# terms

id: GO:0141180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A chromatin-protein adaptor activity that bridges dsDNA and chromatin proteins to bring regions of a chromosome in proximity. The DNA:DNA:RNA triple-helical structure is formed non-Watson-Crick base-pairing.","definition_xrefs":["PMID:35412350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin-protein adaptor activity","termid":"GO:0140463"},{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0060090","GO:0030674","GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"dsDNA-RNA triple helix-forming chromatin adaptor activity","termid":"GO:0141180"}


id: MONDO:0012435
data:
  {"annotated_genes":["SJAG_01597"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87173],"is_not":false,"summary":null,"term":"MONDO:0012435"}]},"cv_name":"mondo","definition":"A syndrome characterized by severe early onset (before the age of three years) dilated cardiomyopathy (DCM) with conduction defects (long QT syndrome), non-progressive cerebellar ataxia, testicular dysgenesis, and 3-methylglutaconic aciduria.","definition_xrefs":["Orphanet:66634"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome associated with dilated cardiomyopathy (obsolete MONDO:0016337)","termid":"MONDO:0016337"},{"relation_name":"is_a","term_name":"3-methylglutaconic aciduria","termid":"MONDO:0017359"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"3-methylglutaconic aciduria type 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C173146","DOID:0110000","MESH:C565706","OMIM:610198","SCTID:711412004","MEDGEN:347542","UMLS:C1857776","GARD:12964","icd11.foundation:422277813"],"synonyms":[{"name":"3 alpha methylglutaconic aciduria type V","type":"related"},{"name":"3 methylglutaconic aciduria type V","type":"related"},{"name":"3-METHYLGLUTACONIC aciduria, type V","type":"related"},{"name":"3-Methylglutaconic aciduria, type 5","type":"related"},{"name":"3-methylglutaconic aciduria caused by mutation in DNAJC19","type":"exact"},{"name":"3-methylglutaconic aciduria type 5","type":"exact"},{"name":"3-methylglutaconic aciduria type V","type":"exact"},{"name":"DCMA","type":"exact"},{"name":"DCMA syndrome","type":"exact"},{"name":"DNAJC19 3-methylglutaconic aciduria","type":"exact"},{"name":"MGA 5","type":"related"},{"name":"MGA V","type":"related"},{"name":"MGA5","type":"exact"},{"name":"MGCA5","type":"exact"},{"name":"Mga, type 5","type":"related"},{"name":"cardiomyopathy, dilated, with ataxia","type":"related"},{"name":"dilated cardiomyopathy with ataxia","type":"exact"}],"termid":"MONDO:0012435","terms_by_termid":{"MONDO:0012435":null},"xrefs":{"Monarch":{"xref_id":"0012435"}}}


id: PBO:0073612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIAH2 antisense RNA 1","termid":"PBO:0073612"}


id: PBO:0052828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 128, pseudogene","termid":"PBO:0052828"}


id: MONDO:0021072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant paraganglioma arising from the chromaffin cells of the paraganglia that are located along the sympathetic nerves. It includes extra-adrenal paragangliomas and paragangliomas that arise from the adrenal medulla. The latter are commonly referred to as pheochromocytomas. Representative examples of extra-adrenal sympathetic paragangliomas include the bladder, and superior and inferior paraaortic paragangliomas. Clinical signs are related to the secretion of catecholamines resulting in hypertension.","definition_xrefs":["NCIT:C4216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraganglioma","termid":"MONDO:0000448"},{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"},{"relation_name":"is_a","term_name":"sympathetic nervous system disorder","termid":"MONDO:0044993"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sympathetic paraganglioma","secondary_identifiers":["UMLS:C0334415","ICDO:8681/1","SCTID:399343007","MESH:C531777","MEDGEN:137758"],"synonyms":[{"name":"Chromaffinoma","type":"exact"},{"name":"chromaffin neoplasm","type":"exact"},{"name":"chromaffin tumor","type":"exact"},{"name":"chromaffin tumour","type":"exact"},{"name":"paraganglioma of sympathetic nervous system","type":"exact"},{"name":"sympathetic Paraganglionic neoplasm","type":"exact"},{"name":"sympathetic nervous system paraganglioma","type":"exact"},{"name":"sympathetic paraganglioma","type":"exact"}],"termid":"MONDO:0021072","xrefs":{"Monarch":{"xref_id":"0021072"}}}


id: PBO:0003871
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.3.4","termid":"PBO:0003871"}


id: GO:0141024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a symbiont to its host by binding to a carbohydrate on the host cell surface. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:19527885","PMID:30736336","PMID:15210807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host cell","termid":"GO:0044650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont to host cell surface via host membrane carbohydrate","termid":"GO:0141024"}


id: GO:0048911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an efferent axon in the anterior lateral line nerve over time from its formation to the mature structure. This process includes axonogenesis and pathfinding of the efferent axons in the anterior lateral line nerve.","definition_xrefs":["PMID:15018940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"efferent axon development in a lateral line nerve","termid":"GO:0048894"},{"relation_name":"part_of","term_name":"anterior lateral line nerve development","termid":"GO:0048909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"efferent axon development in anterior lateral line nerve","termid":"GO:0048911"}


id: GO:0160128
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an inorganic ion by a channel that opens in response to a change in proton concentration (pH).","definition_xrefs":["PMID:17167423","PMID:29513651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated monoatomic ion channel activity","termid":"GO:0015276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"pH-gated monoatomic ion channel activity","secondary_identifiers":["Reactome:R-HSA-2671885"],"synonyms":[{"name":"acid-sensing ion channel activity","type":"related"},{"name":"proton-gated ion channel activity","type":"exact"}],"termid":"GO:0160128"}


id: GO:0140447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cleavage of a peptide bond in a precursor form of a cytokine, resulting in the mature (active) form of the cytokine.","definition_xrefs":["PMID:29247995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor ligand precursor processing","termid":"GO:0140448"},{"relation_name":"part_of","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"cytokine precursor processing","synonyms":[{"name":"interleukin maturation","type":"narrow"},{"name":"interleukin processing","type":"narrow"}],"termid":"GO:0140447"}


id: GO:0005053
data:
  {"annotated_genes":["SJAG_00326"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72408],"is_not":false,"summary":null,"term":"GO:0005053"}]},"cv_name":"molecular_function","definition":"Binding to a type 2 peroxisome targeting signal, a nonapeptide with a broad consensus sequence of (R/K)-(L/V/I)-(XXXXX)-(H/Q)-(L/A/F).","definition_xrefs":["PMID:11687502","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome targeting sequence binding","termid":"GO:0000268"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00326":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005048"],"is_obsolete":false,"name":"peroxisome matrix targeting signal-2 binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"PEX7","type":"narrow"},{"name":"PTS2 binding","type":"exact"},{"name":"PTS2 receptor","type":"exact"},{"name":"peroxisomal targeting signal 2 (PTS2) binding","type":"exact"},{"name":"peroxisome targeting signal-2 binding","type":"exact"},{"name":"peroxisome targeting signal-2 receptor","type":"narrow"}],"termid":"GO:0005053","terms_by_termid":{"GO:0005053":null}}


id: PBO:0068466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 43, pseudogene","termid":"PBO:0068466"}


id: PBO:0052840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 2-5, pseudogene","termid":"PBO:0052840"}


id: GO:0047728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carnitine + NAD+ = 3-dehydrocarnitine + H+ + NADH.","definition_xrefs":["RHEA:19265","EC:1.1.1.108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"carnitine 3-dehydrogenase activity","secondary_identifiers":["MetaCyc:CARNITINE-3-DEHYDROGENASE-RXN","KEGG_REACTION:R02395"],"synonyms":[{"name":"carnitine:NAD+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0047728"}


id: PBO:0004120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C3HC4 type zinc finger","termid":"PBO:0004120"}


id: MONDO:0024460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Herpesviridae infections (obsolete MONDO:0024460)","termid":"MONDO:0024460","xrefs":{"Monarch":{"xref_id":"0024460"}}}


id: MONDO:0859565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrioventricular septal defect","termid":"MONDO:0020290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrioventricular septal defect","secondary_identifiers":["UMLS:C1389018","OMIM:606215","MEDGEN:501123"],"termid":"MONDO:0859565","xrefs":{"Monarch":{"xref_id":"0859565"}}}


id: GO:0097496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A blood vessel lumenization process that occurs by blood vessel endothelial cells delaminating and aligning along the inner surface of an existing luminal space, extending the open ended lumen, and joining to other blood vessels to form a complete blood vessel.","definition_xrefs":["GOC:dgh","PMID:23698350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel lumenization","termid":"GO:0072554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel lumen ensheathment","termid":"GO:0097496"}


id: GO:0031766
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 3 galanin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galanin receptor binding","termid":"GO:0031763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 3 galanin receptor binding","synonyms":[{"name":"type 3 galanin receptor ligand","type":"narrow"}],"termid":"GO:0031766"}


id: PBO:0080331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 95 pseudogene","termid":"PBO:0080331"}


id: GO:0120121
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A three-part cytoskeletal structure in kinetoplastid species linking mitochondrial DNA organised in a kinetoplast through the mitochondrial membranes to the basal body.","definition_xrefs":["PMID:12802053","PMID:27168148","PMID:18059470","PMID:24821793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"tripartite attachment complex","synonyms":[{"name":"TAC","type":"related"}],"termid":"GO:0120121"}


id: PR:P87138
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC57A7.07c gene.","definition_xrefs":["UniProtKB:P87138","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C57A7.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.07c","synonyms":[{"name":"Spom972h-SPAC57A7.07c","type":"exact"}],"termid":"PR:P87138"}


id: PBO:0054759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2171","termid":"PBO:0054759"}


id: GO:0000837
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that recognizes and ubiquitinates membrane proteins with misfolded cytosolic domains during ER-associated protein degradation (ERAD). In S. cerevisiae, this complex contains the ubiquitin ligase Ssm4p/Doa10p.","definition_xrefs":["GOC:elh","PMID:16873066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER ubiquitin ligase complex","termid":"GO:0000835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005783","GO:0032991","GO:0005737","GO:0005789","GO:0005575"],"is_obsolete":false,"name":"Doa10p ubiquitin ligase complex","synonyms":[{"name":"Ssm4p ubiquitin ligase complex","type":"exact"}],"termid":"GO:0000837"}


id: MONDO:0005214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm that arises from the vulva. Representative examples include childhood botryoid-type embryonal rhabdomyosarcoma, alveolar soft part sarcoma, and leiomyosarcoma.","definition_xrefs":["NCIT:C40317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulva cancer","termid":"MONDO:0001528"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulva sarcoma","secondary_identifiers":["SCTID:254897006","UMLS:C0238525","DOID:2096","MEDGEN:65972"],"synonyms":[{"name":"mammalian vulva sarcoma","type":"exact"},{"name":"sarcoma of mammalian vulva","type":"exact"},{"name":"sarcoma of vulva","type":"exact"},{"name":"vulvar sarcoma","type":"exact"}],"termid":"MONDO:0005214","xrefs":{"Monarch":{"xref_id":"0005214"}}}


id: PBO:0003678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPT oligopeptide transporter family Isp4","termid":"PBO:0003678"}


id: PBO:0072880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBDS pseudogene 1","termid":"PBO:0072880"}


id: PBO:0078315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta constant","termid":"PBO:0078315"}


id: GO:0009435
data:
  {"annotated_genes":["SJAG_02618","SJAG_04693","SJAG_01500","SJAG_03298","SJAG_02889"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76520,79428,115079],"is_not":false,"summary":null,"term":"GO:0009435"},{"annotations":[72564,81860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide (NAD+), a coenzyme that interconverts with its reduced form, NADH, in many redox and catabolic reactions. NAD+ is derived from various sources including vitamin B3.","definition_xrefs":["PMID:28648096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide biosynthetic process","termid":"GO:0019359"},{"relation_name":"is_a","term_name":"NAD+ metabolic process","termid":"GO:0019674"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01500":null,"SJAG_02618":null,"SJAG_02889":null,"SJAG_03298":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"NAD+ biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006736"],"synonyms":[{"name":"NAD (oxidized) biosynthesis","type":"exact"},{"name":"NAD (oxidized) biosynthetic process","type":"exact"},{"name":"NAD (reduced) biosynthesis","type":"exact"},{"name":"NAD (reduced) biosynthetic process","type":"exact"},{"name":"NAD anabolism","type":"exact"},{"name":"NAD biosynthesis","type":"exact"},{"name":"NAD biosynthetic process","type":"exact"},{"name":"NAD formation","type":"exact"},{"name":"NAD synthesis","type":"exact"},{"name":"NADH biosynthesis","type":"exact"},{"name":"NADH biosynthetic process","type":"exact"},{"name":"nicotinamide adenine dinucleotide biosynthesis","type":"exact"},{"name":"nicotinamide adenine dinucleotide biosynthetic process","type":"exact"},{"name":"oxidized NAD biosynthesis","type":"exact"},{"name":"oxidized NAD biosynthetic process","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide biosynthesis","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide biosynthetic process","type":"exact"},{"name":"reduced NAD biosynthesis","type":"exact"},{"name":"reduced NAD biosynthetic process","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide biosynthesis","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide biosynthetic process","type":"exact"}],"termid":"GO:0009435","terms_by_termid":{"GO:0009435":null,"GO:0034355":null}}


id: GO:1903074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a TRAIL death-inducing signaling complex.","definition_xrefs":["GOC:TermGenie","GOC:bf","GO_REF:0000079","GOC:PARL","PMID:21785459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"death-inducing signaling complex assembly","termid":"GO:0071550"},{"relation_name":"part_of","term_name":"TRAIL-activated apoptotic signaling pathway","termid":"GO:0036462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0023052","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"TRAIL death-inducing signaling complex assembly","synonyms":[{"name":"TRAIL DISC assembly","type":"exact"},{"name":"TRAIL DISC formation","type":"exact"},{"name":"TRAIL death-inducing signaling complex formation","type":"exact"},{"name":"TRAIL death-inducing signalling complex assembly","type":"exact"},{"name":"TRAIL death-inducing signalling complex formation","type":"exact"}],"termid":"GO:1903074"}


id: PBO:0081707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 627","termid":"PBO:0081707"}


id: GO:0009996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from adopting a specific cell fate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate commitment","termid":"GO:0010454"},{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"negatively_regulates","term_name":"cell fate specification","termid":"GO:0001708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell fate specification","synonyms":[{"name":"down regulation of cell fate specification","type":"exact"},{"name":"down-regulation of cell fate specification","type":"exact"},{"name":"downregulation of cell fate specification","type":"exact"},{"name":"inhibition of cell fate specification","type":"narrow"},{"name":"suppression of cell fate","type":"exact"}],"termid":"GO:0009996"}


id: PBO:0049800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex P5B","termid":"PBO:0049800"}


id: GO:1902229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage.","definition_xrefs":["PMID:15314165","GOC:mtg_apoptosis","GOC:rl","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:0008630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of intrinsic apoptotic signaling pathway in response to DNA damage","synonyms":[{"name":"regulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"}],"termid":"GO:1902229"}


id: GO:1903385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of homophilic cell adhesion.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:als","PMID:21724833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"regulates","term_name":"homophilic cell adhesion via plasma membrane adhesion molecules","termid":"GO:0007156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of homophilic cell adhesion","termid":"GO:1903385"}


id: PBO:0030601
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_isoleucine_import","termid":"PBO:0030601"}


id: GO:0015052
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with epinephrine or norepinephrine to initiate a change in cell activity via activation of a G protein, with pharmacological characteristics of beta3-adrenergic receptors.","definition_xrefs":["GOC:mah","IUPHAR_GPCR:1274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-adrenergic receptor activity","termid":"GO:0004939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"beta3-adrenergic receptor activity","synonyms":[{"name":"beta3 adrenoceptor","type":"exact"}],"termid":"GO:0015052"}


id: PBO:0043441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 1","termid":"PBO:0043441"}


id: FYPO:0008086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagic degradation of the nucleus during nitrogen starvation is abolished .","definition_xrefs":["PMID:37191320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleophagy","termid":"FYPO:0008085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished nucleophagy during nitrogen starvation","termid":"FYPO:0008086"}


id: GO:0032144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric protein complex that possesses 4-aminobutyrate transaminase activity.","definition_xrefs":["PMID:15528998","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"4-aminobutyrate transaminase complex","synonyms":[{"name":"ABAT complex","type":"exact"},{"name":"GABA transaminase complex","type":"exact"},{"name":"GABA-T complex","type":"exact"}],"termid":"GO:0032144"}


id: PBO:0038421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APOBEC1 complementation factor","termid":"PBO:0038421"}


id: GO:0062026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the rate, frequency or extent of SCF-dependent proteasomal ubiquitin-dependent protein catabolic process, the chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by an SCF (Skp1/Cul1/F-box protein) complex, and mediated by the proteasome.","definition_xrefs":["PMID:28007894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0032435"},{"relation_name":"is_a","term_name":"regulation of SCF-dependent proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0062025"},{"relation_name":"negatively_regulates","term_name":"SCF-dependent proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0031146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process","termid":"GO:0062026"}


id: GO:0043571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in sustaining CRISPR repeat clusters, including capture of new spacer elements, expansion or contraction of clusters, propagation of the leader sequence and repeat clusters within a genome, transfer of repeat clusters and CRISPR-associated (cas) genes to new genomes, transcription of the CRISPR repeat arrays into RNA and processing, and interaction of CRISPR/cas loci with the host genome. CRISPR (clustered regularly interspaced short palindromic repeat) elements are a family of sequence elements containing multiple direct repeats of 24-48 bp with weak dyad symmetry which are separated by regularly sized nonrepetitive spacer sequences.","definition_xrefs":["PMID:16292354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of DNA repeat elements","termid":"GO:0043570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"maintenance of CRISPR repeat elements","synonyms":[{"name":"CRISPR element metabolic process","type":"related"},{"name":"CRISPR element metabolism","type":"related"},{"name":"maintenance of clustered regularly interspaced short palindromic repeat elements","type":"exact"}],"termid":"GO:0043571"}


id: PBO:0050746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 8","termid":"PBO:0050746"}


id: MONDO:0003115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the subglottic area.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"},{"relation_name":"is_a","term_name":"benign neoplasm of subglottis","termid":"MONDO:0021530"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subglottic hemangioma","secondary_identifiers":["DOID:472","UMLS:C1336518","NCIT:C6026","MEDGEN:234907"],"synonyms":[{"name":"angioma of subglottis","type":"exact"},{"name":"angioma of the subglottis","type":"exact"},{"name":"hemangioma of subglottis","type":"exact"},{"name":"hemangioma of the subglottis","type":"exact"},{"name":"subglottic angioma","type":"exact"},{"name":"subglottic hemangioma","type":"exact"},{"name":"subglottis angioma","type":"exact"},{"name":"subglottis hemangioma","type":"exact"}],"termid":"MONDO:0003115","xrefs":{"Monarch":{"xref_id":"0003115"}}}


id: PR:O94695
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pet2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transporter C83.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.11","synonyms":[{"name":"Spom972h-pet2","type":"exact"}],"termid":"PR:O94695"}


id: SO:0001188
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence consisting of nucleobases attached to a repeating unit made of 'locked' deoxyribose rings connected to a phosphate backbone. The deoxyribose unit's conformation is 'locked' by a 2'-C,4'-C-oxymethylene link.","definition_xrefs":["CHEBI:48010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic_acid","termid":"SO:0000348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LNA","termid":"SO:0001188"}


id: PBO:0011451
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no annotated human ortholog, is pseudogene in human, activity present in mice","termid":"PBO:0011451"}


id: GO:0009030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + thiamine phosphate = ADP + H+ + thiamine diphosphate.","definition_xrefs":["RHEA:15913","EC:2.7.4.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"thiamine-phosphate kinase activity","secondary_identifiers":["KEGG_REACTION:R00617","MetaCyc:THI-P-KIN-RXN"],"synonyms":[{"name":"ATP:thiamine-phosphate phosphotransferase activity","type":"related"},{"name":"thiamin monophosphatase activity","type":"related"},{"name":"thiamin monophosphokinase activity","type":"related"},{"name":"thiamin phosphate kinase activity","type":"exact"},{"name":"thiamin-monophosphate kinase activity","type":"related"},{"name":"thiamin-phosphate kinase activity","type":"exact"},{"name":"thiamine-monophosphate kinase activity","type":"related"}],"termid":"GO:0009030"}


id: MONDO:1010419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narcolepsy that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"narcolepsy, non-human animal","termid":"MONDO:1010003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"narcolepsy, domestic cat","secondary_identifiers":["OMIA:000703-9685"],"termid":"MONDO:1010419","xrefs":{"Monarch":{"xref_id":"1010419"}}}


id: MONDO:0035451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete left sided atrial isomerism (obsolete MONDO:0035451)","secondary_identifiers":["Orphanet:566862"],"termid":"MONDO:0035451","xrefs":{"Monarch":{"xref_id":"0035451"}}}


id: GO:0010181
data:
  {"annotated_genes":["SJAG_01881","SJAG_04054","SJAG_03485","SJAG_00203","SJAG_00972","SJAG_05015","SJAG_04042","SJAG_04265","SJAG_00707","SJAG_04627","SJAG_01668","SJAG_02697","SJAG_05027","SJAG_04459","SJAG_01693","SJAG_04270","SJAG_02142"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57516,59963,60108,61179,63813,65178,65972,66880,68856,71018,74482,76317,78008,79005,80105,80845,91248],"is_not":false,"summary":null,"term":"GO:0010181"}]},"cv_name":"molecular_function","definition":"Binding to flavin mono nucleotide. Flavin mono nucleotide (FMN) is the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleotide binding","termid":"GO:0032553"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00203":null,"SJAG_00707":null,"SJAG_00972":null,"SJAG_01668":null,"SJAG_01693":null,"SJAG_01881":null,"SJAG_02142":null,"SJAG_02697":null,"SJAG_03485":null,"SJAG_04042":null,"SJAG_04054":null,"SJAG_04265":null,"SJAG_04270":null,"SJAG_04459":null,"SJAG_04627":null,"SJAG_05015":null,"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"FMN binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"flavin mononucleotide binding","type":"exact"}],"termid":"GO:0010181","terms_by_termid":{"GO:0010181":null}}


id: GO:1900429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of filamentous growth","termid":"GO:0060258"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900428"},{"relation_name":"negatively_regulates","term_name":"filamentous growth of a population of unicellular organisms","termid":"GO:0044182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of filamentous growth of a population of unicellular organisms","synonyms":[{"name":"down regulation of filamentous growth of a population of unicellular organisms","type":"exact"},{"name":"down-regulation of filamentous growth of a population of unicellular organisms","type":"exact"},{"name":"downregulation of filamentous growth of a population of unicellular organisms","type":"exact"},{"name":"inhibition of filamentous growth of a population of unicellular organisms","type":"narrow"}],"termid":"GO:1900429"}


id: PBO:0040932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 3","termid":"PBO:0040932"}


id: GO:0031208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a POZ (poxvirus and zinc finger) domain of a protein, a protein-protein interaction domain found in many transcription factors.","definition_xrefs":["PMID:7958847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"POZ domain binding","synonyms":[{"name":"BTB domain","type":"exact"},{"name":"broad-complex, tramtrack, and bric-a-brac domain binding","type":"exact"}],"termid":"GO:0031208"}


id: PBO:0051004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin (CD79A) binding protein 1 pseudogene 1","termid":"PBO:0051004"}


id: GO:0019111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrol + X-SO3(-) = HX + phenanthrylsulfate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrol sulfotransferase activity (obsolete GO:0019111)","synonyms":[{"name":"phenanthrol sulphotransferase activity","type":"exact"}],"termid":"GO:0019111"}


id: PBO:0060655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCOR1 pseudogene 4","termid":"PBO:0060655"}


id: GO:0016626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces an acceptor other than NAD, NADP, oxygen, an iron-sulfur protein, disulphide or a cytochrome.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the aldehyde or oxo group of donors, other acceptors (obsolete GO:0016626)","synonyms":[{"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, other acceptors","type":"exact"}],"termid":"GO:0016626"}


id: MONDO:0019938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anorectal malformation","secondary_identifiers":["icd11.foundation:942572025","MESH:C537771","GARD:19351","ICD9:751.5","SCTID:33225004","Orphanet:96346"],"termid":"MONDO:0019938","xrefs":{"Monarch":{"xref_id":"0019938"}}}


id: PBO:0078364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (TTC) 8-2","termid":"PBO:0078364"}


id: MONDO:0005895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parasitic infection caused by trematodes of the Paragonimus genus. Humans are infected from ingestion of raw or undercooked food. It results in chronic lung infection and eosinophilia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paragonimiasis","secondary_identifiers":["NCIT:C84995","Orphanet:658913","icd11.foundation:1422824299","ICD9:121.2","GARD:9815","DOID:10699","ICD10CM:B66.4","UMLS:C0030424","EFO:0007418","SCTID:30369007","MEDGEN:14603","MESH:D010237"],"synonyms":[{"name":"Paragonimus westermani caused disease or disorder","type":"exact"},{"name":"Paragonimus westermani disease or disorder","type":"exact"},{"name":"Paragonimus westermani infection","type":"related"},{"name":"Paragonimus westermani infectious disease","type":"exact"},{"name":"infection by Paragonimus","type":"exact"},{"name":"lung fluke disease","type":"exact"},{"name":"lung fluke infection","type":"exact"},{"name":"pulmonary paragonimiasis","type":"exact"}],"termid":"MONDO:0005895","xrefs":{"Monarch":{"xref_id":"0005895"}}}


id: GO:0008242
data:
  {"annotated_genes":["SJAG_03316","SJAG_01612"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75521,80350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036374"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of non-standard peptide bonds releasing substituted amino acids such as pyroglutamate or cleave isopeptide bonds, such as many deubiquitinating enzymes.","definition_xrefs":["PMID:9920379","PMID:20157488","EC:3.4.19.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01612":null,"SJAG_03316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0008233","GO:0140096","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"omega peptidase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"peptidase activity, acting on peptides containing modified amino acids","type":"related"}],"termid":"GO:0008242","terms_by_termid":{"GO:0036374":null}}


id: PBO:0064071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 105","termid":"PBO:0064071"}


id: PBO:0051526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor like 2","termid":"PBO:0051526"}


id: PBO:0085990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for respiratory growth; YDL237W is not an essential gene","termid":"PBO:0085990"}


id: GO:0009034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tryptophan + H2O = indole + NH4 + pyruvate.","definition_xrefs":["RHEA:19553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tryptophanase activity","secondary_identifiers":["KEGG_REACTION:R00673","EC:4.1.99.1","MetaCyc:TRYPTOPHAN-RXN"],"synonyms":[{"name":"L-tryptophan indole-lyase (deaminating) activity","type":"related"},{"name":"L-tryptophan indole-lyase (deaminating; pyruvate forming) activity","type":"related"},{"name":"L-tryptophan indole-lyase activity","type":"related"},{"name":"L-tryptophanase activity","type":"related"},{"name":"TNase activity","type":"related"},{"name":"tryptophan catabolic process, using tryptophanase","type":"related"},{"name":"tryptophan catabolism, using tryptophanase","type":"related"}],"termid":"GO:0009034"}


id: PR:O74329
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S29 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02488","PRO:DNx","PANTHER:PTHR12010:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S29 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.09","secondary_identifiers":["UniProtKB:O74329"],"synonyms":[{"name":"Spom972h-RPS29","type":"exact"}],"termid":"PR:O74329"}


id: GO:0003096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of sodium ions (Na+) by the renal system.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process","termid":"GO:0003014"},{"relation_name":"is_a","term_name":"sodium ion transport","termid":"GO:0006814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"renal sodium ion transport","termid":"GO:0003096"}


id: PBO:0090914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Sak1","termid":"PBO:0090914"}


id: MONDO:0019389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete X-linked recessive intellectual disability-macrocephaly-ciliary dysfunction syndrome (obsolete MONDO:0019389)","secondary_identifiers":["Orphanet:83648"],"termid":"MONDO:0019389","xrefs":{"Monarch":{"xref_id":"0019389"}}}


id: GO:0038108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by leptin binding to its receptor on the surface of a cell, which reduces appetite, the desire or physical craving for food.","definition_xrefs":["GOC:vk","PMID:19150989","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of appetite","termid":"GO:0032099"},{"relation_name":"is_a","term_name":"leptin-mediated signaling pathway","termid":"GO:0033210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of appetite by leptin-mediated signaling pathway","synonyms":[{"name":"inhibition of appetite by leptin signaling","type":"exact"},{"name":"negative regulation of appetite by leptin-mediated signalling pathway","type":"exact"},{"name":"reduction of appetite by leptin-mediated signaling","type":"exact"},{"name":"suppression of appetite by leptin-mediated signaling pathway","type":"exact"}],"termid":"GO:0038108"}


id: PR:000024857
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteolytic cleavage product that is derived from P-factor precursor. In Schizosaccharomyces pombe 972h- the sequence is SYADFLRAYHSWNTFVNPDRPNL, corresponding to amino acids 100-122 of UniProtKB:Q09180-1.","definition_xrefs":["PRO:MSY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"map2/Clv:P-factor-like2","pombase_gene_id":"SPCC1795.06","synonyms":[{"name":"PomBase_original_PRO_term_name: P-factor-like 2","type":"exact"},{"name":"map2/Clv:P-factor-like2","type":"exact"}],"termid":"PR:000024857"}


id: PBO:0088837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex kleisin subunit Rad21","termid":"PBO:0088837"}


id: MONDO:0004880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disease in which the causes of the disease is a perturbation of the lower digestive tract leading to its dysfunction.","definition_xrefs":["MONDO:patterns/disease_by_dysfunctional_structure"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"bowel dysfunction","secondary_identifiers":["MEDGEN:384468","ICD9:564.9","DOID:9779","SCTID:235594008","UMLS:C2004461"],"synonyms":[{"name":"disease of lower digestive tract","type":"exact"},{"name":"lower digestive tract disease","type":"exact"}],"termid":"MONDO:0004880","xrefs":{"Monarch":{"xref_id":"0004880"}}}


id: GO:0008349
data:
  {"annotated_genes":["SJAG_03384"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102828],"is_not":false,"summary":null,"term":"GO:0008349"}]},"cv_name":"molecular_function","definition":"Catalysis of the phosphorylation of serine and threonine residues in a mitogen-activated protein kinase kinase kinase (MAPKKK), resulting in activation of MAPKKK. MAPKKK signaling pathways relay, amplify and integrate signals from the plasma membrane to the nucleus in response to a diverse range of extracellular stimuli.","definition_xrefs":["PMID:11790549","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03384":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016301","GO:0003824","GO:0016740","GO:0004672"],"is_obsolete":false,"name":"MAP kinase kinase kinase kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-936991","Reactome:R-HSA-177692","Reactome:R-HSA-9645442"],"synonyms":[{"name":"MAP4K activity","type":"exact"},{"name":"MAPKKKK","type":"exact"}],"termid":"GO:0008349","terms_by_termid":{"GO:0008349":null}}


id: GO:0007223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of non-canonical Wnt signaling in which Wnt binding to its receptor on the surface of a target cell leads to an increase in intracellular calcium and activation of protein kinase C (PKC).","definition_xrefs":["PMID:37804416","PMID:11532397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-canonical Wnt signaling pathway","termid":"GO:0035567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Wnt signaling pathway, calcium modulating pathway","secondary_identifiers":["Reactome:R-HSA-4086398"],"synonyms":[{"name":"Wnt receptor signaling pathway, calcium modulating pathway","type":"exact"},{"name":"Wnt-activated signaling pathway, calcium modulating pathway","type":"exact"},{"name":"frizzled-2 signaling pathway","type":"narrow"},{"name":"frizzled-2 signalling pathway","type":"narrow"},{"name":"non-canonical Wnt signaling pathway","type":"broad"}],"termid":"GO:0007223"}


id: PBO:0045714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 2","termid":"PBO:0045714"}


id: PBO:0036112
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_acetylation_during_vegetative_growth","termid":"PBO:0036112"}


id: PR:Q9Y7S5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC569.06 gene.","definition_xrefs":["UniProtKB:Q9Y7S5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C569.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC569.06","synonyms":[{"name":"Spom972h-SPCC569.06","type":"exact"}],"termid":"PR:Q9Y7S5"}


id: MONDO:0009879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Short stature due to growth hormone qualitative anomaly is characterized by growth retardation and short stature (despite the presence of normal or slightly elevated levels of immunoreactive growth hormone, GH), low concentrations of insulin-like growth factor-I (IGF-I) and a significant increase in growth rate following recombinant GH therapy. Prevalence is unknown but only a few cases have been reported in the literature. The syndrome is caused by various mutations in the GH1 gene (17q22-q24) that result in structural GH anomalies and a biologically inactive molecule. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated congenital growth hormone deficiency","termid":"MONDO:0000050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"short stature due to growth hormone qualitative anomaly","secondary_identifiers":["icd11.foundation:1665498704","UMLS:C1849779","MESH:C537505","GARD:408","OMIM:262650","MEDGEN:340412"],"synonyms":[{"name":"Biodefective Growth hormone","type":"related"},{"name":"KOWARSKI syndrome","type":"related"},{"name":"Kowarski syndrome","type":"exact"},{"name":"pituitary dwarfism with normal immunoreactive Growth hormone and Low Somatomedin","type":"related"}],"termid":"MONDO:0009879","xrefs":{"Monarch":{"xref_id":"0009879"}}}


id: PBO:0002160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase regulatory subunit Cgs1","termid":"PBO:0002160"}


id: GO:0070187
data:
  {"annotated_genes":["SJAG_03685","SJAG_02194","SJAG_01864","SJAG_03092","SJAG_01378","SJAG_01777"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[81639,91633,93720,96988,101638,117942],"is_not":false,"summary":null,"term":"GO:0070187"}]},"cv_name":"cellular_component","definition":"A nuclear telomere cap complex that is formed by the association of telomeric ssDNA- and dsDNA-binding proteins with telomeric DNA, and is involved in telomere protection and recruitment of telomerase. The complex is known to contain TERF1, TERF2, POT1, RAP1, TINF2 and ACD in mammalian cells, and Pot1, Tpz1, Rap1, Rif1, Rif2 and Taz1 in Saccharomyces. Taz1 and Rap1 (or their mammalian equivalents) form a dsDNA-binding subcomplex, Pot1 and Tpz1 form an ssDNA-binding subcomplex, and the two subcomplexes are bridged by Poz1, which acts as an effector molecule along with Ccq1.","definition_xrefs":["PMID:18828880","GOC:mah","GOC:expert_mf","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear telomere cap complex","termid":"GO:0000783"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01378":null,"SJAG_01777":null,"SJAG_01864":null,"SJAG_02194":null,"SJAG_03092":null,"SJAG_03685":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"shelterin complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Pot1 complex","type":"exact"},{"name":"Pot1-Tpz1 complex","type":"exact"},{"name":"telosome","type":"exact"}],"termid":"GO:0070187","terms_by_termid":{"GO:0070187":null}}


id: PBO:0011444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (pseudouridine) methyltransferase Mra1","termid":"PBO:0011444"}


id: PBO:0047187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 204 member C, pseudogene","termid":"PBO:0047187"}


id: PBO:0108776
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"named from budding yeast ortholog","termid":"PBO:0108776"}


id: GO:0018636
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrene + O2 + NADH + H+ = H2O + NAD+ + phenanthrene-9,10-oxide.","definition_xrefs":["UM-BBD_reactionID:r0495","PMID:1599252"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene 9,10-monooxygenase activity (obsolete GO:0018636)","termid":"GO:0018636"}


id: PBO:0030555
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_lysine_import","termid":"PBO:0030555"}


id: MONDO:0010768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mixed germ cell/sex cord-stromal tumor characterized by the presence of large germ cells which resemble seminoma cells and small cells which resemble Sertoli or granulosa cells. It occurs in the testis and the ovary and is identified in children and adults. It is often associated with gonadal dysgenesis and abnormal karyotype.","definition_xrefs":["NCIT:C3754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system cancer","termid":"MONDO:0002149"},{"relation_name":"is_a","term_name":"gonadal disorder","termid":"MONDO:0002259"},{"relation_name":"is_a","term_name":"mixed germ cell-sex cord-stromal tumor","termid":"MONDO:0002478"},{"relation_name":"is_a","term_name":"blastoma","termid":"MONDO:0005565"},{"relation_name":"is_a","term_name":"malignant mixed neoplasm","termid":"MONDO:0005853"},{"relation_name":"is_a","term_name":"sex cord-stromal tumor","termid":"MONDO:0006055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"gonadoblastoma","secondary_identifiers":["ICDO:9073/1","ONCOTREE:OGBL","UMLS:C0206661","DOID:3301","MEDGEN:104912","MESH:D018238"],"synonyms":[{"name":"gonad blastoma","type":"exact"},{"name":"gonadoblastoma","type":"exact"}],"termid":"MONDO:0010768","xrefs":{"Monarch":{"xref_id":"0010768"}}}


id: PBO:0045206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C2","termid":"PBO:0045206"}


id: MONDO:0013434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the CCDC39 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 14","secondary_identifiers":["OMIM:613807","NCIT:C148370","DOID:0110598","UMLS:C3151136","MEDGEN:462486","GARD:15713"],"synonyms":[{"name":"CCDC39 primary ciliary dyskinesia","type":"exact"},{"name":"CILD14","type":"exact"},{"name":"ciliary dyskinesia, primary, 14","type":"related"},{"name":"ciliary dyskinesia, primary, 14, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 14","type":"exact"},{"name":"primary ciliary dyskinesia 14","type":"exact"},{"name":"primary ciliary dyskinesia 14 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in CCDC39","type":"exact"},{"name":"primary ciliary dyskinesia type 14","type":"exact"}],"termid":"MONDO:0013434","xrefs":{"Monarch":{"xref_id":"0013434"}}}


id: MONDO:0007975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"meralgia paresthetica","termid":"MONDO:0023757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"meralgia paraesthetica, familial","secondary_identifiers":["OMIM:156220","MESH:C563590","UMLS:C1835026","MEDGEN:322555"],"synonyms":[{"name":"meralgia paraesthetica, familial","type":"exact"}],"termid":"MONDO:0007975","xrefs":{"Monarch":{"xref_id":"0007975"}}}


id: MONDO:0010550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked Charcot-Marie-Tooth disease type 2 is a rare, genetic, peripheral sensorimotor neuropathy characterized by an X-linked recessive inheritance pattern and the infantile- to childhood-onset of progressive, distal muscle weakness and atrophy (more prominent in the lower extremities than in the upper extremities), pes cavus, and absent tendon reflexes. Sensory impairment and intellectual disability has been reported in some individuals.","definition_xrefs":["Orphanet:101076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type X","termid":"MONDO:0018994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease X-linked recessive 2","secondary_identifiers":["MEDGEN:336803","MESH:C535302","OMIM:302801","UMLS:C1844873","DOID:0110208","GARD:1243","SCTID:763457000"],"synonyms":[{"name":"CMTX 2","type":"exact"},{"name":"CMTX2","type":"exact"},{"name":"Charcot Marie Tooth disease X-linked recessive 2","type":"exact"},{"name":"Charcot-Marie-Tooth disease X-linked recessive type 2","type":"exact"},{"name":"Charcot-Marie-Tooth disease, X-linked recessive, 2","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy X-linked recessive 2","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, X-linked recessive, 2","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, X-linked recessive, 2, X-linked recessive","type":"exact"},{"name":"X-linked Charcot-Marie-Tooth disease type 2","type":"exact"}],"termid":"MONDO:0010550","xrefs":{"Monarch":{"xref_id":"0010550"}}}


id: MONDO:0011697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Waardenburg's syndrome characterized by pigmentary abnormalities of the hair, skin, and eyes, congenital sensorineural hearing loss, and absence of lateral displacement of the inner canthus of each eye that has material basis in variation in the chromosome region 8p23.","definition_xrefs":["PMID:20127975","DOID:0110951","PMID:11810298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome type 2","termid":"MONDO:0019517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Waardenburg syndrome type 2C","secondary_identifiers":["MEDGEN:335755","UMLS:C1847722","OMIM:606662","MESH:C564684","GARD:15396"],"synonyms":[{"name":"WS2C","type":"exact"},{"name":"Waardenburg syndrome type IIC","type":"exact"},{"name":"Waardenburg syndrome, type 2C","type":"related"}],"termid":"MONDO:0011697","xrefs":{"Monarch":{"xref_id":"0011697"}}}


id: PBO:0041921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonyl reductase 4","termid":"PBO:0041921"}


id: PBO:0049253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRTP1 antisense RNA 1","termid":"PBO:0049253"}


id: PBO:0044496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle regulator of NHEJ","termid":"PBO:0044496"}


id: MONDO:0016700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anaplastic ependymoma is a rare, malignant type of ependymoma that most often arises in the supratentorial region of the brain of children and young adults and that manifests with variable symptoms including headaches, nausea, vision impairment, memory loss and difficulty walking.","definition_xrefs":["Orphanet:251646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ependymal tumor","termid":"MONDO:0003266"},{"relation_name":"is_a","term_name":"anaplastic cancer","termid":"MONDO:0020633"},{"relation_name":"is_a","term_name":"grade III glioma","termid":"MONDO:0021640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"anaplastic ependymoma","secondary_identifiers":["DOID:5074","MedDRA:10014968","NCIT:C4049","NCIT:C6770","UMLS:C0280788","DOID:5889","ICDO:9392/3","ONCOTREE:APE","MEDGEN:128891","GARD:10634"],"synonyms":[{"name":"WHO grade III ependymal neoplasm","type":"exact"},{"name":"WHO grade III ependymal tumor","type":"exact"},{"name":"WHO grade III ependymal tumour","type":"exact"},{"name":"anaplastic ependymal neoplasm","type":"exact"},{"name":"anaplastic ependymal tumor","type":"exact"},{"name":"anaplastic ependymal tumour","type":"exact"},{"name":"anaplastic ependymoma","type":"exact"},{"name":"ependymal tumors","type":"broad"},{"name":"ependymal tumours","type":"broad"},{"name":"ependymoma, anaplastic, malignant","type":"exact"},{"name":"ependymoma, malignant","type":"exact"},{"name":"high-grade ependymoma","type":"exact"},{"name":"malignant ependymoma","type":"exact"},{"name":"undifferentiated ependymal neoplasm","type":"exact"},{"name":"undifferentiated ependymal tumor","type":"exact"},{"name":"undifferentiated ependymal tumour","type":"exact"},{"name":"undifferentiated ependymoma","type":"exact"}],"termid":"MONDO:0016700","xrefs":{"Monarch":{"xref_id":"0016700"}}}


id: MONDO:0017831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mild Canavan disease (CD) is a neurodegenerative disorder characterized by mild speech delay or motor development.","definition_xrefs":["Orphanet:314918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Canavan disease","termid":"MONDO:0010079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559"],"is_obsolete":false,"name":"mild Canavan disease","secondary_identifiers":["GARD:17438","MEDGEN:865564","UMLS:C4017127"],"synonyms":[{"name":"juvenile Canavan disease","type":"exact"}],"termid":"MONDO:0017831","xrefs":{"Monarch":{"xref_id":"0017831"}}}


id: GO:1900846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of naphtho-gamma-pyrone biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"regulates","term_name":"naphtho-gamma-pyrone biosynthetic process","termid":"GO:1900787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of naphtho-gamma-pyrone biosynthetic process","synonyms":[{"name":"regulation of naphtho-gamma-pyrone anabolism","type":"exact"},{"name":"regulation of naphtho-gamma-pyrone biosynthesis","type":"exact"},{"name":"regulation of naphtho-gamma-pyrone formation","type":"exact"},{"name":"regulation of naphtho-gamma-pyrone synthesis","type":"exact"},{"name":"regulation of naphtho-gamma-pyrones anabolism","type":"related"},{"name":"regulation of naphtho-gamma-pyrones biosynthesis","type":"related"},{"name":"regulation of naphtho-gamma-pyrones biosynthetic process","type":"related"},{"name":"regulation of naphtho-gamma-pyrones formation","type":"related"},{"name":"regulation of naphtho-gamma-pyrones synthesis","type":"related"}],"termid":"GO:1900846"}


id: RO:0002625
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitized_by","termid":"RO:0002445"},{"relation_name":"is_a","term_name":"visited_by","termid":"RO:0002619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_eggs_laid_in_by","termid":"RO:0002625"}


id: PATO:0002237
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved backward or downward.","direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrorse","termid":"PATO:0002237"}


id: GO:0048538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic or lymphoid organ development","termid":"GO:0048534"},{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thymus development","termid":"GO:0048538"}


id: PBO:0085416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter for choline, ethanolamine, and carnitine; involved in the uptake of nitrogen mustard and the uptake of glycine betaine during hypersaline stress; co-regulated with phospholipid biosynthetic genes and negatively regulated by choline and myo-inositol","termid":"PBO:0085416"}


id: PBO:0086264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates ubiquitination of Rsp5p; has a WW domain consensus motif of PPPSY (residues 131-135) that mediates binding of Rsp5p to Ubp2p; contains an UBA domain; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0086264"}


id: GO:0140274
data:
  {"annotated_genes":["SJAG_01224","SJAG_00082","SJAG_03048","SJAG_01837","SJAG_04140","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100540],"is_not":false,"summary":null,"term":"GO:0140274"},{"annotations":[113187,91871,95690,104315,118685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[118688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904967"}]},"cv_name":"biological_process","definition":"The cell cycle process where kinetochore microtubule attachment defects are corrected.","definition_xrefs":["PMID:15525536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01224":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"repair of kinetochore microtubule attachment defect","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"correction of kinetochore microtubule attachment defects","type":"exact"},{"name":"repair of kinetochore microtubule attachment defects","type":"exact"}],"termid":"GO:0140274","terms_by_termid":{"GO:0140274":null,"GO:0140429":null,"GO:1904967":null}}


id: FYPO:0000171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which late endosome to vacuole transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vesicle-mediated transport during vegetative growth","termid":"FYPO:0000213"},{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal late endosome to vacuole transport","synonyms":[{"name":"abnormal late endosome to vacuole protein transport","type":"narrow"},{"name":"abnormal late endosome to vacuole transport during mitotic cell cycle","type":"related"},{"name":"abnormal late endosome to vacuole transport during vegetative growth","type":"exact"}],"termid":"FYPO:0000171"}


id: PBO:0001562
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.30","termid":"PBO:0001562"}


id: GO:0051823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synapse structural plasticity. Synapse structural plasticity is a type of cytoskeletal remodeling; this remodeling is induced by stimuli that can lead to long term potentiation and it can be activity-dependent or -independent. Examples of cytoskeletal changes include the formation of new spines and increase in spine size; this can be accompanied by the insertion of greater numbers of glutamate (or other neurotransmitter) receptors into the post-synaptic membrane.","definition_xrefs":["PMID:14976517","PMID:9884123","PMID:11063967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of synapse structural plasticity","synonyms":[{"name":"regulation of synaptic structural plasticity","type":"exact"}],"termid":"GO:0051823"}


id: PBO:0062841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex subunit pseudogene 7","termid":"PBO:0062841"}


id: PBO:0089349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase Slc1","termid":"PBO:0089349"}


id: PBO:0046607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 9","termid":"PBO:0046607"}


id: MONDO:0010138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypermetabolic syndrome caused by the elevation of thyroid hormone levels in the serum. Signs and symptoms include tachycardia, palpitations, tremor, weight loss, warm weather intolerance, and moist skin. Causes include Graves disease, toxic nodular goiter, toxic thyroid nodule, and lymphocytic thyroiditis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Graves disease","termid":"MONDO:0005364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"thyrotoxicosis","secondary_identifiers":["ICD9:242.80","ICD9:242.90","MEDGEN:11814","NCIT:C61469","DOID:7997","SCTID:90739004","MESH:D013971","ICD9:242","UMLS:C0040156","EFO:0009190","icd11.foundation:1470387017"],"synonyms":[{"name":"GRD","type":"related"},{"name":"GRD1","type":"related"},{"name":"Graves disease, susceptibility to, 1","type":"related"},{"name":"hyperthyroidism, autoimmune","type":"related"}],"termid":"MONDO:0010138","xrefs":{"Monarch":{"xref_id":"0010138"}}}


id: PBO:0046349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 7","termid":"PBO:0046349"}


id: GO:0120238
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The carbohydrate rich layer at the outermost periphery of a sperm cell.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycocalyx","termid":"GO:0030112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm glycocalyx","termid":"GO:0120238"}


id: PBO:0052718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 10","termid":"PBO:0052718"}


id: GO:1902617
data:
  {"annotated_genes":["SJAG_01973"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115737],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140114"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fluoride stimulus.","definition_xrefs":["GO_REF:0000071","GOC:kmv","GOC:TermGenie","PMID:8138152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fluoride","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902617","terms_by_termid":{"GO:0140114":null}}


id: PBO:0113001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of translation initiation factor eIF2B (eIF2Bα); guanine-nucleotide exchange factor for eIF2; mutations in eIF2Bα alter localization of eIF2B; activity regulated by phosphorylated eIF2; positive regulator of GCN4 expression; mutations in human ortholog EIF2B2 cause fatal brain disease childhood ataxia with central nervous system hypomyelination (CACH); human ortholog EIF2B1 can complement yeast null mutant","termid":"PBO:0113001"}


id: GO:2001005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pectin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of pectin catabolic process","termid":"GO:2001003"},{"relation_name":"positively_regulates","term_name":"pectin catabolic process","termid":"GO:0045490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of pectin catabolic process","synonyms":[{"name":"positive regulation of pectin breakdown","type":"exact"},{"name":"positive regulation of pectin catabolism","type":"exact"},{"name":"positive regulation of pectin degradation","type":"exact"}],"termid":"GO:2001005"}


id: PBO:0108686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS complex RabGEF subunit Vam6","termid":"PBO:0108686"}


id: PBO:0028916
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_cellular_response_to_oxidative_stress","termid":"PBO:0028916"}


id: PR:O94630
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arp1 gene.","definition_xrefs":["UniProtKB:O94630","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centractin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.12","synonyms":[{"name":"Spom972h-arp1","type":"exact"},{"name":"actin-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"actin-related protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94630"}


id: PBO:0027564
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_frequency_of_meiosis_II","termid":"PBO:0027564"}


id: SO:0000588
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A self spliced intron.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"ribozymic","termid":"SO:0001186"},{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autocatalytically_spliced_intron","synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:autocatalytically_spliced_intron","type":"exact"},{"name":"autocatalytically spliced intron","type":"exact"}],"termid":"SO:0000588"}


id: MONDO:0011167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus that has material basis in mutation of the locus at chromosome 18q21.","definition_xrefs":["DOID:0110745","PMID:9215667","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 6","secondary_identifiers":["MEDGEN:356143","UMLS:C1866041","MESH:C566603","OMIM:601941"],"synonyms":[{"name":"IDDM6","type":"exact"},{"name":"autoimmune thyroid disease, susceptibility to, 5","type":"related"},{"name":"diabetes mellitus, insulin-dependent, 6","type":"related"},{"name":"insulin-dependent diabetes mellitus 6","type":"exact"}],"termid":"MONDO:0011167","xrefs":{"Monarch":{"xref_id":"0011167"}}}


id: PBO:0056471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine adenosyltransferase 1A","termid":"PBO:0056471"}


id: GO:0000902
data:
  {"annotated_genes":["SJAG_00028","SJAG_00236","SJAG_03581","SJAG_00514","SJAG_02989","SJAG_04322","SJAG_02838","SJAG_03705","SJAG_01993","SJAG_02864","SJAG_00244","SJAG_01017","SJAG_03637","SJAG_02392","SJAG_04461","SJAG_00661","SJAG_04509","SJAG_00596","SJAG_02700","SJAG_00216","SJAG_00333","SJAG_02022","SJAG_02536","SJAG_04724","SJAG_04522","SJAG_01894","SJAG_02169","SJAG_01799","SJAG_04666","SJAG_00610","SJAG_03486","SJAG_02222","SJAG_00845","SJAG_01456","SJAG_01943"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91735,96473,97748],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0051519"},{"annotations":[95903,89747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042815"},{"annotations":[89912,108810,112740,119916,101659,118486,105420],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0051523"},{"annotations":[100201,94395,100895,100813,90120,116322],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904600"},{"annotations":[92598],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051517"},{"annotations":[109571,118592],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000784"},{"annotations":[107305,95625,102101],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000247"},{"annotations":[105633],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0061361"},{"annotations":[117050],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0051516"},{"annotations":[121546,121547],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0008360"},{"annotations":[115038,120819,93018,106476,97561,96479],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000100"},{"annotations":[94307,89756,104781,108063],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000769"}]},"cv_name":"biological_process","definition":"The developmental process in which the size or shape of a cell is generated and organized.","definition_xrefs":["GOC:dph","GOC:clt","GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00216":null,"SJAG_00236":null,"SJAG_00244":null,"SJAG_00333":null,"SJAG_00514":null,"SJAG_00596":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01017":null,"SJAG_01456":null,"SJAG_01799":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02022":null,"SJAG_02169":null,"SJAG_02222":null,"SJAG_02392":null,"SJAG_02536":null,"SJAG_02700":null,"SJAG_02838":null,"SJAG_02864":null,"SJAG_02989":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04461":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell morphogenesis","references_by_uniquename":{"GO_REF:0000107":null,"PMID:30664646":null},"secondary_identifiers":["GO:0045790","GO:0045791","GO:0007148"],"synonyms":[{"name":"cellular morphogenesis","type":"exact"}],"termid":"GO:0000902","terms_by_termid":{"GO:0008360":null,"GO:0042815":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null,"GO:0051523":null,"GO:0061361":null,"GO:1904600":null,"GO:2000100":null,"GO:2000247":null,"GO:2000769":null,"GO:2000784":null}}


id: PBO:0085753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase; required for signal transduction during entry into meiosis; promotes the formation of the Ime1p-Ume6p complex by phosphorylating Ime1p and Ume6p; shares similarity with mammalian glycogen synthase kinase 3-beta; protein abundance increases in response to DNA replication stress; RIM11 has a paralog, MRK1, that arose from the whole genome duplication","termid":"PBO:0085753"}


id: MONDO:0016460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polyvalvular heart disease syndrome is a recently described syndrome characterized by the combination of polyvalvular heart disease, short stature, facial anomalies and intellectual deficit.","definition_xrefs":["Orphanet:228410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"polyvalvular heart disease syndrome","secondary_identifiers":["MEDGEN:1376905","GARD:20594","UMLS:C4509918","SCTID:723448007"],"synonyms":[{"name":"PHD syndrome","type":"exact"}],"termid":"MONDO:0016460","xrefs":{"Monarch":{"xref_id":"0016460"}}}


id: PBO:0060504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 4 pseudogene 3","termid":"PBO:0060504"}


id: PBO:0034139
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_homoplasy_relationship_with","termid":"PBO:0034139"}


id: MONDO:0015254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious disease caused by parasitic trematodes of the genus Schistosoma that colonize human blood vessels and release eggs that can cause granulomatous reactions leading to acute (swimmer's itch or acute schistosomiasis syndrome) or chronic disease. Depending on where the eggs lodge, manifestations of chronic schistosomiasis can include diarrhea, abdominal pain, loss of appetite, anemia (intestines), hepatosplenism, periportal fibrosis with portal hypertension (liver), urogenital inflammation and scarring, hematuria and dysuria (genitourinary system). Other patients may be asymptomatic.","definition_xrefs":["Orphanet:1247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schistosomiasis","secondary_identifiers":["MEDGEN:48573","UMLS:C0036323","DOID:1395","SCTID:10087007","MedDRA:10039603","icd11.foundation:1194562592","NCIT:C35000","MESH:D012552","ICD9:120.8","EFO:1001475","ICD9:120.9","GARD:9687"],"synonyms":[{"name":"Bilharzia","type":"exact"},{"name":"bilharziasis","type":"exact"},{"name":"schistosomiasis","type":"exact"},{"name":"snail fever","type":"exact"}],"termid":"MONDO:0015254","xrefs":{"Monarch":{"xref_id":"0015254"}}}


id: PBO:0004407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Pmh1","termid":"PBO:0004407"}


id: PBO:0047657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 9","termid":"PBO:0047657"}


id: PBO:0045713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 1","termid":"PBO:0045713"}


id: GO:0021589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the cerebellum. This process pertains to the physical shaping of a rudimentary structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills.","definition_xrefs":["GOC:dgh","ISBN:0838580343","GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"hindbrain structural organization","termid":"GO:0021577"},{"relation_name":"part_of","term_name":"cerebellum morphogenesis","termid":"GO:0021587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellum structural organization","synonyms":[{"name":"cerebellum structural organisation","type":"exact"}],"termid":"GO:0021589"}


id: GO:0005107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete GPI-linked ephrin (obsolete GO:0005107)","synonyms":[{"name":"GPI-linked ephrin","type":"exact"}],"termid":"GO:0005107"}


id: GO:0004983
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with neuropeptide Y to initiate a change in cell activity.","definition_xrefs":["PMID:9315606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"neuropeptide Y receptor activity","termid":"GO:0004983"}


id: PBO:0030478
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_glutamine_level","termid":"PBO:0030478"}


id: PBO:0113463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the GET complex; involved in insertion of  tail-anchored proteins proteins into the ER membrane; required for the retrieval of HDEL proteins from the Golgi to the ER in an ERD2 dependent fashion and for meiotic nuclear division; Get1p and Get2p form an aqueous channel for protein translocation and insertion into the membrane","termid":"PBO:0113463"}


id: PBO:0044493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 51 subfamily A member 1 pseudogene 1","termid":"PBO:0044493"}


id: FYPO:0001475
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle pole body is broken into fragments.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body morphology","termid":"FYPO:0001474"},{"relation_name":"is_a","term_name":"fragmented spindle pole body","termid":"FYPO:0006404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"fragmented mitotic spindle pole body","synonyms":[{"name":"fragmented mitotic SPB","type":"exact"},{"name":"fragmented spindle pole body during mitotic cell cycle","type":"exact"},{"name":"fragmented spindle pole body during vegetative growth","type":"exact"},{"name":"mitotic spindle pole body fragmentation","type":"exact"}],"termid":"FYPO:0001475"}


id: PBO:0064855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14C","termid":"PBO:0064855"}


id: GO:2001051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tendon cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of tendon cell differentiation","termid":"GO:2001049"},{"relation_name":"positively_regulates","term_name":"tendon cell differentiation","termid":"GO:0035990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tendon cell differentiation","synonyms":[{"name":"positive regulation of muscle attachment cell differentiation","type":"exact"},{"name":"positive regulation of tenocyte differentiation","type":"related"}],"termid":"GO:2001051"}


id: GO:1905181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of urease activity.","definition_xrefs":["PMID:16244137","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of urease activity (obsolete GO:1905181)","synonyms":[{"name":"regulation of urea amidohydrolase activity","type":"exact"}],"termid":"GO:1905181"}


id: PBO:0083456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene HAC1/YFL031W; YFL032W is not an essential gene","termid":"PBO:0083456"}


id: GO:0031653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any homeostatic process in which an organism releases excess heat to the environment, thereby lowering its internal temperature.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temperature homeostasis","termid":"GO:0001659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heat dissipation","termid":"GO:0031653"}


id: MONDO:0034216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid hormone resistance syndrome","termid":"MONDO:0001328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"resistance to thyroid hormone due to a mutation in thyroid hormone receptor alpha","secondary_identifiers":["MEDGEN:1830097","GARD:22275","Orphanet:566231","UMLS:C5680127"],"synonyms":[{"name":"resistance to thyroid hormone alpha","type":"exact"}],"termid":"MONDO:0034216","xrefs":{"Monarch":{"xref_id":"0034216"}}}


id: PBO:0017881
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"itsy bitsy phosphatase","termid":"PBO:0017881"}


id: PBO:0067763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 63","termid":"PBO:0067763"}


id: PBO:0029370
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0029370"}


id: PBO:0063735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin 1","termid":"PBO:0063735"}


id: MONDO:0030105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"galactosemia","termid":"MONDO:0018116"},{"relation_name":"is_a","term_name":"disorder of galactose and fructose metabolism","termid":"MONDO:0800152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"galactosemia 4","secondary_identifiers":["OMIM:618881","GARD:18005","DOID:0060969","Orphanet:570422","UMLS:C5394377","MEDGEN:1718159"],"synonyms":[{"name":"GALAC4","type":"exact"},{"name":"GALACTOSEMIA IV","type":"exact"},{"name":"GALM mutarotase deficiency","type":"related"},{"name":"Galactose Mutarotase Deficiency","type":"exact"},{"name":"galactosemia iv","type":"exact"}],"termid":"MONDO:0030105","xrefs":{"Monarch":{"xref_id":"0030105"}}}


id: PBO:0113376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative cysteine synthase; localized to the mitochondrial outer membrane; interacts with TCD1 and TCD2, likely forming a complex","termid":"PBO:0113376"}


id: MONDO:0003394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the dental pulp.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"is_a","term_name":"tooth disorder","termid":"MONDO:0006999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dental pulp disorder","secondary_identifiers":["ICD9:522.9","EFO:0009540","MESH:D003788","UMLS:C0011405","DOID:5330","NCIT:C34530","MEDGEN:8305","SCTID:57203004"],"synonyms":[{"name":"dental pulp disease","type":"exact"},{"name":"dental pulp disease or disorder","type":"exact"},{"name":"dental pulp disorder","type":"exact"},{"name":"disease of dental pulp","type":"exact"},{"name":"disease or disorder of dental pulp","type":"exact"},{"name":"disorder of dental pulp","type":"exact"},{"name":"disorder of pulp of tooth","type":"exact"},{"name":"pulp disorder","type":"exact"}],"termid":"MONDO:0003394","xrefs":{"Monarch":{"xref_id":"0003394"}}}


id: GO:0000208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a MAP kinase to the nucleus during osmolarity sensing.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK import into nucleus involved in osmosensory signaling pathway (obsolete GO:0000208)","synonyms":[{"name":"MAPK import into nucleus during osmolarity sensing","type":"exact"},{"name":"MAPK import into nucleus involved in osmosensory signalling pathway","type":"exact"},{"name":"nuclear translocation of MAPK during osmolarity sensing","type":"exact"},{"name":"nuclear translocation of MAPK involved in osmosensory signaling pathway","type":"narrow"},{"name":"nuclear translocation of MAPK involved in osmosensory signalling pathway","type":"narrow"},{"name":"osmolarity sensing, MAPK import into nucleus","type":"exact"},{"name":"osmolarity sensing, nuclear translocation of MAPK","type":"narrow"}],"termid":"GO:0000208"}


id: PBO:0060394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle organizing protein 2B","termid":"PBO:0060394"}


id: MONDO:1010529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, non-human animal","termid":"MONDO:1010037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, pig","secondary_identifiers":["OMIA:000197-9823"],"termid":"MONDO:1010529","xrefs":{"Monarch":{"xref_id":"1010529"}}}


id: GO:1903154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any glucose transmembrane transporter activity that is involved in glucose import into cell.","definition_xrefs":["GOC:TermGenie","ISBN:0-8249-3695-6","GO_REF:0000061","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete glucose transmembrane transporter activity involved in glucose import into cell (obsolete GO:1903154)","synonyms":[{"name":"galactose/glucose (methylgalactoside) porter activity involved in glucose import into cell","type":"related"},{"name":"glucose permease activity involved in glucose import into cell","type":"exact"},{"name":"glucose transmembrane transporter activity involved in glucose import into cell","type":"exact"},{"name":"lactose/glucose efflux transporter activity involved in glucose import into cell","type":"narrow"}],"termid":"GO:1903154"}


id: MONDO:0012685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bipolar disorder","termid":"MONDO:0004985"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major affective disorder 5","secondary_identifiers":["UMLS:C1970944","OMIM:611535","MESH:C567074","MEDGEN:372672"],"synonyms":[{"name":"MAFD5","type":"exact"},{"name":"MAJOR affective disorder 5","type":"related"},{"name":"bipolar affective disorder","type":"related"},{"name":"major affective disorder 5","type":"exact"}],"termid":"MONDO:0012685","xrefs":{"Monarch":{"xref_id":"0012685"}}}


id: MONDO:0009050
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88567],"is_not":false,"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"Cushing's syndrome due to abnormally high secretion of adrenocorticotropic hormone (ACTH) from the pituitary gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"functioning pituitary gland adenoma","termid":"MONDO:0003429"},{"relation_name":"is_a","term_name":"familial isolated pituitary adenoma","termid":"MONDO:0017824"},{"relation_name":"is_a","term_name":"ACTH-dependent Cushing syndrome","termid":"MONDO:0020528"},{"relation_name":"is_a","term_name":"adrenal gland neoplasm","termid":"MONDO:0021227"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"Cushing disease due to pituitary adenoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D047748","DOID:7004","NANDO:1200379","OMIM:219090","UMLS:C0221406","MESH:D049913","GARD:12867","icd11.foundation:380861892","Orphanet:96253","SCTID:254958004","NCIT:C113210","ICD10CM:E24.0","NANDO:2200350","MEDGEN:66381","NCIT:C7462","ICD10CM:D35.2","MedDRA:10035109"],"synonyms":[{"name":"ACTH producing pituitary adenoma","type":"exact"},{"name":"ACTH-secreting pituitary adenoma","type":"related"},{"name":"Corticotropinoma","type":"related"},{"name":"Cushing disease","type":"related"},{"name":"Cushing disease, pituitary","type":"exact"},{"name":"Cushing's disease","type":"related"},{"name":"PITA4","type":"exact"},{"name":"corticotroph adenoma","type":"related"},{"name":"corticotroph pituitary adenoma","type":"exact"},{"name":"pituitary adenoma 4, ACTH-secreting","type":"exact"},{"name":"pituitary adenoma 4, ACTH-secreting, somatic","type":"exact"},{"name":"pituitary adenoma, ACTH-secreting","type":"exact"},{"name":"pituitary corticotroph micro-adenoma","type":"exact"},{"name":"pituitary dependent Cushing syndrome","type":"exact"},{"name":"pituitary-dependent Cushing syndrome","type":"exact"}],"termid":"MONDO:0009050","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0009050"}}}


id: PBO:0028798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_replication_fork_arrest_at_rDNA_repeats","termid":"PBO:0028798"}


id: PBO:0079419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta pseudogene 2","termid":"PBO:0079419"}


id: PBO:0031292
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localization_phenotype","termid":"PBO:0031292"}


id: FYECO:0000011
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition pertaining to the presence of one or more substances in a limited amount.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical added or excluded","termid":"FYECO:0000059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping limited","termid":"FYECO:0000011"}


id: GO:0042020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-23 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-23 receptor activity","synonyms":[{"name":"IL-23 receptor activity","type":"exact"},{"name":"IL-23R","type":"exact"}],"termid":"GO:0042020"}


id: PBO:0056304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase 1","termid":"PBO:0056304"}


id: PBO:0045604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 15 (pseudogene)","termid":"PBO:0045604"}


id: PBO:0030848
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_translation","termid":"PBO:0030848"}


id: GO:1990100
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing homohexameric DNA helicase DnaB, and the DNA helicase loader DnaC. The helicase loader DnaC delivers DnaB to the chromosomal origin (oriC).","definition_xrefs":["PMID:20129058","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"primosome complex","termid":"GO:1990077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"DnaB-DnaC complex","synonyms":[{"name":"DnaB6-DnaC3 complex","type":"narrow"},{"name":"DnaB6-DnaC6 complex","type":"narrow"},{"name":"helicase-loading complex","type":"broad"}],"termid":"GO:1990100"}


id: PBO:0030203
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_multinucleate_vegetative_cell","termid":"PBO:0030203"}


id: MONDO:0012383
data:
  {"annotated_genes":["SJAG_04210"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88454],"is_not":false,"summary":null,"term":"MONDO:0012383"}]},"cv_name":"mondo","definition":"The primary immunodeficiency with natural-killer cell deficiency and adrenal insufficiency is characterized by a specific natural-killer (NK) cell deficiency and susceptibility to viral diseases. It has been described in four children from a large inbred kindred. Three out of the four children reported developed a viral illness. The mode of transmission is most likely autosomal recessive. The causative gene has been localized to within a 12-Mb region on chromosome 8p11.23-q11.21.","definition_xrefs":["Orphanet:75391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"primary immunodeficiency with natural-killer cell deficiency and adrenal insufficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:609981","SCTID:724275005","DOID:0111967","NANDO:2200771","NCIT:C123729","MEDGEN:351256","GARD:16695","MESH:C566492","UMLS:C1864947"],"synonyms":[{"name":"IMD54","type":"related"},{"name":"NKGCD","type":"related"},{"name":"immunodeficiency 54","type":"related"},{"name":"mini-chromosome maintenance 4","type":"exact"},{"name":"natural KILLER cell and glucocorticoid deficiency with DNA repair defect","type":"related"},{"name":"natural Killer cell deficiency, familial isolated","type":"related"},{"name":"primary immunodeficiency due to MCM4 deficiency","type":"exact"}],"termid":"MONDO:0012383","terms_by_termid":{"MONDO:0012383":null},"xrefs":{"Monarch":{"xref_id":"0012383"}}}


id: GO:0033506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucosinolates from other compounds including homomethionine.","definition_xrefs":["GOC:mah","MetaCyc:PWY-1187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosinolate biosynthetic process","termid":"GO:0019761"},{"relation_name":"is_a","term_name":"homomethionine metabolic process","termid":"GO:0033321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"glucosinolate biosynthetic process from homomethionine","synonyms":[{"name":"glucosinolate anabolism from homomethionine","type":"exact"},{"name":"glucosinolate biosynthesis from homomethionine","type":"exact"},{"name":"glucosinolate formation from homomethionine","type":"exact"},{"name":"glucosinolate synthesis from homomethionine","type":"exact"}],"termid":"GO:0033506"}


id: MONDO:0014908
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive primary microcephaly in which the cause of the disease is a mutation in the CIT gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 17, primary, autosomal recessive","secondary_identifiers":["GARD:16186","MEDGEN:934690","OMIM:617090","UMLS:C4310723","DOID:0070288"],"synonyms":[{"name":"CIT autosomal recessive primary microcephaly","type":"exact"},{"name":"MCPH17","type":"exact"},{"name":"autosomal recessive primary microcephaly caused by mutation in CIT","type":"exact"},{"name":"autosomal recessive primary microcephaly caused by mutation in cit","type":"exact"},{"name":"cit autosomal recessive primary microcephaly","type":"exact"},{"name":"microcephaly 17, primary, autosomal recessive","type":"exact"},{"name":"microcephaly 17, primary, autosomal recessive; MCPH17","type":"exact"}],"termid":"MONDO:0014908","xrefs":{"Monarch":{"xref_id":"0014908"}}}


id: MONDO:0001064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of otosalpingitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otosalpingitis","termid":"MONDO:0002172"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute eustachian salpingitis","secondary_identifiers":["DOID:10550","MEDGEN:509961","SCTID:194268005","ICD9:381.51","UMLS:C0155429"],"synonyms":[{"name":"acute eustachian tube salpingitis","type":"exact"},{"name":"acute otosalpingitis","type":"exact"},{"name":"otosalpingitis, acute","type":"exact"}],"termid":"MONDO:0001064","xrefs":{"Monarch":{"xref_id":"0001064"}}}


id: PBO:0061738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin and PC-esterase domain family member 2","termid":"PBO:0061738"}


id: GO:0008251
data:
  {"annotated_genes":["SJAG_04380","SJAG_04189"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052717"},{"annotations":[73379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043829"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a tRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine deaminase activity","termid":"GO:0004000"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04189":null,"SJAG_04380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0140101","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"tRNA-specific adenosine deaminase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-6782336","Reactome:R-HSA-6782311"],"synonyms":[{"name":"tRNA-adenosine deaminase activity","type":"exact"}],"termid":"GO:0008251","terms_by_termid":{"GO:0043829":null,"GO:0052717":null}}


id: PBO:0049212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor NMDA type subunit 3B","termid":"PBO:0049212"}


id: PBO:0046170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELFN1 antisense RNA 1","termid":"PBO:0046170"}


id: GO:0100032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates phospholipid biosynthetic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phospholipid biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100032)","termid":"GO:0100032"}


id: PBO:0057851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3162","termid":"PBO:0057851"}


id: GO:0018616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3,5-trihydroxytoluene + O2 = 2,4,6-trioxoheptanoate.","definition_xrefs":["UM-BBD_reactionID:r0093","PMID:1254564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"trihydroxytoluene dioxygenase activity","secondary_identifiers":["MetaCyc:R305-RXN"],"termid":"GO:0018616"}


id: GO:0015933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. An oxidoreductase which contains either flavin-adenine dinucleotide or flavin mononucleotide as a prosthetic group, utilizes either NADH or NADPH and transfers electrons to other electron transfer proteins.","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete flavin-containing electron transporter (obsolete GO:0015933)","synonyms":[{"name":"flavin-containing electron transporter","type":"exact"}],"termid":"GO:0015933"}


id: MONDO:0054588
data:
  {"annotated_genes":["SJAG_02536","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87336,87337],"is_not":false,"summary":null,"term":"MONDO:0054588"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome-like disorder with loose anagen hair","termid":"MONDO:0011899"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02536":null,"SJAG_03126":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Noonan syndrome-like disorder with loose anagen hair 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617506","DOID:0080693","UMLS:C4479577","MEDGEN:1376945","NCIT:C176940"],"synonyms":[{"name":"NSLH2","type":"related"},{"name":"Noonan syndrome-like disorder with loose anagen hair 2","type":"exact"}],"termid":"MONDO:0054588","terms_by_termid":{"MONDO:0054588":null},"xrefs":{"Monarch":{"xref_id":"0054588"}}}


id: PBO:0087593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ASTRA complex, involved in chromatin remodeling; telomere length regulator involved in the stability or biogenesis of PIKKs such as TORC1","termid":"PBO:0087593"}


id: PBO:0076964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFB induced factor homeobox 1 pseudogene 1","termid":"PBO:0076964"}


id: MOD:01689
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a carboxyl-terminal residue to an alpha-carboxyl (1-carboxyl) methyl ester.","definition_xrefs":["OMSSA:18","OMSSA:68","Unimod:34#C-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methylated residue","termid":"MOD:00393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"alpha-carboxyl methylated residue","synonyms":[{"name":"C1OMeRes","type":"exact"},{"name":"Methyl","type":"related"},{"name":"ctermpepmeester","type":"exact"},{"name":"ctermpepmethyl","type":"exact"}],"termid":"MOD:01689"}


id: PBO:0056159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MACROD2 intronic transcript 1","termid":"PBO:0056159"}


id: MONDO:0800487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any idiopathic generalized epilepsy syndrome that has a variable-age onset.","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic generalized epilepsy","termid":"MONDO:0005579"},{"relation_name":"is_a","term_name":"variable age epilepsy syndrome","termid":"MONDO:0100619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"variable-age onset idiopathic generalized epilepsy syndrome","termid":"MONDO:0800487","xrefs":{"Monarch":{"xref_id":"0800487"}}}


id: GO:0120273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of macromolecules to form a ciliary centrin arm, a rod-shaped protein complex containing Centrin4 protein that flanks the flagellum attachment zone (FAZ) filament and the quartet microtubules.","definition_xrefs":["GOC:ach","PMID:32675283","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"ciliary centrin arm assembly","synonyms":[{"name":"ciliary centrin arm formation","type":"related"}],"termid":"GO:0120273"}


id: PBO:0076364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trace amine associated receptor 1","termid":"PBO:0076364"}


id: MONDO:0009689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital myasthenic syndrome caused by mutation(s) in the CHAT gene, encoding choline O-acetyltransferase. It is inherited in an autosomal recessive manner.","definition_xrefs":["NCIT:C132292"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"myasthenia gravis","termid":"MONDO:0009688"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital myasthenic syndrome","termid":"MONDO:0018940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 6","secondary_identifiers":["UMLS:C0393929","ICD9:358.00","MEDGEN:140751","OMIM:254210","DOID:0110671","MESH:C535759","NANDO:1201057","SCTID:230670003","GARD:9689"],"synonyms":[{"name":"CHAT congenital myasthenic syndrome","type":"exact"},{"name":"CMS Ia2","type":"exact"},{"name":"CMS Ia2, formerly","type":"related"},{"name":"CMS w/episodic apnea","type":"related"},{"name":"CMS-ea","type":"related"},{"name":"CMS1A","type":"related"},{"name":"CMS1A2","type":"exact"},{"name":"CMS1A2, formerly","type":"related"},{"name":"CMS6","type":"exact"},{"name":"CMSEA","type":"exact"},{"name":"Cms Ia2","type":"related"},{"name":"Cms Ia2, formerly","type":"related"},{"name":"FIM","type":"exact"},{"name":"FIM, formerly","type":"related"},{"name":"FIMG2","type":"exact"},{"name":"FIMG2 (formerly)","type":"related"},{"name":"FIMG2, formerly","type":"related"},{"name":"congenital myasthenic syndrome 6","type":"exact"},{"name":"congenital myasthenic syndrome 6, presynaptic","type":"exact"},{"name":"congenital myasthenic syndrome caused by mutation in CHAT","type":"exact"},{"name":"congenital myasthenic syndrome type 1a","type":"related"},{"name":"congenital myasthenic syndrome type 6","type":"exact"},{"name":"congenital myasthenic syndrome type Ia","type":"related"},{"name":"congenital myasthenic syndrome type Ia2","type":"exact"},{"name":"congenital myasthenic syndrome type Ia2, formerly","type":"related"},{"name":"congenital myasthenic syndrome with episodic apnea","type":"related"},{"name":"congenital presynaptic myasthenic syndrome associated with episodic apnea","type":"exact"},{"name":"familial infantile myasthenia","type":"exact"},{"name":"familial infantile myasthenia gravis 2","type":"exact"},{"name":"myasthenia familial infantile","type":"related"},{"name":"myasthenia gravis familial infantile 2 (formerly)","type":"related"},{"name":"myasthenia gravis, familial infantile, 2","type":"related"},{"name":"myasthenia gravis, familial infantile, 2, formerly","type":"related"},{"name":"myasthenia, familial infantile","type":"related"},{"name":"myasthenia, familial infantile, formerly","type":"related"},{"name":"myasthenic syndrome congenital associated with episodic apnea","type":"related"},{"name":"myasthenic syndrome, congenital, 6, presynaptic","type":"related"},{"name":"myasthenic syndrome, congenital, associated with episodic apnea","type":"related"},{"name":"myasthenic syndrome, presynaptic, congenital, associated with episodic apnea","type":"related"},{"name":"presynaptic congenital myasthenic syndrome 6","type":"exact"}],"termid":"MONDO:0009689","xrefs":{"Monarch":{"xref_id":"0009689"}}}


id: PBO:0031378
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiosis","termid":"PBO:0031378"}


id: GO:0061751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + sphingomyelin = ceramide + choline phosphate + H+ in a neutral environment.","definition_xrefs":["PMID:26493087","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingomyelin phosphodiesterase activity","termid":"GO:0004767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"neutral sphingomyelin phosphodiesterase activity","synonyms":[{"name":"neutral SMase","type":"exact"},{"name":"neutral sphingomyelinase","type":"exact"}],"termid":"GO:0061751"}


id: GO:0060433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a bronchus from an initial condition to its mature state. This process begins with the formation of the bronchus and ends with the mature structure. The bronchus is the portion of the airway that connects to the lungs.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory tube development","termid":"GO:0030323"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bronchus development","termid":"GO:0060433"}


id: PR:Q9P784
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl401 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L4-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.06","synonyms":[{"name":"Spom972h-rpl401","type":"exact"}],"termid":"PR:Q9P784"}


id: MONDO:0003492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the lacrimal gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal gland carcinoma","termid":"MONDO:0002463"},{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"lacrimal gland squamous cell carcinoma","secondary_identifiers":["NCIT:C6092","DOID:5529","MEDGEN:233607","UMLS:C1334360"],"synonyms":[{"name":"epidermoid carcinoma of lacrimal gland","type":"exact"},{"name":"epidermoid carcinoma of the lacrimal gland","type":"exact"},{"name":"lacrimal gland epidermoid carcinoma","type":"exact"},{"name":"lacrimal gland squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of lacrimal gland","type":"exact"},{"name":"squamous cell carcinoma of the lacrimal gland","type":"exact"}],"termid":"MONDO:0003492","xrefs":{"Monarch":{"xref_id":"0003492"}}}


id: FYPO:0002016
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to oxygen. Cells stop growing (and may die) at a level of oxygen that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to oxygen","synonyms":[{"name":"hypersensitive to oxygen","type":"exact"},{"name":"sensitive to elemental oxygen","type":"exact"},{"name":"sensitive to oxygen during mitotic cell cycle","type":"related"},{"name":"sensitive to oxygen during vegetative growth","type":"exact"}],"termid":"FYPO:0002016"}


id: MONDO:0007980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metachromasia of fibroblasts","secondary_identifiers":["MEDGEN:322549","OMIM:156300","UMLS:C1835008"],"synonyms":[{"name":"metachromasia of fibroblasts","type":"exact"}],"termid":"MONDO:0007980","xrefs":{"Monarch":{"xref_id":"0007980"}}}


id: GO:1990246
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A calcium channel complex in the mitochondrial inner membrane capable of highly-selective calcium channel activity. Its components include the EF-hand-containing proteins mitochondrial calcium uptake 1 (MICU1) and MICU2, the pore-forming subunit mitochondrial calcium uniporter (MCU) and its paralog MCUb, and the MCU regulator EMRE.","definition_xrefs":["PMID:24231807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium channel complex","termid":"GO:0034704"},{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991","GO:0005739"],"is_obsolete":false,"name":"uniplex complex","synonyms":[{"name":"mitochondrial uniporter complex","type":"exact"},{"name":"mitochondrial uniporter holocomplex","type":"exact"}],"termid":"GO:1990246"}


id: MONDO:1011906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder, non-human animal","termid":"MONDO:1011365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemolytic uremic syndrome, non-human animal","secondary_identifiers":["OMIA:000435"],"termid":"MONDO:1011906","xrefs":{"Monarch":{"xref_id":"1011906"}}}


id: GO:2000017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of determination of dorsal identity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of determination of dorsal identity","termid":"GO:2000015"},{"relation_name":"positively_regulates","term_name":"determination of dorsal identity","termid":"GO:0048263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of determination of dorsal identity","synonyms":[{"name":"positive regulation of determination of adaxial identity","type":"related"}],"termid":"GO:2000017"}


id: PBO:0017502
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of TYrosine phosphatase","termid":"PBO:0017502"}


id: PBO:0046444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epsin 3","termid":"PBO:0046444"}


id: PBO:0042972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHD1 helical C-terminal domain containing 1","termid":"PBO:0042972"}


id: GO:0048448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the stamen are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ morphogenesis","termid":"GO:0048444"},{"relation_name":"part_of","term_name":"stamen development","termid":"GO:0048443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stamen morphogenesis","secondary_identifiers":["GO:0048426"],"termid":"GO:0048448"}


id: PATO:0001603
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A life span which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"life span","termid":"PATO:0000050"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased life span","synonyms":[{"name":"high life span","type":"exact"}],"termid":"PATO:0001603"}


id: PBO:0043689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 4I1 pseudogene 2","termid":"PBO:0043689"}


id: GO:0019637
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id: GO:2000681
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of rubidium ion transport.","definition_xrefs":["GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of rubidium ion transport (obsolete GO:2000681)","synonyms":[{"name":"negative regulation of Rb+ transport","type":"exact"},{"name":"negative regulation of rubidium cation transport","type":"exact"}],"termid":"GO:2000681"}


id: GO:0075268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aecium development, a process in which a cuplike structure containing chains of aeciospores is formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reproductive fruiting body development","termid":"GO:0031155"},{"relation_name":"regulates","term_name":"aecium development","termid":"GO:0075267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aecium development","termid":"GO:0075268"}


id: PBO:0030110
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_methionine_import","termid":"PBO:0030110"}


id: MONDO:0017078
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital neural tube closure defect resulting in the protrusion of the brain through a skull opening. When the protrusion includes the meninges, the term encephalomeningocele is used.","definition_xrefs":["NCIT:C84687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"cephalocele","secondary_identifiers":["MEDGEN:4934","GARD:20967","SCTID:55999004","Orphanet:268817","UMLS:C0014065","HP:0011815","icd11.foundation:1520916568","ICD9:742.0"],"synonyms":[{"name":"cephalocele","type":"exact"},{"name":"cephalocele (disease)","type":"exact"},{"name":"cranium bifidum","type":"exact"},{"name":"encephalocele","type":"exact"}],"termid":"MONDO:0017078","xrefs":{"Monarch":{"xref_id":"0017078"}}}


id: FYPO:0008214
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of pre-mRNA measured in a cell during a cellular response to heat is lower than normal. Total pre-mRNA or a specific pre-mRNA may be affected.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to heat","termid":"FYPO:0002287"},{"relation_name":"is_a","term_name":"decreased pre-mRNA level","termid":"FYPO:0002937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased pre-mRNA level during cellular response to heat","termid":"FYPO:0008214"}


id: MONDO:0016725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pineal parenchymal tumor of intermediate differenciation (obsolete MONDO:0016725)","termid":"MONDO:0016725","xrefs":{"Monarch":{"xref_id":"0016725"}}}


id: GO:0045464
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an R8 cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["PMID:11880339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell fate specification","termid":"GO:0043704"},{"relation_name":"part_of","term_name":"R8 cell fate commitment","termid":"GO:0007460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R8 cell fate specification","termid":"GO:0045464"}


id: GO:0090360
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of any platelet-derived growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"platelet-derived growth factor production","termid":"GO:0090360"}


id: PBO:0066865
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 165","termid":"PBO:0066865"}


id: PBO:0116775
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSHZ2 antisense RNA 1","termid":"PBO:0116775"}


id: GO:0030022
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A constituent of the extracellular matrix that facilitates attachment of cells to the matrix.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete adhesive extracellular matrix constituent (obsolete GO:0030022)","synonyms":[{"name":"adhesive extracellular matrix constituent","type":"exact"}],"termid":"GO:0030022"}


id: GO:0046028
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of electrons from the cytochrome b6/f complex of photosystem II.","definition_xrefs":["GOC:ai","ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity (obsolete GO:0046028)","synonyms":[{"name":"plastocyanin","type":"narrow"}],"termid":"GO:0046028"}


id: PBO:0005506
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-K","termid":"PBO:0005506"}


id: GO:1904828
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id: GO:0004066
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id: GO:0010638
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regulation of organelle organization","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of organelle organisation","type":"exact"},{"name":"positive regulation of organelle organization and biogenesis","type":"related"}],"termid":"GO:0010638","terms_by_termid":{"GO:0010845":null,"GO:0010846":null,"GO:0031117":null,"GO:0031453":null,"GO:0032215":null,"GO:0045842":null,"GO:0045876":null,"GO:0061191":null,"GO:0090053":null,"GO:0090055":null,"GO:0090141":null,"GO:0090297":null,"GO:0110161":null,"GO:0140499":null,"GO:1901098":null,"GO:1902426":null,"GO:1902846":null,"GO:1903373":null,"GO:1903380":null,"GO:1903473":null,"GO:1903501":null,"GO:1905561":null,"GO:2000786":null}}


id: GO:0007409
data:
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id: GO:0018186
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent linkage of heme to peroxidase.","definition_xrefs":["RESID:AA0279","RESID:AA0280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-heme linkage","termid":"GO:0017003"},{"relation_name":"is_a","term_name":"cytochrome complex assembly","termid":"GO:0017004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"peroxidase-heme linkage","synonyms":[{"name":"peroxidase-haem linkage","type":"exact"}],"termid":"GO:0018186"}


id: GO:0001548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The menstrual cycle process that results in the formation of one central cavity separating the oocyte/cumulus complex from mural granulosa and theca cells during the various stages of oogenesis.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"part_of","term_name":"antral ovarian follicle growth","termid":"GO:0001547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicular fluid formation in ovarian follicle antrum","synonyms":[{"name":"ovarian follicle antrum/follicular fluid biosynthesis","type":"exact"},{"name":"ovarian follicle antrum/follicular fluid formation","type":"exact"}],"termid":"GO:0001548"}


id: PBO:0088174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xylose and arabinose reductase; member of the aldo-keto reductase (AKR) family; GFP-fusion protein is induced in response to the DNA-damaging agent MMS","termid":"PBO:0088174"}


id: GO:0102509
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanin betaine + H2O = cyanidin 3-O-beta-D-glucoside betaine + beta-D-glucose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 3,5-diglucoside glucosidase activity (obsolete GO:0102509)","termid":"GO:0102509"}


id: PR:Q09823
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec10 gene.","definition_xrefs":["UniProtKB:Q09823","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25G10.04c","synonyms":[{"name":"Spom972h-rec10","type":"exact"}],"termid":"PR:Q09823"}


id: PBO:0040199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 12","termid":"PBO:0040199"}


id: PBO:0083690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enzyme of 'de novo' purine biosynthesis; contains both 5-aminoimidazole-4-carboxamide ribonucleotide transformylase and inosine monophosphate cyclohydrolase activities; ADE16 has a paralog, ADE17, that arose from the whole genome duplication; ade16 ade17 mutants require adenine and histidine","termid":"PBO:0083690"}


id: GO:0000216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Progression from M phase to G1 phase of the mitotic cell cycle.","definition_xrefs":["GOC:mah","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete M/G1 transition of mitotic cell cycle (obsolete GO:0000216)","synonyms":[{"name":"M/G1 transition of mitotic cell cycle","type":"exact"}],"termid":"GO:0000216"}


id: GO:0005323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete very-low-density lipoprotein (obsolete GO:0005323)","synonyms":[{"name":"VLDL","type":"exact"},{"name":"very-low-density lipoprotein","type":"exact"}],"termid":"GO:0005323"}


id: GO:0015694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of mercury (Hg) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transport","termid":"GO:0000041"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"},{"relation_name":"part_of","term_name":"detoxification of mercury ion","termid":"GO:0050787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150","GO:0098754"],"is_obsolete":false,"name":"mercury ion transport","synonyms":[{"name":"mercuric ion transport","type":"narrow"},{"name":"mercury transport","type":"exact"}],"termid":"GO:0015694"}


id: PATO:0001523
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality which is equal to the quotient of the speed of a sound wave divided by its wavelength.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Sound_wavelength"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wavelength","termid":"PATO:0001242"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sound wavelength","termid":"PATO:0001523"}


id: GO:1990696
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of four proteins, loss of which results in Usher Syndrome type 2 (USH2 syndrome), a leading genetic cause of combined hearing and vision loss. This complex is conserved in many species; in mice, it is composed of USH2A, GPR98 (aka ADGRV1), WHRN, and PDZD7.","definition_xrefs":["PMID:25406310","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"USH2 complex","synonyms":[{"name":"USH2 quaternary protein complex","type":"exact"}],"termid":"GO:1990696"}


id: PBO:0073746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 3 pseudogene 2","termid":"PBO:0073746"}


id: GO:1900568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of chanoclavine-I aldehyde.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete chanoclavine-I aldehyde catabolic process (obsolete GO:1900568)","synonyms":[{"name":"chanoclavine-I aldehyde breakdown","type":"exact"},{"name":"chanoclavine-I aldehyde catabolism","type":"exact"},{"name":"chanoclavine-I aldehyde degradation","type":"exact"}],"termid":"GO:1900568"}


id: GO:1904994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leukocyte adhesion to vascular endothelial cell.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:TermGenie","GOC:bc","PMID:23897866","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte cell-cell adhesion","termid":"GO:1903037"},{"relation_name":"regulates","term_name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904994"}


id: PBO:0005008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad7 homolog Rhp7","termid":"PBO:0005008"}


id: MONDO:0033200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 108","secondary_identifiers":["MEDGEN:1627841","GARD:22658","DOID:0080263","UMLS:C4539997","OMIM:617654"],"synonyms":[{"name":"DFNB108","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 108","type":"narrow"},{"name":"deafness, autosomal recessive 108","type":"narrow"}],"termid":"MONDO:0033200","xrefs":{"Monarch":{"xref_id":"0033200"}}}


id: MOD:01345
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to 2-amino-3-oxobutanoic acid.","definition_xrefs":["OMSSA:23","PubMed:9252331","Unimod:401#T","PubMed:12716131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-amino-3-oxobutanoic acid","synonyms":[{"name":"2-amino-3-ketobutyric acid","type":"exact"},{"name":"2-amino-3-oxo-butanoic_acid","type":"related"},{"name":"3-ketobutyrine","type":"exact"},{"name":"Didehydro","type":"related"},{"name":"twoamino3oxobutanoicacid","type":"exact"}],"termid":"MOD:01345"}


id: PBO:0038553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD17A pseudogene 8","termid":"PBO:0038553"}


id: MONDO:0019316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maculopapular cutaneous mastocytosis (MCM) is a form of cutaneous mastocytosis (CM) characterized by the presence of multiple hyperpigmented macules, papules or nodules associated with abnormal accumulation of mast cells in the skin.","definition_xrefs":["Orphanet:79457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous mastocytosis","termid":"MONDO:0019023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093","MONDO:0005570"],"is_obsolete":false,"name":"maculopapular cutaneous mastocytosis","secondary_identifiers":["EFO:1001229","ICD9:708.8","GARD:16723","NCIT:C3433","SCTID:78745000","MEDGEN:22588","UMLS:C0042111","ICDO:9740/1","MedDRA:10046752","icd11.foundation:245322245","DOID:12309"],"synonyms":[{"name":"Paucicellular mastocytosis","type":"related"},{"name":"UP/MPCM","type":"exact"},{"name":"telangiectasia macularis eruptive perstans","type":"related"},{"name":"telangiectatic cutaneous mastocytosis","type":"related"},{"name":"urticaria pigmentosa","type":"exact"},{"name":"urticaria pigmentosa/maculopapular cutaneous mastocytosis","type":"exact"}],"termid":"MONDO:0019316","xrefs":{"Monarch":{"xref_id":"0019316"}}}


id: PBO:0069453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 718, pseudogene","termid":"PBO:0069453"}


id: PBO:0064854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14B pseudogene 5","termid":"PBO:0064854"}


id: MONDO:0023238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hamartoma","termid":"MONDO:0006499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"giant mammary hamartoma","secondary_identifiers":["UMLS:C2931343","MEDGEN:419055","MESH:C536818"],"synonyms":[{"name":"giant hamartoma of the breast","type":"related"}],"termid":"MONDO:0023238","xrefs":{"Monarch":{"xref_id":"0023238"}}}


id: PBO:0039230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKT3 intronic transcript 1","termid":"PBO:0039230"}


id: PBO:0076883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 35","termid":"PBO:0076883"}


id: FYPO:0001467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell phenotype observed in the vegetative growth phase of the life cycle in which the steady-state intracellular calcium ion (Ca2+) concentration increases normally following an extracellular Ca2+ stimulus. Normally, a dose-dependent increased steady-state Ca2+ concentration is reached within 2-3 minutes of extracellular Ca2+ addition, and is sustained for several hours.","definition_xrefs":["PomBase:mah","PMID:21811607"],"gene_count":0,"genotype_count":0,"name":"obsolete normal increase in steady-state intracellular calcium level following extracellular calcium stimulus (obsolete FYPO:0001467)","synonyms":[{"name":"normal increase in steady-state intracellular calcium level following extracellular calcium stimulus","type":"exact"},{"name":"normal increase in steady-state intracellular calcium level following extracellular calcium stimulus during mitotic cell cycle","type":"related"},{"name":"normal increase in steady-state intracellular calcium level following extracellular calcium stimulus during vegetative growth","type":"exact"}],"termid":"FYPO:0001467"}


id: PBO:0039370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMMECR1 intronic transcript 1","termid":"PBO:0039370"}


id: PBO:0070413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication protein A4","termid":"PBO:0070413"}


id: PBO:0069213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 468, pseudogene","termid":"PBO:0069213"}


id: PBO:0068291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease T2","termid":"PBO:0068291"}


id: GO:1990362
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butan-1-ol + NAD+ = butanal + H+ + NADH.","definition_xrefs":["RHEA:33199","GOC:mengo_curators","PMID:1999395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"butanol dehydrogenase (NAD+) activity","synonyms":[{"name":"butanol dehydrogenase activity","type":"broad"}],"termid":"GO:1990362"}


id: PBO:0051126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR16-4 (pseudogene)","termid":"PBO:0051126"}


id: GO:0005626
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete insoluble fraction (obsolete GO:0005626)","synonyms":[{"name":"insoluble fraction","type":"exact"},{"name":"particle-bound","type":"related"}],"termid":"GO:0005626"}


id: MONDO:0015474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intestinal infection with organisms of the genus Cryptosporidium. It occurs in both animals and humans. Symptoms include severe diarrhea.","definition_xrefs":["MESH:D003457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coccidiosis","termid":"MONDO:0005707"},{"relation_name":"is_a","term_name":"parasitic intestinal disorder","termid":"MONDO:0024270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"cryptosporidiosis","secondary_identifiers":["ICD9:007.4","icd11.foundation:1837013982","DOID:1733","ICD10CM:A07.2","MedDRA:10011502","Orphanet:1549","MEDGEN:41362","NCIT:C128408","SCTID:66160001","UMLS:C0010418"],"synonyms":[{"name":"Cryptosporidial gastroenteritis","type":"exact"},{"name":"Cryptosporidioses","type":"related"},{"name":"Cryptosporidium caused disease or disorder","type":"exact"},{"name":"Cryptosporidium disease or disorder","type":"exact"},{"name":"Cryptosporidium infection","type":"exact"},{"name":"Cryptosporidium infectious disease","type":"exact"},{"name":"infection by Cryptosporidium","type":"exact"},{"name":"intestinal cryptosporidiosis","type":"exact"}],"termid":"MONDO:0015474","xrefs":{"Monarch":{"xref_id":"0015474"}}}


id: GO:0150022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an apical dendrite over time, from its formation to the mature structure.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:22683681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite development","termid":"GO:0016358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apical dendrite development","termid":"GO:0150022"}


id: PBO:0040983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biorientation of chromosomes in cell division 1 pseudogene 1","termid":"PBO:0040983"}


id: PBO:0108967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIMAP1 family member D","termid":"PBO:0108967"}


id: PBO:0053843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1109","termid":"PBO:0053843"}


id: PBO:0081306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 90 pseudogene 1","termid":"PBO:0081306"}


id: PBO:0034415
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_specification_of","termid":"PBO:0034415"}


id: GO:1905444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of clathrin coat assembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of clathrin coat assembly","termid":"GO:1905443"},{"relation_name":"negatively_regulates","term_name":"clathrin coat assembly","termid":"GO:0048268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"negative regulation of clathrin coat assembly","synonyms":[{"name":"down regulation of clathrin cage assembly","type":"exact"},{"name":"down regulation of clathrin coat assembly","type":"exact"},{"name":"down-regulation of clathrin cage assembly","type":"exact"},{"name":"down-regulation of clathrin coat assembly","type":"exact"},{"name":"downregulation of clathrin cage assembly","type":"exact"},{"name":"downregulation of clathrin coat assembly","type":"exact"},{"name":"inhibition of clathrin cage assembly","type":"narrow"},{"name":"inhibition of clathrin coat assembly","type":"narrow"},{"name":"negative regulation of clathrin cage assembly","type":"exact"}],"termid":"GO:1905444"}


id: PBO:0048530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 6","termid":"PBO:0048530"}


id: FYPO:0005912
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromatin remodeling that occurs as part of meiosis I is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:19139281","GO:1905886","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"},{"relation_name":"is_a","term_name":"normal chromatin organization","termid":"FYPO:0007940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal meiosis-specific chromatin remodeling","synonyms":[{"name":"normal chromatin remodeling during meiosis I","type":"exact"},{"name":"normal chromatin remodeling involved in meiosis I","type":"exact"},{"name":"normal meiotic nuclear division-specific chromatin remodeling","type":"exact"}],"termid":"FYPO:0005912"}


id: PBO:0002872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-[acyl-carrier protein] reductase (predicted)","termid":"PBO:0002872"}


id: PBO:0087198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R-SNARE protein; assembles into SNARE complex with Bet1p, Bos1p and Sed5p; cycles between the ER and Golgi complex; involved in anterograde and retrograde transport between the ER and Golgi; synaptobrevin homolog","termid":"PBO:0087198"}


id: MONDO:0004431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bleeding into the joints. It may arise from trauma or spontaneously in patients with hemophilia.","definition_xrefs":["MESH:D006395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemarthrosis","secondary_identifiers":["ICD9:719.1","DOID:801","ICD9:719.10","ICD9:719.18","MEDGEN:5479","SCTID:81808003","UMLS:C0018924","EFO:1001344"],"synonyms":[{"name":"haemarthrosis of shoulder joint","type":"narrow"},{"name":"haemarthrosis of the ankle and foot","type":"narrow"},{"name":"haemarthrosis of the pelvic region and thigh","type":"narrow"},{"name":"hemarthrosis involving ankle and foot","type":"narrow"},{"name":"hemarthrosis involving forearm","type":"narrow"},{"name":"hemarthrosis involving hand","type":"narrow"},{"name":"hemarthrosis involving lower leg","type":"narrow"},{"name":"hemarthrosis involving pelvic region and thigh","type":"narrow"},{"name":"hemarthrosis involving shoulder region","type":"narrow"},{"name":"hemarthrosis involving upper arm","type":"narrow"},{"name":"hemarthrosis of ankle and/or foot","type":"exact"},{"name":"hemarthrosis of forearm","type":"narrow"},{"name":"hemarthrosis of hand","type":"narrow"},{"name":"hemarthrosis of lower leg","type":"narrow"},{"name":"hemarthrosis of shoulder","type":"narrow"},{"name":"hemarthrosis of shoulder region","type":"exact"},{"name":"hemarthrosis of the ankle and foot","type":"narrow"},{"name":"hemarthrosis of the ankle and/or foot","type":"exact"},{"name":"hemarthrosis of the forearm","type":"narrow"},{"name":"hemarthrosis of the hand","type":"narrow"},{"name":"hemarthrosis of the lower leg","type":"narrow"},{"name":"hemarthrosis of the pelvic region and thigh","type":"narrow"},{"name":"hemarthrosis of the shoulder region","type":"exact"},{"name":"hemarthrosis of the upper arm","type":"narrow"},{"name":"hemarthrosis of upper arm","type":"narrow"}],"termid":"MONDO:0004431","xrefs":{"Monarch":{"xref_id":"0004431"}}}


id: GO:0062224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of somatic muscle development.","definition_xrefs":["PMID:16643882","PMID:25758712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of somatic muscle development","termid":"GO:0062223"},{"relation_name":"positively_regulates","term_name":"somatic muscle development","termid":"GO:0007525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of somatic muscle development","termid":"GO:0062224"}


id: MONDO:1012689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease that occurs in Muntjak deer in which there is a buildup of GM2 gangliosides in tissues due to the lack of the enzyme β-hexosaminidase A. It is characterised by depression, ataxia, circling and visual deficits from an early age.","definition_xrefs":["PMID:9930895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, non-human animal","termid":"MONDO:1010167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2 gangliosidosis, Muntjak deer","secondary_identifiers":["OMIA:001461-9888"],"synonyms":[{"name":"gangliosidosis, GM2, type I (B variant), Muntjak deer","type":"related"}],"termid":"MONDO:1012689","xrefs":{"Monarch":{"xref_id":"1012689"}}}


id: GO:0075084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of transmembrane receptor-mediated cAMP signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction (obsolete GO:0075084)","synonyms":[{"name":"modulation by host of symbiont transmembrane receptor-mediated cAMP signaling","type":"exact"}],"termid":"GO:0075084"}


id: CHEBI:15652
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-xanthylic acid","termid":"CHEBI:15652"}


id: PATO:0002110
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of its having most of the cellular characteristics of the tissue of origin.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"differentiated","termid":"PATO:0002099"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"well differentiated","termid":"PATO:0002110"}


id: GO:0010046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mycotoxin stimulus. A mycotoxin is a toxic chemical substance produced by fungi.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to toxic substance","termid":"GO:0009636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mycotoxin","termid":"GO:0010046"}


id: PBO:0053076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ladybird homeobox 2","termid":"PBO:0053076"}


id: RO:0009001
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"\\\"has substance added\\\" is a relation existing between a (physical) entity and a substance in which the entity has had the substance added to it at some point in time.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_substance_added","termid":"RO:0009001"}


id: PBO:0073727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLAM family member 8","termid":"PBO:0073727"}


id: PBO:0087759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ubiqunol-cytochrome c oxidoreductase complex; this complex comprises part of the mitochondrial respiratory chain; members include Cobp, Rip1p, Cyt1p, Cor1p, Qcr2p, Qcr6p, Qcr7p, Qcr8p, Qcr9p, and Qcr10p and comprises part of the mitochondrial respiratory chain","termid":"PBO:0087759"}


id: MONDO:0017026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease","termid":"MONDO:0015925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interstitial lung disease specific to adulthood","secondary_identifiers":["UMLS:C5679743","Orphanet:264735","MEDGEN:1842399"],"synonyms":[{"name":"ILD specific to adulthood","type":"exact"}],"termid":"MONDO:0017026","xrefs":{"Monarch":{"xref_id":"0017026"}}}


id: PBO:0005766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase Lsp1","termid":"PBO:0005766"}


id: GO:0046721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of formic acid, HCOOH, by a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formate transport","termid":"GO:0015724"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"formic acid secretion","synonyms":[{"name":"formate secretion","type":"exact"}],"termid":"GO:0046721"}


id: PBO:0051869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISL1 divergent transcript","termid":"PBO:0051869"}


id: PBO:0058733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6859-3","termid":"PBO:0058733"}


id: PBO:0064017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 51","termid":"PBO:0064017"}


id: GO:1901743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2-deoxystreptamine.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"},{"relation_name":"is_a","term_name":"2-deoxystreptamine metabolic process","termid":"GO:1901742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"2-deoxystreptamine catabolic process","synonyms":[{"name":"2-deoxystreptamine breakdown","type":"exact"},{"name":"2-deoxystreptamine catabolism","type":"exact"},{"name":"2-deoxystreptamine degradation","type":"exact"}],"termid":"GO:1901743"}


id: GO:0034834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-mercaptobenzothiazole + O2 + 2 H+ + 2 e- = 2-mercaptobenzothiazole-cis-6,7-dihydrodiol.","definition_xrefs":["UM-BBD_reactionID:r1177"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-mercaptobenzothiazole dioxygenase activity (obsolete GO:0034834)","termid":"GO:0034834"}


id: PBO:0065512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline-serine-threonine phosphatase interacting protein 2","termid":"PBO:0065512"}


id: GO:0072685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an Mre11 complex, a trimeric protein complex that possesses endonuclease activity and is involved in meiotic recombination, DNA repair and checkpoint signaling.","definition_xrefs":["GOC:mah","PMID:19211838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"Mre11 complex assembly","synonyms":[{"name":"MRN complex assembly","type":"exact"},{"name":"MRX complex assembly","type":"exact"},{"name":"RAD50-MRE11-NBN complex assembly","type":"exact"},{"name":"RMX complex assembly","type":"exact"},{"name":"Rad50 complex assembly","type":"exact"},{"name":"Rad50-Rad32-Nbs1 complex assembly","type":"exact"}],"termid":"GO:0072685"}


id: PBO:0090068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase [NAD(P)+]","termid":"PBO:0090068"}


id: MONDO:0958302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A renal cell carcinoma with MiT translocations that is characterized by the presence of the chromosomal translocation t(6;11) which fuses the TFEB transcription factor gene, with the MALAT1 gene.","definition_xrefs":["DOID:0081414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MIT family translocation renal cell carcinoma","termid":"MONDO:0017886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"TFEB-rearranged renal cell carcinoma","secondary_identifiers":["UMLS:C4745249","MEDGEN:1664261"],"termid":"MONDO:0958302","xrefs":{"Monarch":{"xref_id":"0958302"}}}


id: PBO:0030062
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_acidic_medium","termid":"PBO:0030062"}


id: MONDO:0014151
data:
  {"annotated_genes":["SJAG_00392","SJAG_00412"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89162,89163],"is_not":false,"summary":null,"term":"MONDO:0014151"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null},"genotype_count":0,"is_obsolete":false,"name":"pulmonary hypertension, neonatal, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:811528","UMLS:C3714958","OMIM:615371"],"synonyms":[{"name":"PHN","type":"related"},{"name":"pulmonary hypertension, neonatal, susceptibility to","type":"exact"},{"name":"susceptibility to neonatal pulmonary hypertension","type":"related"}],"termid":"MONDO:0014151","terms_by_termid":{"MONDO:0014151":null},"xrefs":{"Monarch":{"xref_id":"0014151"}}}


id: MONDO:0957788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 18a, autosomal dominant","secondary_identifiers":["OMIM:620512","UMLS:C5882694","MEDGEN:1844217"],"termid":"MONDO:0957788","xrefs":{"Monarch":{"xref_id":"0957788"}}}


id: SO:0000101
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposon or insertion sequence. An element that can insert in a variety of DNA sequences.","direct_ancestors":[{"relation_name":"is_a","term_name":"integrated_mobile_genetic_element","termid":"SO:0001039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable_element","secondary_identifiers":["http://en.wikipedia.org/wiki/Transposable_element"],"synonyms":[{"name":"transposable element","type":"exact"},{"name":"transposon","type":"exact"}],"termid":"SO:0000101"}


id: PBO:0084970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(+)-dependent glutamate dehydrogenase; degrades glutamate to ammonia and alpha-ketoglutarate; expression sensitive to nitrogen catabolite repression and intracellular ammonia levels; genetically interacts with GDH3 by suppressing stress-induced apoptosis","termid":"PBO:0084970"}


id: PBO:0058307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4680","termid":"PBO:0058307"}


id: GO:0005953
data:
  {"annotated_genes":["SJAG_03029","SJAG_04923"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73024,75706],"is_not":false,"summary":null,"term":"GO:0005953"}]},"cv_name":"cellular_component","definition":"A heterodimeric enzyme, composed of an alpha and a beta subunit. Participates in the post-translational C-terminal modification of several small GTPases, allowing their targeting to the membrane.","definition_xrefs":["PMID:9781874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03029":null,"SJAG_04923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"CAAX-protein geranylgeranyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0005953","terms_by_termid":{"GO:0005953":null}}


id: SO:0001312
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_2prime_O_dimethyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_2_prime_O_dimethyladenosine","secondary_identifiers":["RNAMOD:088"],"synonyms":[{"name":"N6 2 prime O dimethyladenosine","type":"exact"},{"name":"N6,2'-O-dimethyladenosine","type":"exact"},{"name":"m6Am","type":"exact"}],"termid":"SO:0001312"}


id: GO:2000169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of peptidyl-cysteine S-nitrosylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"peptidyl-cysteine S-nitrosylation","termid":"GO:0018119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidyl-cysteine S-nitrosylation","termid":"GO:2000169"}


id: GO:0106248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of poly(A)-specific ribonuclease activity.","definition_xrefs":["PMID:29932902","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of poly(A)-specific ribonuclease activity (obsolete GO:0106248)","termid":"GO:0106248"}


id: FYPO:0004355
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein phosphorylation during mitosis","synonyms":[{"name":"increased protein phosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"increased protein phosphorylation during mitotic M phase","type":"related"},{"name":"increased protein phosphorylation during mitotic nuclear division","type":"exact"},{"name":"increased protein/peptide phosphorylation during mitosis","type":"exact"}],"termid":"FYPO:0004355"}


id: PBO:0076947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TDP-glucose 4,6-dehydratase","termid":"PBO:0076947"}


id: MONDO:0020643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autism susceptibility 1 (obsolete MONDO:0020643)","termid":"MONDO:0020643","xrefs":{"Monarch":{"xref_id":"0020643"}}}


id: MONDO:0024555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megalencephalic leukoencephalopathy with subcortical cysts","termid":"MONDO:0011391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"megalencephalic leukoencephalopathy with subcortical cysts 1","secondary_identifiers":["UMLS:C5779875","MEDGEN:1826136","DOID:0080316","OMIM:604004"],"synonyms":[{"name":"Lvm","type":"related"},{"name":"MLC1","type":"related"},{"name":"VL","type":"related"},{"name":"Vacuolating megalencephalic leukoencephalopathy with subcortical cysts","type":"related"},{"name":"Van Der Knaap disease","type":"related"},{"name":"leukoencephalopathy with swelling and cysts","type":"related"},{"name":"megalencephalic leukoencephalopathy with subcortical cysts","type":"broad"},{"name":"megalencephalic leukoencephalopathy with subcortical cysts 1","type":"exact"}],"termid":"MONDO:0024555","xrefs":{"Monarch":{"xref_id":"0024555"}}}


id: PBO:0076661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 23, pseudogene","termid":"PBO:0076661"}


id: PBO:0070416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated protein 2","termid":"PBO:0070416"}


id: FYPO:0002776
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of sumoylated protein measured in a cell is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal level of sumoylated protein in cell","synonyms":[{"name":"normal level of sumoylated protein during vegetative growth","type":"exact"},{"name":"normal level of sumoylated protein in cell during mitotic cell cycle","type":"related"},{"name":"normal sumoylated protein accumulation","type":"related"},{"name":"normal sumoylated protein level","type":"exact"}],"termid":"FYPO:0002776"}


id: GO:2000627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of miRNA catabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of miRNA catabolic process","termid":"GO:2000625"},{"relation_name":"is_a","term_name":"positive regulation of miRNA metabolic process","termid":"GO:2000630"},{"relation_name":"positively_regulates","term_name":"miRNA catabolic process","termid":"GO:0010587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of miRNA catabolic process","synonyms":[{"name":"positive regulation of microRNA catabolic process","type":"exact"}],"termid":"GO:2000627"}


id: PBO:0055226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2652","termid":"PBO:0055226"}


id: PBO:0079007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon TGT) 1-1","termid":"PBO:0079007"}


id: PBO:0040188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 1","termid":"PBO:0040188"}


id: PBO:0069259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 514, pseudogene","termid":"PBO:0069259"}


id: PBO:0003900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron sulfur cluster assembly protein (predicted)","termid":"PBO:0003900"}


id: GO:0047278
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 bilirubin-glucuronoside = bilirubin + bilirubin-bisglucuronoside.","definition_xrefs":["RHEA:16885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"bilirubin-glucuronoside glucuronosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00062"],"synonyms":[{"name":"bilirubin glucuronoside glucuronosyltransferase activity","type":"exact"},{"name":"bilirubin monoglucuronide transglucuronidase activity","type":"exact"},{"name":"bilirubin-glucuronoside:bilirubin-glucuronoside D-glucuronosyltransferase activity","type":"exact"}],"termid":"GO:0047278"}


id: MONDO:0006120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neoplastic or reactive proliferation of the C-cells in the thyroid gland. The neoplastic C-cell hyperplasia is associated with familial medullary thyroid gland carcinoma and multiple endocrine neoplasia type II and IIB. Morphologically, it is characterized by the presence of clusters of intrafollicular C-cells with atypical cytologic features. The reactive C-cell hyperplasia is also known as physiological or secondary C-cell hyperplasia and it is associated with conditions that cause hypercalcemia (e.g., hyperparathyroidism).","definition_xrefs":["NCIT:C46100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"},{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-cell hyperplasia","secondary_identifiers":["EFO:1000147","MEDGEN:90975","UMLS:C0342190"],"synonyms":[{"name":"C-cell hyperplasia","type":"exact"}],"termid":"MONDO:0006120","xrefs":{"Monarch":{"xref_id":"0006120"}}}


id: PBO:0087404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Structural component of the meiotic outer plaque; outer plaque is a membrane-organizing center that assembles on the cytoplasmic face of the spindle pole body during meiosis II and triggers the formation of the prospore membrane","termid":"PBO:0087404"}


id: GO:1904523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA amplification.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26195783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA biosynthetic process","termid":"GO:2000278"},{"relation_name":"regulates","term_name":"DNA amplification","termid":"GO:0006277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of DNA amplification","termid":"GO:1904523"}


id: PBO:0066219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 24","termid":"PBO:0066219"}


id: GO:0046027
data:
  {"annotated_genes":["SJAG_03162"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76330],"is_not":false,"summary":null,"term":"GO:0046027"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a glycerophospholipid + a 1,2-diacyl-sn-glycerol = a monoacylglycerophospholipid + a triacyl-sn-glycerol.","definition_xrefs":["RHEA:14057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"phospholipid:diacylglycerol acyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:2.3.1.158-RXN","EC:2.3.1.158"],"synonyms":[{"name":"PDAT activity","type":"related"},{"name":"phospholipid:1,2-diacyl-sn-glycerol O-acyltransferase activity","type":"related"}],"termid":"GO:0046027","terms_by_termid":{"GO:0046027":null}}


id: MOD:00381
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-selenocysteine residue to L-selenocysteinyl tungsten bis(molybdopterin guanine dinucleotide).","definition_xrefs":["RESID:AA0376#SEC","PubMed:11372198","PubMed:12220497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tungsten containing modified residue","termid":"MOD:00746"},{"relation_name":"is_a","term_name":"pterin modified residue","termid":"MOD:00748"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-selenocysteine residue","termid":"MOD:02073"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-selenocysteinyl tungsten bis(molybdopterin guanine dinucleotide) (Sec)","termid":"MOD:00381"}


id: GO:0140260
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mitochondrial proton-transporting ATP synthase complex.","definition_xrefs":["PMID:12110673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase complex binding","termid":"GO:0140260"}


id: PBO:0083338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the uncharacterized ORFs YLR462W and YLR464W","termid":"PBO:0083338"}


id: MONDO:0004755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of ruminants with tapeworms of the genus Moniezia.","definition_xrefs":["MESH:D008989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monieziasis","secondary_identifiers":["DOID:931","MEDGEN:6424","UMLS:C0026414"],"termid":"MONDO:0004755","xrefs":{"Monarch":{"xref_id":"0004755"}}}


id: PBO:0057379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548au","termid":"PBO:0057379"}


id: PBO:0050072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox containing 1","termid":"PBO:0050072"}


id: PBO:0070923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 31","termid":"PBO:0070923"}


id: GO:0001505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates levels of neurotransmitter.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of neurotransmitter levels (obsolete GO:0001505)","termid":"GO:0001505"}


id: MONDO:0019695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acromelic dysplasia","secondary_identifiers":["icd11.foundation:177141175","UMLS:C4736195","GARD:19194","MEDGEN:1843369","Orphanet:93436"],"termid":"MONDO:0019695","xrefs":{"Monarch":{"xref_id":"0019695"}}}


id: PBO:0074633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 27","termid":"PBO:0074633"}


id: PBO:0047576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor 1","termid":"PBO:0047576"}


id: PR:Q9C105
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone deacetylase complex subunit SAP130 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase-like protein PB1E7.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.04c","secondary_identifiers":["UniProtKB:Q9C105"],"synonyms":[{"name":"Spom972h-SAP130","type":"exact"}],"termid":"PR:Q9C105"}


id: PBO:0040809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICD1 antisense RNA 1","termid":"PBO:0040809"}


id: MONDO:0032744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 37","secondary_identifiers":["GARD:18408","OMIM:618429","UMLS:C5193091","MEDGEN:1677534","DOID:0111927"],"synonyms":[{"name":"SPERMATOGENIC FAILURE 37","type":"related"},{"name":"SPGF37","type":"related"}],"termid":"MONDO:0032744","xrefs":{"Monarch":{"xref_id":"0032744"}}}


id: PBO:0000400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase, MBOAT (predicted)","termid":"PBO:0000400"}


id: GO:0061476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an anticoagulant stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to anticoagulant","termid":"GO:0061476"}


id: PBO:0074036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A21 antisense RNA 1","termid":"PBO:0074036"}


id: PBO:0031491
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_spindle","termid":"PBO:0031491"}


id: GO:0140439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a stearoyl (systematic name, octadecanoyl) group to a sulfur atom on the cysteine of a protein molecule, in the reaction: octadecanoyl-CoA + L-cysteinyl-[protein] = CoA + S-octadecanoyl-L-cysteinyl-[protein].","definition_xrefs":["PMID:12681491","PMID:22968831","RHEA:59740","PMID:22247542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-cysteine S-acyltransferase activity","termid":"GO:0019707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protein-cysteine S-stearoyltransferase activity","termid":"GO:0140439"}


id: PBO:0065045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3A","termid":"PBO:0065045"}


id: MONDO:0014683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type A","termid":"MONDO:0000171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A9","secondary_identifiers":["UMLS:C4225291","MEDGEN:902513","GARD:16134","DOID:0111232","OMIM:616538"],"synonyms":[{"name":"MDDGA9","type":"related"},{"name":"Walker-Warburg syndrome or muscle-eye brain disease, Dag1-related","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 9","type":"related"}],"termid":"MONDO:0014683","xrefs":{"Monarch":{"xref_id":"0014683"}}}


id: GO:0002517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involving any mechanism for tolerance induction in T cells.","definition_xrefs":["ISBN:0781735149","PMID:16551263","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell tolerance induction","synonyms":[{"name":"T lymphocyte tolerance induction","type":"exact"},{"name":"T-cell tolerance induction","type":"exact"},{"name":"T-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002517"}


id: MOD:01374
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A modification that effectively oxygenates C5 of an L-leucine residue to form a (2S,4R)-5-oxoleucine.","definition_xrefs":["PubMed:16858410","ChEBI:43739","RESID:AA0444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,4R)-5-oxoleucine","synonyms":[{"name":"(2S,4R)-2-amino-4-methyl-5-oxopentanoic acid","type":"exact"},{"name":"(2S,4R)-5-oxoleucine","type":"exact"},{"name":"(4R)-5-oxo-L-leucine","type":"exact"}],"termid":"MOD:01374"}


id: PR:Q9P3A9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- utp8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3A9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1565.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1565.05","synonyms":[{"name":"Spom972h-utp8","type":"exact"}],"termid":"PR:Q9P3A9"}


id: RO:0002515
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is sequentially adjacent to y iff x and y do not overlap and if there are no base units intervening between x and y","direct_ancestors":[{"relation_name":"is_a","term_name":"does_not_overlap_sequence_of","termid":"RO:0002527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequentially_adjacent_to","termid":"RO:0002515"}


id: PBO:0003702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II large subunit Rpb1","termid":"PBO:0003702"}


id: GO:0018007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glucuronylation of the N-terminal glycine of proteins to form the derivative D-glucuronyl-N-glycine.","definition_xrefs":["RESID:AA0058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid glucuronylation","termid":"GO:0018006"},{"relation_name":"is_a","term_name":"peptidyl-glycine modification","termid":"GO:0018201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"N-terminal peptidyl-glycine N-glucuronylation","termid":"GO:0018007"}


id: PBO:0091359
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dpb4-interacting, RRM and IDR-containing factor","termid":"PBO:0091359"}


id: PBO:0085345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipase B (lysophospholipase) involved in lipid metabolism; displays transacylase activity in vitro; overproduction confers resistance to lysophosphatidylcholine","termid":"PBO:0085345"}


id: PBO:0050699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 12B","termid":"PBO:0050699"}


id: PBO:0041045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 2","termid":"PBO:0041045"}


id: GO:0016226
data:
  {"annotated_genes":["SJAG_01238","SJAG_04397","SJAG_00455","SJAG_03701","SJAG_00532","SJAG_02497","SJAG_02895","SJAG_00894","SJAG_00066","SJAG_01417","SJAG_04016","SJAG_02306","SJAG_02866","SJAG_02994","SJAG_02457","SJAG_01615","SJAG_03862","SJAG_00186","SJAG_03222","SJAG_04014","SJAG_00972","SJAG_01063"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57327,59260,70015,80770,91143],"is_not":false,"summary":null,"term":"GO:0016226"},{"annotations":[100173,101157,105043,111851,95072,68805,94843,115870,69407,79932,111657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044571"},{"annotations":[111224,94659,100850,90081,103542,111838,119867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044572"}]},"cv_name":"biological_process","definition":"The incorporation of iron and exogenous sulfur into a metallo-sulfur cluster.","definition_xrefs":["GOC:vw","GOC:pde","GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallo-sulfur cluster assembly","termid":"GO:0031163"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00066":null,"SJAG_00186":null,"SJAG_00455":null,"SJAG_00532":null,"SJAG_00894":null,"SJAG_00972":null,"SJAG_01063":null,"SJAG_01238":null,"SJAG_01417":null,"SJAG_01615":null,"SJAG_02306":null,"SJAG_02457":null,"SJAG_02497":null,"SJAG_02866":null,"SJAG_02895":null,"SJAG_02994":null,"SJAG_03222":null,"SJAG_03701":null,"SJAG_03862":null,"SJAG_04014":null,"SJAG_04016":null,"SJAG_04397":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"iron-sulfur cluster assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-1362409","Reactome:R-HSA-2564830"],"synonyms":[{"name":"iron-sulfur cluster biosynthesis","type":"related"},{"name":"iron-sulphur cluster assembly","type":"exact"}],"termid":"GO:0016226","terms_by_termid":{"GO:0016226":null,"GO:0044571":null,"GO:0044572":null}}


id: FYPO:0001305
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of any long-chain fatty acid-CoA ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0005447","FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal long-chain fatty acid-CoA ligase activity","synonyms":[{"name":"abnormal lcfa-ligase activity","type":"exact"}],"termid":"FYPO:0001305"}


id: PBO:0002923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2AF small subunit, U2AF-23","termid":"PBO:0002923"}


id: PBO:0051591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL20RB antisense RNA 1","termid":"PBO:0051591"}


id: GO:0071635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of transforming growth factor-beta.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta production","termid":"GO:0071634"},{"relation_name":"negatively_regulates","term_name":"transforming growth factor beta production","termid":"GO:0071604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of transforming growth factor beta production","secondary_identifiers":["GO:2001202"],"synonyms":[{"name":"negative regulation of TGF-B production","type":"exact"},{"name":"negative regulation of TGF-beta production","type":"exact"},{"name":"negative regulation of TGFB production","type":"exact"},{"name":"negative regulation of TGFbeta production","type":"exact"},{"name":"negative regulation of transforming growth factor-beta production","type":"exact"},{"name":"negative regulation of transforming growth factor-beta secretion","type":"narrow"}],"termid":"GO:0071635"}


id: SOFP:qseq_type
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qseq_type","termid":"SOFP:qseq_type"}


id: MONDO:0022745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pneumoconiosis","termid":"MONDO:0015926"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed dust pneumoconiosis","secondary_identifiers":["SCTID:32139003","ICD9:504","MEDGEN:78109","UMLS:C0264436"],"synonyms":[{"name":"Mixed dust pneumoconiosis","type":"related"},{"name":"labrador lung","type":"related"},{"name":"mixed dust pneumoconiosis","type":"exact"}],"termid":"MONDO:0022745","xrefs":{"Monarch":{"xref_id":"0022745"}}}


id: MONDO:1012180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myoclonus epilepsy of Lafora, non-human animal","termid":"MONDO:1011627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonus epilepsy of Lafora, Eurasian elk","secondary_identifiers":["OMIA:000690-9852"],"termid":"MONDO:1012180","xrefs":{"Monarch":{"xref_id":"1012180"}}}


id: MONDO:0957284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nemaline myopathy","termid":"MONDO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"nemaline myopathy 5C, autosomal dominant","secondary_identifiers":["DOID:0081375","UMLS:C5830549","MEDGEN:1841185","OMIM:620389"],"termid":"MONDO:0957284","xrefs":{"Monarch":{"xref_id":"0957284"}}}


id: GO:0070475
data:
  {"annotated_genes":["SJAG_03877","SJAG_02281","SJAG_01958","SJAG_02024","SJAG_02417","SJAG_03008"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77390,80044,80446,80722,81384],"is_not":false,"summary":null,"term":"GO:0070475"},{"annotations":[81915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070476"}]},"cv_name":"biological_process","definition":"The addition of a methyl group to an atom in the nucleoside base portion of a nucleotide residue in an rRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA methylation","termid":"GO:0031167"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01958":null,"SJAG_02024":null,"SJAG_02281":null,"SJAG_02417":null,"SJAG_03008":null,"SJAG_03877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"rRNA base methylation","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0070475","terms_by_termid":{"GO:0070475":null,"GO:0070476":null}}


id: PBO:0071410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 16","termid":"PBO:0071410"}


id: PBO:0077511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM229B pseudogene 1","termid":"PBO:0077511"}


id: PBO:0060215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major vault protein","termid":"PBO:0060215"}


id: MONDO:0003629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete uterine corpus serous adenocarcinoma (obsolete MONDO:0003629)","termid":"MONDO:0003629","xrefs":{"Monarch":{"xref_id":"0003629"}}}


id: PBO:0000921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase, TRAMP complex subunit Mtr4","termid":"PBO:0000921"}


id: SO:0000505
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one D-gene and one DJ-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D_DJ_cluster","synonyms":[{"name":"D DJ cluster","type":"exact"},{"name":"D-(DJ)-CLUSTER","type":"exact"}],"termid":"SO:0000505"}


id: GO:0048785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the hatching gland over time, from its formation to the mature structure. The cells of the hatching gland contain enzymes responsible for solubilization of the egg chorion, facilitating the hatching process.","definition_xrefs":["GOC:jid","GOC:bf","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hatching gland development","termid":"GO:0048785"}


id: MONDO:0002485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that arises from the breast and is composed of cells of neuroendocrine origin. Most cases are neuroendocrine carcinomas. Primary carcinoid tumors of the breast are very rare.","definition_xrefs":["NCIT:C5169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine neoplasm","termid":"MONDO:0019496"},{"relation_name":"is_a","term_name":"breast neoplasm","termid":"MONDO:0021100"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast neuroendocrine neoplasm","secondary_identifiers":["MEDGEN:231969","DOID:3009","UMLS:C1332635"],"synonyms":[{"name":"breast NET","type":"exact"},{"name":"breast endocrine neoplasm","type":"exact"},{"name":"breast neuroendocrine neoplasm","type":"exact"},{"name":"breast neuroendocrine tumor","type":"exact"},{"name":"breast neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"breast neuroendocrine tumour","type":"exact"},{"name":"neuroendocrine neoplasm of breast","type":"exact"},{"name":"neuroendocrine neoplasm of the breast","type":"exact"},{"name":"neuroendocrine tumor of the breast","type":"exact"},{"name":"neuroendocrine tumour of the breast","type":"exact"}],"termid":"MONDO:0002485","xrefs":{"Monarch":{"xref_id":"0002485"}}}


id: PBO:0046496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERGIC and golgi 3","termid":"PBO:0046496"}


id: GO:0016344
data:
  {"annotated_genes":["SJAG_00794","SJAG_01613","SJAG_02814","SJAG_01805","SJAG_03683","SJAG_02761","SJAG_04076","SJAG_02624","SJAG_03540"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111113,95681,97215,102303,66706,70179,104368,101137,117927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990571"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the directed movement of chromosomes from the center of the spindle towards the spindle poles takes place, mediated by the shortening of microtubules attached to the chromosomes. This occurs during meiosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome movement towards spindle pole","termid":"GO:0051305"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic chromosome segregation","termid":"GO:0045132"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00794":null,"SJAG_01613":null,"SJAG_01805":null,"SJAG_02624":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03540":null,"SJAG_03683":null,"SJAG_04076":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0007049","GO:0051179","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"meiotic chromosome movement towards spindle pole","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"chromosome migration to spindle pole during meiosis","type":"exact"},{"name":"chromosome movement towards spindle pole during meiosis","type":"exact"},{"name":"meiotic chromosome movement","type":"broad"},{"name":"meiotic chromosome movement to spindle pole","type":"exact"}],"termid":"GO:0016344","terms_by_termid":{"GO:1990571":null}}


id: PBO:0044197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin F","termid":"PBO:0044197"}


id: MONDO:0011758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hurler syndrome is the most severe form of mucopolysaccharidosis type 1 (MPS1), a rare lysosomal storage disease, characterized by skeletal abnormalities, cognitive impairment, heart disease, respiratory problems, enlarged liver and spleen, characteristic facies and reduced life expectancy.","definition_xrefs":["Orphanet:93473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis type 1","termid":"MONDO:0001586"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"familial restrictive cardiomyopathy","termid":"MONDO:0016340"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005066","MONDO:0002561","MONDO:0005328","MONDO:0037792"],"is_obsolete":false,"name":"Hurler syndrome","secondary_identifiers":["GARD:12559","NANDO:1200094","MEDGEN:39698","NCIT:C61261","OMIM:607014","SCTID:65327002","NANDO:2201168","UMLS:C0086795","DOID:0111390"],"synonyms":[{"name":"Hurler disease","type":"exact"},{"name":"Hurler syndrome","type":"exact"},{"name":"MPS I H","type":"exact"},{"name":"MPS1-H","type":"related"},{"name":"MPS1H","type":"exact"},{"name":"MPSIH","type":"exact"},{"name":"mucopolysaccharidosis IH","type":"related"},{"name":"mucopolysaccharidosis type 1H","type":"exact"},{"name":"mucopolysaccharidosis type IH","type":"exact"}],"termid":"MONDO:0011758","xrefs":{"Monarch":{"xref_id":"0011758"}}}


id: MONDO:0002793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete medullomyoblastoma (obsolete MONDO:0002793)","termid":"MONDO:0002793","xrefs":{"Monarch":{"xref_id":"0002793"}}}


id: PBO:0069825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1111, pseudogene","termid":"PBO:0069825"}


id: PBO:0065505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraspeckle component 1 pseudogene 2","termid":"PBO:0065505"}


id: GO:0034422
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of an aleurone grain.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"aleurone grain","termid":"GO:0033095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"aleurone grain lumen","termid":"GO:0034422"}


id: FYPO:0003742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that undergoes two or more rounds of cell division during which chromosomes segregate unequally, and then dies.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions","termid":"FYPO:0002430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, unequal chromosome segregation","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, unequal chromosome segregation","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, unequal chromosome segregation","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, unequal chromosome segregation","type":"exact"}],"termid":"FYPO:0003742"}


id: MONDO:1012703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive retinal atrophy that occurs in dogs due to a mutation in the CCDC66 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"progressive retinal atrophy, dog","termid":"MONDO:1012226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive retinal atrophy, CCDC66 related, dog","secondary_identifiers":["OMIA:001521-9615"],"synonyms":[{"name":"early onset progressive retinal atrophy, dog","type":"related"},{"name":"gPRA","type":"exact"},{"name":"generalized PRA, dog","type":"related"}],"termid":"MONDO:1012703","xrefs":{"Monarch":{"xref_id":"1012703"}}}


id: PBO:0074961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-3","termid":"PBO:0074961"}


id: GO:0075333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of adenylate cyclase-mediated signal transduction in the symbiont organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont adenylate cyclase-mediated signal transduction (obsolete GO:0075333)","termid":"GO:0075333"}


id: PBO:0042237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle progression 1","termid":"PBO:0042237"}


id: GO:0034734
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that forms part of the TFIIIC complex, observed in human. The complex is poorly characterized, but contains the 250-kDa form of HsBdp1, and is thought to include nuclear factor 1 (NF1). It stimulates binding by human TFIIIC2 and is required for transcription activity.","definition_xrefs":["PMID:15096501","GOC:mah","PMID:11433012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III transcription regulator complex","termid":"GO:0090576"},{"relation_name":"part_of","term_name":"transcription factor TFIIIC complex","termid":"GO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transcription factor TFIIIC1 complex","termid":"GO:0034734"}


id: PBO:0089416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S45","termid":"PBO:0089416"}


id: PBO:0064284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing O1","termid":"PBO:0064284"}


id: GO:0019276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-N-acetylgalactosamine, a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar metabolic process","termid":"GO:0006040"},{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"UDP-N-acetylgalactosamine metabolic process","synonyms":[{"name":"UDP-N-acetylgalactosamine metabolism","type":"exact"}],"termid":"GO:0019276"}


id: GO:0106227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glutarylation of a lysine residue in a protein.","definition_xrefs":["GOC:sp","PMID:31542297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine glutarylation","termid":"GO:0106227"}


id: MONDO:0003012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A high grade carcinoma of the kidney. It is not a distinct clinicopathological entity and includes a diverse group of renal cell carcinomas which have been transformed from a lower to a higher grade.","definition_xrefs":["NCIT:C27893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal cell adenocarcinoma","termid":"MONDO:0005549"},{"relation_name":"is_a","term_name":"sarcomatoid carcinoma","termid":"MONDO:0006406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"sarcomatoid renal cell carcinoma","secondary_identifiers":["ONCOTREE:SRCC","UMLS:C1266043","MEDGEN:220411","DOID:4473","ICDO:8318/3"],"synonyms":[{"name":"RCC w/ sarcomatoid features","type":"exact"},{"name":"SRCC","type":"related"},{"name":"renal cell carcinoma with sarcomatoid features","type":"exact"},{"name":"renal cell carcinoma, spindle cell","type":"exact"},{"name":"sarcomatoid renal cell cancer","type":"exact"},{"name":"sarcomatoid renal cell carcinoma","type":"exact"}],"termid":"MONDO:0003012","xrefs":{"Monarch":{"xref_id":"0003012"}}}


id: FYPO:0002095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to a DNA damage stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to DNA damage","synonyms":[{"name":"increased protein phosphorylation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"increased protein phosphorylation during cellular response to DNA damaging agent","type":"related"},{"name":"increased protein phosphorylation during response to DNA damage stimulus","type":"exact"}],"termid":"FYPO:0002095"}


id: PBO:0000558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron responsive transcriptional regulator, peptidase family (predicted)","termid":"PBO:0000558"}


id: PBO:0050475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A3","termid":"PBO:0050475"}


id: PBO:0083026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; this ORF was removed when a sequence update created a stop codon after residue 23","termid":"PBO:0083026"}


id: MONDO:0019811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital tricuspid malformation","termid":"MONDO:0020289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"tricuspid valve agenesis","secondary_identifiers":["GARD:19261","MEDGEN:672653","Orphanet:95457","UMLS:C0685715","ICD10CM:Q22.4"],"synonyms":[{"name":"congenital unguarded tricuspid orifice","type":"exact"}],"termid":"MONDO:0019811","xrefs":{"Monarch":{"xref_id":"0019811"}}}


id: PBO:0029530
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_beta-glucanase","termid":"PBO:0029530"}


id: MONDO:0004939
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A drug dependence for a hallucinogenic substance.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"drug dependence","termid":"MONDO:0005303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hallucinogen dependence","secondary_identifiers":["ICD9:304.5","DOID:9977","icd11.foundation:2041952725","NCIT:C34657","UMLS:C0018528","SCTID:38247002","ICD9:304.50","MEDGEN:5415"],"termid":"MONDO:0004939","xrefs":{"Monarch":{"xref_id":"0004939"}}}


id: PR:G2TRS1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRS1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein new14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.20","synonyms":[{"name":"Spom972h-new14","type":"exact"}],"termid":"PR:G2TRS1"}


id: PBO:0064640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphopantothenoylcysteine decarboxylase","termid":"PBO:0064640"}


id: PBO:0059036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMP24 opposite strand","termid":"PBO:0059036"}


id: GO:0045157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of electrons within the noncyclic electron transport pathway of photosynthesis.","definition_xrefs":["ISBN:0716731363","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity (obsolete GO:0045157)","termid":"GO:0045157"}


id: GO:0001039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sequence of DNA that is a part of a hybrid type promoter that controls transcription by RNA polymerase III (Pol III). A hybrid Pol III promoter contains both regulatory elements both upstream and downstream of the transcription initiation site. An example gene with such a promoter is the S. cerevisiae U6 gene.","definition_xrefs":["GOC:txnOH","PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III cis-regulatory region sequence-specific DNA binding","termid":"GO:0000992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0003677","GO:0000976","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase III hybrid type promoter sequence-specific DNA binding","secondary_identifiers":["GO:0001037"],"synonyms":[{"name":"RNA polymerase III hybrid type promoter DNA binding","type":"related"}],"termid":"GO:0001039"}


id: GO:0010409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving extensins, a group of 60-90 kDNA hydroxyproline (Hyp)-rich glycoproteins whose polypeptide backbone consists of many repeats of structural Ser(Hyp)4-6 motifs, with heavily glycosylated 1-4 arabinose residues O-linked to contiguous stretches of Hyp residues, with most of the Ser residues being O-galactosylated.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall hydroxyproline-rich glycoprotein metabolic process","termid":"GO:0010404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"extensin metabolic process","synonyms":[{"name":"extensin metabolism","type":"exact"}],"termid":"GO:0010409"}


id: GO:0000262
data:
  {"annotated_genes":["SJAG_03068","SJAG_MIT06","SJAG_01807","SJAG_01262","SJAG_00153","SJAG_00611","SJAG_MIT07","SJAG_MIT05","SJAG_03906"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[64585,90452,101216,104808,104827,107888,121066,121074,121075],"is_not":false,"summary":null,"term":"GO:0000262"}]},"cv_name":"cellular_component","definition":"A chromosome found in the mitochondrion of a eukaryotic cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome","termid":"GO:0005694"},{"relation_name":"part_of","term_name":"mitochondrial nucleoid","termid":"GO:0042645"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00611":null,"SJAG_01262":null,"SJAG_01807":null,"SJAG_03068":null,"SJAG_03906":null,"SJAG_MIT05":null,"SJAG_MIT06":null,"SJAG_MIT07":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005739","GO:0005694","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"mitochondrial chromosome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao1186327184"],"synonyms":[{"name":"mitochondrial DNA","type":"narrow"},{"name":"mitochondrial genome","type":"related"},{"name":"mtDNA","type":"narrow"}],"termid":"GO:0000262","terms_by_termid":{"GO:0000262":null}}


id: PBO:0026933
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_nucleus_during_mitotic_interphase","termid":"PBO:0026933"}


id: PBO:0057472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 590","termid":"PBO:0057472"}


id: PBO:0069643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 920, pseudogene","termid":"PBO:0069643"}


id: MONDO:0019159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Loeffler's endocarditis is a rare restrictive cardiomyopathy characterized by hypereosinophilia and fibrous thickening of the endocardium, with usually large thrombi against the ventricle walls, that can lead to cardiovascular complications such as heart failure and thromboembolism. It manifests with symptoms like edema, fatigue and shortness of breath. It is usually secondary to eosinophil-associated tissue damage and is associated with idiopathic hypereosinophilic syndrome, chronic eosinophilic leukemia, carcinoma, or lymphoma.","definition_xrefs":["Orphanet:75566"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-familial restrictive cardiomyopathy","termid":"MONDO:0016345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Loeffler endocarditis","secondary_identifiers":["SCTID:449829009","GARD:18929","icd11.foundation:1223390562","MedDRA:10052841","MEDGEN:104788","NCIT:C27044","UMLS:C0206143","DOID:396"],"synonyms":[{"name":"eosinophilic endocarditis","type":"exact"},{"name":"eosinophilic endomyocardial disease","type":"exact"}],"termid":"MONDO:0019159","xrefs":{"Monarch":{"xref_id":"0019159"}}}


id: PBO:0004862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L13 (predicted)","termid":"PBO:0004862"}


id: PATO:0000582
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A weight which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"weight","termid":"PATO:0000128"},{"relation_name":"is_a","term_name":"increased force","termid":"PATO:0002245"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased weight","synonyms":[{"name":"heavy","type":"exact"},{"name":"high weight","type":"exact"}],"termid":"PATO:0000582"}


id: MONDO:0004681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of disorders that affect a person's ability to learn or process specific types of information which is in contrast to his/her apparent level of intellect.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specific developmental disorder","termid":"MONDO:0000592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"learning disability","secondary_identifiers":["MEDGEN:199623","NCIT:C89334","UMLS:C0751265","ICD9:315.2","SCTID:1855002","MESH:D007859","DOID:8927"],"synonyms":[{"name":"Academic skill disorder","type":"exact"},{"name":"learning disorder","type":"exact"}],"termid":"MONDO:0004681","xrefs":{"Monarch":{"xref_id":"0004681"}}}


id: PBO:0090304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone activator Sti1","termid":"PBO:0090304"}


id: PBO:0067443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 565, pseudogene","termid":"PBO:0067443"}


id: PBO:0117209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sulfite efflux transmembrane transporter Ssu4","termid":"PBO:0117209"}


id: FYPO:0008106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell size phenotype in which a cell has a volume that is larger than normal during stationary phase.","definition_xrefs":["PMID:37128864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell size","termid":"FYPO:0008096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cell size during stationary phase","termid":"FYPO:0008106"}


id: PBO:0090100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphomevalonate decarboxylase mvd1","termid":"PBO:0090100"}


id: PBO:0040614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAI1 associated protein 3","termid":"PBO:0040614"}


id: PBO:0090565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2462 family protein, human Leydig cell tumor 10 kDa protein homolog","termid":"PBO:0090565"}


id: PBO:0028644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_dehydrodolichyl_diphosphate_synthase_activity","termid":"PBO:0028644"}


id: GO:0006239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that generates dCMP, deoxycytidine monophosphate from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide salvage","termid":"GO:0010139"},{"relation_name":"is_a","term_name":"dCMP biosynthetic process","termid":"GO:0046064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dCMP salvage","synonyms":[{"name":"deoxycytidine monophosphate salvage","type":"exact"}],"termid":"GO:0006239"}


id: GO:1900034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to heat.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"cellular response to heat","termid":"GO:0034605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to heat","secondary_identifiers":["Reactome:R-HSA-3371453","Reactome:R-HSA-3371571"],"synonyms":[{"name":"regulation of cellular response to heat stress","type":"exact"}],"termid":"GO:1900034"}


id: PBO:0044933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase zeta","termid":"PBO:0044933"}


id: GO:0072573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction directed at lipopolysaccharide antigens.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"},{"relation_name":"is_a","term_name":"negative regulation of lipopolysaccharide-mediated signaling pathway","termid":"GO:0031665"},{"relation_name":"part_of","term_name":"cellular response to lipopolysaccharide","termid":"GO:0071222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"tolerance induction to lipopolysaccharide","synonyms":[{"name":"tolerance induction to LPS","type":"exact"},{"name":"tolerance induction to endotoxin","type":"broad"}],"termid":"GO:0072573"}


id: PBO:0089676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator family transmembrane transporter Mug111","termid":"PBO:0089676"}


id: MONDO:1011725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease, non-human animal","termid":"MONDO:1011724"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin 7S deficiency, non-human animal","secondary_identifiers":["OMIA:000551"],"termid":"MONDO:1011725","xrefs":{"Monarch":{"xref_id":"1011725"}}}


id: PBO:0046909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 27 member D1","termid":"PBO:0046909"}


id: GO:1900717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of violaceol II biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of violaceol II biosynthetic process","termid":"GO:1900716"},{"relation_name":"negatively_regulates","term_name":"violaceol II biosynthetic process","termid":"GO:1900593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of violaceol II biosynthetic process","synonyms":[{"name":"down regulation of violaceol II anabolism","type":"exact"},{"name":"down regulation of violaceol II biosynthesis","type":"exact"},{"name":"down regulation of violaceol II biosynthetic process","type":"exact"},{"name":"down regulation of violaceol II formation","type":"exact"},{"name":"down regulation of violaceol II synthesis","type":"exact"},{"name":"down-regulation of violaceol II anabolism","type":"exact"},{"name":"down-regulation of violaceol II biosynthesis","type":"exact"},{"name":"down-regulation of violaceol II biosynthetic process","type":"exact"},{"name":"down-regulation of violaceol II formation","type":"exact"},{"name":"down-regulation of violaceol II synthesis","type":"exact"},{"name":"downregulation of violaceol II anabolism","type":"exact"},{"name":"downregulation of violaceol II biosynthesis","type":"exact"},{"name":"downregulation of violaceol II biosynthetic process","type":"exact"},{"name":"downregulation of violaceol II formation","type":"exact"},{"name":"downregulation of violaceol II synthesis","type":"exact"},{"name":"inhibition of violaceol II anabolism","type":"exact"},{"name":"inhibition of violaceol II biosynthesis","type":"exact"},{"name":"inhibition of violaceol II biosynthetic process","type":"narrow"},{"name":"inhibition of violaceol II formation","type":"exact"},{"name":"inhibition of violaceol II synthesis","type":"exact"},{"name":"negative regulation of violaceol II anabolism","type":"exact"},{"name":"negative regulation of violaceol II biosynthesis","type":"exact"},{"name":"negative regulation of violaceol II formation","type":"exact"},{"name":"negative regulation of violaceol II synthesis","type":"exact"}],"termid":"GO:1900717"}


id: MOD:01068
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen atom of an L-tryptophan residue with a halogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"halogenated tryptophan","synonyms":[{"name":"HalTrp","type":"exact"}],"termid":"MOD:01068"}


id: PBO:0029777
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_branched,_elongated_vegetative_cell","termid":"PBO:0029777"}


id: PBO:0038986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenoceptor alpha 2C","termid":"PBO:0038986"}


id: PBO:0046941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 66 member C","termid":"PBO:0046941"}


id: GO:0006253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dCTP, deoxycytidine triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate catabolic process","termid":"GO:0009213"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide catabolic process","termid":"GO:0009223"},{"relation_name":"is_a","term_name":"dCTP metabolic process","termid":"GO:0046065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"dCTP catabolic process","synonyms":[{"name":"dCTP breakdown","type":"exact"},{"name":"dCTP catabolism","type":"exact"},{"name":"dCTP degradation","type":"exact"}],"termid":"GO:0006253"}


id: RO:0002409
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"negatively_regulates","termid":"RO:0002212"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indirectly_inhibits","termid":"RO:0002409"}


id: GO:0017136
data:
  {"annotated_genes":["SJAG_04039","SJAG_01075","SJAG_04186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91925,79121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032041"},{"annotations":[106130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141222"},{"annotations":[91926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140765"},{"annotations":[79122,116424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046969"},{"annotations":[79123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-acetyl-L-lysyl-[histone] + NAD+ + H2O = L-lysyl-[protein] + 2''-O-acetyl-ADP-D-ribose + nicotinamide. This reaction transfers an acetyl group from a histone to NAD, producing nicotinamide.","definition_xrefs":["PMID:28450737","PMID:24691964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity","termid":"GO:0004407"},{"relation_name":"is_a","term_name":"NAD-dependent protein lysine deacetylase activity","termid":"GO:0034979"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01075":null,"SJAG_04039":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0033558","GO:0003674","GO:0016746","GO:0003824","GO:0019213","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"histone deacetylase activity, NAD-dependent","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"NAD-dependent histone deacetylase activity","type":"exact"},{"name":"NAD-dependent histone lysine deacetylase activity","type":"exact"},{"name":"SIR2","type":"related"},{"name":"histone deacetylase activity","type":"broad"},{"name":"sirtuin","type":"narrow"}],"termid":"GO:0017136","terms_by_termid":{"GO:0032041":null,"GO:0046969":null,"GO:0046970":null,"GO:0140765":null,"GO:0141222":null}}


id: PBO:0056126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LysM domain containing 3","termid":"PBO:0056126"}


id: PBO:0038533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 8","termid":"PBO:0038533"}


id: PBO:0071014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 16","termid":"PBO:0071014"}


id: PBO:0067935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 237","termid":"PBO:0067935"}


id: PBO:0032725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_M_phase_with_abnormal_spindle","termid":"PBO:0032725"}


id: GO:1902155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to G1 DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to DNA damage checkpoint signaling","termid":"GO:1902153"},{"relation_name":"regulates","term_name":"response to G1 DNA damage checkpoint signaling","termid":"GO:0072432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to G1 DNA damage checkpoint signaling","synonyms":[{"name":"regulation of mitotic cell cycle G1/S transition DNA damage checkpoint effector process","type":"exact"},{"name":"regulation of response to mitotic cell cycle G1/S transition DNA damage checkpoint signaling","type":"exact"},{"name":"regulation of response to signal involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"}],"termid":"GO:1902155"}


id: PBO:0031360
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_amphotericin_B","termid":"PBO:0031360"}


id: GO:0030307
data:
  {"annotated_genes":["SJAG_02723","SJAG_00514","SJAG_03581","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108610],"is_not":false,"summary":null,"term":"GO:0030307"},{"annotations":[96473,91735,97748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, extent or direction of cell growth.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"positive regulation of growth","termid":"GO:0045927"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"cell growth","termid":"GO:0016049"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_02392":null,"SJAG_02723":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell growth","type":"narrow"},{"name":"stimulation of cell growth","type":"narrow"},{"name":"up regulation of cell growth","type":"exact"},{"name":"up-regulation of cell growth","type":"exact"},{"name":"upregulation of cell growth","type":"exact"}],"termid":"GO:0030307","terms_by_termid":{"GO:0030307":null,"GO:0051519":null}}


id: MONDO:1011499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epidermolysis bullosa simplex that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa, cattle","termid":"MONDO:1010751"},{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex, non-human animal","termid":"MONDO:1011428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermolysis bullosa simplex, cattle","secondary_identifiers":["OMIA:002082-9913"],"termid":"MONDO:1011499","xrefs":{"Monarch":{"xref_id":"1011499"}}}


id: PBO:0064573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porcupine O-acyltransferase","termid":"PBO:0064573"}


id: PATO:0000268
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000268 absolute visual threshold (obsolete PATO:0000268)","termid":"PATO:0000268"}


id: PBO:0005512
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.6","termid":"PBO:0005512"}


id: GO:0004167
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-dopachrome = 5,6-dihydroxyindole-2-carboxylate.","definition_xrefs":["EC:5.3.3.12","RHEA:13041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dopachrome isomerase activity","secondary_identifiers":["GO:0048059","KEGG_REACTION:R03673","MetaCyc:DOPACHROME-DELTA-ISOMERASE-RXN"],"synonyms":[{"name":"DCF activity","type":"related"},{"name":"DCT activity","type":"related"},{"name":"L-dopachrome isomerase activity","type":"related"},{"name":"L-dopachrome keto-enol isomerase activity","type":"related"},{"name":"L-dopachrome-methyl ester tautomerase activity","type":"related"},{"name":"TRP activity","type":"related"},{"name":"TRP-1","type":"related"},{"name":"TRP-2","type":"related"},{"name":"TRP2","type":"related"},{"name":"dopachrome Delta(7),Delta(2)-isomerase activity","type":"related"},{"name":"dopachrome conversion activity","type":"broad"},{"name":"dopachrome conversion factor activity","type":"broad"},{"name":"dopachrome delta-isomerase activity","type":"exact"},{"name":"dopachrome delta7,Delta2-isomerase activity","type":"related"},{"name":"dopachrome keto-enol isomerase activity","type":"related"},{"name":"dopachrome oxidoreductase activity","type":"related"},{"name":"dopachrome rearranging enzyme activity","type":"related"},{"name":"dopachrome tautomerase activity","type":"related"},{"name":"dopachrome-rearranging enzyme","type":"related"},{"name":"tryosinase-related protein-2","type":"related"},{"name":"tyrosinase-related protein 2 activity","type":"related"}],"termid":"GO:0004167"}


id: MONDO:0007572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary familial polycythemia is an inherited hematological disorder resulting from mutations in the erythropoietin (EPO) receptor and is characterized by an elevated absolute red blood cell mass caused by uncontrolled red blood cell production in the presence of low EPO levels.","definition_xrefs":["Orphanet:90042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial polycythemia","termid":"MONDO:0001115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"primary familial polycythemia due to EPO receptor mutation","secondary_identifiers":["DOID:0060652","MEDGEN:1641215","ICD9:289.6","GARD:9843","icd11.foundation:962836252","SCTID:17342003","UMLS:C4551637","OMIM:133100"],"synonyms":[{"name":"ECYT1","type":"related"},{"name":"EPOR familial polycythemia","type":"exact"},{"name":"PFCP","type":"exact"},{"name":"autosomal dominant benign erythrocytosis","type":"related"},{"name":"congenital erythrocytosis due to erythropoietin receptor mutation","type":"exact"},{"name":"congenital polycythemia due to erythropoietin receptor mutation","type":"exact"},{"name":"erythrocytosis autosomal dominant benign","type":"related"},{"name":"erythrocytosis, autosomal dominant benign","type":"related"},{"name":"erythrocytosis, familial, 1","type":"exact"},{"name":"erythrocytosis, familial, type 1","type":"exact"},{"name":"erythrocytosis, somatic","type":"exact"},{"name":"familial erythrocytosis","type":"exact"},{"name":"familial erythrocytosis 1","type":"exact"},{"name":"familial erythrocytosis type 1","type":"exact"},{"name":"familial erythrocytosis, 1","type":"exact"},{"name":"familial polycythemia caused by mutation in EPOR","type":"exact"},{"name":"polycythemia, primary familial and congenital","type":"related"},{"name":"primary congenital erythrocytosis","type":"exact"},{"name":"primary familial and congenital polycythemia","type":"exact"},{"name":"primary familial polycythemia","type":"related"}],"termid":"MONDO:0007572","xrefs":{"Monarch":{"xref_id":"0007572"}}}


id: GO:0047129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S)-2-[(R)-1-carboxyethylamino]pentanoate + H2O + NAD+ = L-2-aminopentanoate + H+ + NADH + pyruvate.","definition_xrefs":["RHEA:21592","EC:1.5.1.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"opine dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03732","MetaCyc:1.5.1.28-RXN"],"synonyms":[{"name":"(2S)-2-{[1-(R)-carboxyethyl]amino}pentanoate dehydrogenase (NAD, L-aminopentanoate-forming)","type":"related"},{"name":"(2S)-2-{[1-(R)-carboxyethyl]amino}pentanoate:NAD+ oxidoreductase (L-aminopentanoate-forming)","type":"related"}],"termid":"GO:0047129"}


id: PBO:0066896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 196","termid":"PBO:0066896"}


id: MONDO:0014475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 40 (SCA40) is a very rare subtype of autosomal dominant cerebellar ataxia type 1, characterized by the adult-onset of unsteady gait and dysarthria, followed by wide-based gait, gait ataxia, ocular dysmetria, intention tremor, scanning speech, hyperreflexia and dysdiadochokinesis.","definition_xrefs":["Orphanet:423275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426","MONDO:0002039"],"is_obsolete":false,"name":"spinocerebellar ataxia type 40","secondary_identifiers":["OMIM:616053","SCTID:734020000","GARD:12371","UMLS:C4518336","MEDGEN:1385103","DOID:0050986"],"synonyms":[{"name":"SCA40","type":"exact"},{"name":"spinocerebellar ataxia 40","type":"related"},{"name":"spinocerebellar ataxia type 40","type":"exact"}],"termid":"MONDO:0014475","xrefs":{"Monarch":{"xref_id":"0014475"}}}


id: PBO:0088081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ub-like protein; Ub-like protein conjugated to phosphatidylethanolamine (PE); role in membrane fusion during autophagosome formation; membrane anchored Atg8p-PE is involved in phagophore expansion during autophagosome formation; deconjugation is also required for biogenesis; targets Atg1p to autophagosomes; binds to the Atg1p-Atg13p complex, triggers its vacuolar degradation; role in vacuolar membrane protein turnover during early stationary phase; component of autophagosomes and Cvt vesicles","termid":"PBO:0088081"}


id: PR:O13351
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pmt3 gene.","definition_xrefs":["UniProtKB:O13351","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like protein pmt3/smt3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.06","synonyms":[{"name":"Spom972h-pmt3","type":"exact"}],"termid":"PR:O13351"}


id: SO:0001377
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"3_methylpseudouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_methylpseudouridine","secondary_identifiers":["RNAMOD:094"],"synonyms":[{"name":"3-methylpseudouridine","type":"exact"},{"name":"m3Y","type":"exact"},{"name":"three methylpseudouridine","type":"exact"}],"termid":"SO:0001377"}


id: PBO:0090167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription elongation factor Eaf1","termid":"PBO:0090167"}


id: PBO:0012288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase","termid":"PBO:0012288"}


id: MONDO:0020578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Abnormally low level of 25-hydroxyvitamin D in the blood.","gene_count":0,"genotype_count":0,"name":"obsolete vitamin D deficiency (obsolete MONDO:0020578)","termid":"MONDO:0020578","xrefs":{"Monarch":{"xref_id":"0020578"}}}


id: PBO:0068822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 60, pseudogene","termid":"PBO:0068822"}


id: PBO:0034294
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-visited_by","termid":"PBO:0034294"}


id: PBO:0076376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGF-beta activated kinase 1 (MAP3K7) binding protein 3","termid":"PBO:0076376"}


id: MONDO:0044688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare inflammatory optic neuropathy characterized by isolated episodes (either single or recurrent) of optic neuritis not associated with other neurological or systemic disease. Patients typically present with subacute unilateral loss of vision progressing over several days to two weeks, periocular pain and pain on eye movement (which may precede the onset of visual symptoms), light flashes on eye movement, abnormal color vision, reduced contrast sensitivity, and relative afferent pupillary defect. The optic disk appears swollen in many patients, and uveitis may be associated and can be present for years before the onset of optic neuritis.","definition_xrefs":["Orphanet:499096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune/inflammatory optic neuropathy","termid":"MONDO:0044685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated optic neuritis","secondary_identifiers":["MEDGEN:43952","UMLS:C0022023","GARD:22039"],"synonyms":[{"name":"ION","type":"exact"},{"name":"ion","type":"exact"}],"termid":"MONDO:0044688","xrefs":{"Monarch":{"xref_id":"0044688"}}}


id: FYPO:0004883
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone is abnormal. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["PomBase:mah","GO:1990023","GO:1902967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle","termid":"FYPO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to mitotic spindle midzone","synonyms":[{"name":"abnormal protein localisation to mitotic spindle midzone","type":"exact"},{"name":"abnormal protein localization to spindle midzone during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to spindle midzone during vegetative growth","type":"exact"}],"termid":"FYPO:0004883"}


id: PBO:0108524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KPRP N-terminal and LCE C-terminal like protein","termid":"PBO:0108524"}


id: MONDO:1012467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"postpartum dysgalactia syndrome, non-human animal","termid":"MONDO:1011680"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postpartum dysgalactia syndrome, pig","secondary_identifiers":["OMIA:001822-9823"],"termid":"MONDO:1012467","xrefs":{"Monarch":{"xref_id":"1012467"}}}


id: PR:Q9UTS8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: fex1/fex2.","definition_xrefs":["UniProtKB:Q9UTS8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0695 membrane protein C977.11/PB8B6.06c (Schizosaccharomyces pombe 972h-)","synonyms":[{"name":"Spom972h-fex2","type":"exact"}],"termid":"PR:Q9UTS8"}


id: PBO:0036034
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K12_acetylation_at_subtelomere_during_vegetative_growth","termid":"PBO:0036034"}


id: PBO:0004104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG-box variant","termid":"PBO:0004104"}


id: GO:0070285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a pigment cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a pigment cell fate.","definition_xrefs":["GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment cell development","termid":"GO:0070285"}


id: MOD:00123
data:
  {"annotated_genes":["SJAG_00464","SJAG_02766"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[82428,82462],"is_not":false,"summary":null,"term":"MOD:00123"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-carboxy-L-lysine.","definition_xrefs":["PubMed:7754395","PubMed:4436319","RESID:AA0114","PubMed:637859","Unimod:299#K","PubMed:11369851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"carboxylated residue","termid":"MOD:01152"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00464":null,"SJAG_02766":null},"genotype_count":0,"is_obsolete":false,"name":"N6-carboxy-L-lysine","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"(2S)-2-amino-6-(carboxyamino)hexanoic acid","type":"exact"},{"name":"2-amino-6-carbamic hexanoic acid","type":"exact"},{"name":"Carboxy","type":"related"},{"name":"Carboxylation","type":"related"},{"name":"MOD_RES N6-carboxylysine","type":"exact"},{"name":"N6-carbamyllysine","type":"related"},{"name":"N6-carboxy-L-lysine","type":"exact"},{"name":"N6-carboxylysine","type":"exact"},{"name":"N6CbxLys","type":"exact"},{"name":"lysine NZ-carboxylic acid","type":"exact"}],"termid":"MOD:00123","terms_by_termid":{"MOD:00123":null}}


id: GO:0014072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an isoquinoline alkaloid stimulus. An isoquinoline alkaloid is any member of a group of compounds with the heterocyclic ring structure of benzo(c)pyridine which is a structure characteristic of the group of opium alkaloids.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkaloid","termid":"GO:0043279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to isoquinoline alkaloid","termid":"GO:0014072"}


id: GO:0050034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-rhamnofuranose + NAD+ = L-rhamnono-1,4-lactone + H+ + NADH.","definition_xrefs":["EC:1.1.1.173","RHEA:12649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"L-rhamnose 1-dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03942","MetaCyc:L-RHAMNOSE-1-DEHYDROGENASE-RXN"],"synonyms":[{"name":"L-rhamnofuranose:NAD+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0050034"}


id: GO:0035010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Events resulting in the formation of a multilayered cellular sheath surrounding an invader and thus preventing its development. This defense mechanism is often seen in insects in response to nematodes or parasitoids, which are too large to be phagocytosed by individual hemocytes. In some organisms the capsule is blackened due to melanization.","definition_xrefs":["GOC:bf","GO_REF:0000022","PMID:12225920","PMID:11846478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"encapsulation of foreign target","termid":"GO:0035010"}


id: PBO:0046102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B pseudogene 5","termid":"PBO:0046102"}


id: PBO:0034394
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-immediately_causally_upstream_of","termid":"PBO:0034394"}


id: MONDO:0015024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ectodermal dysplasia syndrome in which the cause of the disease is a mutation in the KDF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia 12, hypohidrotic/hair/tooth/nail type","secondary_identifiers":["GARD:18593","OMIM:617337","MEDGEN:934583","UMLS:C4310616","DOID:0111652"],"synonyms":[{"name":"ECTD12","type":"exact"},{"name":"KDF1 ectodermal dysplasia syndrome","type":"exact"},{"name":"ectodermal dysplasia 12, hypohidrotic/hair/Tooth/nail type","type":"exact"},{"name":"ectodermal dysplasia 12, hypohidrotic/hair/tooth/nail type; ECTD12","type":"exact"},{"name":"ectodermal dysplasia syndrome caused by mutation in KDF1","type":"exact"}],"termid":"MONDO:0015024","xrefs":{"Monarch":{"xref_id":"0015024"}}}


id: PBO:0001833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase Spk1","termid":"PBO:0001833"}


id: PBO:0111927
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating type M-specific polypeptide Mi","termid":"PBO:0111927"}


id: GO:0043108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of withdrawing a pilus back into a cell.","definition_xrefs":["GOC:go_curators","PMID:17355871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilus organization","termid":"GO:0043711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pilus retraction","termid":"GO:0043108"}


id: GO:0016208
data:
  {"annotated_genes":["SJAG_01859","SJAG_02741","SJAG_00044","SJAG_02785"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70354,71768,75700,90751],"is_not":false,"summary":null,"term":"GO:0016208"}]},"cv_name":"molecular_function","definition":"Binding to AMP, adenosine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl ribonucleotide binding","termid":"GO:0032559"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_01859":null,"SJAG_02741":null,"SJAG_02785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"AMP binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-380930"],"termid":"GO:0016208","terms_by_termid":{"GO:0016208":null}}


id: MONDO:0011011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Skeletal dysplasia-epilepsy-short stature syndrome is characterized by moderate to severe intellectual deficit, seizures, short stature, and skeletal dysplasia. It has been described in seven patients. Other manifestations can be associated (retinal abnormalities, brachydactyly, prognathism, dental malocclusion). It is transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:1858"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal dysplasia-epilepsy-short stature syndrome","secondary_identifiers":["SCTID:715428003","UMLS:C0796046","GARD:350","MESH:C537625","MEDGEN:208660","OMIM:601187"],"synonyms":[{"name":"GURRIERI syndrome","type":"related"},{"name":"Gurrieri-Sammito-Bellussi syndrome","type":"exact"},{"name":"intellectual disability, epilepsy, short stature and skeletal dysplasia","type":"related"},{"name":"mental retardation, epilepsy, short stature and skeletal dysplasia","type":"related"}],"termid":"MONDO:0011011","xrefs":{"Monarch":{"xref_id":"0011011"}}}


id: MONDO:0031021
data:
  {"annotated_genes":["SJAG_00516"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88689],"is_not":false,"summary":null,"term":"MONDO:0031021"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 104","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070390","MEDGEN:1823956","OMIM:619970","UMLS:C5774183"],"synonyms":[{"name":"DEE104","type":"exact"},{"name":"developmental and epileptic encephalopathy 104","type":"exact"}],"termid":"MONDO:0031021","terms_by_termid":{"MONDO:0031021":null},"xrefs":{"Monarch":{"xref_id":"0031021"}}}


id: GO:0000449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the Large Subunit (LSU) rRNA, and the 5S rRNA, in that order, from 5' to 3' along the primary transcript. For example, primary ribosomal RNA transcripts containing three genes, in this order, are produced in E. coli and other prokaryotic species. Note that the use of the word tricistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0010467","GO:0042254","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)","termid":"GO:0000449"}


id: PATO:0001817
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fatigability which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased strength","termid":"PATO:0001779"},{"relation_name":"is_a","term_name":"fatigability","termid":"PATO:0001815"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased fatigability","synonyms":[{"name":"low fatigability","type":"exact"}],"termid":"PATO:0001817"}


id: FYPO:0006690
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell proceeds through the mitotic metaphase/anaphase transition in the presence of an uncorrected problem (such as chromosome structure or kinetochore attachment), and as a result undergoes abnormal chromosome segregation and subsequently dies.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic catastrophe with abnormal chromosome segregation (obsolete FYPO:0006690)","synonyms":[{"name":"mitotic catastrophe with abnormal chromosome segregation during mitotic cell cycle","type":"related"},{"name":"mitotic catastrophe with abnormal chromosome segregation during vegetative growth","type":"exact"}],"termid":"FYPO:0006690"}


id: PBO:0043734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 13","termid":"PBO:0043734"}


id: GO:1905828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of prostaglandin catabolic process.","definition_xrefs":["GOC:TermGenie","PMID:12432938","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"regulates","term_name":"prostaglandin catabolic process","termid":"GO:1905344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of prostaglandin catabolic process","synonyms":[{"name":"regulation of prostaglandin breakdown","type":"exact"},{"name":"regulation of prostaglandin catabolism","type":"exact"},{"name":"regulation of prostaglandin degradation","type":"exact"}],"termid":"GO:1905828"}


id: GO:1901021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of calcium ion transmembrane transporter activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of calcium ion transmembrane transporter activity (obsolete GO:1901021)","synonyms":[{"name":"activation of calcium ion transmembrane transporter activity","type":"narrow"},{"name":"up regulation of calcium ion transmembrane transporter activity","type":"exact"},{"name":"up-regulation of calcium ion transmembrane transporter activity","type":"exact"},{"name":"upregulation of calcium ion transmembrane transporter activity","type":"exact"}],"termid":"GO:1901021"}


id: MONDO:0008180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Failure of the soft palate to reach the posterior pharyngeal wall to close the opening between the oral and nasal cavities. Incomplete velopharyngeal closure is primarily related to surgeries (adenoidectomy; cleft palate) or an incompetent palatopharyngeal sphincter. It is characterized by hypernasal speech.","definition_xrefs":["MESH:D014681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital velopharyngeal incompetence","secondary_identifiers":["GARD:5470","OMIM:167500","UMLS:C0042454","icd11.foundation:158386351","Orphanet:2291","MEDGEN:52992"],"synonyms":[{"name":"palatopharyngeal incompetence","type":"related"},{"name":"velopharyngeal incompetence","type":"related"},{"name":"velopharyngeal insufficiency","type":"related"}],"termid":"MONDO:0008180","xrefs":{"Monarch":{"xref_id":"0008180"}}}


id: GO:0007610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The internally coordinated responses (actions or inactions) of animals (individuals or groups) to internal or external stimuli, via a mechanism that involves nervous system activity.","definition_xrefs":["GOC:jl","ISBN:0395448956","PMID:20160973","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavior","secondary_identifiers":["GO:0023032","GO:0044708","Wikipedia:Behavior","GO:0044709"],"synonyms":[{"name":"behavioral response to stimulus","type":"exact"},{"name":"behaviour","type":"exact"},{"name":"behavioural response to stimulus","type":"exact"},{"name":"single-organism behavior","type":"related"}],"termid":"GO:0007610"}


id: GO:0017190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of the N-terminal aspartic acid of proteins; catalyzed by aspartate N-acetyltransferase.","definition_xrefs":["RESID:AA0042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid acetylation","termid":"GO:0006474"},{"relation_name":"is_a","term_name":"peptidyl-aspartic acid modification","termid":"GO:0018197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"N-terminal peptidyl-aspartic acid acetylation","termid":"GO:0017190"}


id: MONDO:0002524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hyperlipoproteinemia type III (obsolete MONDO:0002524)","termid":"MONDO:0002524","xrefs":{"Monarch":{"xref_id":"0002524"}}}


id: GO:0042412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of taurine (2-aminoethanesulfonic acid), a sulphur-containing amino acid derivative important in the metabolism of fats.","definition_xrefs":["ISBN:0198600461","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taurine metabolic process","termid":"GO:0019530"},{"relation_name":"is_a","term_name":"alkanesulfonate biosynthetic process","termid":"GO:0046305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"taurine biosynthetic process","synonyms":[{"name":"taurine anabolism","type":"exact"},{"name":"taurine biosynthesis","type":"exact"},{"name":"taurine formation","type":"exact"},{"name":"taurine synthesis","type":"exact"}],"termid":"GO:0042412"}


id: MONDO:0010244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CGF1","secondary_identifiers":["UMLS:C1848140","MEDGEN:338395","OMIM:300082"],"synonyms":[{"name":"CGF1","type":"exact"},{"name":"cognitive function 1, social","type":"exact"},{"name":"social cognition","type":"exact"}],"termid":"MONDO:0010244","xrefs":{"Monarch":{"xref_id":"0010244"}}}


id: MONDO:0016255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary, benign or malignant neoplasm of the uterine corpus characterized by the presence of an epithelial and a mesenchymal component. Representative examples include adenomyoma, adenosarcoma, and carcinosarcoma.","definition_xrefs":["NCIT:C40181"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare cancer of corpus uteri (obsolete MONDO:0016253)","termid":"MONDO:0016253"},{"relation_name":"is_a","term_name":"mixed neoplasm","termid":"MONDO:0021043"},{"relation_name":"is_a","term_name":"corpus uteri neoplasm","termid":"MONDO:0021254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine corpus mixed epithelial and mesenchymal neoplasm","secondary_identifiers":["GARD:20472","MEDGEN:311425","Orphanet:213589","UMLS:C1519858"],"synonyms":[{"name":"body of uterus mixed neoplasm","type":"exact"},{"name":"malignant mixed epithelial and mesenchymal tumor of corpus uteri","type":"related"},{"name":"malignant mixed epithelial and mesenchymal tumour of corpus uteri","type":"related"},{"name":"mixed epithelial and mesenchymal cancer of corpus uteri","type":"narrow"},{"name":"uterine corpus mixed epithelial and mesenchymal neoplasm","type":"exact"},{"name":"uterine corpus mixed epithelial and mesenchymal tumor","type":"exact"},{"name":"uterine corpus mixed epithelial and mesenchymal tumour","type":"exact"}],"termid":"MONDO:0016255","xrefs":{"Monarch":{"xref_id":"0016255"}}}


id: PBO:0113475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of tRNA-specific adenosine-34 deaminase; forms a heterodimer with Tad2p that converts adenosine to inosine at the wobble position of several tRNAs; localizes to cytosol, nucleus and peroxisomes","termid":"PBO:0113475"}


id: PR:O14156
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein phosphatase 1K, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13832:SF93","PRO:DNx","OMA:SCHPO01064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2C homolog 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.03c","secondary_identifiers":["UniProtKB:O14156"],"synonyms":[{"name":"PP2C-4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPM1K","type":"exact"}],"termid":"PR:O14156"}


id: PBO:0074239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 51 subunit alpha","termid":"PBO:0074239"}


id: MONDO:0002853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal tumor with skeletal muscle differentiation affecting the rectum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectum sarcoma","termid":"MONDO:0002168"},{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"rectum rhabdomyosarcoma","secondary_identifiers":["MEDGEN:235532","UMLS:C1335687","NCIT:C5627","DOID:4053"],"synonyms":[{"name":"rectal rhabdomyosarcoma","type":"exact"},{"name":"rectum rhabdomyosarcoma (disease)","type":"exact"},{"name":"rhabdomyosarcoma (disease) of rectum","type":"exact"},{"name":"rhabdomyosarcoma of rectum","type":"exact"},{"name":"rhabdomyosarcoma of the rectum","type":"exact"}],"termid":"MONDO:0002853","xrefs":{"Monarch":{"xref_id":"0002853"}}}


id: GO:0097098
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An activity that facilitates the base-pairing of single-stranded RNA to double-stranded DNA resulting in the formation of R-loops.","definition_xrefs":["GOC:imk","PMID:21699496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA/RNA hybrid binding","termid":"GO:0071667"},{"relation_name":"is_a","term_name":"annealing activity","termid":"GO:0140666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"DNA/RNA hybrid annealing activity","termid":"GO:0097098"}


id: PBO:0078568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif-containing 51B, pseudogene","termid":"PBO:0078568"}


id: GO:0001097
data:
  {"annotated_genes":["SJAG_00159"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77932],"is_not":false,"summary":null,"term":"GO:0001097"}]},"cv_name":"molecular_function","definition":"Binding to a general RNA polymerase II transcription factor belonging to the TFIIH complex, one of the factors involved in formation of the preinitiation complex (PIC) by RNA polymerase II.","definition_xrefs":["PMID:16858867","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II general transcription initiation factor binding","termid":"GO:0001091"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00159":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"TFIIH-class transcription factor complex binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"TFIIH-class transcription factor binding","type":"exact"}],"termid":"GO:0001097","terms_by_termid":{"GO:0001097":null}}


id: PBO:0034494
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2B-K119_ubiquitination_at_double-strand_break_site","termid":"PBO:0034494"}


id: GO:1901109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of granaticin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"granaticin metabolic process","termid":"GO:1901107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"granaticin biosynthetic process","synonyms":[{"name":"granaticin anabolism","type":"exact"},{"name":"granaticin biosynthesis","type":"exact"},{"name":"granaticin formation","type":"exact"},{"name":"granaticin synthesis","type":"exact"}],"termid":"GO:1901109"}


id: PBO:0007992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase type 2A, intrinsic regulator Rrd1 (predicted)","termid":"PBO:0007992"}


id: GO:0019664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glucose into ethanol, lactate, formate, succinate, and acetate, yielding energy in the form of ATP.","definition_xrefs":["MetaCyc:FERMENTATION-PWY","ISBN:0716720094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose metabolic process","termid":"GO:0006006"},{"relation_name":"is_a","term_name":"ethanol metabolic process","termid":"GO:0006067"},{"relation_name":"is_a","term_name":"acetate metabolic process","termid":"GO:0006083"},{"relation_name":"is_a","term_name":"lactate metabolic process","termid":"GO:0006089"},{"relation_name":"is_a","term_name":"2-oxoglutarate metabolic process","termid":"GO:0006103"},{"relation_name":"is_a","term_name":"succinate metabolic process","termid":"GO:0006105"},{"relation_name":"is_a","term_name":"formate metabolic process","termid":"GO:0015942"},{"relation_name":"is_a","term_name":"glycolytic fermentation","termid":"GO:0019660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281","GO:0006091"],"is_obsolete":false,"name":"mixed acid fermentation","secondary_identifiers":["Wikipedia:Mixed_acid_fermentation"],"synonyms":[{"name":"glucose catabolic process to mixed acids","type":"broad"},{"name":"glucose fermentation to mixed acids","type":"exact"}],"termid":"GO:0019664"}


id: PBO:0043988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSF2RB pseudogene 1","termid":"PBO:0043988"}


id: FYPO:0003516
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-ergothioneine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular L-ergothioneine level during vegetative growth","synonyms":[{"name":"increased L-ergothioneine level during vegetative growth","type":"exact"},{"name":"increased cellular L-ergothioneine level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003516"}


id: PBO:0069913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1205, pseudogene","termid":"PBO:0069913"}


id: GO:0006814
data:
  {"annotated_genes":["SJAG_04616","SJAG_04028","SJAG_04167","SJAG_01541"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036376"},{"annotations":[91186,62014,68797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035725"}]},"cv_name":"biological_process","definition":"The directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01541":null,"SJAG_04028":null,"SJAG_04167":null,"SJAG_04616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"sodium ion transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0006834","GO:0016974"],"synonyms":[{"name":"mitochondrial sodium/calcium ion exchange","type":"narrow"},{"name":"sodium channel auxiliary protein activity","type":"related"},{"name":"sodium transport","type":"exact"},{"name":"sodium/potassium transport","type":"broad"},{"name":"sodium:calcium exchange","type":"narrow"},{"name":"sodium:solute transport","type":"narrow"}],"termid":"GO:0006814","terms_by_termid":{"GO:0035725":null,"GO:0036376":null}}


id: PBO:0082591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis-Golgi t-SNARE syntaxin; required for vesicular transport between the ER and the Golgi complex; binds at least 9 SNARE proteins; plays a role in autophagy by regulating formation of autophagic vesicles in Golgi","termid":"PBO:0082591"}


id: PBO:0117170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHRM1 antisense RNA 1","termid":"PBO:0117170"}


id: PBO:0004011
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Birt-Hogg-Dube syndrome","termid":"PBO:0004011"}


id: GO:0048539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the bone marrow over time, from its formation to the mature structure.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"is_a","term_name":"hematopoietic or lymphoid organ development","termid":"GO:0048534"},{"relation_name":"part_of","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone marrow development","termid":"GO:0048539"}


id: GO:1901402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tetrapyrrole metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole metabolic process","termid":"GO:1901401"},{"relation_name":"negatively_regulates","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"negatively_regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"negative regulation of tetrapyrrole metabolic process","synonyms":[{"name":"down regulation of tetrapyrrole metabolic process","type":"exact"},{"name":"down regulation of tetrapyrrole metabolism","type":"exact"},{"name":"down-regulation of tetrapyrrole metabolic process","type":"exact"},{"name":"down-regulation of tetrapyrrole metabolism","type":"exact"},{"name":"downregulation of tetrapyrrole metabolic process","type":"exact"},{"name":"downregulation of tetrapyrrole metabolism","type":"exact"},{"name":"inhibition of tetrapyrrole metabolic process","type":"narrow"},{"name":"inhibition of tetrapyrrole metabolism","type":"exact"},{"name":"negative regulation of tetrapyrrole metabolism","type":"exact"}],"termid":"GO:1901402"}


id: PBO:0073623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 9","termid":"PBO:0073623"}


id: PBO:0051235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-40-1 (pseudogene)","termid":"PBO:0051235"}


id: GO:0061062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of nematode larval development, the process whose specific outcome is the progression of the nematode larva over time, from its formation to the mature structure. Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew.","definition_xrefs":["GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"regulates","term_name":"nematode larval development","termid":"GO:0002119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nematode larval development","termid":"GO:0061062"}


id: PBO:0064542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 3, pseudogene","termid":"PBO:0064542"}


id: PBO:0058126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4428","termid":"PBO:0058126"}


id: GO:0097189
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vesicle containing parts of a dying cell. Apoptotic bodies can be formed during the execution phase of the apoptotic process, when the cell's cytoskeleton breaks up and causes the membrane to bulge outward. These bulges may separate from the cell, taking a portion of cytoplasm with them, to become apoptotic bodies. These are then engulfed by phagocytic cells, and their components recycled. Apoptotic bodies may range in size from 0.8 to 5um.","definition_xrefs":["Wikipedia:Apoptosis","GOC:vesicles","PMID:15242875","PMID:24223256","GOC:mtg_apoptosis","Wikipedia:Bleb_(cell_biology)"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular vesicle","termid":"GO:1903561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"apoptotic body","synonyms":[{"name":"apoptotic bleb","type":"related"},{"name":"apoptotic vesicle","type":"exact"}],"termid":"GO:0097189"}


id: GO:1905384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to presynapse.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:TermGenie","GOC:PARL","PMID:24449494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to synapse","termid":"GO:1902473"},{"relation_name":"regulates","term_name":"protein localization to presynapse","termid":"GO:1905383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to presynapse","synonyms":[{"name":"regulation of protein localisation in presynapse","type":"exact"},{"name":"regulation of protein localisation to presynapse","type":"exact"},{"name":"regulation of protein localization in presynapse","type":"exact"},{"name":"regulation of recruitment of presynaptic proteins","type":"exact"}],"termid":"GO:1905384"}


id: PBO:0041916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellin 4 precursor","termid":"PBO:0041916"}


id: GO:0033999
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dermatan sulfate = n 4-deoxy-beta-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine 4-sulfate. This reaction is the eliminative cleavage of dermatan sulfate containing 1,4-beta-D-hexosaminyl and 1,3-beta-D-glucurosonyl or 1,3-alpha-L-iduronosyl linkages to disaccharides containing 4-deoxy-beta-D-gluc-4-enuronosyl groups to yield a 4,5-unsaturated dermatan-sulfate disaccharide (DeltaUA-GalNAC-4S). Chondroitin sulfate B is also known as dermatan sulfate.","definition_xrefs":["EC:4.2.2.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"chondroitin B lyase activity","synonyms":[{"name":"ChnB","type":"related"},{"name":"chonB","type":"related"},{"name":"chondroitinase B activity","type":"related"},{"name":"dermatan sulfate lyase activity","type":"exact"}],"termid":"GO:0033999"}


id: GO:2000612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of thyroid-stimulating hormone secretion.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptide hormone secretion","termid":"GO:0090276"},{"relation_name":"regulates","term_name":"thyroid-stimulating hormone secretion","termid":"GO:0070460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"regulation of thyroid-stimulating hormone secretion","synonyms":[{"name":"regulation of TSH secretion","type":"exact"},{"name":"regulation of thyroid stimulating hormone secretion","type":"exact"}],"termid":"GO:2000612"}


id: MONDO:0010676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy, Hemizygous lethal type","secondary_identifiers":["MEDGEN:326552","OMIM:309950","UMLS:C1839671","MESH:C564097"],"synonyms":[{"name":"muscular dystrophy, Hemizygous lethal type","type":"exact"}],"termid":"MONDO:0010676","xrefs":{"Monarch":{"xref_id":"0010676"}}}


id: MOD:01036
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:01181. Remap to MOD:01181.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01036 O-methyl aspartyl (obsolete MOD:01036)","termid":"MOD:01036"}


id: PBO:0055390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2820","termid":"PBO:0055390"}


id: PBO:0053196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper and EF-hand containing transmembrane protein 2","termid":"PBO:0053196"}


id: PBO:0066083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 11","termid":"PBO:0066083"}


id: GO:0052086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont interferes with, inhibits or disrupts the normal execution of the B-cell mediated immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host adaptive immune response","termid":"GO:0039504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host B-cell mediated immune response","secondary_identifiers":["GO:0052281"],"synonyms":[{"name":"down regulation by symbiont of host B-cell mediated immune response","type":"exact"},{"name":"down-regulation by symbiont of host B-cell mediated immune response","type":"exact"},{"name":"downregulation by symbiont of host B-cell mediated immune response","type":"exact"},{"name":"inhibition by symbiont of host B-cell mediated immune response","type":"narrow"},{"name":"negative regulation by organism of B-cell mediated immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"suppression by symbiont of host B-cell mediated immune response","type":"exact"},{"name":"suppression of host B-cell mediated immune response","type":"exact"}],"termid":"GO:0052086"}


id: PBO:0063516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal dependent decarboxylase domain containing 1","termid":"PBO:0063516"}


id: PBO:0066719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 16","termid":"PBO:0066719"}


id: GO:0045171
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A direct connection between the cytoplasm of two cells that is formed following the completion of cleavage furrow ingression during cell division. They are usually present only briefly prior to completion of cytokinesis. However, in some cases, such as the bridges between germ cells during their development, they become stabilised.","definition_xrefs":["PMID:9635420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"intercellular bridge","termid":"GO:0045171"}


id: GO:0032824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of natural killer cell activation","termid":"GO:0032815"},{"relation_name":"is_a","term_name":"regulation of natural killer cell differentiation","termid":"GO:0032823"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte differentiation","termid":"GO:0045620"},{"relation_name":"negatively_regulates","term_name":"natural killer cell differentiation","termid":"GO:0001779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell differentiation","synonyms":[{"name":"down regulation of natural killer cell differentiation","type":"exact"},{"name":"down-regulation of natural killer cell differentiation","type":"exact"},{"name":"downregulation of natural killer cell differentiation","type":"exact"},{"name":"inhibition of natural killer cell differentiation","type":"narrow"},{"name":"negative regulation of NK cell differentiation","type":"exact"},{"name":"negative regulation of natural killer cell development","type":"related"}],"termid":"GO:0032824"}


id: FYPO:0003748
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to nuclear bodies is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to nuclear body","synonyms":[{"name":"abnormal protein localisation to nuclear body","type":"exact"},{"name":"abnormal protein localization to nuclear body during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to nuclear body during vegetative growth","type":"exact"}],"termid":"FYPO:0003748"}


id: GO:0019655
data:
  {"annotated_genes":["SJAG_05006","SJAG_03743","SJAG_03822","SJAG_01414","SJAG_03370","SJAG_00240"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90369,100644,100645,116614,116615],"is_not":false,"summary":null,"term":"GO:0019655"},{"annotations":[98488],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2001172"}]},"cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glucose; it is converted into ethanol and carbon dioxide (CO2), producing two molecules of ATP for each molecule of glucose.","definition_xrefs":["GOC:nr","GOC:dph","ISBN:0716720094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose metabolic process","termid":"GO:0006006"},{"relation_name":"is_a","term_name":"ethanol metabolic process","termid":"GO:0006067"},{"relation_name":"is_a","term_name":"glycolytic fermentation","termid":"GO:0019660"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00240":null,"SJAG_01414":null,"SJAG_03370":null,"SJAG_03743":null,"SJAG_03822":null,"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"glycolytic fermentation to ethanol","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0043458","Wikipedia:Ethanol_fermentation"],"synonyms":[{"name":"alcoholic fermentation","type":"related"},{"name":"ethanol anabolism during fermentation","type":"related"},{"name":"ethanol biosynthetic process involved in glucose fermentation to ethanol","type":"related"},{"name":"ethanol fermentation","type":"exact"},{"name":"ethanol formation during fermentation","type":"related"},{"name":"ethanol synthesis during fermentation","type":"related"},{"name":"glucose catabolic process to ethanol","type":"exact"},{"name":"glucose fermentation to ethanol","type":"exact"}],"termid":"GO:0019655","terms_by_termid":{"GO:0019655":null,"GO:2001172":null}}


id: PBO:0076608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1D26 antisense RNA 1","termid":"PBO:0076608"}


id: PBO:0076831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere repeat binding bouquet formation protein 2","termid":"PBO:0076831"}


id: PBO:0038385
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_parasitoid","termid":"PBO:0038385"}


id: MONDO:0006485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually aggressive malignant neoplasm arising from the uterine corpus and less often the cervix. It is characterized by the presence of two components: a malignant epithelial component and a sarcomatous component. In the uterine corpus the epithelial component is usually glandular whereas in the cervix is usually non-glandular. Carcinosarcoma of the cervix, although it is aggressive, it may have a better prognosis compared to the uterine corpus carcinosarcoma.","definition_xrefs":["NCIT:C42700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine cancer","termid":"MONDO:0002715"},{"relation_name":"is_a","term_name":"carcinosarcoma","termid":"MONDO:0002928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine carcinosarcoma","secondary_identifiers":["MEDGEN:83678","EFO:1000613","MESH:D012192","DOID:6171","ONCOTREE:UCS","SCTID:702369008","UMLS:C0280630"],"synonyms":[{"name":"carcinosarcoma of the uterus","type":"exact"},{"name":"malignant mixed mesodermal (Mullerian) tumor of the uterus","type":"exact"},{"name":"malignant mixed mesodermal (Mullerian) tumour of the uterus","type":"exact"},{"name":"malignant mixed mesodermal (Müllerian) tumor of the uterus","type":"exact"},{"name":"malignant mixed mesodermal (Müllerian) tumour of the uterus","type":"exact"},{"name":"mixed mullerian sarcoma of uterus","type":"exact"},{"name":"uterine carcinosarcoma","type":"exact"},{"name":"uterine carcinosarcoma/uterine malignant mixed mullerian tumor","type":"related"},{"name":"uterine carcinosarcoma/uterine malignant mixed mullerian tumour","type":"related"},{"name":"uterine malignant mixed mesodermal (Mullerian) tumor","type":"exact"},{"name":"uterine malignant mixed mesodermal (Mullerian) tumour","type":"exact"},{"name":"uterine malignant mixed mesodermal (Müllerian) tumor","type":"exact"},{"name":"uterine malignant mixed mesodermal (Müllerian) tumour","type":"exact"},{"name":"uterus carcinosarcoma","type":"exact"}],"termid":"MONDO:0006485","xrefs":{"Monarch":{"xref_id":"0006485"}}}


id: PR:O43017
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swd3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"set1 complex component swd3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.03","synonyms":[{"name":"COMPASS component swd3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Set1C component swd3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-swd3","type":"exact"},{"name":"complex proteins associated with set1 protein swd3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43017"}


id: PR:O14086
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase I subunit RPA49 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit rpa49 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.03c","secondary_identifiers":["UniProtKB:O14086"],"synonyms":[{"name":"DNA-directed RNA polymerase I 49 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase I subunit A49 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR1E","type":"exact"}],"termid":"PR:O14086"}


id: PR:P87323
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcs4 gene.","definition_xrefs":["UniProtKB:P87323","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"response regulator mcs4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.10","synonyms":[{"name":"Spom972h-mcs4","type":"exact"},{"name":"mitotic catastrophe suppressor 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87323"}


id: PBO:0047239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 234 member A","termid":"PBO:0047239"}


id: PBO:0043824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase Q","termid":"PBO:0043824"}


id: PBO:0057792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3118-1","termid":"PBO:0057792"}


id: GO:0047415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(2)-benzoyl-D-arginine-4-nitroanilide + H2O = 4-nitroaniline + N(2)-benzoyl-D-arginine + H+.","definition_xrefs":["RHEA:14421","EC:3.5.1.72"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-benzoylarginine-4-nitroanilide amidase activity","secondary_identifiers":["KEGG_REACTION:R04113","MetaCyc:3.5.1.72-RXN"],"synonyms":[{"name":"D-BAPA-ase activity","type":"related"},{"name":"N-benzoyl-D-arginine-4-nitroanilide amidohydrolase activity","type":"related"},{"name":"benzoyl-D-arginine arylamidase activity","type":"related"}],"termid":"GO:0047415"}


id: PBO:0017889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc4/UbcP1","termid":"PBO:0017889"}


id: PBO:0088270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L51-b","termid":"PBO:0088270"}


id: PBO:0088328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V1 subunit E","termid":"PBO:0088328"}


id: PBO:0046820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FA core complex associated protein 24","termid":"PBO:0046820"}


id: GO:0021887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a hypothalamus neuron that releases gonadotrophin-releasing hormone.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"hypothalamus gonadotrophin-releasing hormone neuron differentiation","termid":"GO:0021886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypothalamus gonadotrophin-releasing hormone neuron fate commitment","synonyms":[{"name":"hypothalamus gonadotropin-releasing hormone neuron fate commitment","type":"related"}],"termid":"GO:0021887"}


id: PBO:0075926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 18","termid":"PBO:0075926"}


id: MONDO:1012074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple exostoses, non-human animal","termid":"MONDO:1011944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple exostoses, horse","secondary_identifiers":["OMIA:000354-9796"],"termid":"MONDO:1012074","xrefs":{"Monarch":{"xref_id":"1012074"}}}


id: MONDO:0010393
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-syndromic X-linked intellectual disability in which the cause of the disease is a mutation in the BRWD3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 93","secondary_identifiers":["MESH:C567066","OMIM:300659","DOID:0112045","UMLS:C1970841","MEDGEN:410164"],"synonyms":[{"name":"BRWD3 non-syndromic X-linked intellectual disability","type":"exact"},{"name":"MRX93","type":"related"},{"name":"intellectual developmental disorder, X-linked 93, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked 93","type":"exact"},{"name":"intellectual disability, X-linked type 93","type":"exact"},{"name":"intellectual disability, X-linked, with macrocephaly","type":"related"},{"name":"mental retardation, X-linked 93","type":"related"},{"name":"mental retardation, X-linked type 93","type":"exact"},{"name":"mental retardation, X-linked, with macrocephaly","type":"related"},{"name":"non-syndromic X-linked intellectual disability caused by mutation in BRWD3","type":"exact"}],"termid":"MONDO:0010393","xrefs":{"Monarch":{"xref_id":"0010393"}}}


