020850","terms_by_termid":{"MONDO:0020850":null},"xrefs":{"Monarch":{"xref_id":"0020850"}}}


id: PBO:0052677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 45","termid":"PBO:0052677"}


id: GO:0141073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts opsonization by the host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:18941224","PMID:18068388","PMID:28860090","PMID:2307127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defense response","termid":"GO:0052031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host opsonization","synonyms":[{"name":"disruption by symbiont of host opsonization","type":"exact"}],"termid":"GO:0141073"}


id: GO:0010812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of cell-substrate adhesion. Cell-substrate adhesion is the attachment of a cell to the underlying substrate via adhesion molecules.","definition_xrefs":["GOC:tb","GOC:dph","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell adhesion","termid":"GO:0007162"},{"relation_name":"is_a","term_name":"regulation of cell-substrate adhesion","termid":"GO:0010810"},{"relation_name":"negatively_regulates","term_name":"cell-substrate adhesion","termid":"GO:0031589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell-substrate adhesion","termid":"GO:0010812"}


id: PBO:0004156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor, SYF2 family (predicted)","termid":"PBO:0004156"}


id: PR:O14450
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prefoldin subunit 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21431:SF0","OMA:SCHPO01436","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.13","secondary_identifiers":["UniProtKB:O14450"],"synonyms":[{"name":"Spom972h-PFDN6","type":"exact"}],"termid":"PR:O14450"}


id: GO:0030930
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of four identical subunits that possesses ADPG pyrophosphorylase activity. Examples of this component are found in Bacterial species.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADPG pyrophosphorylase complex","termid":"GO:0030929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"homotetrameric ADPG pyrophosphorylase complex","termid":"GO:0030930"}


id: PBO:0087778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit VIa of cytochrome c oxidase; present in a subclass of cytochrome c oxidase complexes that may have a role in mimimizing generation of reactive oxygen species; not essential for cytochrome c oxidase activity but may modulate activity in response to ATP; required for assembly of Rcf2p into cytochrome c oxidase - cytochrome bc1 supercomplexes","termid":"PBO:0087778"}


id: PBO:0086145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for normal mitochondrial morphology; has similarity to hemolysins","termid":"PBO:0086145"}


id: PBO:0051693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80B-WBP1 readthrough (NMD candidate)","termid":"PBO:0051693"}


id: GO:0048491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of synaptic vesicle along axonal microtubules from the presynapse to the cell body.","definition_xrefs":["GOC:lmg","GOC:jid","PMID:24762653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde axonal transport","termid":"GO:0008090"},{"relation_name":"is_a","term_name":"synaptic vesicle transport along microtubule","termid":"GO:0099517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"retrograde synaptic vesicle transport","synonyms":[{"name":"retrograde axonal transport of synaptic vesicle","type":"exact"}],"termid":"GO:0048491"}


id: GO:1990698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a palmitoleoyl group, a 16-carbon monounsaturated fatty acid (C16:1), to an acceptor molecule.","definition_xrefs":["PMID:25731175","PMID:17141155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"palmitoleoyltransferase activity","termid":"GO:1990698"}


id: PBO:0059772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 46","termid":"PBO:0059772"}


id: GO:0033915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->2) and (1->3) linkages in mannan, releasing mannose.","definition_xrefs":["EC:3.2.1.77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidase activity","termid":"GO:0004559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"mannan 1,2-(1,3)-alpha-mannosidase activity","secondary_identifiers":["MetaCyc:3.2.1.77-RXN"],"synonyms":[{"name":"1,2-1,3-alpha-D-mannan mannohydrolase activity","type":"related"},{"name":"exo-1,2-1,3-alpha-mannosidase activity","type":"related"}],"termid":"GO:0033915"}


id: GO:0032796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a uropod, a rigid membrane projection with related cytoskeletal components at the trailing edge of a lymphocyte or other cell in the process of migrating or being activated.","definition_xrefs":["PMID:12787750","GOC:add","PMID:12714569","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uropod organization","synonyms":[{"name":"uropod organisation","type":"exact"},{"name":"uropod organization and biogenesis","type":"related"}],"termid":"GO:0032796"}


id: MOD:00903
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-asparagine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-asparagine residue","synonyms":[{"name":"ModAsn","type":"exact"}],"termid":"MOD:00903"}


id: PBO:0066833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 132","termid":"PBO:0066833"}


id: GO:0006727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ommochromes, any of a large group of natural polycyclic pigments commonly found in the Arthropoda, particularly in the ommatidia of the compound eye.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye pigment biosynthetic process","termid":"GO:0006726"},{"relation_name":"is_a","term_name":"ocellus pigment biosynthetic process","termid":"GO:0008055"},{"relation_name":"is_a","term_name":"ommochrome metabolic process","termid":"GO:0046152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"ommochrome biosynthetic process","synonyms":[{"name":"ommochrome anabolism","type":"exact"},{"name":"ommochrome biosynthesis","type":"exact"},{"name":"ommochrome formation","type":"exact"},{"name":"ommochrome synthesis","type":"exact"}],"termid":"GO:0006727"}


id: PBO:0028123
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lateral_cortical_nodes_absent_from_cell","termid":"PBO:0028123"}


id: MONDO:0968987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare closed lipomatous, dysraphic malformation of the lower spinal cord characterized by extramedullary lipomatous mass attached to the conus region. The conus is dysplastic and poorly delineated. Various morphological subtypes are recognized. Possible symptoms include bowel and bladder dysfunction and neuro-orthopedic deformity of the lower limbs.","definition_xrefs":["Orphanet:645297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conus spinal cord lipoma","termid":"MONDO:0958350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"extramedullary conus spinal cord lipoma","secondary_identifiers":["MEDGEN:1853155","UMLS:C5816726"],"termid":"MONDO:0968987","xrefs":{"Monarch":{"xref_id":"0968987"}}}


id: PBO:0000012
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localization_target","termid":"PBO:0000012"}


id: GO:0004845
data:
  {"annotated_genes":["SJAG_04713","SJAG_03708","SJAG_04709","SJAG_04354"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89316,90314,93856,116922],"is_not":false,"summary":null,"term":"GO:0004845"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + UMP = 5-phospho-alpha-D-ribose 1-diphosphate + uracil.","definition_xrefs":["EC:2.4.2.9","RHEA:13017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"uracil phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:URACIL-PRIBOSYLTRANS-RXN","KEGG_REACTION:R00966"],"synonyms":[{"name":"UMP diphosphorylase activity","type":"related"},{"name":"UMP pyrophosphorylase activity","type":"related"},{"name":"UMP:diphosphate phospho-alpha-D-ribosyltransferase activity","type":"related"},{"name":"UMP:pyrophosphate phosphoribosyltransferase activity","type":"related"},{"name":"UPRTase activity","type":"related"},{"name":"uridine 5'-phosphate pyrophosphorylase activity","type":"related"},{"name":"uridine monophosphate pyrophosphorylase activity","type":"related"},{"name":"uridylate pyrophosphorylase activity","type":"related"},{"name":"uridylic pyrophosphorylase activity","type":"related"}],"termid":"GO:0004845","terms_by_termid":{"GO:0004845":null}}


id: GO:1905831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of spindle assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:27689799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"regulation of spindle assembly","termid":"GO:0090169"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"negatively_regulates","term_name":"spindle assembly","termid":"GO:0051225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0000226"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007010","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"negative regulation of spindle assembly","synonyms":[{"name":"down regulation of bipolar spindle biosynthesis","type":"exact"},{"name":"down regulation of bipolar spindle formation","type":"exact"},{"name":"down regulation of spindle assembly","type":"exact"},{"name":"down regulation of spindle biosynthesis","type":"exact"},{"name":"down regulation of spindle formation","type":"exact"},{"name":"down-regulation of bipolar spindle biosynthesis","type":"exact"},{"name":"down-regulation of bipolar spindle formation","type":"exact"},{"name":"down-regulation of spindle assembly","type":"exact"},{"name":"down-regulation of spindle biosynthesis","type":"exact"},{"name":"down-regulation of spindle formation","type":"exact"},{"name":"downregulation of bipolar spindle biosynthesis","type":"exact"},{"name":"downregulation of bipolar spindle formation","type":"exact"},{"name":"downregulation of spindle assembly","type":"exact"},{"name":"downregulation of spindle biosynthesis","type":"exact"},{"name":"downregulation of spindle formation","type":"exact"},{"name":"inhibition of bipolar spindle biosynthesis","type":"narrow"},{"name":"inhibition of bipolar spindle formation","type":"narrow"},{"name":"inhibition of spindle assembly","type":"narrow"},{"name":"inhibition of spindle biosynthesis","type":"narrow"},{"name":"inhibition of spindle formation","type":"narrow"},{"name":"negative regulation of bipolar spindle biosynthesis","type":"exact"},{"name":"negative regulation of bipolar spindle formation","type":"exact"},{"name":"negative regulation of spindle biosynthesis","type":"exact"},{"name":"negative regulation of spindle formation","type":"exact"}],"termid":"GO:1905831"}


id: MOD:01445
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to L-3,3-dihydroxyoalanine.","definition_xrefs":["PubMed:11435113","RESID:AA0492#SER","PubMed:17558559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"L-3,3-dihydroxyoalanine","termid":"MOD:01448"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3,3-dihydroxyoalanine (Ser)","synonyms":[{"name":"(S)-2-amino-3,3-dihydroxypropanoic acid","type":"exact"},{"name":"2-(dihydroxymethyl)glycine","type":"exact"},{"name":"3,3-dihydroxy-L-alanine","type":"exact"},{"name":"3,3-dihydroxyalanine","type":"exact"},{"name":"3-hydroxy-L-serine","type":"exact"},{"name":"3-oxoalanine hydrate","type":"exact"},{"name":"C(alpha)-formylglycine hydrate","type":"related"}],"termid":"MOD:01445"}


id: PBO:0080769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X inactive specific transcript","termid":"PBO:0080769"}


id: PBO:0036093
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K12_acetylation_during_vegetative_growth","termid":"PBO:0036093"}


id: PBO:0078393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 3-1","termid":"PBO:0078393"}


id: PBO:0090084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox11","termid":"PBO:0090084"}


id: PBO:0117001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IER2 antisense RNA 1","termid":"PBO:0117001"}


id: PBO:0068069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 374","termid":"PBO:0068069"}


id: GO:0051989
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coproporphyrinogen III + 2 S-adenosyl-L-methionine = protoporphyrinogen IX + 2 CO2 + 2 L-methionine + 2 5'-deoxyadenosine.","definition_xrefs":["EC:1.3.98.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"coproporphyrinogen dehydrogenase activity","secondary_identifiers":["MetaCyc:HEMN-RXN","RHEA:15425"],"synonyms":[{"name":"HemN","type":"related"},{"name":"coproporphyrinogen III oxidase activity","type":"related"},{"name":"coproporphyrinogen-III:S-adenosyl-L-methionine oxidoreductase (decarboxylating)","type":"related"},{"name":"oxygen-independent coproporphyrinogen-III oxidase activity","type":"exact"},{"name":"radical SAM enzyme activity","type":"related"}],"termid":"GO:0051989"}


id: PBO:0027506
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-h-_specific_sterility","termid":"PBO:0027506"}


id: GO:0071610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 1 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 1 production","synonyms":[{"name":"CCL1 production","type":"exact"},{"name":"T cell activation 3 production","type":"exact"},{"name":"TCA-3 production","type":"exact"}],"termid":"GO:0071610"}


id: PBO:0084184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone deacetylase, component of both the Rpd3S and Rpd3L complexes; regulates transcription, silencing, autophagy and other processes by influencing chromatin remodeling; forms at least two different complexes which have distinct functions and members; Rpd3(L) recruitment to the subtelomeric region is regulated by interaction with the arginine methyltransferase, Hmt1p","termid":"PBO:0084184"}


id: PBO:0003538
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.2.10","termid":"PBO:0003538"}


id: PBO:0064450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"podocalyxin like 2","termid":"PBO:0064450"}


id: PBO:0040486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 7 like 2","termid":"PBO:0040486"}


id: PBO:0087158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAPII degradation factor; forms a complex with Rad26p in chromatin, enables ubiquitination and proteolysis of RNAPII present in an elongation complex; interacts with general transcription factor TFIIH; mutant is deficient in Zip1p loading onto chromosomes during meiosis","termid":"PBO:0087158"}


id: MONDO:0018432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous mucinosis","termid":"MONDO:0002523"},{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"lichen myxedematosus","secondary_identifiers":["GARD:21709","UMLS:C5848049","MEDGEN:1848864","ICD9:701.8","Orphanet:402007","SCTID:111197009"],"synonyms":[{"name":"lichen myxoedematosus","type":"exact"},{"name":"lichenoid myxedema","type":"related"},{"name":"papular mucinosis","type":"related"}],"termid":"MONDO:0018432","xrefs":{"Monarch":{"xref_id":"0018432"}}}


id: PBO:0027319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_electron_transport,_succinate_to_ubiquinone","termid":"PBO:0027319"}


id: MONDO:0002821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland follicular carcinoma","termid":"MONDO:0005034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"trabecular follicular adenocarcinoma","secondary_identifiers":["UMLS:C0334327","MEDGEN:569646","DOID:3964"],"synonyms":[{"name":"follicular adenocarcinoma, trabecular","type":"exact"},{"name":"follicular adenocarcinoma, trabecular (morphologic abnormality)","type":"exact"},{"name":"trabecular follicular carcinoma","type":"exact"}],"termid":"MONDO:0002821","xrefs":{"Monarch":{"xref_id":"0002821"}}}


id: MONDO:0008148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteogenesis imperfecta type IV is a moderate type of osteogenesis imperfecta (OI), a genetic disorder characterized by increased bone fragility, low bone mass and susceptibility to bone fractures. Patients with type IV have moderately short stature, mild to moderate scoliosis, grayish or white sclera, and dentinogenesis imperfecta (DI).","definition_xrefs":["Orphanet:216820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta type 4","secondary_identifiers":["OMIM:166220","SCTID:205497004","DOID:0110340","GARD:8696","UMLS:C0268363","icd11.foundation:829297901","NCIT:C98576","MESH:C536045","MEDGEN:78665"],"synonyms":[{"name":"OI type 4","type":"exact"},{"name":"OI type IV","type":"related"},{"name":"OI, type 4","type":"related"},{"name":"OI4","type":"exact"},{"name":"common variable OI with normal sclerae","type":"related"},{"name":"osteogenesis imperfecta type IV","type":"exact"},{"name":"osteogenesis imperfecta with normal sclera","type":"exact"},{"name":"osteogenesis imperfecta with normal sclerae","type":"related"},{"name":"osteogenesis imperfecta, type 4","type":"related"},{"name":"osteogenesis imperfecta, type IV","type":"related"}],"termid":"MONDO:0008148","xrefs":{"Monarch":{"xref_id":"0008148"}}}


id: PATO:0000598
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000598 relative width value (obsolete PATO:0000598)","termid":"PATO:0000598"}


id: PBO:0002912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MADS-box transcription factor Map1","termid":"PBO:0002912"}


id: PBO:0040125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 11","termid":"PBO:0040125"}


id: PBO:0050348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 51","termid":"PBO:0050348"}


id: PR:O42947
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16H5.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16H5.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.12c","synonyms":[{"name":"Spom972h-SPBC16H5.12c","type":"exact"}],"termid":"PR:O42947"}


id: GO:0080145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of cysteine within a cell.","definition_xrefs":["PMID:19955263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular amino acid homeostasis","termid":"GO:0080144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular cysteine homeostasis","synonyms":[{"name":"cellular cysteine homeostasis","type":"exact"},{"name":"cysteine homeostasis","type":"exact"}],"termid":"GO:0080145"}


id: PBO:0049459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 2","termid":"PBO:0049459"}


id: MONDO:0002717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spinal cord cancer","termid":"MONDO:0003544"},{"relation_name":"is_a","term_name":"central nervous system teratoma","termid":"MONDO:0002718"},{"relation_name":"is_a","term_name":"benign neoplasm of spinal cord","termid":"MONDO:0021506"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal cord intramedullary teratoma","secondary_identifiers":["MEDGEN:233575","DOID:3639","NCIT:C5428","UMLS:C1334259"],"synonyms":[{"name":"intramedullary spinal cord teratoma","type":"exact"},{"name":"intramedullary spinal teratoma","type":"exact"},{"name":"intramedullary teratoma of spinal cord","type":"exact"},{"name":"intramedullary teratoma of the spinal cord","type":"exact"}],"termid":"MONDO:0002717","xrefs":{"Monarch":{"xref_id":"0002717"}}}


id: PR:Q9P6R2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- leo1 gene.","definition_xrefs":["UniProtKB:Q9P6R2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13E7.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13E7.08c","synonyms":[{"name":"Spom972h-leo1","type":"exact"}],"termid":"PR:Q9P6R2"}


id: MONDO:1011039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any oculocutaneous albinism that occurs in dogs due to a mutation in the SLC45A2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, SLC45A2-related, dog","secondary_identifiers":["OMIA:001821-9615"],"synonyms":[{"name":"coat color albinism, oculocutaneous type IV, dog","type":"related"}],"termid":"MONDO:1011039","xrefs":{"Monarch":{"xref_id":"1011039"}}}


id: GO:0034815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cis-4-(8-hydroxypyren-7-yl)-2-oxobut-3-enoate = 10-oxabenzo(def)chrysen-9-one + formate + H+.","definition_xrefs":["UM-BBD_reactionID:r1135"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-4-(8-hydroxypyren-7-yl)-2-oxobut-3-enoate lyase activity (obsolete GO:0034815)","termid":"GO:0034815"}


id: PBO:0065966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51AP1 pseudogene 1","termid":"PBO:0065966"}


id: PBO:0034084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-expressed_in","termid":"PBO:0034084"}


id: PBO:0078779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 4-1","termid":"PBO:0078779"}


id: GO:1990241
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that interacts selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. An example of this is STING in E. coli (Q86WV6).","definition_xrefs":["GOC:bhm","PMID:23910378"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide binding complex (obsolete GO:1990241)","synonyms":[{"name":"nucleotide binding complex","type":"exact"}],"termid":"GO:1990241"}


id: MONDO:0011932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypotrichosis in which the cause of the disease is a mutation in the DSG4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"},{"relation_name":"is_a","term_name":"hypotrichosis simplex","termid":"MONDO:0018914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis 6","secondary_identifiers":["MEDGEN:335812","UMLS:C1842839","DOID:0110703","OMIM:607903","GARD:15423","MESH:C564312"],"synonyms":[{"name":"DSG4 hypotrichosis","type":"exact"},{"name":"HYPT6","type":"exact"},{"name":"Htl","type":"related"},{"name":"LAH1","type":"exact"},{"name":"Lah1","type":"exact"},{"name":"autosomal recessive localised hypotrichosis","type":"exact"},{"name":"autosomal recessive localized hypotrichosis","type":"exact"},{"name":"hypotrichosis 6","type":"exact"},{"name":"hypotrichosis caused by mutation in DSG4","type":"exact"},{"name":"hypotrichosis type 6","type":"exact"},{"name":"hypotrichosis, localized, autosomal recessive","type":"related"},{"name":"hypotrichosis, localized, autosomal recessive 1","type":"exact"},{"name":"monilethrix-like hypotrichosis","type":"exact"}],"termid":"MONDO:0011932","xrefs":{"Monarch":{"xref_id":"0011932"}}}


id: PBO:0071466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 7","termid":"PBO:0071466"}


id: PBO:0072746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A7 pseudogene 2","termid":"PBO:0072746"}


id: GO:0097239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter in response to a methylglyoxal stimulus.","definition_xrefs":["PMID:15773992","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to methylglyoxal (obsolete GO:0097239)","termid":"GO:0097239"}


id: PBO:0083802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein suggested to function early in the secretory pathway; inviability is suppressed by overexpression of Golgi protein Tvp23p; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and cytosol respectively; ortholog of human Kish","termid":"PBO:0083802"}


id: GO:0070579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methylcytosine (5mC) in DNA + 2-oxoglutarate + O2 = 5-hydroxymethylcytosine (5hmC) in DNA + succinate + CO2. This reaction is the first step in the removal of cytosine methylated on position 5 in double-stranded DNA. This activity can iteratively oxidize 5hmC to 5-formylcytosine (5fC) and to 5-carboxylcytosine (5caC).","definition_xrefs":["EC:1.14.11.80","PMID:19372391","PMID:21778364","PMID:21496894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0016491","GO:0140097","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"DNA 5-methylcytosine dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-5220952","Reactome:R-HSA-5220990","Reactome:R-HSA-5221014","Reactome:R-HSA-9817458","WIkipedia:DNA_demethylation"],"synonyms":[{"name":"methylcytosine dioxygenase activity","type":"broad"}],"termid":"GO:0070579"}


id: GO:0071447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydroperoxide stimulus. Hydroperoxides are monosubstitution products of hydrogen peroxide, HOOH.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hydroperoxide","termid":"GO:0033194"},{"relation_name":"is_a","term_name":"cellular response to oxidative stress","termid":"GO:0034599"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hydroperoxide","termid":"GO:0071447"}


id: PBO:0005628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATP-Mg/Pi carrier (predicted)","termid":"PBO:0005628"}


id: PBO:0038805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 9","termid":"PBO:0038805"}


id: PBO:0068080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 386","termid":"PBO:0068080"}


id: GO:0061631
data:
  {"annotated_genes":["SJAG_00300","SJAG_04612","SJAG_05022","SJAG_04573","SJAG_00855","SJAG_00931","SJAG_00208","SJAG_01679","SJAG_00293","SJAG_04857","SJAG_02918","SJAG_05340"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66387,73072,75180,76119,79303,79787,89654,89871,90031,104196,116273,118794],"is_not":false,"summary":null,"term":"GO:0061631"}]},"cv_name":"molecular_function","definition":"Isoenergetic transfer of ubiquitin from one protein to another via the reaction X-ubiquitin + Y = Y-ubiquitin + X, where both the X-ubiquitin and Y-ubiquitin linkages are thioester bonds between the C-terminal glycine of ubiquitin and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:BioGRID","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-protein transferase activity","termid":"GO:0004842"},{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00293":null,"SJAG_00300":null,"SJAG_00855":null,"SJAG_00931":null,"SJAG_01679":null,"SJAG_02918":null,"SJAG_04573":null,"SJAG_04612":null,"SJAG_04857":null,"SJAG_05022":null,"SJAG_05340":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0016746","GO:0003674","GO:0003824","GO:0004842","GO:0019787","GO:0016740"],"is_obsolete":false,"name":"ubiquitin conjugating enzyme activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:2.3.2.23"],"synonyms":[{"name":"E2","type":"broad"},{"name":"HECT E3","type":"related"}],"termid":"GO:0061631","terms_by_termid":{"GO:0061631":null}}


id: GO:0007034
data:
  {"annotated_genes":["SJAG_01913","SJAG_01645","SJAG_03783","SJAG_02453","SJAG_01527","SJAG_01324","SJAG_00204","SJAG_05207","SJAG_03442","SJAG_02811","SJAG_03976","SJAG_04931","SJAG_01229","SJAG_04552","SJAG_01809","SJAG_04643","SJAG_01876","SJAG_03970","SJAG_00108","SJAG_03250","SJAG_04902","SJAG_02912","SJAG_03963","SJAG_05245","SJAG_02049","SJAG_00821","SJAG_04912","SJAG_01080","SJAG_00416","SJAG_01586","SJAG_02117","SJAG_02349","SJAG_01488","SJAG_00916","SJAG_02315","SJAG_03962","SJAG_05210","SJAG_03005","SJAG_05303","SJAG_00208","SJAG_16459","SJAG_04070","SJAG_03403","SJAG_02240","SJAG_03726","SJAG_01360","SJAG_01088","SJAG_01598","SJAG_03347","SJAG_04966","SJAG_04047","SJAG_03860","SJAG_04489","SJAG_03848","SJAG_00301","SJAG_00181","SJAG_04936","SJAG_04349","SJAG_02371","SJAG_00777","SJAG_00299","SJAG_02587","SJAG_00900","SJAG_01445","SJAG_04822","SJAG_03511","SJAG_01981","SJAG_04024","SJAG_00380","SJAG_03385","SJAG_03892","SJAG_02234","SJAG_01242","SJAG_03072","SJAG_02584","SJAG_01281","SJAG_07012","SJAG_04600","SJAG_03137","SJAG_04023","SJAG_01367","SJAG_03756"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72650,73696,79231,90974,97733,116515],"is_not":false,"summary":null,"term":"GO:0007034"},{"annotations":[116448,69292,115300,64888,65831,70924,107706,64473,89983,93382,89867,93521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120113"},{"annotations":[79403,81419,92449,79947,96072,99055,101836,112241,101430,75285,77887,103383,77941,110768,79518,119561,98036,98790,113485,71712,79492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006896"},{"annotations":[102179,78548,75755,103912,109585,102237,111783,112873,92050,79064,120462,103047,110962,107663,118906,77507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045324"},{"annotations":[72462,105079,100599,109086,77756,100781,81028,106057,77077,112184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032511"},{"annotations":[92877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044395"},{"annotations":[74505,79063,79490,72992,82167,79946,77505,78962,75753,98463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006623"},{"annotations":[97866,75262,73885,79982,108519,80253,72680,93385,72850,89814,102816,116709,99872,75283,89986,93524,111350,79516,73921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043328"}]},"cv_name":"biological_process","definition":"The directed movement of substances into, out of or within a vacuole.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":82,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00181":null,"SJAG_00204":null,"SJAG_00208":null,"SJAG_00299":null,"SJAG_00301":null,"SJAG_00380":null,"SJAG_00416":null,"SJAG_00777":null,"SJAG_00821":null,"SJAG_00900":null,"SJAG_00916":null,"SJAG_01080":null,"SJAG_01088":null,"SJAG_01229":null,"SJAG_01242":null,"SJAG_01281":null,"SJAG_01324":null,"SJAG_01360":null,"SJAG_01367":null,"SJAG_01445":null,"SJAG_01488":null,"SJAG_01527":null,"SJAG_01586":null,"SJAG_01598":null,"SJAG_01645":null,"SJAG_01809":null,"SJAG_01876":null,"SJAG_01913":null,"SJAG_01981":null,"SJAG_02049":null,"SJAG_02117":null,"SJAG_02234":null,"SJAG_02240":null,"SJAG_02315":null,"SJAG_02349":null,"SJAG_02371":null,"SJAG_02453":null,"SJAG_02584":null,"SJAG_02587":null,"SJAG_02811":null,"SJAG_02912":null,"SJAG_03005":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03250":null,"SJAG_03347":null,"SJAG_03385":null,"SJAG_03403":null,"SJAG_03442":null,"SJAG_03511":null,"SJAG_03726":null,"SJAG_03756":null,"SJAG_03783":null,"SJAG_03848":null,"SJAG_03860":null,"SJAG_03892":null,"SJAG_03962":null,"SJAG_03963":null,"SJAG_03970":null,"SJAG_03976":null,"SJAG_04023":null,"SJAG_04024":null,"SJAG_04047":null,"SJAG_04070":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04552":null,"SJAG_04600":null,"SJAG_04643":null,"SJAG_04822":null,"SJAG_04902":null,"SJAG_04912":null,"SJAG_04931":null,"SJAG_04936":null,"SJAG_04966":null,"SJAG_05207":null,"SJAG_05210":null,"SJAG_05245":null,"SJAG_05303":null,"SJAG_07012":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"vacuolar transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0007034","terms_by_termid":{"GO:0006623":null,"GO:0006896":null,"GO:0007034":null,"GO:0032511":null,"GO:0043328":null,"GO:0044395":null,"GO:0045324":null,"GO:0120113":null}}


id: GO:0031918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that increases synaptic metaplasticity. Metaplasticity is a higher-order form of plasticity and is manifest as a change in the ability to induce subsequent synaptic plasticity that is the ability of synapses to change as circumstances require.","definition_xrefs":["PMID:8658594","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic plasticity","termid":"GO:0031915"},{"relation_name":"is_a","term_name":"regulation of synaptic metaplasticity","termid":"GO:0031916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of synaptic metaplasticity","synonyms":[{"name":"activation of synaptic metaplasticity","type":"narrow"},{"name":"stimulation of synaptic metaplasticity","type":"narrow"},{"name":"up regulation of synaptic metaplasticity","type":"exact"},{"name":"up-regulation of synaptic metaplasticity","type":"exact"},{"name":"upregulation of synaptic metaplasticity","type":"exact"}],"termid":"GO:0031918"}


id: PBO:0070119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 33 pseudogene","termid":"PBO:0070119"}


id: PBO:0055384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2814","termid":"PBO:0055384"}


id: PBO:0071836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 31","termid":"PBO:0071836"}


id: GO:1900234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Kit signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"Kit signaling pathway","termid":"GO:0038109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Kit signaling pathway","synonyms":[{"name":"regulation of Kit signalling pathway","type":"exact"},{"name":"regulation of stem cell factor receptor signaling pathway","type":"exact"},{"name":"regulation of stem cell factor signaling pathway","type":"exact"}],"termid":"GO:1900234"}


id: PBO:0049248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRPEL2 pseudogene 2","termid":"PBO:0049248"}


id: GO:0086012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization during action potential","termid":"GO:0086010"},{"relation_name":"part_of","term_name":"cardiac muscle cell action potential","termid":"GO:0086001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"}


id: GO:1990816
data:
  {"annotated_genes":["SJAG_02578","SJAG_05184"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92088,96200],"is_not":false,"summary":null,"term":"GO:1990816"}]},"cv_name":"cellular_component","definition":"A zone of apposition between the vacuolar membrane and the mitochondrial outer membrane, important for transfer of lipids between the two organelles.","definition_xrefs":["PMID:25026036","PMID:25026035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02578":null,"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"vacuole-mitochondrion membrane contact site","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vCLAMP","type":"exact"},{"name":"vacuole and mitochondria patch","type":"exact"}],"termid":"GO:1990816","terms_by_termid":{"GO:1990816":null}}


id: MONDO:0009630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, isolated, with coloboma","termid":"MONDO:0000170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, isolated, with coloboma 4","secondary_identifiers":["MEDGEN:344410","MESH:C565378","OMIM:251505","SCTID:715771008","UMLS:C1855053","GARD:15200"],"synonyms":[{"name":"MCOPCB4","type":"related"},{"name":"microphthalmia with colobomatous cyst","type":"related"},{"name":"microphthalmia, isolated, with coloboma 4","type":"exact"},{"name":"microphthalmia, isolated, with coloboma type 4","type":"exact"}],"termid":"MONDO:0009630","xrefs":{"Monarch":{"xref_id":"0009630"}}}


id: GO:0141085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an inflammasome-mediated signaling pathway.","definition_xrefs":["PMID:33467177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"inflammasome-mediated signaling pathway","termid":"GO:0141084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of inflammasome-mediated signaling pathway","synonyms":[{"name":"regulation of inflammasome-mediated signal transduction","type":"exact"}],"termid":"GO:0141085"}


id: GO:0047864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N,N-dimethylaniline N-oxide = N-methylaniline + formaldehyde.","definition_xrefs":["RHEA:19321","EC:4.1.2.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"dimethylaniline-N-oxide aldolase activity","secondary_identifiers":["KEGG_REACTION:R03345","MetaCyc:DIMETHYLANILINE-N-OXIDE-ALDOLASE-RXN"],"synonyms":[{"name":"N,N-dimethylaniline-N-oxide formaldehyde-lyase (N-methylaniline-forming)","type":"related"},{"name":"N,N-dimethylaniline-N-oxide formaldehyde-lyase activity","type":"related"},{"name":"microsomal N-oxide dealkylase activity","type":"related"},{"name":"microsomal oxidase II","type":"related"}],"termid":"GO:0047864"}


id: PBO:0075744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 68 pseudogene 3","termid":"PBO:0075744"}


id: GO:0106226
data:
  {"annotated_genes":["SJAG_02990"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100884],"is_not":false,"summary":null,"term":"GO:0106226"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxyisobutyryl-CoA + lysine in peptide = CoA + N-2-hydroxyisobutyryl-lysine-peptide.","definition_xrefs":["PMID:29775581","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"peptide 2-hydroxyisobutyryltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:24180"],"termid":"GO:0106226","terms_by_termid":{"GO:0106226":null}}


id: MONDO:0000444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ARC syndrome (obsolete MONDO:0000444)","synonyms":[{"name":"pericyte cell syndromic disease","type":"exact"}],"termid":"MONDO:0000444","xrefs":{"Monarch":{"xref_id":"0000444"}}}


id: MONDO:0004244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelioid sarcoma predominantly involving the pelvis, perineum, and genital organs. It tends to have a more aggressive clinical course as compared to the more frequently seen distal-type epithelioid sarcoma.","definition_xrefs":["NCIT:C27472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelioid sarcoma","termid":"MONDO:0017387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"proximal-type epithelioid sarcoma","secondary_identifiers":["MEDGEN:235511","DOID:7492","ONCOTREE:PTES","UMLS:C1335563"],"synonyms":[{"name":"PTES","type":"related"},{"name":"central epithelioid sarcoma","type":"exact"},{"name":"proximal-type epithelioid sarcoma","type":"exact"}],"termid":"MONDO:0004244","xrefs":{"Monarch":{"xref_id":"0004244"}}}


id: PBO:0114290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OCIA domain-containing protein, involved in endocytosis pathway","termid":"PBO:0114290"}


id: GO:0098905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a cardiac muscle cell of the bundle of His. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell action potential","termid":"GO:0098901"},{"relation_name":"regulates","term_name":"bundle of His cell action potential","termid":"GO:0086043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of bundle of His cell action potential","synonyms":[{"name":"regulation of bundle of His cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0098905"}


id: MONDO:0004318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive small cell neuroendocrine carcinoma that arises from the ovary. Morphologically, it resembles the small cell carcinoma that arises from the lung.","definition_xrefs":["NCIT:C40440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian small cell carcinoma","termid":"MONDO:0003795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pulmonary type ovarian small cell carcinoma","secondary_identifiers":["UMLS:C1518737","DOID:7650","MEDGEN:309517"],"synonyms":[{"name":"ovarian small cell carcinoma, pulmonary type","type":"exact"}],"termid":"MONDO:0004318","xrefs":{"Monarch":{"xref_id":"0004318"}}}


id: MONDO:1011686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contact activation defect, non-human animal","secondary_identifiers":["OMIA:000225"],"termid":"MONDO:1011686","xrefs":{"Monarch":{"xref_id":"1011686"}}}


id: PBO:0050878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDI1 pseudogene 1","termid":"PBO:0050878"}


id: GO:1903384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a hydrogen peroxide-induced neuron intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:PARL","GOC:bf","GOC:TermGenie","PMID:23261939","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway","termid":"GO:1903377"},{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide-induced neuron intrinsic apoptotic signaling pathway","termid":"GO:1903383"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","termid":"GO:1903751"},{"relation_name":"negatively_regulates","term_name":"neuron intrinsic apoptotic signaling pathway in response to hydrogen peroxide","termid":"GO:0036482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of hydrogen peroxide-induced neuron intrinsic apoptotic signaling pathway","synonyms":[{"name":"down regulation of H2O2-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"down regulation of neuron apoptosis in response to hydrogen peroxide","type":"related"},{"name":"down regulation of neuron intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"down regulation of neuron intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"},{"name":"down-regulation of H2O2-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"down-regulation of neuron apoptosis in response to hydrogen peroxide","type":"related"},{"name":"down-regulation of neuron intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"down-regulation of neuron intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"},{"name":"downregulation of H2O2-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"downregulation of neuron apoptosis in response to hydrogen peroxide","type":"related"},{"name":"downregulation of neuron intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"downregulation of neuron intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"},{"name":"inhibition of H2O2-induced neuron intrinsic apoptotic signaling pathway","type":"narrow"},{"name":"inhibition of neuron apoptosis in response to hydrogen peroxide","type":"related"},{"name":"inhibition of neuron intrinsic apoptotic signaling pathway in response to H2O2","type":"narrow"},{"name":"inhibition of neuron intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"narrow"},{"name":"negative regulation of H2O2-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"negative regulation of neuron apoptosis in response to hydrogen peroxide","type":"related"},{"name":"negative regulation of neuron intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"negative regulation of neuron intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"},{"name":"protection against H2O2-induced neuron apoptosis","type":"related"},{"name":"protection against hydrogen peroxide-induced neuron apoptosis","type":"related"}],"termid":"GO:1903384"}


id: PBO:0040675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAR1 scaffold protein, Cas family member","termid":"PBO:0040675"}


id: PBO:0089889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoside-triphosphate reductase, anaerobic","termid":"PBO:0089889"}


id: PBO:0067003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 7, pseudogene","termid":"PBO:0067003"}


id: GO:0070927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops or reduces the activity of an ATP:ADP antiporter.","definition_xrefs":["GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of ATP:ADP antiporter activity (obsolete GO:0070927)","synonyms":[{"name":"down regulation of ATP:ADP antiporter activity","type":"exact"},{"name":"down-regulation of ATP:ADP antiporter activity","type":"exact"},{"name":"downregulation of ATP:ADP antiporter activity","type":"exact"},{"name":"inhibition of ATP:ADP antiporter activity","type":"narrow"}],"termid":"GO:0070927"}


id: PBO:0004816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-like protein Arp10 (predicted)","termid":"PBO:0004816"}


id: PBO:0043548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type II alpha 1 chain","termid":"PBO:0043548"}


id: GO:0072593
data:
  {"annotated_genes":["SJAG_01199","SJAG_05181","SJAG_01216","SJAG_03166","SJAG_04788","SJAG_01734","SJAG_04823","SJAG_04632","SJAG_00668","SJAG_00141","SJAG_03303","SJAG_04399","SJAG_02515","SJAG_04953","SJAG_04403","SJAG_03653"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110806,120320,106996,101922,119379,97098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061692"},{"annotations":[97100,72005,101924,110807,106997,77617,72765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042744"},{"annotations":[61559,91273,75975,95018,70435,66220,58381,101189,90848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a reactive oxygen species, any molecules or ions formed by the incomplete one-electron reduction of oxygen. They contribute to the microbicidal activity of phagocytes, regulation of signal transduction and gene expression, and the oxidative damage to biopolymers.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00668":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01734":null,"SJAG_02515":null,"SJAG_03166":null,"SJAG_03303":null,"SJAG_03653":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reactive oxygen species metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"ROS metabolic process","type":"exact"},{"name":"reactive oxygen species metabolism","type":"exact"}],"termid":"GO:0072593","terms_by_termid":{"GO:0019430":null,"GO:0042744":null,"GO:0061692":null}}


id: MONDO:0021543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma that involves the gingiva.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"},{"relation_name":"is_a","term_name":"benign neoplasm of gum","termid":"MONDO:0021491"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangioma of gingiva","secondary_identifiers":["NCIT:C4831","UMLS:C0582885","SCTID:304990002","MEDGEN:108426","ICD9:228.09"],"synonyms":[{"name":"angioma of gingiva","type":"exact"},{"name":"angioma of gum","type":"exact"},{"name":"angioma of the gingiva","type":"exact"},{"name":"angioma of the gum","type":"exact"},{"name":"gingiva hemangioma","type":"exact"},{"name":"gingival angioma","type":"exact"},{"name":"gingival hemangioma","type":"exact"},{"name":"gum angioma","type":"exact"},{"name":"gum hemangioma","type":"exact"},{"name":"hemangioma of gum","type":"exact"},{"name":"hemangioma of the gingiva","type":"exact"},{"name":"hemangioma of the gum","type":"exact"}],"termid":"MONDO:0021543","xrefs":{"Monarch":{"xref_id":"0021543"}}}


id: PBO:0027502
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_MTT","termid":"PBO:0027502"}


id: MONDO:0017476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upper limb hypertrophy","secondary_identifiers":["Orphanet:295049","GARD:21212","icd11.foundation:663591902","UMLS:C0575518","MEDGEN:488921"],"termid":"MONDO:0017476","xrefs":{"Monarch":{"xref_id":"0017476"}}}


id: GO:1901484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of transcription factor catabolic process.","definition_xrefs":["GOC:vw","GOC:TermGenie","GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription factor catabolic process (obsolete GO:1901484)","synonyms":[{"name":"down regulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"down regulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"down regulation of transcription factor breakdown","type":"exact"},{"name":"down regulation of transcription factor catabolic process","type":"exact"},{"name":"down regulation of transcription factor catabolism","type":"exact"},{"name":"down regulation of transcription factor degradation","type":"exact"},{"name":"down-regulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"down-regulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"down-regulation of transcription factor breakdown","type":"exact"},{"name":"down-regulation of transcription factor catabolic process","type":"exact"},{"name":"down-regulation of transcription factor catabolism","type":"exact"},{"name":"down-regulation of transcription factor degradation","type":"exact"},{"name":"downregulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"downregulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"downregulation of transcription factor breakdown","type":"exact"},{"name":"downregulation of transcription factor catabolic process","type":"exact"},{"name":"downregulation of transcription factor catabolism","type":"exact"},{"name":"downregulation of transcription factor degradation","type":"exact"},{"name":"inhibition of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"inhibition of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"inhibition of transcription factor breakdown","type":"exact"},{"name":"inhibition of transcription factor catabolic process","type":"narrow"},{"name":"inhibition of transcription factor catabolism","type":"exact"},{"name":"inhibition of transcription factor degradation","type":"exact"},{"name":"negative regulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"negative regulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"negative regulation of transcription factor breakdown","type":"exact"},{"name":"negative regulation of transcription factor catabolism","type":"exact"},{"name":"negative regulation of transcription factor degradation","type":"exact"}],"termid":"GO:1901484"}


id: PBO:0060118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 19","termid":"PBO:0060118"}


id: GO:0007532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mating-type specific process that modulates the frequency, rate or extent of cellular DNA-templated transcription.","definition_xrefs":["GOC:txnOH","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"is_a","term_name":"mating type determination","termid":"GO:0007531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006355","GO:0006351"],"is_obsolete":false,"name":"regulation of mating-type specific transcription, DNA-templated","synonyms":[{"name":"mating-type specific transcriptional control","type":"exact"},{"name":"regulation of mating-type specific transcription, DNA-dependent","type":"exact"}],"termid":"GO:0007532"}


id: MONDO:0014107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the FLRT3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kallmann syndrome","termid":"MONDO:0018800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 21 with or without anosmia","secondary_identifiers":["MEDGEN:815316","GARD:15933","OMIM:615271","UMLS:C3808986","DOID:0090093","ICD10CM:E23.0"],"synonyms":[{"name":"FLRT3 hypogonadotropic hypogonadism","type":"exact"},{"name":"HH21","type":"related"},{"name":"hypogonadotropic hypogonadism 21 with anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism 21 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in FLRT3","type":"exact"}],"termid":"MONDO:0014107","xrefs":{"Monarch":{"xref_id":"0014107"}}}


id: MONDO:1010141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ectodermal dysplasia/skin fragility syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"},{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex, non-human animal","termid":"MONDO:1011428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectodermal dysplasia/skin fragility syndrome, non-human animal","secondary_identifiers":["OMIA:001864"],"termid":"MONDO:1010141","xrefs":{"Monarch":{"xref_id":"1010141"}}}


id: GO:0050638
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + taxa-4(20),11-dien-5alpha-ol = CoA + taxa-4(20),11-dien-5alpha-yl acetate.","definition_xrefs":["EC:2.3.1.162","RHEA:22028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"taxadien-5-alpha-ol O-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R06307","MetaCyc:2.3.1.162-RXN"],"synonyms":[{"name":"acetyl coenzyme A: taxa-4(20),11(12)-dien-5alpha-ol O-acetyl transferase activity","type":"related"},{"name":"acetyl coenzyme A:taxa-4(20),11(12)-dien-5-alpha-ol O-acetyl transferase activity","type":"related"},{"name":"acetyl-CoA:taxa-4(20),11-dien-5alpha-ol O-acetyltransferase activity","type":"related"},{"name":"taxa-4(20),11(12)-dien-5alpha-ol-O-acetyltransferase activity","type":"related"},{"name":"taxadien-5a-ol O-acetyltransferase activity","type":"exact"},{"name":"taxadien-5alpha-ol O-acetyltransferase activity","type":"related"},{"name":"taxadienol acetyltransferase activity","type":"related"}],"termid":"GO:0050638"}


id: GO:0106034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of an assembled [2Fe-2S] cluster from a scaffold protein to an acceptor protein that contributes to the attainment of the full functional capacity of a protein.","definition_xrefs":["PMID:23615440"],"gene_count":0,"genotype_count":0,"name":"obsolete protein maturation by [2Fe-2S] cluster transfer (obsolete GO:0106034)","termid":"GO:0106034"}


id: MONDO:0025513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune form of urticaria (disease).","definition_xrefs":["MONDO:patterns/autoimmune"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urticaria","termid":"MONDO:0005492"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"autoimmune urticaria","secondary_identifiers":["MEDGEN:725554","SCTID:402397006","ICD9:708.8","UMLS:C1304191"],"synonyms":[{"name":"autoimmune urticaria","type":"exact"},{"name":"autoimmune urticaria (disease)","type":"exact"}],"termid":"MONDO:0025513","xrefs":{"Monarch":{"xref_id":"0025513"}}}


id: GO:0010499
data:
  {"annotated_genes":["SJAG_05252","SJAG_02625","SJAG_00591","SJAG_00837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72585,77064,78708,80843],"is_not":false,"summary":null,"term":"GO:0010499"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds that is mediated by the proteasome but do not involve ubiquitin.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasomal protein catabolic process","termid":"GO:0010498"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00591":null,"SJAG_00837":null,"SJAG_02625":null,"SJAG_05252":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"proteasomal ubiquitin-independent protein catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0010499","terms_by_termid":{"GO:0010499":null}}


id: GO:0015389
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: (pyrimidine nucleoside or adenosine)(out) + Na+(out) = (pyrimidine nucleoside or adenosine)(in) + Na+(in).","definition_xrefs":["TC:2.A.41.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase transmembrane transporter activity","termid":"GO:0005345"},{"relation_name":"is_a","term_name":"pyrimidine nucleobase transmembrane transporter activity","termid":"GO:0005350"},{"relation_name":"is_a","term_name":"nucleoside:sodium symporter activity","termid":"GO:0005415"},{"relation_name":"is_a","term_name":"nucleobase:monoatomic cation symporter activity","termid":"GO:0015391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"pyrimidine- and adenosine-specific:sodium symporter activity","synonyms":[{"name":"pyrimidine- and adenine-specific:sodium symporter activity","type":"related"}],"termid":"GO:0015389"}


id: SO:0001560
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes the inactivation of a ligand binding site with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_loss_of_function_variant","termid":"SO:0001559"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inactive_ligand_binding_site","synonyms":[{"name":"inactive ligand binding site","type":"exact"}],"termid":"SO:0001560"}


id: FYPO:0000518
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear transport","termid":"FYPO:0005573"},{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nuclear transport during vegetative growth","synonyms":[{"name":"abnormal nuclear transport during mitotic cell cycle","type":"related"},{"name":"nuclear transport: abnormal during vegetative growth","type":"related"}],"termid":"FYPO:0000518"}


id: GO:0051266
data:
  {"annotated_genes":["SJAG_01786"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99714],"is_not":false,"summary":null,"term":"GO:0051266"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: siroheme + 2 H+ = Fe(2+) + sirohydrochlorin.","definition_xrefs":["RHEA:24360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferrochelatase activity","termid":"GO:0004325"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01786":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"sirohydrochlorin ferrochelatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:4.99.1.4","KEGG_REACTION:R02864","MetaCyc:SIROHEME-FERROCHELAT-RXN"],"synonyms":[{"name":"siroheme ferro-lyase (sirohydrochlorin-forming)","type":"related"},{"name":"siroheme synthase activity","type":"broad"},{"name":"sirohydrochlorin ferro-lyase activity","type":"exact"}],"termid":"GO:0051266","terms_by_termid":{"GO:0051266":null}}


id: PATO:0001499
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spheroid quality inhering in a bearer by virtue of the bearer's resembling a ball (a sphere whose equatorial diameter is equal to the polar diameter).","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"has_cross_section","term_name":"circular","termid":"PATO:0000411"},{"relation_name":"is_a","term_name":"spheroid","termid":"PATO:0001865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spherical","secondary_identifiers":["PATO:0000408"],"synonyms":[{"name":"globular","type":"exact"},{"name":"rotund","type":"related"}],"termid":"PATO:0001499"}


id: PR:Q9UTH2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An electron transfer flavoprotein subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01161","PANTHER:PTHR21294:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.02c","secondary_identifiers":["UniProtKB:Q9UTH2"],"synonyms":[{"name":"Spom972h-ETFB","type":"exact"},{"name":"beta-ETF (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTH2"}


id: PBO:0057291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 509-3","termid":"PBO:0057291"}


id: GO:0016122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xanthophylls, oxygen-containing carotenoids.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid metabolic process","termid":"GO:0016116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"xanthophyll metabolic process","synonyms":[{"name":"xanthophyll metabolism","type":"exact"}],"termid":"GO:0016122"}


id: GO:0044870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism modulates the frequency, rate or extent of viral glycoprotein metabolic process.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of viral process","termid":"GO:0044788"},{"relation_name":"regulates","term_name":"glycoprotein metabolic process","termid":"GO:0009100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by host of viral glycoprotein metabolic process","termid":"GO:0044870"}


id: PBO:0062560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily A member 7","termid":"PBO:0062560"}


id: GO:0061528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of aspartate by a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4-dicarboxylate transport","termid":"GO:0015740"},{"relation_name":"is_a","term_name":"acidic amino acid transport","termid":"GO:0015800"},{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"aspartate secretion","termid":"GO:0061528"}


id: MONDO:0002787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A craniopharyngioma consisting of broad strands, cords and bridges of a multistratified squamous epithelium with peripheral palisading of nuclei. Diagnostic features include nodules of compact 'wet' keratin and dystrophic calcification. (Adapted from WHO)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"craniopharyngioma","termid":"MONDO:0018907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adamantinous craniopharyngioma","secondary_identifiers":["UMLS:C0431129","ICDO:9351/1","MEDGEN:98126","NCIT:C4726","DOID:3846"],"synonyms":[{"name":"adamantinomatous craniopharyngioma","type":"exact"},{"name":"adamantinous Rathke's pouch neoplasm","type":"exact"},{"name":"adamantinous Rathke's pouch tumor","type":"exact"},{"name":"adamantinous Rathke's pouch tumour","type":"exact"},{"name":"adamantinous craniopharyngioma (morphologic abnormality)","type":"exact"},{"name":"adamantinous neoplasm of Rathke's pouch","type":"exact"},{"name":"adamantinous tumor of Rathke's pouch","type":"exact"},{"name":"adamantinous tumour of Rathke's pouch","type":"exact"},{"name":"craniopharyngioma, adamantinomatous","type":"exact"}],"termid":"MONDO:0002787","xrefs":{"Monarch":{"xref_id":"0002787"}}}


id: GO:0044628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of complement activation by the classical pathway, in a different organism.","definition_xrefs":["GOC:jl","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of complement activation, classical pathway in another organism (obsolete GO:0044628)","synonyms":[{"name":"positive regulation of complement activation, classical pathway in other organism","type":"exact"}],"termid":"GO:0044628"}


id: GO:0070294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A renal system process in which sodium ions are taken up from the collecting ducts and proximal and distal loops of the nephron. In non-mammalian species, absorption may occur in related structures.","definition_xrefs":["GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal sodium ion transport","termid":"GO:0003096"},{"relation_name":"is_a","term_name":"renal absorption","termid":"GO:0070293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"renal sodium ion absorption","synonyms":[{"name":"nephron sodium ion absorption","type":"exact"},{"name":"renal sodium ion reabsorption","type":"exact"}],"termid":"GO:0070294"}


id: MONDO:0044344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection that is caused by Schistosoma japonicum.","definition_xrefs":["NCIT:C35001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schistosomiasis","termid":"MONDO:0015254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schistosoma japonicum infectious disease","secondary_identifiers":["MESH:D012554","SCTID:268058007"],"synonyms":[{"name":"Asiatic schistosomiasis","type":"related"},{"name":"Katamaya fever","type":"related"},{"name":"Katamaya syndrome","type":"related"},{"name":"Katayama disease","type":"related"},{"name":"Schistosoma japonicum caused disease or disorder","type":"exact"},{"name":"Schistosoma japonicum disease or disorder","type":"exact"},{"name":"Schistosoma japonicum infection","type":"exact"},{"name":"schistosomiasis japonicum","type":"related"}],"termid":"MONDO:0044344","xrefs":{"Monarch":{"xref_id":"0044344"}}}


id: PBO:0087212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent protein methyltransferase; capable of automethylation; member of the seven beta-strand family; YNL092W is not an essential gene","termid":"PBO:0087212"}


id: PBO:0055408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2838","termid":"PBO:0055408"}


id: GO:0050619
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3Z)-phytochromobilin + oxidized ferredoxin = biliverdin IXa + reduced ferredoxin.","definition_xrefs":["MetaCyc:1.3.7.4-RXN","EC:1.3.7.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor","termid":"GO:0016636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phytochromobilin:ferredoxin oxidoreductase activity","secondary_identifiers":["RHEA:16377"],"synonyms":[{"name":"(3Z)-phytochromobilin:ferredoxin oxidoreductase activity","type":"related"},{"name":"HY2","type":"related"},{"name":"P-Phi-B synthase activity","type":"related"},{"name":"PFB synthase activity","type":"related"},{"name":"PPhiB synthase activity","type":"related"},{"name":"phytochromobilin synthase activity","type":"related"}],"termid":"GO:0050619"}


id: PBO:0053088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 1F","termid":"PBO:0053088"}


id: PBO:0076246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUV39H1 histone lysine methyltransferase","termid":"PBO:0076246"}


id: GO:0099063
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic recycling endosome membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of postsynaptic recycling endosome membrane (obsolete GO:0099063)","termid":"GO:0099063"}


id: PATO:0001233
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the back or upper surface of an organism relative to another entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsal to","synonyms":[{"name":"dorsal","type":"exact"},{"name":"posterior_to (human torso)","type":"exact"},{"name":"superior_to (human head)","type":"exact"}],"termid":"PATO:0001233"}


id: PBO:0076625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBCEL-TECTA readthrough","termid":"PBO:0076625"}


id: PBO:0027007
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ascospore_wall_thickness","termid":"PBO:0027007"}


id: _global:is_bearer_of
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_bearer_of","secondary_identifiers":["BFO:0000053"],"synonyms":[{"name":"has_color","type":"narrow"}],"termid":"_global:is_bearer_of"}


id: GO:0003859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (3R)-3-hydroxybutanoyl-CoA = (2E)-butenoyl-CoA + H2O.","definition_xrefs":["RHEA:17849","EC:4.2.1.55"],"gene_count":0,"genotype_count":0,"name":"obsolete (3R)-3-hydroxybutyryl-CoA dehydratase activity (obsolete GO:0003859)","synonyms":[{"name":"(3R)-3-hydroxybutanoyl-CoA hydro-lyase (crotonoyl-CoA-forming)","type":"related"},{"name":"(3R)-3-hydroxybutanoyl-CoA hydro-lyase activity","type":"related"},{"name":"3-hydroxybutyryl-CoA dehydratase activity","type":"broad"},{"name":"D-3-hydroxybutyryl coenzyme A dehydratase activity","type":"related"},{"name":"D-3-hydroxybutyryl-CoA dehydratase activity","type":"related"},{"name":"crotonase activity","type":"related"},{"name":"enoyl coenzyme A hydrase (D)","type":"broad"}],"termid":"GO:0003859"}


id: PBO:0076620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor C","termid":"PBO:0076620"}


id: GO:0003673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A controlled vocabulary that can be applied to all organisms even as knowledge of gene and protein roles in cells is accumulating and changing. GO provides three structured networks of defined terms to describe gene product attributes.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete Gene_Ontology (obsolete GO:0003673)","synonyms":[{"name":"Gene_Ontology","type":"exact"}],"termid":"GO:0003673"}


id: PATO:0001636
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A necessity quality (continuant) inhering in a bearer by virtue of the bearer's being non-essential or dispensable.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"necessity (continuant)","termid":"PATO:0001634"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unnecessary (continuant)","termid":"PATO:0001636"}


id: PBO:0029372
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_medial_cortex_during_vegetative_growth","termid":"PBO:0029372"}


id: GO:0047089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrochelirubine + H+ + NADPH + O2 = 12-hydroxydihydrochelirubine + H2O + NADP+.","definition_xrefs":["RHEA:10156","EC:1.14.14.101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"dihydrochelirubine 12-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R04708","MetaCyc:1.14.13.57-RXN"],"synonyms":[{"name":"dihydrochelirubine 12-hydroxylase activity","type":"exact"},{"name":"dihydrochelirubine,NADPH:oxygen oxidoreductase (12-hydroxylating)","type":"related"}],"termid":"GO:0047089"}


id: PBO:0089076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rcl1","termid":"PBO:0089076"}


id: GO:1900670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of F-9775A biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polyketide biosynthetic process","termid":"GO:1900732"},{"relation_name":"regulates","term_name":"F-9775A biosynthetic process","termid":"GO:1900611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"regulation of F-9775A biosynthetic process","synonyms":[{"name":"regulation of F-9775A anabolism","type":"exact"},{"name":"regulation of F-9775A biosynthesis","type":"exact"},{"name":"regulation of F-9775A formation","type":"exact"},{"name":"regulation of F-9775A synthesis","type":"exact"}],"termid":"GO:1900670"}


id: PBO:0049562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B.K variant histone 1","termid":"PBO:0049562"}


id: PR:O60083
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tfb6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1494.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.09c","synonyms":[{"name":"Spom972h-tfb6","type":"exact"}],"termid":"PR:O60083"}


id: GO:0050411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: agaritine + acceptor-NH2 = 4-hydroxymethylphenylhydrazine + gamma-L-glutamyl-acceptor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete agaritine gamma-glutamyltransferase activity (obsolete GO:0050411)","synonyms":[{"name":"(gamma-L-glutamyl)-1-N-(4-hydroxymethylphenyl)hydrazine:(acceptor) gamma-glutamyltransferase activity","type":"related"},{"name":"(gamma-L-glutamyl)-N1-(4-hydroxymethylphenyl)hydrazine:(acceptor) gamma-glutamyltransferase activity","type":"related"},{"name":"agaritine g-glutamyltransferase activity","type":"exact"}],"termid":"GO:0050411"}


id: PBO:0039333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline phosphatase, intestinal","termid":"PBO:0039333"}


id: FYPO:0002066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell has no septum, is elongated, and is inviable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated aseptate vegetative cell","termid":"FYPO:0000950"},{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable aseptate vegetative cell","termid":"FYPO:0003931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000004","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000005","FYPO:0001320","FYPO:0000032"],"is_obsolete":false,"name":"inviable elongated aseptate cell","synonyms":[{"name":"inviable elongated aseptate cell during mitotic cell cycle","type":"related"},{"name":"inviable elongated aseptate cell during vegetative growth","type":"exact"},{"name":"inviable long aseptate cell","type":"exact"},{"name":"lethal; elongated aseptate cell","type":"exact"}],"termid":"FYPO:0002066"}


id: FYPO:0009106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the divided nuclei are located closer to the cell equator during telophase of the mitotic cell cycle when compared to wild-type cells.","definition_xrefs":["PMID:37099380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized nucleus during mitotic telophase","termid":"FYPO:0009105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"nucleus mislocalized towards cell equator during mitotic telophase","synonyms":[{"name":"nuclear displaced towards cell equator during mitotic telophase","type":"exact"},{"name":"nuclear displaced towards cytokinetic ring during mitotic telophase","type":"exact"},{"name":"nuclear displacement towards cell equator during mitotic telophase","type":"exact"},{"name":"nuclear displacement towards cytokinetic ring during mitotic telophase","type":"exact"}],"termid":"FYPO:0009106"}


id: PBO:0055972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and IQ motif containing 1","termid":"PBO:0055972"}


id: PBO:0042733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein K","termid":"PBO:0042733"}


id: PBO:0053723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 937","termid":"PBO:0053723"}


id: FYPO:0000769
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121222,121468,121466,121461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003779"},{"annotations":[121571,121567,121575,121580,121583,121568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001556"},{"annotations":[121554],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of all or part of the nuclear envelope is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"},{"relation_name":"is_a","term_name":"abnormal endomembrane system morphology","termid":"FYPO:0000353"},{"relation_name":"output_of","term_name":"abnormal nuclear envelope organization","termid":"FYPO:0000815"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01745":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03449":null,"SJAG_03940":null,"SJAG_04464":null},"genotype_count":11,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002403","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal nuclear envelope morphology during vegetative growth","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_01745","SJAG_03940","SJAG_03449","SJAG_01906","SJAG_02763","SJAG_04464"],"single_locus_genotype_uniquenames":["man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","ned1delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta","nem2delta","lem2delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal nuclear envelope morphology during mitotic cell cycle","type":"exact"},{"name":"abnormal nuclear membrane morphology","type":"narrow"}],"termid":"FYPO:0000769","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000162":null,"FYPO:0001556":null,"FYPO:0003779":null,"FYPO:0003976":null,"FYPO_EXT:0000001":null}}


id: PBO:0028393
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_osmotic_stress","termid":"PBO:0028393"}


id: PBO:0067179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 237, pseudogene","termid":"PBO:0067179"}


id: GO:0050153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-hydroxydecanoate + NAD+ = 10-oxodecanoate + H+ + NADH.","definition_xrefs":["RHEA:20880","EC:1.1.1.66"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"omega-hydroxydecanoate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03886","MetaCyc:OMEGA-HYDROXYDECANOATE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"10-hydroxydecanoate:NAD+ 10-oxidoreductase activity","type":"related"},{"name":"w-hydroxydecanoate dehydrogenase activity","type":"exact"}],"termid":"GO:0050153"}


id: MONDO:0014378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the CCNO gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 29","secondary_identifiers":["OMIM:615872","UMLS:C4014534","DOID:0110600","MEDGEN:862971","GARD:16025","NCIT:C172393"],"synonyms":[{"name":"CCNO primary ciliary dyskinesia","type":"exact"},{"name":"CILD29","type":"exact"},{"name":"ciliary dyskinesia, primary, 29","type":"related"},{"name":"ciliary dyskinesia, primary, 29, without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 29","type":"exact"},{"name":"primary ciliary dyskinesia 29 without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in CCNO","type":"exact"},{"name":"primary ciliary dyskinesia type 29","type":"exact"}],"termid":"MONDO:0014378","xrefs":{"Monarch":{"xref_id":"0014378"}}}


id: PBO:0029849
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_riboflavin_binding","termid":"PBO:0029849"}


id: PBO:0113801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine transferase anchoring subunit Alg14","termid":"PBO:0113801"}


id: PBO:0083345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene DAD4/YDR320C-A","termid":"PBO:0083345"}


id: PBO:0048115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FUN14 domain containing 2 pseudogene 3","termid":"PBO:0048115"}


id: GO:1901492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lymphangiogenesis.","definition_xrefs":["PMID:20133819","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of lymphangiogenesis","termid":"GO:1901490"},{"relation_name":"positively_regulates","term_name":"lymphangiogenesis","termid":"GO:0001946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphangiogenesis","synonyms":[{"name":"activation of lymph vessel formation","type":"narrow"},{"name":"activation of lymphangiogenesis","type":"narrow"},{"name":"positive regulation of lymph vessel formation","type":"exact"},{"name":"up regulation of lymph vessel formation","type":"exact"},{"name":"up regulation of lymphangiogenesis","type":"exact"},{"name":"up-regulation of lymph vessel formation","type":"exact"},{"name":"up-regulation of lymphangiogenesis","type":"exact"},{"name":"upregulation of lymph vessel formation","type":"exact"},{"name":"upregulation of lymphangiogenesis","type":"exact"}],"termid":"GO:1901492"}


id: PBO:0063429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 3","termid":"PBO:0063429"}


id: GO:0070635
data:
  {"annotated_genes":["SJAG_00957"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92527],"is_not":false,"summary":null,"term":"GO:0070635"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: nicotinamide riboside + H2O = nicotinamide + D-ribose.","definition_xrefs":["PMID:19001417","MetaCyc:RXN-8441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"nicotinamide riboside hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"N-ribosylnicotinamide hydrolase activity","type":"exact"},{"name":"nicotinamide ribonucleoside hydrolase activity","type":"exact"}],"termid":"GO:0070635","terms_by_termid":{"GO:0070635":null}}


id: PBO:0038280
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"first_approved_timestamp","termid":"PBO:0038280"}


id: PBO:0000748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase complex subunit Alg1 (predicted)","termid":"PBO:0000748"}


id: PBO:0084357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lectin-like protein with similarity to Flo1p; thought to be expressed and involved in flocculation","termid":"PBO:0084357"}


id: PBO:0039195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKNA domain containing 1","termid":"PBO:0039195"}


id: PBO:0045317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxynucleotidyltransferase terminal interacting protein 2","termid":"PBO:0045317"}


id: MONDO:0010948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the CRYBA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 10 multiple types","secondary_identifiers":["MESH:C563435","OMIM:600881","DOID:0110258","MEDGEN:318817","UMLS:C1833229"],"synonyms":[{"name":"CCZS","type":"narrow"},{"name":"CRYBA1 early-onset non-syndromic cataract","type":"exact"},{"name":"CTRCT10","type":"exact"},{"name":"cataract 10, multiple types","type":"related"},{"name":"cataract, congenital zonular, with sutural opacities","type":"related"},{"name":"congenital zonular cataract with sutural opacities","type":"narrow"},{"name":"early-onset non-syndromic cataract caused by mutation in CRYBA1","type":"exact"}],"termid":"MONDO:0010948","xrefs":{"Monarch":{"xref_id":"0010948"}}}


id: PBO:0060486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox retrogene P8","termid":"PBO:0060486"}


id: PBO:0054568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1970","termid":"PBO:0054568"}


id: MONDO:0100074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections caused by viruses of the genus in the family caliciviridae, which is associated with epidemic gastroenteritis in humans.","definition_xrefs":["MESH:D029322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Caliciviridae infectious disease","termid":"MONDO:0005687"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"norovirus infectious disease","termid":"MONDO:0100074","xrefs":{"Monarch":{"xref_id":"0100074"}}}


id: FYPO:0002706
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of cordycepin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0002682"],"is_obsolete":false,"name":"resistance to cordycepin","synonyms":[{"name":"resistance to cordycepin during mitotic cell cycle","type":"related"},{"name":"resistance to cordycepin during vegetative growth","type":"exact"},{"name":"resistant to cordycepin","type":"exact"}],"termid":"FYPO:0002706"}


id: PBO:0041089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bombesin receptor subtype 3","termid":"PBO:0041089"}


id: MONDO:0014347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Rothmund-Thomson syndrome","termid":"MONDO:0010002"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Rothmund-Thomson syndrome, type 3","secondary_identifiers":["OMIM:615789","MEDGEN:862776","UMLS:C4014339"],"synonyms":[{"name":"short stature with microcephaly and distinctive facies","type":"exact"}],"termid":"MONDO:0014347","xrefs":{"Monarch":{"xref_id":"0014347"}}}


id: PBO:0058936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial sheath formation associated","termid":"PBO:0058936"}


id: PBO:0116979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCRL3 antisense RNA 1","termid":"PBO:0116979"}


id: PBO:0029106
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_proline_level","termid":"PBO:0029106"}


id: GO:0002775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of an antimicrobial peptide during an immune response, resulting in an increase in intracellular or extracellular levels. Such peptides may have protective properties against bacteria, fungi, viruses, or protozoa.","definition_xrefs":["PMID:15638771","ISBN:0781735149","GOC:add","PMID:11807545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"},{"relation_name":"part_of","term_name":"antimicrobial humoral immune response mediated by antimicrobial peptide","termid":"GO:0061844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"antimicrobial peptide production","termid":"GO:0002775"}


id: PBO:0003109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 2","termid":"PBO:0003109"}


id: GO:0061142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from a mesothelial cell to an epithelial cell and contributes to the development of the lung.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in lung development","termid":"GO:0060495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"mesothelial-mesenchymal cell signaling involved in early lung development","synonyms":[{"name":"mesothelial-mesenchymal cell signalling involved in early lung development","type":"exact"}],"termid":"GO:0061142"}


id: PBO:0065526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patched domain containing 1","termid":"PBO:0065526"}


id: PBO:0082300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arsenate reductase required for arsenate resistance; converts arsenate to arsenite which can then be exported from cells by Arr3p","termid":"PBO:0082300"}


id: PBO:0075322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 2","termid":"PBO:0075322"}


id: PBO:0057845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3158-1","termid":"PBO:0057845"}


id: PBO:0077692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNFAIP3 interacting protein 3","termid":"PBO:0077692"}


id: GO:0052332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of a cellular membrane of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by organism of membrane in other organism involved in symbiotic interaction (obsolete GO:0052332)","synonyms":[{"name":"modification by organism of cell membrane in other organism during symbiotic interaction","type":"related"},{"name":"modification by organism of cell membrane in other organism involved in symbiotic interaction","type":"narrow"}],"termid":"GO:0052332"}


id: PBO:0001332
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inherited protein folding defects","termid":"PBO:0001332"}


id: PBO:0059249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L18","termid":"PBO:0059249"}


id: GO:0003321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the force of blood traveling through the circulatory system is increased by the chemicals epinephrine and norepinephrine.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by norepinephrine-epinephrine","termid":"GO:0001993"},{"relation_name":"is_a","term_name":"positive regulation of blood pressure","termid":"GO:0045777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood pressure by epinephrine-norepinephrine","termid":"GO:0003321"}


id: PBO:0001724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Cki3","termid":"PBO:0001724"}


id: PBO:0054530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1930","termid":"PBO:0054530"}


id: PBO:0052937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 22-1","termid":"PBO:0052937"}


id: GO:2000191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fatty acid transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"regulates","term_name":"fatty acid transport","termid":"GO:0015908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of fatty acid transport","termid":"GO:2000191"}


id: FYPO:0003709
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype in which cells adhere to other cells of compatible mating type less strongly or to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell adhesion","termid":"FYPO:0001872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased agglutination","synonyms":[{"name":"decreased agglutination involved in conjugation with cellular fusion","type":"exact"},{"name":"reduced agglutination","type":"exact"}],"termid":"FYPO:0003709"}


id: MONDO:0859200
data:
  {"annotated_genes":["SJAG_04153"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88080],"is_not":false,"summary":null,"term":"MONDO:0859200"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04153":null},"genotype_count":0,"is_obsolete":false,"name":"cerebellar ataxia, brain abnormalities, and cardiac conduction defects","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5562005","MEDGEN:1794215","OMIM:619576","Orphanet:641361"],"synonyms":[{"name":"neurodevelopmental delay-hypotonia-cerebellar ataxia-cardiac conduction defects syndrome","type":"exact"}],"termid":"MONDO:0859200","terms_by_termid":{"MONDO:0859200":null},"xrefs":{"Monarch":{"xref_id":"0859200"}}}


id: PBO:0055807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidylcholine acyltransferase 2b, pseudogene","termid":"PBO:0055807"}


id: PBO:0040201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 14","termid":"PBO:0040201"}


id: PATO:0002151
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved outwards from the back or upper surface of an organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splayed","termid":"PATO:0001785"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splayed dorsal","synonyms":[{"name":"splayed posterior (human torso)","type":"related"}],"termid":"PATO:0002151"}


id: PBO:0059744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 18","termid":"PBO:0059744"}


id: MOD:01910
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one hydrogen atom of a residue with one fluorine atom.","definition_xrefs":["Unimod:127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorinated residue","termid":"MOD:00498"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monofluorinated residue","synonyms":[{"name":"F1Res","type":"exact"}],"termid":"MOD:01910"}


id: MOD:01609
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 7'-hydroxy-2'-alpha-mannosyl-L-tryptophan.","definition_xrefs":["RESID:AA0506","PubMed:19584055"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"2'-alpha-mannosyl-L-tryptophan","termid":"MOD:00222"},{"relation_name":"has_functional_parent","term_name":"7'-hydroxy-L-tryptophan","termid":"MOD:01664"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"7'-hydroxy-2'-alpha-mannosyl-L-tryptophan","synonyms":[{"name":"(2S)-2-amino-3-[7-hydroxy-2-(alpha-D-mannopyranosyl)-1H-indol-3-yl]propanoic acid","type":"exact"},{"name":"7'-hydroxy-2'-alpha-mannosyl-L-tryptophan","type":"exact"},{"name":"CARBOHYD C-linked (Man) hydroxytryptophan","type":"exact"}],"termid":"MOD:01609"}


id: GO:0050747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving lipoproteins, any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of lipoprotein metabolic process","termid":"GO:0050746"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"positively_regulates","term_name":"lipoprotein metabolic process","termid":"GO:0042157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipoprotein metabolic process","synonyms":[{"name":"activation of lipoprotein metabolic process","type":"narrow"},{"name":"positive regulation of lipoprotein metabolism","type":"exact"},{"name":"stimulation of lipoprotein metabolic process","type":"narrow"},{"name":"up regulation of lipoprotein metabolic process","type":"exact"},{"name":"up-regulation of lipoprotein metabolic process","type":"exact"},{"name":"upregulation of lipoprotein metabolic process","type":"exact"}],"termid":"GO:0050747"}


id: PR:P21536
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp8 gene.","definition_xrefs":["UniProtKB:P21536","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.09","synonyms":[{"name":"A6L (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"F-ATPase subunit 8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-atp8","type":"exact"}],"termid":"PR:P21536"}


id: GO:0072310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a glomerular epithelial cell over time, from its formation to the mature structure. Glomerular epithelial cells are specialized epithelial cells that form part of the glomerulus; there are two types, glomerular parietal epithelial cells and glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"glomerular epithelial cell differentiation","termid":"GO:0072311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular epithelial cell development","termid":"GO:0072310"}


id: GO:0032483
data:
  {"annotated_genes":["SJAG_03488","SJAG_04329"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71763,76640],"is_not":false,"summary":null,"term":"GO:0032483"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Rab protein signal transduction.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"regulates","term_name":"Rab protein signal transduction","termid":"GO:0032482"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03488":null,"SJAG_04329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of Rab protein signal transduction","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0032483","terms_by_termid":{"GO:0032483":null}}


id: MONDO:0002235
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the eyelid. Representative examples include hemangioma, nevus, and carcinoma.","definition_xrefs":["NCIT:C3031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"},{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"},{"relation_name":"is_a","term_name":"eye neoplasm","termid":"MONDO:0021220"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"eyelid neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D005142","Orphanet:98580","DOID:2173","UMLS:C0015424","EFO:1000934","MEDGEN:41939","SCTID:278697001"],"synonyms":[{"name":"eyelid neoplasm","type":"exact"},{"name":"eyelid neoplasm (disease)","type":"exact"},{"name":"eyelid tumor","type":"exact"},{"name":"eyelid tumour","type":"exact"},{"name":"neoplasm of eyelid","type":"exact"},{"name":"neoplasm of the eyelid","type":"exact"},{"name":"palpebral tumor","type":"exact"},{"name":"palpebral tumour","type":"exact"},{"name":"tumor of eyelid","type":"exact"},{"name":"tumor of the eyelid","type":"exact"},{"name":"tumour of eyelid","type":"exact"},{"name":"tumour of the eyelid","type":"exact"}],"termid":"MONDO:0002235","terms_by_termid":{"MONDO:0008097":null},"xrefs":{"Monarch":{"xref_id":"0002235"}}}


id: PBO:0060543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAV2 antisense RNA 3","termid":"PBO:0060543"}


id: PBO:0078979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon GCT) 5-1","termid":"PBO:0078979"}


id: PBO:0034144
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_within-species_paralogy_relationship_with","termid":"PBO:0034144"}


id: GO:0000239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which follows zygotene during prophase I of meiosis, and during which crossing over occurs between a chromatid in one partner and another chromatid in the homologous chromosome.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle phase","termid":"GO:0098764"},{"relation_name":"part_of","term_name":"meiotic prophase I","termid":"GO:0007128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007128"}],"interesting_parent_ids":["GO:0007128","GO:0008150"],"is_obsolete":false,"name":"pachytene","secondary_identifiers":["Wikipedia:Pachytene","Wikipedia:Meiosis#Pachytene"],"termid":"GO:0000239"}


id: GO:2000743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anterior head development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of anterior head development","termid":"GO:2000742"},{"relation_name":"negatively_regulates","term_name":"anterior head development","termid":"GO:0097065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of anterior head development","termid":"GO:2000743"}


id: MONDO:0005766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pulmonary diseases caused by fungal infections, usually through hematogenous spread.","definition_xrefs":["MESH:D008172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"},{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"},{"relation_name":"is_a","term_name":"respiratory tract infectious disorder","termid":"MONDO:0024355"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal lung infectious disease","secondary_identifiers":["UMLS:C0024116","EFO:0007278","MEDGEN:6144"],"synonyms":[{"name":"Fungi caused lung disease","type":"exact"},{"name":"Fungi lung disease","type":"exact"},{"name":"fungal disease, pulmonary","type":"related"},{"name":"fungal diseases, pulmonary","type":"related"},{"name":"fungal infection, pulmonary","type":"related"},{"name":"fungal infections, pulmonary","type":"related"},{"name":"fungal lung disease","type":"related"},{"name":"fungal lung diseases","type":"related"},{"name":"lung disease, fungal","type":"related"},{"name":"pulmonary fungal disease","type":"related"},{"name":"pulmonary fungal diseases","type":"related"},{"name":"pulmonary fungal infection","type":"related"},{"name":"pulmonary fungal infections","type":"related"}],"termid":"MONDO:0005766","xrefs":{"Monarch":{"xref_id":"0005766"}}}


id: PBO:0049412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase 2C","termid":"PBO:0049412"}


id: GO:0140952
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl27-[histone H3] + 2 S-adenosyl-L-methionine = 2 H+ + N6,N6-dimethyl-L-lysyl27-[histone H3] + 2 S-adenosyl-L-homocysteine. This reaction is the successive addition of two methyl groups to the unmethylated lysine residue at position 27 of histone H3, producing histone H3K27me2.","definition_xrefs":["RHEA:64452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K27 methyltransferase activity","termid":"GO:0046976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0140096","GO:0003674","GO:0016740","GO:0008276"],"is_obsolete":false,"name":"histone H3K27 dimethyltransferase activity","secondary_identifiers":["EC:2.1.1.371"],"synonyms":[{"name":"histone H3-K27 dimethylase activity","type":"exact"},{"name":"histone H3-K27 dimethylation","type":"broad"},{"name":"histone H3K27 dimethylase activity","type":"exact"},{"name":"histone H3K27 dimethylation","type":"broad"},{"name":"histone H3K27 mono/dimethylase activity","type":"exact"},{"name":"histone lysine N-dimethyltransferase activity (H3-K27 specific)","type":"exact"}],"termid":"GO:0140952"}


id: GO:0046528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process following disc eversion whereby imaginal discs fuse with adjacent disc derivatives to form a continuous adult epidermis.","definition_xrefs":["PMID:11494317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc fusion","termid":"GO:0046528"}


id: MONDO:0006820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Death of cells in the kidney cortex, a common final result of various renal injuries including hypoxia; ischemia; and drug toxicity.","definition_xrefs":["MESH:D007673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"kidney cortex necrosis","secondary_identifiers":["UMLS:C0022656","DOID:2973","MEDGEN:9634","SCTID:444691002","ICD9:583.6","MedDRA:10023414"],"synonyms":[{"name":"renal cortical necrosis","type":"exact"}],"termid":"MONDO:0006820","xrefs":{"Monarch":{"xref_id":"0006820"}}}


id: GO:0062025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modualtes the rate, frequency or extent of SCF-dependent proteasomal ubiquitin-dependent protein catabolic process, the chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by an SCF (Skp1/Cul1/F-box protein) complex, and mediated by the proteasome.","definition_xrefs":["PMID:28007894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0032434"},{"relation_name":"regulates","term_name":"SCF-dependent proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0031146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"regulation of SCF-dependent proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0062025"}


id: MONDO:1011628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paroxysm, non-human animal","secondary_identifiers":["OMIA:000772"],"termid":"MONDO:1011628","xrefs":{"Monarch":{"xref_id":"1011628"}}}


id: GO:0052598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + histamine + O2 = H2O2 + imidazole-4-acetaldehyde + NH4+.","definition_xrefs":["RHEA:25625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diamine oxidase activity","termid":"GO:0052597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"histamine oxidase activity","secondary_identifiers":["Reactome:R-HSA-5696131","KEGG_REACTION:R02150","MetaCyc:RXN-9600"],"synonyms":[{"name":"1H-Imidazole-4-ethanamine oxidase activity","type":"exact"},{"name":"1H-Imidazole-4-ethanamine:oxygen oxidoreductase (deaminating) activity","type":"exact"},{"name":"histamine:oxygen oxidoreductase (deaminating) activity","type":"exact"}],"termid":"GO:0052598"}


id: PR:O59733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-splicing factor SYF2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13264:SF5","OMA:SCHPO03374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor syf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.13c","secondary_identifiers":["UniProtKB:O59733"],"synonyms":[{"name":"Spom972h-SYF2","type":"exact"}],"termid":"PR:O59733"}


id: GO:0033336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the caudal fin over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medial fin development","termid":"GO:0033338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caudal fin development","termid":"GO:0033336"}


id: PBO:0046962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM83A antisense RNA 1","termid":"PBO:0046962"}


id: FYPO:0002322
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of all-trans-farnesyl diphosphate (FPP) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular FPP level","synonyms":[{"name":"decreased cellular 2-trans,6-trans-farnesyl diphosphate level","type":"exact"},{"name":"decreased cellular FPP accumulation","type":"related"},{"name":"decreased cellular FPP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular FPP level during vegetative growth","type":"exact"},{"name":"decreased cellular farnesyl diphosphate level","type":"broad"},{"name":"decreased cellular farnesyl pyrophosphate level","type":"broad"},{"name":"reduced cellular FPP level","type":"exact"}],"termid":"FYPO:0002322"}


id: MONDO:0014276
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Combined immunodeficiency due to CD3gamma deficiency is an extremely rare genetic combined primary immunodeficiency characterized by a selective partial lymphopenia (T+/-B+NK+) phenotype and decreased CD3 complex resulting in a variable but usually mild clinical presentation ranging from asymptomatic until adulthood to high susceptibility to infections from early infancy with predominant automimmune manifestations.","definition_xrefs":["Orphanet:169082"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"severe combined immunodeficiency","termid":"MONDO:0015974"},{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency due to CD3gamma deficiency","secondary_identifiers":["DOID:0060018","MEDGEN:816437","SCTID:725135004","DOID:0111973","OMIM:615607","UMLS:C3810107","GARD:17046"],"synonyms":[{"name":"CD3 deficiency","type":"exact"},{"name":"CD3-gamma deficiency","type":"exact"},{"name":"CD3gamma deficiency","type":"exact"},{"name":"IMD17","type":"exact"},{"name":"SCID-like immunodeficiency, T cell-partial, B cell-positive, NK cell-positive","type":"exact"},{"name":"combined immunodeficiency due to CD3gamma deficiency","type":"exact"},{"name":"immunodeficiency 17","type":"exact"},{"name":"immunodeficiency 17, CD3 gamma deficient","type":"exact"},{"name":"immunodeficiency type 17","type":"exact"}],"termid":"MONDO:0014276","xrefs":{"Monarch":{"xref_id":"0014276"}}}


id: GO:1904857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial cell chemotaxis to vascular endothelial growth factor.","definition_xrefs":["GOC:TermGenie","PMID:21885851","GOC:BHF_miRNA","GOC:BHF","GO_REF:0000058","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"is_a","term_name":"regulation of cellular response to vascular endothelial growth factor stimulus","termid":"GO:1902547"},{"relation_name":"regulates","term_name":"endothelial cell chemotaxis to vascular endothelial growth factor","termid":"GO:0090668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial cell chemotaxis to vascular endothelial growth factor","termid":"GO:1904857"}


id: PBO:0039728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B receptor","termid":"PBO:0039728"}


id: MONDO:0025699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Coffin-Siris syndrome","termid":"MONDO:0015452"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coffin-Siris syndrome 12","secondary_identifiers":["GARD:16443","OMIM:619325","MEDGEN:1782096","DOID:0112370","UMLS:C5444111"],"synonyms":[{"name":"CSS12","type":"exact"}],"termid":"MONDO:0025699","xrefs":{"Monarch":{"xref_id":"0025699"}}}


id: PBO:0080697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 3A","termid":"PBO:0080697"}


id: PBO:0067493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 628, pseudogene","termid":"PBO:0067493"}


id: GO:0008064
data:
  {"annotated_genes":["SJAG_01993","SJAG_01894","SJAG_02566","SJAG_00521","SJAG_00279","SJAG_04479","SJAG_03086","SJAG_04100","SJAG_02700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81977,80924,77314,94206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[79152,81222,69535,78508,68635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament length","termid":"GO:0030832"},{"relation_name":"is_a","term_name":"regulation of actin filament organization","termid":"GO:0110053"},{"relation_name":"regulates","term_name":"actin polymerization or depolymerization","termid":"GO:0008154"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_04100":null,"SJAG_04479":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"regulation of actin polymerization or depolymerization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0008064","terms_by_termid":{"GO:0030833":null,"GO:0051016":null}}


id: PBO:0035756
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein-protein_interaction_during_cellular_response_to_salt_stress","termid":"PBO:0035756"}


id: SO:0001969
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant occurring within an intron of a coding transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron_variant","termid":"SO:0001627"},{"relation_name":"is_a","term_name":"coding_transcript_variant","termid":"SO:0001968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_transcript_intron_variant","synonyms":[{"name":"Jannovar:coding_transcript_intron_variant","type":"exact"},{"name":"coding sequence intron variant","type":"exact"}],"termid":"SO:0001969"}


id: MONDO:0003472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A contagious infestation of parasitic insects found on the head (Pediculus humanus capitis), body (Pediculus humanus corporis), or pubic area (Pthirus pubis) that typically cause itching and rash.","definition_xrefs":["NCIT:C128401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic ectoparasitic infectious disease","termid":"MONDO:0002875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"lice infestation","secondary_identifiers":["UMLS:C0030756","ICD10CM:B85.2","DOID:5502","ICD9:132.9","MEDGEN:18339","MESH:D010373"],"synonyms":[{"name":"Pediculus humanus infection","type":"exact"},{"name":"infections, Pediculus humanus","type":"related"},{"name":"infestation by Pediculus","type":"exact"},{"name":"louse infestation","type":"exact"},{"name":"louse infestation (& [pediculosis and Phthirus] or [lice])","type":"exact"},{"name":"mixed pediculosis","type":"exact"},{"name":"mixed pediculosis infestation","type":"exact"},{"name":"pediculosis","type":"exact"},{"name":"pediculosis + lice","type":"exact"},{"name":"pediculosis and Phthirus infection","type":"exact"},{"name":"pediculosis and Phthirus infections","type":"exact"},{"name":"pediculosis and Phthirus infestation","type":"exact"},{"name":"pediculosis, unspecified","type":"exact"}],"termid":"MONDO:0003472","xrefs":{"Monarch":{"xref_id":"0003472"}}}


id: PBO:0017826
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Chromosome Segregation in meiosis","termid":"PBO:0017826"}


id: GO:1900914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of octadecene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of olefin biosynthetic process","termid":"GO:1900911"},{"relation_name":"is_a","term_name":"regulation of octadecene metabolic process","termid":"GO:1900917"},{"relation_name":"regulates","term_name":"octadecene biosynthetic process","termid":"GO:1900682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of octadecene biosynthetic process","synonyms":[{"name":"regulation of 1-octadecene biosynthetic process","type":"exact"},{"name":"regulation of octadecene anabolism","type":"exact"},{"name":"regulation of octadecene biosynthesis","type":"exact"},{"name":"regulation of octadecene formation","type":"exact"},{"name":"regulation of octadecene synthesis","type":"exact"}],"termid":"GO:1900914"}


id: PBO:0063841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 4-kinase alpha","termid":"PBO:0063841"}


id: PBO:0058019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3945","termid":"PBO:0058019"}


id: GO:0004667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prostaglandin H(2) = prostaglandin D(2).","definition_xrefs":["EC:5.3.99.2","RHEA:10600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"prostaglandin-D synthase activity","secondary_identifiers":["KEGG_REACTION:R02266","Reactome:R-HSA-2161620","Reactome:R-HSA-2161701","MetaCyc:PROSTAGLANDIN-D-SYNTHASE-RXN"],"synonyms":[{"name":"(5,13)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate D-isomerase activity","type":"related"},{"name":"PGD2 synthase activity","type":"related"},{"name":"PGH-PGD isomerase activity","type":"related"},{"name":"prostaglandin D2 synthase activity","type":"related"},{"name":"prostaglandin-H2 D-isomerase activity","type":"related"},{"name":"prostaglandin-R-prostaglandin D isomerase activity","type":"related"}],"termid":"GO:0004667"}


id: GO:0090561
data:
  {"annotated_genes":["SJAG_01613","SJAG_04597","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99566,101149],"is_not":false,"summary":null,"term":"GO:0090561"},{"annotations":[96301],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902854"}]},"cv_name":"biological_process","definition":"The dynein-driven microtubule based nuclear migration, whereby daughter nuclei are positioned away from the cell division site prior to cytokinesis.","definition_xrefs":["GOC:vw","PMID:23087209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration along microtubule","termid":"GO:0030473"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01613":null,"SJAG_02431":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nuclear migration during mitotic telophase","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090561","terms_by_termid":{"GO:0090561":null,"GO:1902854":null}}


id: GO:0035369
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An immunoglobulin-like complex that is present in at least the plasma membrane of pre-B cells, and that is composed of two identical immunoglobulin heavy chains and two surrogate light chains, each composed of the lambda-5 and VpreB proteins, and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.","definition_xrefs":["PMID:16464608","GOC:add","PMID:17306522","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"pre-B cell receptor complex","synonyms":[{"name":"pre-BCR","type":"exact"}],"termid":"GO:0035369"}


id: GO:2000013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of arginine biosynthetic process via ornithine.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of arginine biosynthetic process","termid":"GO:1900079"},{"relation_name":"regulates","term_name":"L-arginine biosynthetic process via ornithine","termid":"GO:0042450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"regulation of arginine biosynthetic process via ornithine","synonyms":[{"name":"regulation of arginine anabolism via ornithine","type":"exact"},{"name":"regulation of arginine formation via ornithine","type":"exact"},{"name":"regulation of arginine synthesis via ornithine","type":"exact"}],"termid":"GO:2000013"}


id: PBO:0062898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxoeicosanoid receptor 1","termid":"PBO:0062898"}


id: PBO:0071337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L28 pseudogene 1","termid":"PBO:0071337"}


id: GO:0031720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a haptoglobin, any alpha2 globulin of blood plasma that can combine with free oxyhemoglobin to form a stable complex.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"haptoglobin binding","termid":"GO:0031720"}


id: GO:0110131
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that localizes to actin cortical patches at sites of endocytosis and negatively regulates barbed end F-actin assembly, resulting in the generation of free actin pools. The Aim21-Tda2 complex is necessary for efficient endocytosis and balancing the distribution of actin between patches and cables.","definition_xrefs":["PMID:29467252","GOC:rn","PMID:28706108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"actin cortical patch","termid":"GO:0030479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0030479"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0030479","GO:0005737","GO:0032991","GO:0015629","GO:0005938"],"is_obsolete":false,"name":"Aim21-Tda2 complex","synonyms":[{"name":"Aim21/Tda2 complex","type":"exact"}],"termid":"GO:0110131"}


id: PBO:0077472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 191C","termid":"PBO:0077472"}


id: PBO:0052663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 31","termid":"PBO:0052663"}


id: PBO:0091024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromo/chromo shadow domain family","termid":"PBO:0091024"}


id: GO:0039007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the pronephric nephron are generated and organized. A pronephric nephron is the functional unit of the pronephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron morphogenesis","termid":"GO:0072028"},{"relation_name":"part_of","term_name":"pronephric nephron development","termid":"GO:0039019"},{"relation_name":"part_of","term_name":"pronephros morphogenesis","termid":"GO:0072114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric nephron morphogenesis","termid":"GO:0039007"}


id: FYPO:0006247
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the G2/M transition of the mitotic cell cycle begins earlier than normal during a cellular response to osmotic stress. The duration of G2 phase is thus shorter than normal. The mitotic G2/M transition is the point at which a cell commits to entering M phase, and begins when the kinase activity of M cyclin/CDK complex reaches a threshold high enough for the cell cycle to proceed.","definition_xrefs":["GO:0000086","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature mitotic G2/M phase transition","termid":"FYPO:0002516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"premature mitotic G2/M phase transition during cellular response to osmotic stress","synonyms":[{"name":"advanced mitotic G2 phase progression during cellular response to osmotic stress","type":"related"},{"name":"advanced mitotic G2/M transition during cellular response to osmotic stress","type":"exact"},{"name":"cell cycle, mitotic G2 advance during cellular response to osmotic stress","type":"related"},{"name":"decreased duration of mitotic G2 phase during cellular response to osmotic stress","type":"related"},{"name":"decreased duration of mitotic G2 phase during cellular response to osmotic stress during vegetative growth","type":"related"},{"name":"decreased mitotic G2 duration during cellular response to osmotic stress","type":"related"},{"name":"increased rate of mitotic G2 phase progression during cellular response to osmotic stress","type":"related"},{"name":"mitotic G2 advance during cellular response to osmotic stress","type":"related"},{"name":"mitotic G2/M transition advance during cellular response to osmotic stress","type":"exact"},{"name":"mitotic G2/M transition advance during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"mitotic cell cycle advance at G2/M transition during cellular response to osmotic stress","type":"exact"},{"name":"premature G2/M phase transition during cellular response to osmotic stress during mitotic cell cycle","type":"exact"},{"name":"premature cell cycle progression through mitotic G2/M phase transition during cellular response to osmotic stress","type":"exact"},{"name":"premature mitotic G2/M phase transition during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"premature mitotic G2/M transition during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0006247"}


id: GO:0036027
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and urokinase-type plasminogen activator (PLAU); formation of the complex inhibits the serine protease activity of urokinase-type plasminogen activator.","definition_xrefs":["GOC:ans","PMID:3501295","PMID:8536714","PMID:10340997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein C inhibitor-PLAU complex","synonyms":[{"name":"PCI-PLAU complex","type":"exact"},{"name":"SERPINA5-PLAU complex","type":"exact"},{"name":"plasma serine protease inhibitor-PLAU complex","type":"exact"},{"name":"protein C inhibitor-U-plasminogen activator complex","type":"exact"},{"name":"protein C inhibitor-uPA complex","type":"exact"},{"name":"protein C inhibitor-urokinase-type plasminogen activator complex","type":"exact"},{"name":"serpin A5-PLAU complex","type":"exact"}],"termid":"GO:0036027"}


id: PBO:0080540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain binding protein 1","termid":"PBO:0080540"}


id: PBO:0013026
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CMD1","termid":"PBO:0013026"}


id: GO:0098522
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A neuromuscular junction in which the target muscle cell is a skeletal muscle fiber.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitatory neuromuscular junction","termid":"GO:0098520"},{"relation_name":"is_a","term_name":"neuromuscular junction of myotube","termid":"GO:0098523"},{"relation_name":"is_a","term_name":"cholinergic synapse","termid":"GO:0098981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neuromuscular junction of skeletal muscle fiber","termid":"GO:0098522"}


id: PBO:0117386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like domain 4, phospholipase and triacylglycerol lipase","termid":"PBO:0117386"}


id: MONDO:0009358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hutterite cerebroosteonephrodysplasia syndrome","secondary_identifiers":["OMIM:236450","MEDGEN:343466","MESH:C536074","UMLS:C1856054"],"synonyms":[{"name":"Hutterite cerebroosteonephrodysplasia syndrome","type":"exact"},{"name":"cerebroosteonephosis syndrome","type":"related"},{"name":"cond","type":"related"}],"termid":"MONDO:0009358","xrefs":{"Monarch":{"xref_id":"0009358"}}}


id: PBO:0017094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"holo TFIIH complex subunit Tfb6","termid":"PBO:0017094"}


id: FYPO:0004038
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which an increase in RNA level that occurs as part of a cellular response to hydrogen peroxide begins later than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PMID:9450957","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to hydrogen peroxide","termid":"FYPO:0000194"},{"relation_name":"is_a","term_name":"delayed onset of increase in RNA level during cellular response to oxidative stress","termid":"FYPO:0007793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000298","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of increase in RNA level during cellular response to hydrogen peroxide","synonyms":[{"name":"delayed increase in RNA level during cellular response to hydrogen peroxide","type":"exact"},{"name":"delayed onset of increase in RNA level during cellular response to H2O2","type":"exact"},{"name":"delayed onset of increase in RNA level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"delayed onset of increase in RNA level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"delayed onset of increase in transcript level during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0004038"}


