# terms

id: PBO:0086779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; YDR524C-B has a paralog, YCL048W-A, that arose from the whole genome duplication","termid":"PBO:0086779"}


id: GO:0102352
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + a 1,2-diacyl-sn-glycerol 3-phosphate = ADP + a 1,2-diacyl-sn-glycerol 3-diphosphate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidate kinase activity (obsolete GO:0102352)","termid":"GO:0102352"}


id: PBO:0026833
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_poly(U)_RNA_binding","termid":"PBO:0026833"}


id: PBO:0082401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of the capping protein heterodimer (Cap1p and Cap2p); capping protein (CP) binds to the barbed ends of actin filaments preventing further polymerization; localized predominantly to cortical actin patches; protein increases in abundance and relocalizes from bud neck to plasma membrane upon DNA replication stress","termid":"PBO:0082401"}


id: PR:P28706
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein complementing XP-G cells that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.08c","secondary_identifiers":["UniProtKB:P28706"],"synonyms":[{"name":"SPBC3E7.08c","type":"related"},{"name":"Spom972h-ERCC5","type":"exact"}],"termid":"PR:P28706"}


id: PBO:0082855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of transport protein particle (TRAPP) complexes I-III; TRAPP complexes are related multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII)","termid":"PBO:0082855"}


id: GO:0031782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 4 melanocortin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocortin receptor binding","termid":"GO:0031779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 4 melanocortin receptor binding","synonyms":[{"name":"type 4 melanocortin receptor ligand","type":"narrow"}],"termid":"GO:0031782"}


id: PBO:0086815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YLR156W, YLR159W, and YLR161W are three identical open reading frames in S288C encoded near the ribosomal DNA region of chromosome 12; YLR159W has a paralog, YLR156W, that arose from a segmental duplication","termid":"PBO:0086815"}


id: PBO:0061690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 205","termid":"PBO:0061690"}


id: PBO:0005123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set1","termid":"PBO:0005123"}


id: GO:0034168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 10 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 10 signaling pathway","termid":"GO:0034167"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 10 signaling pathway","termid":"GO:0034166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 10 signaling pathway","synonyms":[{"name":"negative regulation of TLR10 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 10 signalling pathway","type":"exact"}],"termid":"GO:0034168"}


id: MONDO:1010906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Central core myopathy that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central core myopathy, non-human animal","termid":"MONDO:1010192"},{"relation_name":"is_a","term_name":"congenital myopathy, dog","termid":"MONDO:1010918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central core myopathy, dog","secondary_identifiers":["OMIA:000172-9615"],"termid":"MONDO:1010906","xrefs":{"Monarch":{"xref_id":"1010906"}}}


id: GO:0051233
data:
  {"annotated_genes":["SJAG_00697","SJAG_02266","SJAG_03073","SJAG_04841","SJAG_01805","SJAG_00082","SJAG_00723","SJAG_02542","SJAG_01371","SJAG_02336","SJAG_04140","SJAG_03048","SJAG_04745","SJAG_00930","SJAG_01297","SJAG_01429","SJAG_02045","SJAG_04412","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[118669,103356,120718,105470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990385"},{"annotations":[78942,102458,91490,80614,92851,110213,120720,113173,113877,102974,104283,95674,93258,91858,118670,119582,78019,105472,96665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990023"}]},"cv_name":"cellular_component","definition":"The area in the center of the spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["GOC:ai","PMID:15296749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spindle","termid":"GO:0005819"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00697":null,"SJAG_00723":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_01371":null,"SJAG_01429":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02045":null,"SJAG_02266":null,"SJAG_02336":null,"SJAG_02542":null,"SJAG_03048":null,"SJAG_03073":null,"SJAG_04140":null,"SJAG_04412":null,"SJAG_04745":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"spindle midzone","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"central spindle","type":"exact"},{"name":"spindle equator","type":"exact"}],"termid":"GO:0051233","terms_by_termid":{"GO:1990023":null,"GO:1990385":null}}


id: PBO:0078882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily V member 5","termid":"PBO:0078882"}


id: PR:000050251
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein rho2 (Schizosaccharomyces pombe) that is non-covalently bound to GTP.","definition_xrefs":["PMID:26960792","PomBase:MAH","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding protein rho2 (Schizosaccharomyces pombe)","termid":"PR:000050250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho2</GTP+","pombase_gene_id":"SPAC16.01","synonyms":[{"name":"PomBase_original_PRO_term_name: GTP-binding protein rho2, GTP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rho2/GTP+","type":"exact"},{"name":"rho2</GTP+","type":"exact"}],"termid":"PR:000050251"}


id: PBO:0056273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 1B member 1","termid":"PBO:0056273"}


id: PATO:0000599
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A width which is relatively small.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"},{"relation_name":"is_a","term_name":"width","termid":"PATO:0000921"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased width","synonyms":[{"name":"narrow","type":"related"}],"termid":"PATO:0000599"}


id: FYPO:0003650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to glucose starvation is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein level during cellular response to glucose starvation","synonyms":[{"name":"decreased protein accumulation during cellular response to glucose starvation","type":"related"},{"name":"decreased protein level during cellular response to glucose depletion","type":"exact"},{"name":"decreased protein level during cellular response to glucose deprivation","type":"exact"},{"name":"decreased protein level during cellular response to glucose limitation","type":"related"},{"name":"decreased protein level during cellular response to glucose starvation during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to glucose starvation during vegetative growth","type":"exact"},{"name":"decreased protein level during glucose starvation","type":"exact"},{"name":"reduced protein level during cellular response to glucose starvation","type":"exact"}],"termid":"FYPO:0003650"}


id: GO:0150179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylserine metabolic process.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:30074985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylserine metabolic process","termid":"GO:0150178"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid metabolic process","termid":"GO:1903727"},{"relation_name":"positively_regulates","term_name":"phosphatidylserine metabolic process","termid":"GO:0006658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphatidylserine metabolic process","termid":"GO:0150179"}


id: FYPO:0003973
data:
  {"alleles_by_uniquename":{"SJAG_01374:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01374","name":"nup132delta","uniquename":"SJAG_01374:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121355],"is_not":false,"summary":null,"term":"FYPO:0003973"}]},"cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which nuclear pore localization is abnormal, resulting in an abnormal spatial arrangement of nuclear pores within the nuclear envelope.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleus organization","termid":"FYPO:0000810"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01374":null},"genotype_count":1,"genotypes_by_uniquename":{"nup132delta":{"display_name":"nup132delta","display_uniquename":"nup132delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01374:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal nuclear pore localization","references_by_uniquename":{"PMID:33495454":null},"single_locus_annotated_genes":["SJAG_01374"],"single_locus_genotype_uniquenames":["nup132delta"],"synonyms":[{"name":"abnormal NPC localization","type":"exact"},{"name":"abnormal nuclear pore complex localization","type":"exact"},{"name":"abnormal nuclear pore distribution","type":"exact"},{"name":"abnormal nuclear pore localisation","type":"exact"},{"name":"abnormal nuclear pore localization during mitotic cell cycle","type":"related"},{"name":"abnormal nuclear pore localization during vegetative growth","type":"exact"}],"termid":"FYPO:0003973","terms_by_termid":{"FYPO:0003973":null}}


id: PBO:0059293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L44","termid":"PBO:0059293"}


id: MONDO:0020708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodegenerative condition characterized by asymmetric weakness in the upper extremities resulting from segmental lower motor neuron dysfunction.","definition_xrefs":["NCIT:C133085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegenerative disease","termid":"MONDO:0005559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"brachial amyotrophic diplegia","secondary_identifiers":["UMLS:C4522181","MEDGEN:1617621"],"synonyms":[{"name":"BAD","type":"broad"},{"name":"FAS","type":"exact"},{"name":"brachial amyotrophic diplegia","type":"exact"},{"name":"flail arm syndrome","type":"exact"},{"name":"man-in-barrel syndrome","type":"exact"}],"termid":"MONDO:0020708","xrefs":{"Monarch":{"xref_id":"0020708"}}}


id: PBO:0040297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP2B1 antisense RNA 1","termid":"PBO:0040297"}


id: GO:0015740
data:
  {"annotated_genes":["SJAG_02011","SJAG_00671","SJAG_01406","SJAG_00522","SJAG_02140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070778"},{"annotations":[103585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098714"},{"annotations":[68911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071423"},{"annotations":[64910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015743"},{"annotations":[90275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990555"},{"annotations":[103587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098720"}]},"cv_name":"biological_process","definition":"The directed movement of a C4-dicarboxylate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A C4-dicarboxylate is the anion of a dicarboxylic acid that contains four carbon atoms.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00671":null,"SJAG_01406":null,"SJAG_02011":null,"SJAG_02140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"C4-dicarboxylate transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0015740","terms_by_termid":{"GO:0015743":null,"GO:0070778":null,"GO:0071423":null,"GO:0098714":null,"GO:0098720":null,"GO:1990555":null}}


id: PBO:0071491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 32","termid":"PBO:0071491"}


id: PBO:0117206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sulfite efflux transmembrane transporter Ssu1","termid":"PBO:0117206"}


id: PBO:0070346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 19","termid":"PBO:0070346"}


id: PBO:0067056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 77, pseudogene","termid":"PBO:0067056"}


id: MONDO:0024953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A departure from the normal gait in animals.","definition_xrefs":["MESH:D007794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lameness, non-human animal","synonyms":[{"name":"Gait disorder, animal","type":"related"},{"name":"Gait disorders, animal","type":"related"},{"name":"Lamenesses, animal","type":"related"},{"name":"animal Gait disorder","type":"related"},{"name":"animal Gait disorders","type":"related"},{"name":"animal Lamenesses","type":"related"},{"name":"animal lameness","type":"related"},{"name":"disorder, animal Gait","type":"related"},{"name":"disorders, animal Gait","type":"related"}],"termid":"MONDO:0024953","xrefs":{"Monarch":{"xref_id":"0024953"}}}


id: GO:0051405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the digestion of native collagen in the triple helical region at Xaa-Gly bonds.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete microbial collagenase activity (obsolete GO:0051405)","synonyms":[{"name":"Achromobacter iophagus collagenase","type":"related"},{"name":"Clostridium histolyticum collagenase activity","type":"narrow"},{"name":"Clostridium histolyticum proteinase A","type":"related"},{"name":"aspergillopeptidase C","type":"related"},{"name":"azocollase activity","type":"related"},{"name":"clostridiopeptidase A activity","type":"exact"},{"name":"clostridiopeptidase I","type":"related"},{"name":"clostridiopeptidase II","type":"related"},{"name":"collagen peptidase activity","type":"related"},{"name":"collagen protease activity","type":"related"},{"name":"collagenase 1 activity","type":"exact"},{"name":"collagenase A activity","type":"exact"},{"name":"collagenase I activity","type":"related"},{"name":"collagenase MMP-1","type":"related"},{"name":"kollaza","type":"related"},{"name":"matrix metalloproteinase-1","type":"related"},{"name":"matrix metalloproteinase-18","type":"related"},{"name":"matrix metalloproteinase-8","type":"related"},{"name":"metallocollagenase activity","type":"related"},{"name":"metalloproteinase-1","type":"related"},{"name":"microbial collagenase activity","type":"exact"},{"name":"nucleolysin","type":"related"},{"name":"soycollagestin","type":"related"}],"termid":"GO:0051405"}


id: MONDO:0020422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aortopulmonary coronary arterial course is a rare coronary artery congenital malformation characterized by anomalous origin of the coronary artery from the contralateral sinus of Valsalva with course between the aorta and the pulmonary artery. The anomaly is associated with increased risk of sudden cardiac death, especially during exercise.","definition_xrefs":["Orphanet:99086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery congenital malformation","termid":"MONDO:0015203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortopulmonary coronary arterial course","secondary_identifiers":["UMLS:C4757971","MEDGEN:1668023"],"termid":"MONDO:0020422","xrefs":{"Monarch":{"xref_id":"0020422"}}}


id: PBO:0059775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 1","termid":"PBO:0059775"}


id: PBO:0073408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 11","termid":"PBO:0073408"}


id: PBO:0083137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual-specificity ser/thr and tyrosine protein kinase; roles in chromosome segregation, meiotic entry, genome stability, phosphorylation-dependent protein degradation (Rcn1p and Cdc6p), inhibition of protein kinase A, transcriptional regulation, inhibition of RNA pol III, calcium stress and inhibition of Clb2p-Cdc28p after nuclear division; MCK1 has a paralog, YGK3, that arose from the whole genome duplication","termid":"PBO:0083137"}


id: PR:O94703
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase I subunit RPA12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04551","PRO:DNx","PANTHER:PTHR11239:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit RPA12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.03","secondary_identifiers":["UniProtKB:O94703"],"synonyms":[{"name":"DNA-directed RNA polymerase I 13.1 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ZNRD1","type":"exact"}],"termid":"PR:O94703"}


id: GO:0008131
data:
  {"annotated_genes":["SJAG_02496"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[82154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003884"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a primary methyl amine + H2O + O2 = an aldehyde + H2O2 + NH4+.","definition_xrefs":["RHEA:16153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor","termid":"GO:0016641"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"primary methylamine oxidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:1.4.3.21","Reactome:R-HSA-141186","GO:0008122","GO:0004041","KEGG_REACTION:R01853","Reactome:R-HSA-374909","Reactome:R-HSA-141200","Reactome:R-HSA-141202","Reactome:R-HSA-379395","Reactome:R-HSA-5603108","Reactome:R-HSA-5696146","Reactome:R-HSA-5696183","MetaCyc:RXN-9597","Reactome:R-HSA-379382"],"synonyms":[{"name":"amine oxidase (copper-containing) activity","type":"narrow"},{"name":"amine oxidase activity","type":"broad"},{"name":"primary amine oxidase activity","type":"related"},{"name":"primary-amine:oxygen oxidoreductase (deaminating) activity","type":"exact"}],"termid":"GO:0008131","terms_by_termid":{"GO:0003884":null}}


id: GO:0047831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ornithine = (2R,4S)-2,4-diaminopentanoate.","definition_xrefs":["RHEA:14893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular aminotransferase activity","termid":"GO:0016869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"D-ornithine 4,5-aminomutase activity","secondary_identifiers":["MetaCyc:ORNMUTST-RXN","KEGG_REACTION:R02461","EC:5.4.3.5"],"synonyms":[{"name":"D-alpha-ornithine 5,4-aminomutase activity","type":"related"},{"name":"D-ornithine aminomutase activity","type":"related"}],"termid":"GO:0047831"}


id: PATO:0002170
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being split asymmetrically on one side.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"split","termid":"PATO:0001786"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"split laterally","termid":"PATO:0002170"}


id: GO:0046386
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[81277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxyribose phosphate, the phosphorylated sugar 2-deoxy-erythro-pentose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribose phosphate metabolic process","termid":"GO:0019692"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deoxyribose phosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribose phosphate breakdown","type":"exact"},{"name":"deoxyribose phosphate catabolism","type":"exact"},{"name":"deoxyribose phosphate degradation","type":"exact"}],"termid":"GO:0046386","terms_by_termid":{"GO:0035863":null,"GO:0046081":null}}


id: PATO:0000394
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An intensity which is less than moderate in type or degree or effect or force.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intensity","termid":"PATO:0000049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mild intensity","termid":"PATO:0000394"}


id: GO:0006788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the loss of electrons from one or more atoms in heme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme metabolic process","termid":"GO:0042168"},{"relation_name":"part_of","term_name":"porphyrin-containing compound catabolic process","termid":"GO:0006787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"heme oxidation","synonyms":[{"name":"haem oxidation","type":"exact"}],"termid":"GO:0006788"}


id: PBO:0071235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 76","termid":"PBO:0071235"}


id: PBO:0044848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 131C (pseudogene)","termid":"PBO:0044848"}


id: PBO:0071843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 38","termid":"PBO:0071843"}


id: PBO:0063390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCD6-AHRR readthrough (NMD candidate)","termid":"PBO:0063390"}


id: PR:O74388
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- far10 gene.","definition_xrefs":["UniProtKB:O74388","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3H7.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.13","synonyms":[{"name":"Spom972h-far10","type":"exact"}],"termid":"PR:O74388"}


id: PBO:0066097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS protein activator like 2","termid":"PBO:0066097"}


id: PBO:0028847
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_splicing","termid":"PBO:0028847"}


id: PBO:0050418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein D pseudogene 2","termid":"PBO:0050418"}


id: MOD:00642
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct of a residue with 4-hydroxynonenal artificially reduced by a reagent such as NaBH4.","definition_xrefs":["PubMed:11910026","PubMed:15133838","Unimod:335"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"4-hydroxynonenal adduct","termid":"MOD:00446"},{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"reduced 4-hydroxynonenal adduct","synonyms":[{"name":"HNE+Delta:H(2)","type":"related"},{"name":"reduced 4-Hydroxynonenal","type":"related"}],"termid":"MOD:00642"}


id: PBO:0002121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"14-3-3 protein Rad25","termid":"PBO:0002121"}


id: PBO:0045214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C7","termid":"PBO:0045214"}


id: MONDO:0004324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that arises from the testis and is characterized by the presence of fusiform cells and collagenization.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular sex cord-stromal neoplasm","termid":"MONDO:0003125"},{"relation_name":"is_a","term_name":"fibroma","termid":"MONDO:0005167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular fibroma","secondary_identifiers":["MEDGEN:308256","DOID:7675","NCIT:C39951","UMLS:C1515282"],"termid":"MONDO:0004324","xrefs":{"Monarch":{"xref_id":"0004324"}}}


id: GO:0006023
data:
  {"annotated_genes":["SJAG_04868","SJAG_03723","SJAG_02845","SJAG_04728","SJAG_00442","SJAG_00978"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80127,112025,76001,73690,76211,72753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006031"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aminoglycans, any polymer containing amino groups that consists of more than about 10 monosaccharide residues joined to each other by glycosidic linkages.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycan metabolic process","termid":"GO:0006022"},{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_00978":null,"SJAG_02845":null,"SJAG_03723":null,"SJAG_04728":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aminoglycan biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"aminoglycan anabolism","type":"exact"},{"name":"aminoglycan biosynthesis","type":"exact"},{"name":"aminoglycan formation","type":"exact"},{"name":"aminoglycan synthesis","type":"exact"}],"termid":"GO:0006023","terms_by_termid":{"GO:0006031":null}}


id: PBO:0048564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated, gamma adaptin ear containing, ARF binding protein 2","termid":"PBO:0048564"}


id: PBO:0031165
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutamine_import","termid":"PBO:0031165"}


id: GO:2000863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of estrogen secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid hormone secretion","termid":"GO:2000833"},{"relation_name":"is_a","term_name":"regulation of estrogen secretion","termid":"GO:2000861"},{"relation_name":"positively_regulates","term_name":"estrogen secretion","termid":"GO:0035937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of estrogen secretion","synonyms":[{"name":"positive regulation of oestrogen secretion","type":"related"}],"termid":"GO:2000863"}


id: PBO:0035775
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short_disorganized_microtubule_bundle","termid":"PBO:0035775"}


id: GO:0140928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of non-mineral tissue, by preventing mineralization of non-skeletal tissue.","definition_xrefs":["PMID:30030150","PMID:21490328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue homeostasis","termid":"GO:0001894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inhibition of non-skeletal tissue mineralization","synonyms":[{"name":"inhibition of ectopic tissue mineralization","type":"narrow"}],"termid":"GO:0140928"}


id: PBO:0078757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase activator subunit 11-2","termid":"PBO:0078757"}


id: PBO:0050920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFITM3 pseudogene 3","termid":"PBO:0050920"}


id: MONDO:0031213
data:
  {"annotated_genes":["SJAG_03396"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800042"}]},"cv_name":"mondo","definition":"A congenital genodermatosis with skin/mucosae involvement, characterized by very tight and thin skin with erosions and scaling, associated to a typical facial dysmorphism, arthrogryposis multiplex, fetal akinesia or hypokinesia deformation sequence (FADS) and pulmonary hypoplasia without neurological abnormalities.","definition_xrefs":["Orphanet:1662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03396":null},"genotype_count":0,"is_obsolete":false,"name":"restrictive dermopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060762","GARD:1516","OMIMPS:275210","MEDGEN:98356","UMLS:C0406585"],"synonyms":[{"name":"hyperkeratosis-contracture syndrome","type":"narrow"},{"name":"lethal hyperkeratosis-contracture syndrome","type":"exact"},{"name":"lethal restrictive dermopathy","type":"exact"},{"name":"lethal tight skin-contracture syndrome","type":"exact"},{"name":"tight skin contracture syndrome","type":"exact"}],"termid":"MONDO:0031213","terms_by_termid":{"MONDO:0800042":null},"xrefs":{"Monarch":{"xref_id":"0031213"}}}


id: PBO:0083759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential helicase component of heterohexameric MCM2-7 complexes; MCM2-7 complexes bind pre-replication complexes on DNA and melt DNA prior to replication; forms an Mcm4p-6p-7p subcomplex; shows nuclear accumulation in G1; homolog of S. pombe Cdc21p","termid":"PBO:0083759"}


id: PBO:0071208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 49","termid":"PBO:0071208"}


id: PBO:0040548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2","termid":"PBO:0040548"}


id: GO:0051472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucosylglycerol, alpha-D-glucopyranosyl-alpha-(1,2)-glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"alditol metabolic process","termid":"GO:0019400"},{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"glucosylglycerol metabolic process","synonyms":[{"name":"glucosylglycerol metabolism","type":"exact"}],"termid":"GO:0051472"}


id: MOD:01127
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:01166. Remap to MOD:01166.","definition_xrefs":["DeltaMass:292"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01127 5'phos Uridinyl (obsolete MOD:01127)","termid":"MOD:01127"}


id: PBO:0031402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_polarity","termid":"PBO:0031402"}


id: PBO:0072874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine/spermine N1-acetyl transferase like 1","termid":"PBO:0072874"}


id: GO:2001023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to drug.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to xenobiotic stimulus","termid":"GO:0009410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to drug","synonyms":[{"name":"regulation of drug resistance","type":"related"},{"name":"regulation of drug susceptibility/resistance","type":"related"}],"termid":"GO:2001023"}


id: PBO:0088379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokinetic formin Cdc12","termid":"PBO:0088379"}


id: GO:0031570
data:
  {"annotated_genes":["SJAG_04332","SJAG_00327","SJAG_01429","SJAG_03898","SJAG_03160","SJAG_04671","SJAG_03529","SJAG_00486","SJAG_03720","SJAG_01605","SJAG_02026","SJAG_01146","SJAG_01708","SJAG_01044","SJAG_04140","SJAG_01010","SJAG_04287","SJAG_02576","SJAG_01076","SJAG_01873","SJAG_01205","SJAG_03695","SJAG_04280","SJAG_02098","SJAG_02074","SJAG_03942","SJAG_00429","SJAG_00623","SJAG_00364","SJAG_01680","SJAG_02266","SJAG_02563","SJAG_03048","SJAG_03927","SJAG_05373","SJAG_01677","SJAG_01855","SJAG_00640","SJAG_03026","SJAG_00169","SJAG_02771","SJAG_01084"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044778"},{"annotations":[108571,93309,118060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[116467,118007,118235,81925,113183,95444,79868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044773"},{"annotations":[114021,95847,108574,118810,119287,119115,111290,118062,102463,101106,74091,72875,81307,76666,80715,93310,101273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[111646,93187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[90989,108575,111291,102977,62305,77022,101275,67814,81180,113715,60765,74093,93311,119028,61476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[118064,97914,102783,113716,80717,90990,108576,114022,93312,91036,81092,101276,81179,96436,76103,92318,75669,104293,109624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"}]},"cv_name":"biological_process","definition":"A signaling process that controls cell cycle progression in response to changes in DNA structure by monitoring the integrity of the DNA. The DNA integrity checkpoint begins with detection of DNA damage, defects in DNA structure or DNA replication, and progresses through signal transduction and ends with cell cycle effector processes.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00429":null,"SJAG_00486":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01084":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01708":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02026":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03529":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03898":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0023052","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"DNA integrity checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0072401"],"synonyms":[{"name":"DNA integrity checkpoint","type":"exact"},{"name":"signal transduction involved in DNA integrity checkpoint","type":"exact"}],"termid":"GO:0031570","terms_by_termid":{"GO:0007095":null,"GO:0031571":null,"GO:0031573":null,"GO:0033314":null,"GO:0033315":null,"GO:0044773":null,"GO:0044778":null}}


id: MONDO:0020250
data:
  {"annotated_genes":["SJAG_02656","SJAG_02384","SJAG_02848","SJAG_02641"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008134"},{"annotations":[87289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008133"},{"annotations":[87497,87498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012543"},{"annotations":[88461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007429"}]},"cv_name":"mondo","definition":"An autosomal dominant hereditary condition characterized by optic atrophy and progressive visual loss.","definition_xrefs":["NCIT:C84577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary optic neuropathy","termid":"MONDO:0020249"},{"relation_name":"is_a","term_name":"hereditary optic atrophy","termid":"MONDO:0043878"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02384":null,"SJAG_02641":null,"SJAG_02656":null,"SJAG_02848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"autosomal dominant optic atrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4551508","GARD:11972","MESH:D029241","SCTID:2065009","MEDGEN:1647918","Orphanet:98672"],"synonyms":[{"name":"ADOA","type":"exact"},{"name":"DOA","type":"exact"},{"name":"dominant optic atrophy","type":"related"},{"name":"optic atrophy, autosomal dominant","type":"exact"}],"termid":"MONDO:0020250","terms_by_termid":{"MONDO:0007429":null,"MONDO:0008133":null,"MONDO:0008134":null,"MONDO:0012543":null},"xrefs":{"Monarch":{"xref_id":"0020250"}}}


id: PBO:0028048
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_cytoplasmic_interphase_microtubules","termid":"PBO:0028048"}


id: FYPO:0006822
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable and elongates at a normal rate, but divides when a shorter time than normal has elapsed since the previous cell division. Daughter cells therefore have an abnormally low volume. Note that these small viable cells result from a cell cycle size regulation defect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"premature mitosis","termid":"FYPO:0001046"},{"relation_name":"has_part","term_name":"normal vegetative cell growth rate","termid":"FYPO:0006819"},{"relation_name":"is_a","term_name":"viable small vegetative cell","termid":"FYPO:0000648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000257","FYPO:0000337","FYPO:0000005","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"viable small vegetative cell with normal cell growth rate","synonyms":[{"name":"mitosis with small cell size and normal cell growth rate","type":"related"},{"name":"reduced size at cell division with normal cell growth rate","type":"related"},{"name":"small viable vegetative cell with normal cell growth rate","type":"exact"},{"name":"viable small cell with normal cell growth rate during vegetative growth","type":"exact"},{"name":"viable small vegetative cell with normal cell growth rate","type":"broad"},{"name":"viable small vegetative cell with normal cell growth rate during mitotic cell cycle","type":"related"},{"name":"viable small vegetative cell with premature mitosis","type":"exact"},{"name":"wee","type":"exact"}],"termid":"FYPO:0006822"}


id: PBO:0071886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 24","termid":"PBO:0071886"}


id: GO:0015786
data:
  {"annotated_genes":["SJAG_04162","SJAG_04406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76822],"is_not":false,"summary":null,"term":"GO:0015786"},{"annotations":[114363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120112"}]},"cv_name":"biological_process","definition":"The process in which UDP-glucose is transported across a membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transport","termid":"GO:0090481"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04162":null,"SJAG_04406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"UDP-glucose transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0015786","terms_by_termid":{"GO:0015786":null,"GO:0120112":null}}


id: PBO:0035739
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_protein_movement_within_plasma_membrane_at_cell_side","termid":"PBO:0035739"}


id: PBO:0075272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 25","termid":"PBO:0075272"}


id: PBO:0048804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha z","termid":"PBO:0048804"}


id: GO:0043737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage at apurinic or apyrimidinic sites to products with a 5'-phosphate.","definition_xrefs":["EC:3.1.21.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0140097","GO:0016788"],"is_obsolete":false,"name":"deoxyribonuclease V activity","secondary_identifiers":["MetaCyc:3.1.21.7-RXN"],"synonyms":[{"name":"DNase V activity","type":"related"},{"name":"Escherichia coli endodeoxyribonuclease V activity","type":"narrow"},{"name":"endodeoxyribonuclease V","type":"exact"},{"name":"endonuclease V activity","type":"broad"}],"termid":"GO:0043737"}


id: GO:0047507
data:
  {"annotated_genes":["SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004798"},{"annotations":[120049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120136"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2'-deoxyribonucleoside 5'-phosphate + ATP = a 2'-deoxyribonucleoside 5'-diphosphate + ADP.","definition_xrefs":["RHEA:11216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"deoxynucleoside phosphate kinase activity, ATP as phosphate donor","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.4.13","MetaCyc:DEOXYNUCLEOSIDE-PHOSPHATE-KINASE-RXN"],"synonyms":[{"name":"ATP:deoxynucleoside-phosphate phosphotransferase activity","type":"related"},{"name":"deoxynucleoside monophosphate kinase activity","type":"related"},{"name":"deoxynucleoside-5'-monophosphate kinase activity","type":"related"},{"name":"deoxynucleoside-phosphate kinase activity","type":"broad"},{"name":"deoxyribonucleoside monophosphokinase activity","type":"related"}],"termid":"GO:0047507","terms_by_termid":{"GO:0004798":null,"GO:0120136":null}}


id: GO:0038151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the C-C chemokine CCL2 to a C-C chemokine type 2 receptor (CCR2) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine (C-C motif) ligand 2 signaling pathway","termid":"GO:0038148"},{"relation_name":"is_a","term_name":"C-C chemokine receptor CCR2 signaling pathway","termid":"GO:0038150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"CCL2-activated CCR2 signaling pathway","synonyms":[{"name":"CCL2/CCR2 signaling pathway","type":"exact"}],"termid":"GO:0038151"}


id: MOD:00154
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to O4'-(8alpha-FAD)-L-tyrosine.","definition_xrefs":["Unimod:50#Y","DeltaMass:0","PubMed:7391034","RESID:AA0145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD modified residue","termid":"MOD:00895"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-(8alpha-FAD)-L-tyrosine","synonyms":[{"name":"(2S)-2-amino-3-(4-[8alpha-riboflavin 5'-(trihydrogen diphosphate) 5'->5'-ester with adenosine]oxyphenyl)propanoic acid","type":"exact"},{"name":"8alpha-(O4'-tyrosyl)FAD","type":"exact"},{"name":"FAD","type":"related"},{"name":"Flavin adenine dinucleotide","type":"related"},{"name":"MOD_RES O-8alpha-FAD tyrosine","type":"exact"},{"name":"O-8 alpha-Flavin [FAD])- (of Tyrosine)","type":"exact"},{"name":"O4'-(8alpha-FAD)-L-tyrosine","type":"exact"},{"name":"O8aFADTyr","type":"exact"}],"termid":"MOD:00154"}


id: _global:causally_downstream_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of upstream of","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_downstream_of_or_within","termid":"_global:causally_downstream_of_or_within"},{"relation_name":"is_a","term_name":"preceded_by","termid":"_global:preceded_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_downstream_of","secondary_identifiers":["RO:0002404"],"termid":"_global:causally_downstream_of"}


id: GO:0071163
data:
  {"annotated_genes":["SJAG_02908","SJAG_02607","SJAG_00327","SJAG_04879","SJAG_04995","SJAG_02667","SJAG_01823"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115559,117405,109305,111916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140529"},{"annotations":[80051,57361,73746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902977"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the DNA replication preinitiation complex, a protein-DNA complex that is assembled at DNA replication origins as part of initiation of DNA replication. The complex consists of proteins that initiate the DNA binding, melt the helix and enable helicase activity.","definition_xrefs":["PMID:28209641","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"},{"relation_name":"part_of","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00327":null,"SJAG_01823":null,"SJAG_02607":null,"SJAG_02667":null,"SJAG_02908":null,"SJAG_04879":null,"SJAG_04995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006260","GO:0044085","GO:0007049","GO:0008150","GO:0065003","GO:0006259"],"is_obsolete":false,"name":"DNA replication preinitiation complex assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1902293","GO:1902316"],"synonyms":[{"name":"DNA replication preinitiation complex formation","type":"exact"},{"name":"pre-IC complex assembly","type":"exact"}],"termid":"GO:0071163","terms_by_termid":{"GO:0140529":null,"GO:1902977":null}}


id: PBO:0077112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 21","termid":"PBO:0077112"}


id: MONDO:0030684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadotropic hypogonadism","termid":"MONDO:0018555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 27 without anosmia","secondary_identifiers":["MEDGEN:1810165","OMIM:619755","UMLS:C5676921"],"synonyms":[{"name":"HH27","type":"exact"},{"name":"hypogonadotropic hypogonadism 27 without anosmia","type":"exact"}],"termid":"MONDO:0030684","xrefs":{"Monarch":{"xref_id":"0030684"}}}


id: GO:2000425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptotic cell clearance.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phagocytosis","termid":"GO:0050764"},{"relation_name":"regulates","term_name":"apoptotic cell clearance","termid":"GO:0043277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of apoptotic cell clearance","synonyms":[{"name":"regulation of apoptotic cell removal","type":"exact"},{"name":"regulation of efferocytosis","type":"exact"},{"name":"regulation of programmed cell clearance","type":"exact"}],"termid":"GO:2000425"}


id: PBO:0074450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"survival of motor neuron 2, centromeric","termid":"PBO:0074450"}


id: MONDO:0000995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of genetic neurological disorders caused by mutations in genes involved in the sodium and calcium channels in nerve cells. It is characterized by episodes of muscle paralysis in which the affected muscles become flaccid and the deep tendon reflexes disappear. Between the episodes the affected muscles usually work normally.","definition_xrefs":["NCIT:C84709"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"muscle tissue disorder","termid":"MONDO:0003939"},{"relation_name":"is_a","term_name":"inborn metal metabolism disorder","termid":"MONDO:0004689"},{"relation_name":"is_a","term_name":"periodic paralysis","termid":"MONDO:0016122"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"familial periodic paralysis","secondary_identifiers":["DOID:1029","NANDO:1200502","Orphanet:371433","MESH:D010245","UMLS:C0030443","GARD:21613","MEDGEN:18291","SCTID:267607008"],"synonyms":[{"name":"familial periodic paralyses","type":"related"},{"name":"familial periodic paralysis","type":"exact"},{"name":"familial periodic paralyzes","type":"related"},{"name":"genetic periodic paralysis","type":"related"},{"name":"hereditary periodic paralysis (disease)","type":"exact"},{"name":"normokalemic periodic paralyses","type":"related"},{"name":"normokalemic periodic paralysis","type":"related"},{"name":"normokalemic periodic paralyzes","type":"related"},{"name":"paralysis, familial periodic","type":"related"},{"name":"paralysis, normokalemic periodic","type":"related"},{"name":"paralyzes, normokalemic periodic","type":"related"},{"name":"periodic paralysis, familial","type":"related"},{"name":"periodic paralysis, normokalemic","type":"related"},{"name":"periodic paralyzes, familial","type":"related"},{"name":"periodic paralyzes, normokalemic","type":"related"}],"termid":"MONDO:0000995","xrefs":{"Monarch":{"xref_id":"0000995"}}}


id: GO:0014900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A muscle system process that results in an increase in cell number by cell division, often leading to an increase in the size of an organ.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle adaptation","termid":"GO:0043500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle hyperplasia","termid":"GO:0014900"}


id: MONDO:0008803
data:
  {"annotated_genes":["SJAG_04270"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008726"},{"annotations":[86908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020667"}]},"cv_name":"mondo","definition":"Antley-Bixler syndrome is a very rare disorder characterized by craniosynostosis with midface hypoplasia, radiohumeral synostosis, femoral bowing and joint contractures.","definition_xrefs":["Orphanet:83"],"direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis syndrome, autosomal recessive","termid":"MONDO:0011679"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005497"],"is_obsolete":false,"name":"Antley-Bixler syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1714404","DOID:0050462","GARD:5826","NANDO:2200975","NORD:792","SCTID:62964007","icd11.foundation:2027710139","UMLS:C5234850","DOID:0081289","NANDO:1200669"],"synonyms":[{"name":"Antley Bixler syndrome","type":"related"},{"name":"multisynostotic osteodysgenesis with long bone fractures","type":"related"},{"name":"osteodysgenesis, multisynostotic with fractures","type":"related"},{"name":"osteodysgenesis, multisynostotic, with fractures","type":"related"},{"name":"trapezoidocephaly synostosis syndrome","type":"related"},{"name":"trapezoidocephaly-synostosis syndrome","type":"exact"}],"termid":"MONDO:0008803","terms_by_termid":{"MONDO:0008726":null,"MONDO:0020667":null},"xrefs":{"Monarch":{"xref_id":"0008803"}}}


id: GO:0050003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + dCMP = 2'-deoxy-5-methyl-5'-cytidylate + 7,8-dihydrofolate.","definition_xrefs":["RHEA:11568","EC:2.1.1.54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-methyltransferase activity","termid":"GO:0008169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"deoxycytidylate C-methyltransferase activity","secondary_identifiers":["MetaCyc:DEOXYCYTIDYLATE-C-METHYLTRANSFERASE-RXN","KEGG_REACTION:R01670"],"synonyms":[{"name":"5,10-methylenetetrahydrofolate:dCMP C-methyltransferase activity","type":"related"},{"name":"dCMP methyltransferase activity","type":"related"},{"name":"deoxycytidylate methyltransferase activity","type":"related"}],"termid":"GO:0050003"}


id: MOD:01420
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by condensation of a cysteine thiol with the carbonyl of the preceding residue to form a thiazole or thiazoline ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"},{"relation_name":"is_a","term_name":"oxazole/thiazole ring crosslinked residues","termid":"MOD:00690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"}


id: MONDO:0958184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolytic ichthyosis","termid":"MONDO:0007239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolytic hyperkeratosis 2","secondary_identifiers":["DOID:0081359"],"termid":"MONDO:0958184","xrefs":{"Monarch":{"xref_id":"0958184"}}}


id: PBO:0052295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain containing 4, pre-mRNA splicing factor","termid":"PBO:0052295"}


id: MONDO:0003758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor that arises from the testis during childhood.","definition_xrefs":["NCIT:C6552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular germ cell tumor","termid":"MONDO:0010108"},{"relation_name":"is_a","term_name":"childhood gonadal germ cell tumor","termid":"MONDO:0020577"},{"relation_name":"is_a","term_name":"childhood testicular neoplasm","termid":"MONDO:0037250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood testicular germ cell tumor","secondary_identifiers":["MEDGEN:208758","DOID:6082","UMLS:C0796663"],"synonyms":[{"name":"childhood testicular germ cell neoplasm","type":"exact"},{"name":"childhood testicular germ cell tumor","type":"exact"},{"name":"paediatric testicular germ cell neoplasm","type":"exact"},{"name":"paediatric testicular germ cell tumour","type":"exact"},{"name":"pediatric testicular germ cell neoplasm","type":"exact"},{"name":"pediatric testicular germ cell tumor","type":"exact"},{"name":"testicular germ cell tumor","type":"broad"},{"name":"testicular germ cell tumor of childhood","type":"exact"},{"name":"testicular germ cell tumour","type":"broad"},{"name":"testicular germ cell tumour of childhood","type":"exact"}],"termid":"MONDO:0003758","xrefs":{"Monarch":{"xref_id":"0003758"}}}


id: PR:Q9USH8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glucosidase 2 subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04545","PANTHER:PTHR12630:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase 2 subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC825.02","secondary_identifiers":["UniProtKB:Q9USH8"],"synonyms":[{"name":"Spom972h-PRKCSH","type":"exact"},{"name":"alpha-glucosidase 2 subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USH8"}


id: PR:G2TRQ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRQ0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein tam13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.15","synonyms":[{"name":"Spom972h-tam13","type":"exact"},{"name":"transcripts altered in meiosis protein 13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRQ0"}


id: MONDO:0008026
data:
  {"annotated_genes":["SJAG_02286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87673],"is_not":false,"summary":null,"term":"MONDO:0008026"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant childhood-onset proximal spinal muscular atrophy","termid":"MONDO:0018190"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005244"],"is_obsolete":false,"name":"autosomal dominant childhood-onset proximal spinal muscular atrophy without contractures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C563560","Orphanet:209341","DOID:0070351","GARD:13519","MEDGEN:1830501","UMLS:C5780022","OMIM:158600"],"synonyms":[{"name":"Kugelberg-Welander syndrome, autosomal dominant","type":"related"},{"name":"Lower extremity-predominant autosomal dominant proximal spinal muscular atrophy without contractures","type":"exact"},{"name":"SMALED1","type":"exact"},{"name":"Sma-led","type":"related"},{"name":"spinal muscular atrophy, LOWER extremity-predominant, 1, autosomal dominant","type":"related"},{"name":"spinal muscular atrophy, childhood, proximal, autosomal dominant","type":"related"},{"name":"spinal muscular atrophy, juvenile, proximal, autosomal dominant","type":"related"},{"name":"spinal muscular atrophy, lower extremity-predominant 1, AD","type":"exact"}],"termid":"MONDO:0008026","terms_by_termid":{"MONDO:0008026":null},"xrefs":{"Monarch":{"xref_id":"0008026"}}}


id: GO:0036020
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an endolysosome. An endolysosome is a transient hybrid organelle formed by fusion of a late endosome with a lysosome.","definition_xrefs":["GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal membrane","termid":"GO:0005765"},{"relation_name":"is_a","term_name":"endosome membrane","termid":"GO:0010008"},{"relation_name":"part_of","term_name":"endolysosome","termid":"GO:0036019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005773","GO:0005575","GO:0005768","GO:0005737"],"is_obsolete":false,"name":"endolysosome membrane","synonyms":[{"name":"endolysosomal membrane","type":"exact"}],"termid":"GO:0036020"}


id: PBO:0053480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 454","termid":"PBO:0053480"}


id: GO:0002848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of T cell tolerance induction to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell mediated immune response to tumor cell","termid":"GO:0002842"},{"relation_name":"is_a","term_name":"positive regulation of tolerance induction to tumor cell","termid":"GO:0002845"},{"relation_name":"is_a","term_name":"regulation of T cell tolerance induction to tumor cell","termid":"GO:0002846"},{"relation_name":"is_a","term_name":"positive regulation of peripheral T cell tolerance induction","termid":"GO:0002851"},{"relation_name":"positively_regulates","term_name":"T cell tolerance induction to tumor cell","termid":"GO:0002411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell tolerance induction to tumor cell","synonyms":[{"name":"activation of T cell tolerance induction to tumor cell","type":"narrow"},{"name":"stimulation of T cell tolerance induction to tumor cell","type":"narrow"},{"name":"up regulation of T cell tolerance induction to tumor cell","type":"exact"},{"name":"up-regulation of T cell tolerance induction to tumor cell","type":"exact"},{"name":"upregulation of T cell tolerance induction to tumor cell","type":"exact"}],"termid":"GO:0002848"}


id: PBO:0033771
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_site-specific_DNA_replication_termination_at_RTS1_barrier","termid":"PBO:0033771"}


id: PBO:0002983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine acetyltransferase (predicted)","termid":"PBO:0002983"}


id: PBO:0043509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP3 pseudogene 4","termid":"PBO:0043509"}


id: PR:Q9UT84
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC343.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT84"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid scramblase family protein C343.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.06c","synonyms":[{"name":"Spom972h-SPAC343.06c","type":"exact"}],"termid":"PR:Q9UT84"}


id: PBO:0073069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan binding protein 2","termid":"PBO:0073069"}


id: PBO:0063336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferating cell nuclear antigen pseudogene 1","termid":"PBO:0063336"}


id: PBO:0028899
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_kinetochore_during_vegetative_growth","termid":"PBO:0028899"}


id: PBO:0027884
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4-K20_methylation","termid":"PBO:0027884"}


id: GO:0032697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-14 production.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of interleukin-14 production (obsolete GO:0032697)","synonyms":[{"name":"down regulation of interleukin-14 production","type":"exact"},{"name":"down-regulation of interleukin-14 production","type":"exact"},{"name":"downregulation of interleukin-14 production","type":"exact"},{"name":"inhibition of interleukin-14 production","type":"narrow"},{"name":"negative regulation of IL-14 production","type":"exact"},{"name":"negative regulation of interleukin-14 biosynthetic process","type":"narrow"}],"termid":"GO:0032697"}


id: MONDO:0700336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cancer in which a carcinoma, usually of the digestive tract or female reproductive organs, has spread extensively throughout the peritoneum and causes tumors to grow on the peritoneum. Peritoneal carcinomatosis can happen in many types of cancer, but it is most common in people with cancers of the ovary, colon, rectum, stomach, pancreas, or appendix.","definition_xrefs":["NCIT:C27382","PMID:24222942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peritoneum cancer","termid":"MONDO:0002087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"peritoneal carcinomatosis","secondary_identifiers":["MEDGEN:577752","UMLS:C0346990"],"synonyms":[{"name":"abdominal carcinomatosis","type":"exact"},{"name":"carcinomatosis of the peritoneum","type":"exact"},{"name":"peritoneal carcinomatosis","type":"exact"}],"termid":"MONDO:0700336","xrefs":{"Monarch":{"xref_id":"0700336"}}}


id: PBO:0035989
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cAMP","termid":"PBO:0035989"}


id: PBO:0004343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-Q","termid":"PBO:0004343"}


id: GO:0006424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling glutamate to glutamyl-tRNA, catalyzed by glutamyl-tRNA synthetase. The glutamyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a glutamic acid-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.","definition_xrefs":["GOC:mcc","ISBN:0716730510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006520","GO:0006399"],"is_obsolete":false,"name":"glutamyl-tRNA aminoacylation","termid":"GO:0006424"}


id: GO:1902088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any plant-type cell wall loosening that is involved in abscission.","definition_xrefs":["GOC:TermGenie","PMID:23479623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall loosening","termid":"GO:0009828"},{"relation_name":"is_a","term_name":"cell wall modification involved in abscission","termid":"GO:0009830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"plant-type cell wall loosening involved in abscission","synonyms":[{"name":"cellulose and pectin-containing cell wall loosening involved in abscission","type":"exact"}],"termid":"GO:1902088"}


id: PR:Q09769
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Lon protease, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10046:SF23","PRO:DNx","OMA:SCHPO00272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lon protease homolog, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.06c","secondary_identifiers":["UniProtKB:Q09769"],"synonyms":[{"name":"Spom972h-LONP1","type":"exact"}],"termid":"PR:Q09769"}


id: FYPO:0007364
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyruvate kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal pyruvate kinase activity","termid":"FYPO:0007363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000654","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"increased pyruvate kinase activity","termid":"FYPO:0007364"}


id: PBO:0064623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrophosphatase (inorganic) 1 pseudogene","termid":"PBO:0064623"}


id: MONDO:0006196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A high grade, aggressive adenocarcinoma arising from the endometrium. It is characterized by the presence of complex papillary patterns with cellular budding. Atypical mitoses, necrosis, and psammoma bodies may be present. It is classified as type II endometrial carcinoma and it is not associated with endometrial hyperplasia. It tends to invade deeply into the myometrium and spreads into the lymphatic vessels. Patients frequently present with spread of the tumor beyond the uterus at the time of diagnosis. The prognosis is usually poor.","definition_xrefs":["NCIT:C27838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine carcinoma","termid":"MONDO:0005213"},{"relation_name":"is_a","term_name":"serous adenocarcinoma","termid":"MONDO:0005278"},{"relation_name":"is_a","term_name":"uterine corpus cancer","termid":"MONDO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"endometrial serous adenocarcinoma","secondary_identifiers":["MEDGEN:1659908","DOID:5750","UMLS:C0854924","EFO:1000238","ONCOTREE:USC","icd11.foundation:225222541"],"synonyms":[{"name":"body of uterus serous adenocarcinoma","type":"exact"},{"name":"endometrial serous adenocarcinoma","type":"exact"},{"name":"serous endometrial adenocarcinoma","type":"exact"},{"name":"uterine corpus serous adenocarcinoma","type":"exact"},{"name":"uterine papillary serous carcinoma","type":"exact"},{"name":"uterine serous adenocarcinoma","type":"broad"},{"name":"uterine serous carcinoma","type":"broad"},{"name":"uterine serous carcinoma/uterine papillary serous carcinoma","type":"related"},{"name":"uterine serous papillary adenocarcinoma","type":"exact"}],"termid":"MONDO:0006196","xrefs":{"Monarch":{"xref_id":"0006196"}}}


id: GO:2001281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle cell chemotaxis toward tendon cell.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"regulates","term_name":"muscle cell chemotaxis toward tendon cell","termid":"GO:0036061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle cell chemotaxis toward tendon cell","synonyms":[{"name":"regulation of muscle cell attraction","type":"related"},{"name":"regulation of muscle cell chemotaxis towards tendon cell","type":"exact"}],"termid":"GO:2001281"}


id: PBO:0064733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 69","termid":"PBO:0064733"}


id: PBO:0055462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2895","termid":"PBO:0055462"}


id: GO:1901776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mitomycin C.","definition_xrefs":["PMID:10094699","GOC:TermGenie","GOC:yaf","PMID:10099135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"mitomycin C metabolic process","termid":"GO:1901775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"mitomycin C catabolic process","synonyms":[{"name":"mitomycin C breakdown","type":"exact"},{"name":"mitomycin C catabolism","type":"exact"},{"name":"mitomycin C degradation","type":"exact"}],"termid":"GO:1901776"}


id: MONDO:0007320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chondrocalcinosis","termid":"MONDO:0001314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"chondrocalcinosis due to apatite crystal deposition","secondary_identifiers":["MESH:C535939","OMIM:118610","MEDGEN:349317","UMLS:C1861580"],"synonyms":[{"name":"chondrocalcinosis due to apatite crystal deposition","type":"exact"},{"name":"familial apatite disease","type":"related"}],"termid":"MONDO:0007320","xrefs":{"Monarch":{"xref_id":"0007320"}}}


id: PBO:0059113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motile sperm domain containing 2","termid":"PBO:0059113"}


id: PBO:0029601
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transporter_activity","termid":"PBO:0029601"}


id: FYPO:0001889
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is too low to detect. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"},{"relation_name":"is_a","term_name":"substance absent from cell","termid":"FYPO:0001888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"RNA absent from cell","synonyms":[{"name":"transcripts absent from cell","type":"exact"},{"name":"undetectable cellular RNA level","type":"exact"}],"termid":"FYPO:0001889"}


id: GO:1990213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of salicylic acid levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:20565685","PMID:17722699","GOC:ml"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of salicylic acid levels in host (obsolete GO:1990213)","termid":"GO:1990213"}


id: PBO:0004351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein","termid":"PBO:0004351"}


id: GO:0050016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: kynurenate + donor-H2 + O2 = 7,8-dihydro-7,8-dihydroxykynurenate + acceptor.","definition_xrefs":["EC:1.14.99.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"kynurenine 7,8-hydroxylase activity","secondary_identifiers":["RHEA:11968","MetaCyc:KYNURENINE-78-HYDROXYLASE-RXN"],"synonyms":[{"name":"kynurenate 7,8-hydroxylase activity","type":"related"},{"name":"kynurenate,hydrogen-donor:oxygen oxidoreductase (hydroxylating)","type":"related"},{"name":"kynurenic acid hydroxylase activity","type":"related"},{"name":"kynurenic hydroxylase activity","type":"related"}],"termid":"GO:0050016"}


id: PR:P53694
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rtn1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P53694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31A8.01c","synonyms":[{"name":"Spom972h-rtn1","type":"exact"},{"name":"cell lysis protein cwl1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P53694"}


id: GO:2001129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a methane from a dimethylamine.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"},{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"methane biosynthetic process from dimethylamine","termid":"GO:2001129"}


id: PBO:0029606
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transporter_activity_phenotype","termid":"PBO:0029606"}


id: PBO:0017838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome regulatory particle, lid subcomplex subunit Rpn15/Dss1","termid":"PBO:0017838"}


id: GO:0018077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of one or more iodine atoms to an amino acid residue in a protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein iodination (obsolete GO:0018077)","synonyms":[{"name":"protein amino acid iodination","type":"exact"}],"termid":"GO:0018077"}


id: SO:0000798
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"TE that has been modified by manipulations in vitro.","definition_xrefs":["FB:mc"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"transposable_element","termid":"SO:0000101"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_transposable_element","synonyms":[{"name":"engineered transposable element","type":"exact"}],"termid":"SO:0000798"}


id: PBO:0042416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27","termid":"PBO:0042416"}


id: GO:0034779
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-isopropenyl-2-ketocyclohexane-1-carboxyl-CoA + H2O = 3-isopropenylpimelyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-isopropenyl-2-ketocyclohexane-1-carboxyl-CoA hydrolase activity (obsolete GO:0034779)","termid":"GO:0034779"}


id: PBO:0018054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Slh1, human ASCC3 ortholog (predicted)","termid":"PBO:0018054"}


id: GO:0075252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of uredospore formation, a process in which an asexual, dikaryotic, often rusty-colored spore, is formed in a structure called a uredinium.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043943"},{"relation_name":"regulates","term_name":"uredospore formation","termid":"GO:0075251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of uredospore formation","synonyms":[{"name":"regulation of ureidospore formation","type":"exact"}],"termid":"GO:0075252"}


id: PR:O94461
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1687.21 gene.","definition_xrefs":["UniProtKB:O94461","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase C1687.21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.21","synonyms":[{"name":"Spom972h-SPAC1687.21","type":"exact"}],"termid":"PR:O94461"}


id: PBO:0088251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAD superfamily hydrolase, unknown role","termid":"PBO:0088251"}


id: PBO:0049853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT domain E3 ubiquitin protein ligase 2","termid":"PBO:0049853"}


id: PBO:0027805
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_JM216","termid":"PBO:0027805"}


id: MONDO:0012755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Episodic ataxia type 7 (EA7) is an exceedingly rare form of Hereditary episodic ataxia characterized by ataxia with weakness, vertigo, and dysarthria without interictal findings.","definition_xrefs":["Orphanet:209970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary episodic ataxia","termid":"MONDO:0016227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"episodic ataxia type 7","secondary_identifiers":["MESH:C567459","OMIM:611907","UMLS:C2677843","MEDGEN:383209","GARD:17108","icd11.foundation:1855038011","SCTID:718752007","DOID:0050995"],"synonyms":[{"name":"EA7","type":"related"},{"name":"episodic ataxia, type 7","type":"related"}],"termid":"MONDO:0012755","xrefs":{"Monarch":{"xref_id":"0012755"}}}


id: GO:0045857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any heritable epigenetic process that stops, prevents, or reduces the frequency, rate or extent of protein function by self-perpetuating conformational conversions of normal proteins in healthy cells. This is distinct from, though mechanistically analogous to, disease states associated with prion propagation and amyloidogenesis. A single protein, if it carries a glutamine/asparagine-rich ('prion') domain, can sometimes stably exist in at least two distinct physical states, each associated with a different phenotype; propagation of one of these traits is achieved by a self-perpetuating change in the protein from one form to the other, mediated by conformational changes in the glutamine/asparagine-rich domain. Prion domains are both modular and transferable to other proteins, on which they can confer a heritable epigenetic alteration of function; existing bioinformatics data indicate that they are rare in non-eukarya, but common in eukarya.","definition_xrefs":["GOC:go_curators","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of molecular function, epigenetic (obsolete GO:0045857)","synonyms":[{"name":"down regulation of protein activity, epigenetic","type":"exact"},{"name":"down-regulation of protein activity, epigenetic","type":"exact"},{"name":"downregulation of protein activity, epigenetic","type":"exact"},{"name":"inhibition of protein activity, epigenetic","type":"narrow"},{"name":"negative regulation of protein activity, epigenetic","type":"exact"}],"termid":"GO:0045857"}


id: GO:0001699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of gastric acid by parietal cells in response to acetylcholine.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric acid secretion","termid":"GO:0001696"},{"relation_name":"part_of","term_name":"cellular response to acetylcholine","termid":"GO:1905145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"acetylcholine-induced gastric acid secretion","termid":"GO:0001699"}


id: PBO:0072919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scavenger receptor class F member 2","termid":"PBO:0072919"}


id: GO:1901084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of pyrrolizidine alkaloid.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrrolizidine alkaloid catabolic process (obsolete GO:1901084)","synonyms":[{"name":"pyrrolizidine alkaloid breakdown","type":"exact"},{"name":"pyrrolizidine alkaloid catabolism","type":"exact"},{"name":"pyrrolizidine alkaloid degradation","type":"exact"}],"termid":"GO:1901084"}


id: GO:0010648
data:
  {"annotated_genes":["SJAG_01790","SJAG_02426","SJAG_04943","SJAG_02231","SJAG_00457","SJAG_03355","SJAG_03353","SJAG_02311","SJAG_03681","SJAG_00293","SJAG_03089","SJAG_02379","SJAG_02013","SJAG_03185","SJAG_04825","SJAG_04551","SJAG_03893","SJAG_01245","SJAG_00424","SJAG_04455","SJAG_00610","SJAG_01297","SJAG_00883","SJAG_03126","SJAG_02233","SJAG_02765","SJAG_02000","SJAG_01386","SJAG_00209","SJAG_00229","SJAG_03508","SJAG_03592","SJAG_05346","SJAG_02336","SJAG_00975","SJAG_02451","SJAG_05000","SJAG_03678","SJAG_00991","SJAG_04522","SJAG_00875","SJAG_02514","SJAG_02169","SJAG_01114","SJAG_01142","SJAG_04910","SJAG_03974","SJAG_02389","SJAG_06270","SJAG_00169","SJAG_01253","SJAG_04249","SJAG_02481","SJAG_00990","SJAG_00526","SJAG_01983","SJAG_03799","SJAG_03486","SJAG_03072","SJAG_04206","SJAG_00266","SJAG_01184","SJAG_03501","SJAG_04462","SJAG_04259","SJAG_02392","SJAG_00289","SJAG_01679","SJAG_00824","SJAG_00642","SJAG_03263","SJAG_01464","SJAG_02858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110218,117903,105826,115777,92595,109188,116269,101506,113946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[94632,109931,102362,93971,118385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"},{"annotations":[118131,102921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106057"},{"annotations":[97752,109001,109569,120346,101355,105734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[91306,104074,104777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902660"},{"annotations":[96084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[119090,97874,93548,96934,120347,101357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[90067,109094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"},{"annotations":[95204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090029"},{"annotations":[74086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"},{"annotations":[73301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035024"},{"annotations":[93616,112145,95339,92599,109189,97539,106991,101508,103201,94810,94725,109056,109499,117906,74667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[113698,93118,107848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000639"},{"annotations":[74930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032007"},{"annotations":[95210,115973,101490,120057,75416,120250,115150,81709,111242,116576,100791,118489,104946,109106,111649,118132,98002,107081,75309,119053,89879,62862,103385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904262"},{"annotations":[118278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903940"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of cell communication. Cell communication is the process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"cell communication","termid":"GO:0007154"}],"gene_count":73,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00229":null,"SJAG_00266":null,"SJAG_00289":null,"SJAG_00293":null,"SJAG_00424":null,"SJAG_00457":null,"SJAG_00526":null,"SJAG_00610":null,"SJAG_00642":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00883":null,"SJAG_00975":null,"SJAG_00990":null,"SJAG_00991":null,"SJAG_01114":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01245":null,"SJAG_01253":null,"SJAG_01297":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01679":null,"SJAG_01790":null,"SJAG_01983":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02169":null,"SJAG_02231":null,"SJAG_02233":null,"SJAG_02311":null,"SJAG_02336":null,"SJAG_02379":null,"SJAG_02389":null,"SJAG_02392":null,"SJAG_02426":null,"SJAG_02451":null,"SJAG_02481":null,"SJAG_02514":null,"SJAG_02765":null,"SJAG_02858":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03126":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03353":null,"SJAG_03355":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03678":null,"SJAG_03681":null,"SJAG_03799":null,"SJAG_03893":null,"SJAG_03974":null,"SJAG_04206":null,"SJAG_04249":null,"SJAG_04259":null,"SJAG_04455":null,"SJAG_04462":null,"SJAG_04522":null,"SJAG_04551":null,"SJAG_04825":null,"SJAG_04910":null,"SJAG_04943":null,"SJAG_05000":null,"SJAG_05346":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell communication","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0010648","terms_by_termid":{"GO:0031030":null,"GO:0032007":null,"GO:0035024":null,"GO:0046580":null,"GO:0090029":null,"GO:0106057":null,"GO:0110034":null,"GO:0140499":null,"GO:0180040":null,"GO:1902426":null,"GO:1902660":null,"GO:1903138":null,"GO:1903753":null,"GO:1903940":null,"GO:1904262":null,"GO:2000639":null}}


id: PBO:0048226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest and DNA damage inducible gamma","termid":"PBO:0048226"}


id: PBO:0089828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC1 DNA repair endonuclease non-catalytic subunit Swi10","termid":"PBO:0089828"}


id: GO:0048874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process involved in maintaining the steady-state number of cells within a population of free-living cells such as the bacteria in the gut.","definition_xrefs":["PMID:25757720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"},{"relation_name":"is_a","term_name":"host-mediated perturbation of symbiont process","termid":"GO:0051851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host-mediated regulation of intestinal microbiota composition","synonyms":[{"name":"homeostasis of number of cells in a free-living population","type":"related"},{"name":"host-induced regulation of intestinal microbiota composition","type":"related"}],"termid":"GO:0048874"}


id: FYPO:0000152
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype in which the response to nitrogen starvation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to starvation","termid":"FYPO:0000713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000298","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cellular response to nitrogen starvation","synonyms":[{"name":"abnormal cellular response to nitrogen depletion","type":"exact"},{"name":"abnormal cellular response to nitrogen deprivation","type":"exact"}],"termid":"FYPO:0000152"}


id: PBO:0080852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YdjC chitooligosaccharide deacetylase homolog","termid":"PBO:0080852"}


id: MONDO:0017779
data:
  {"annotated_genes":["SJAG_02949"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012221"},{"annotations":[86999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012222"}]},"cv_name":"mondo","definition":"Alpha-N-acetylgalactosaminidase (NAGA) deficiency is a very rare lysosomal storage disease that is clinically and pathologically heterogeneous and is characterized by deficient NAGA activity.","definition_xrefs":["Orphanet:3137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharidosis","termid":"MONDO:0019251"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02949":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"alpha-N-acetylgalactosaminidase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1693","MEDGEN:1845666","NANDO:1200134","UMLS:C5848084","icd11.foundation:1647881428","DOID:0112317","ICD9:277.89","GARD:16621","SCTID:238048001"],"synonyms":[{"name":"NAGA deficiency","type":"exact"},{"name":"Schindler disease","type":"exact"},{"name":"alpha-N-acetylgalactosaminidase activity disease","type":"exact"},{"name":"disorder of alpha-N-acetylgalactosaminidase activity","type":"exact"}],"termid":"MONDO:0017779","terms_by_termid":{"MONDO:0012221":null,"MONDO:0012222":null},"xrefs":{"Monarch":{"xref_id":"0017779"}}}


id: PBO:0080960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 3","termid":"PBO:0080960"}


id: GO:0000424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Degradation of a mitochondrion by microautophagy.","definition_xrefs":["PMID:15798367","PMID:27003723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagy of mitochondrion","termid":"GO:0000422"},{"relation_name":"is_a","term_name":"microautophagy","termid":"GO:0016237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"micromitophagy","termid":"GO:0000424"}


id: PBO:0005692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha-associated DNA helicase A (predicted)","termid":"PBO:0005692"}


id: MONDO:0010738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spondylometaphyseal dysplasia, Golden type is a rare primary bone dysplasia disorder characterized by severe short stature, coarse facies, thoracolumbar kyphoscoliosis and enlarged joints with contractures. Psychomotor delay and intellectual disability may also be associated. Radiographic features include flat vertebral bodies, lacy ossification of the metaphyses of long bones and iliac crests, and marked sclerosis of the skull base.","definition_xrefs":["Orphanet:168544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondylometaphyseal dysplasia","termid":"MONDO:0016763"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylometaphyseal dysplasia, Golden type","secondary_identifiers":["GARD:8343","UMLS:C0796172","MEDGEN:208672","OMIM:313420","icd11.foundation:840695879","MESH:C563124"],"synonyms":[{"name":"X-linked spondylometaphyseal dysplasia","type":"exact"},{"name":"spondylometaphyseal dysplasia Richmond type","type":"related"},{"name":"spondylometaphyseal dysplasia X-linked","type":"related"},{"name":"spondylometaphyseal dysplasia, Richmond type","type":"related"},{"name":"spondylometaphyseal dysplasia, X-linked","type":"related"}],"termid":"MONDO:0010738","xrefs":{"Monarch":{"xref_id":"0010738"}}}


id: GO:0090199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of release of cytochrome c from mitochondria, the process in which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrion organization","termid":"GO:0010821"},{"relation_name":"regulates","term_name":"release of cytochrome c from mitochondria","termid":"GO:0001836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007005","GO:0008150"],"is_obsolete":false,"name":"regulation of release of cytochrome c from mitochondria","termid":"GO:0090199"}


id: GO:0018783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: deisopropyldeethylatrazine + H2O = 2-chloro-4-hydroxy-6-amino-1,3,5-triazine + NH3.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete deisopropyldeethylatrazine hydrolase activity (obsolete GO:0018783)","termid":"GO:0018783"}


id: GO:1990092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The calcium-dependent hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their own peptide bonds.","definition_xrefs":["PMID:20460380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"self proteolysis","termid":"GO:0097264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"calcium-dependent self proteolysis","termid":"GO:1990092"}


id: PBO:0039789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-Raf proto-oncogene, serine/threonine kinase","termid":"PBO:0039789"}


id: GO:0001642
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled receptor that is activated by L-AP-4 and inhibits adenylate cyclase activity.","definition_xrefs":["PMID:9016303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase inhibiting G protein-coupled glutamate receptor activity","termid":"GO:0001640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"group III metabotropic glutamate receptor activity","termid":"GO:0001642"}


id: PBO:0059273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L35 pseudogene 2","termid":"PBO:0059273"}


id: PBO:0113296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proteasome-binding protein; interacts physically with multiple subunits of the 20S proteasome and genetically with genes encoding 20S core particle and 19S regulatory particle subunits; specifically blocks all three proteasome active sites; exhibits boundary activity which inhibits the propagation of heterochromatic silencing; contains a PI31 proteasome regulator domain and sequence similarity with human PSMF1, a proteasome inhibitor; not an essential gene","termid":"PBO:0113296"}


id: PBO:0110316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEF for Sar1, WD repeat protein Spo14","termid":"PBO:0110316"}


id: GO:0036371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, the T-tubule. The T-tubule is an invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril.","definition_xrefs":["PMID:16292983","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to plasma membrane","termid":"GO:0072659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to T-tubule","synonyms":[{"name":"protein localisation to T-tubule","type":"exact"},{"name":"protein localization to T tubule","type":"exact"},{"name":"protein localization to transverse tubule","type":"exact"}],"termid":"GO:0036371"}


id: GO:0047539
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a 2-deoxy-alpha-D-glucoside = 2-deoxy-D-glucose + an alcohol.","definition_xrefs":["EC:3.2.1.112","MetaCyc:2-DEOXYGLUCOSIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosidase activity","termid":"GO:0015926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"2-deoxyglucosidase activity","secondary_identifiers":["RHEA:15317"],"synonyms":[{"name":"2-deoxy-alpha-D-glucosidase activity","type":"related"},{"name":"2-deoxy-alpha-D-glucoside deoxyglucohydrolase activity","type":"related"},{"name":"2-deoxy-alpha-glucosidase activity","type":"related"}],"termid":"GO:0047539"}


id: PBO:0039518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 33B","termid":"PBO:0039518"}


id: PBO:0111298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Prp40","termid":"PBO:0111298"}


id: PBO:0053701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 903","termid":"PBO:0053701"}


id: PBO:0051345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-28","termid":"PBO:0051345"}


id: PBO:0046357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 15","termid":"PBO:0046357"}


id: PBO:0091333
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by N. crassa Pzl1","termid":"PBO:0091333"}


id: PR:O94664
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug166 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 166 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.06","synonyms":[{"name":"Spom972h-mug166","type":"exact"}],"termid":"PR:O94664"}


id: GO:0098901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a cardiac muscle cell. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:dos","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"},{"relation_name":"regulates","term_name":"cardiac muscle cell action potential","termid":"GO:0086001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle cell action potential","termid":"GO:0098901"}


id: MONDO:0019809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dysfunction of the aortic valve characterized by incomplete valve closure that is present at birth.","definition_xrefs":["NCIT:C103936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic valve insufficiency","termid":"MONDO:0005648"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital aortic valve insufficiency","secondary_identifiers":["ICD9:746.4","SCTID:28656008","UMLS:C0158617","Orphanet:95449","MEDGEN:510599","MedDRA:10010370"],"synonyms":[{"name":"Congential aortic valve insufficiency","type":"exact"},{"name":"congenital aortic insufficiency","type":"exact"},{"name":"congenital insufficiency of aortic valve","type":"exact"}],"termid":"MONDO:0019809","xrefs":{"Monarch":{"xref_id":"0019809"}}}


id: PBO:0026685
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_at_high_temperature","termid":"PBO:0026685"}


id: GO:0005480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicle transport (obsolete GO:0005480)","synonyms":[{"name":"vesicle transport","type":"exact"}],"termid":"GO:0005480"}


id: PBO:0003036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine racemase Alr2 (predicted)","termid":"PBO:0003036"}


id: PATO:0000096
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000096 relative drug sensitivity (obsolete PATO:0000096)","termid":"PATO:0000096"}


id: PBO:0110979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD44 molecule (IN blood group)","termid":"PBO:0110979"}


id: FYPO:0007782
data:
  {"alleles_by_uniquename":{"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_02266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02266","name":"rad24delta","uniquename":"SJAG_02266:allele-1"},"SJAG_02576:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02576","name":"rad25delta","uniquename":"SJAG_02576:allele-1"},"SJAG_02771:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02771","name":"rad1delta","uniquename":"SJAG_02771:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121272,121273,121274,121275,121276,121277,121279,121280,121562,121566],"is_not":false,"summary":null,"term":"FYPO:0007782"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the transition from yeast-form to hyphal growth does not occur under conditions that normally induce it.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal hyphal growth","termid":"FYPO:0007773"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00429":null,"SJAG_01205":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_02266":null,"SJAG_02576":null,"SJAG_02771":null},"genotype_count":8,"genotypes_by_uniquename":{"chk1delta":{"display_name":"chk1delta","display_uniquename":"chk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]}]},"crb2delta":{"display_name":"crb2delta","display_uniquename":"crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"rad1delta":{"display_name":"rad1delta","display_uniquename":"rad1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02771:allele-1","expression":"Null"}]}]},"rad24delta":{"display_name":"rad24delta","display_uniquename":"rad24delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02266:allele-1","expression":"Null"}]}]},"rad25delta":{"display_name":"rad25delta","display_uniquename":"rad25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02576:allele-1","expression":"Null"}]}]},"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]},"rad9delta":{"display_name":"rad9delta","display_uniquename":"rad9delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01605:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0007773"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0007773"],"is_obsolete":false,"name":"abolished hyphal transition","references_by_uniquename":{"PMID:20368354":null,"PMID:23090706":null},"single_locus_annotated_genes":["SJAG_02576","SJAG_00364","SJAG_00429","SJAG_01205","SJAG_01605","SJAG_02771","SJAG_01680","SJAG_02266"],"single_locus_genotype_uniquenames":["rad3delta","rad9delta","rad24delta","rad26delta","crb2delta","rad25delta","chk1delta","rad1delta"],"synonyms":[{"name":"abolished transition to hyphal growth","type":"exact"},{"name":"hyphal transition abolished","type":"exact"}],"termid":"FYPO:0007782","terms_by_termid":{"FYECO:0000137":null,"FYECO:0000314":null,"FYPO:0007782":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0001781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a neutrophil, any of the immature or mature forms of a granular leukocyte that in its mature form has a nucleus with three to five lobes connected by slender threads of chromatin, and cytoplasm containing fine inconspicuous granules and stainable by neutral dyes.","definition_xrefs":["PMID:12960266","CL:0000775","GOC:mtg_apoptosis","GOC:add","PMID:12752675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory cell apoptotic process","termid":"GO:0006925"},{"relation_name":"is_a","term_name":"myeloid cell apoptotic process","termid":"GO:0033028"},{"relation_name":"is_a","term_name":"leukocyte apoptotic process","termid":"GO:0071887"},{"relation_name":"part_of","term_name":"neutrophil homeostasis","termid":"GO:0001780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil apoptotic process","synonyms":[{"name":"apoptosis of neutrophils","type":"exact"},{"name":"neutrophil apoptosis","type":"narrow"},{"name":"neutrophil programmed cell death by apoptosis","type":"exact"},{"name":"programmed cell death of neutrophils by apoptosis","type":"exact"},{"name":"programmed cell death, neutrophils","type":"exact"}],"termid":"GO:0001781"}


id: PBO:0112867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3 lysine methyltransferase Set3","termid":"PBO:0112867"}


id: PBO:0114139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosyl hydrolase family 3, Ghf3","termid":"PBO:0114139"}


id: MONDO:0006768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Narrowing of the pyloric lumen caused either by hypertrophy of the surrounding muscles or tissue scarring due to a chronic peptic ulcer.","definition_xrefs":["NCIT:C34966"],"gene_count":0,"genotype_count":0,"name":"obsolete gastric outlet obstruction (obsolete MONDO:0006768)","termid":"MONDO:0006768","xrefs":{"Monarch":{"xref_id":"0006768"}}}


id: GO:0044486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the transmission of a nerve impulse in another organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of transmission of nerve impulse in another organism (obsolete GO:0044486)","synonyms":[{"name":"modulation of conduction of nerve impulse in other organism","type":"exact"},{"name":"modulation of transmission of nerve impulse in other organism","type":"exact"},{"name":"regulation of transmission of nerve impulse in other organism","type":"exact"}],"termid":"GO:0044486"}


id: PBO:0086485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative nucleotide sugar transporter; has similarity to Vrg4p","termid":"PBO:0086485"}


id: PBO:0002845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex, histone acetyltransferase subunit Elp3 (predicted)","termid":"PBO:0002845"}


id: PBO:0041318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 69 pseudogene 4","termid":"PBO:0041318"}


id: PBO:0083357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene NUP159/YIL115C","termid":"PBO:0083357"}


id: SO:0001669
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The minimal portion of the promoter required to properly initiate transcription in RNA polymerase II transcribed genes.","definition_xrefs":["PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_II_core_promoter","synonyms":[{"name":"RNApol II core promoter","type":"exact"}],"termid":"SO:0001669"}


id: PBO:0055943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 52","termid":"PBO:0055943"}


id: PBO:0034561
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_actomyosin_contractile_ring_contraction","termid":"PBO:0034561"}


id: PBO:0062554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily S member 24 pseudogene","termid":"PBO:0062554"}


id: MONDO:0010201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multicentric osteolysis-nodulosis-arthropathy spectrum","termid":"MONDO:0018298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Winchester syndrome","secondary_identifiers":["MEDGEN:98152","UMLS:C0432289","GARD:7894","SCTID:254151006","MESH:C536709","NORD:1857","NCIT:C170731","ICD9:733.29","DOID:0080696","OMIM:277950"],"synonyms":[{"name":"Al-Qeel Sewairi syndrome","type":"related"},{"name":"MMP14-related multicentric osteolysis, nodulosis, and arthropathy","type":"exact"},{"name":"MONA, MMP14-related","type":"exact"},{"name":"NOA syndrome","type":"related"},{"name":"WNCHRS","type":"exact"},{"name":"Winchester syndrome","type":"exact"},{"name":"multicentric osteolysis, nodulosis and arthropathy","type":"related"},{"name":"multicentric osteolysis, nodulosis and arthropathy, MMP14-related","type":"exact"},{"name":"nodulosis arthropathy osteolysis syndrome","type":"related"}],"termid":"MONDO:0010201","xrefs":{"Monarch":{"xref_id":"0010201"}}}


id: PBO:0036126
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytoplasmic_microtubule_nucleation","termid":"PBO:0036126"}


id: MONDO:0013689
data:
  {"annotated_genes":["SJAG_04950"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87461],"is_not":false,"summary":null,"term":"MONDO:0013689"}]},"cv_name":"mondo","definition":"Any 46 XX gonadal dysgenesis in which the cause of the disease is a mutation in the PSMC3IP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"46 XX gonadal dysgenesis","termid":"MONDO:0009299"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"ovarian dysgenesis 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3280471","DOID:0080495","MEDGEN:482101","GARD:18041","OMIM:614324"],"synonyms":[{"name":"46 XX gonadal dysgenesis caused by mutation in PSMC3IP","type":"exact"},{"name":"ODG3","type":"related"},{"name":"PSMC3IP 46 XX gonadal dysgenesis","type":"exact"},{"name":"ovarian dysgenesis 3","type":"exact"},{"name":"ovarian dysgenesis type 3","type":"exact"}],"termid":"MONDO:0013689","terms_by_termid":{"MONDO:0013689":null},"xrefs":{"Monarch":{"xref_id":"0013689"}}}


id: MONDO:0859615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse astrocytoma that is a diffusely infiltrative astroglial neoplasm composed of monomorphic cells with genetic alterations in MYB or MYBL1.","definition_xrefs":["DOID:0081279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse astrocytoma","termid":"MONDO:0016686"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diffuse astrocytoma, MYB- or MYBL1-altered","termid":"MONDO:0859615","xrefs":{"Monarch":{"xref_id":"0859615"}}}


id: FYPO:0007122
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of assembly of one or more mitochondrial respiratory chain complexes is decreased.","definition_xrefs":["PomBase:mah","PMID:31350787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitochondrial respiratory chain complex assembly","synonyms":[{"name":"decreased mitochondrial respiratory chain complex assembly during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial respiratory chain complex assembly during vegetative growth","type":"exact"},{"name":"decreased mitochondrial respiratory complex assembly","type":"exact"},{"name":"reduced mitochondrial respiratory chain complex assembly","type":"exact"}],"termid":"FYPO:0007122"}


id: PBO:0034136
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_2D_boundary","termid":"PBO:0034136"}


id: PBO:0070226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 160 pseudogene","termid":"PBO:0070226"}


id: PBO:0028530
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_glucose_starvation","termid":"PBO:0028530"}


id: GO:0098830
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An endosome present in the presynapse that fuses with endocytic vesicles arising in the presynaptic endocytic zone. This organelle is believed to be involved in regeneration of synaptic vesicles.","definition_xrefs":["PMID:20200227","PMID:25939282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome","termid":"GO:0005768"},{"relation_name":"part_of","term_name":"presynapse","termid":"GO:0098793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737","GO:0005768"],"is_obsolete":false,"name":"presynaptic endosome","termid":"GO:0098830"}


id: PBO:0030400
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_import","termid":"PBO:0030400"}


id: PBO:0088145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar transporter; exports large neutral amino acids from the vacuole; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters","termid":"PBO:0088145"}


id: FYPO:0003812
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning is abnormal near the promoter regions of genes that are expressed in response to stress. Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["GO:0016584","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning at protein-coding gene","termid":"FYPO:0007833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"abnormal nucleosome positioning at stress response genes","synonyms":[{"name":"abnormal nucleosome occupancy at stress response genes","type":"related"},{"name":"abnormal nucleosome positioning at stress response genes during mitotic cell cycle","type":"related"},{"name":"abnormal nucleosome positioning at stress response genes during vegetative growth","type":"exact"},{"name":"abnormal nucleosome spacing at stress response genes","type":"exact"}],"termid":"FYPO:0003812"}


id: FYPO:0006834
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of primary cell septum biogenesis is increased.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal primary cell septum biogenesis","termid":"FYPO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000032"],"is_obsolete":false,"name":"increased rate of primary cell septum biogenesis","synonyms":[{"name":"decreased duration of primary cell septum biogenesis","type":"related"},{"name":"increased rate of primary cell septum biogenesis during mitotic cell cycle","type":"related"},{"name":"increased rate of primary cell septum biogenesis during vegetative growth","type":"exact"},{"name":"increased rate of primary septum biogenesis","type":"exact"},{"name":"increased rate of primary septum synthesis","type":"related"}],"termid":"FYPO:0006834"}


id: PR:Q10055
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic initiation factor 4A-III that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00098","PANTHER:PTHR24031:SF143","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase fal1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.10","secondary_identifiers":["UniProtKB:Q10055"],"synonyms":[{"name":"Spom972h-EIF4A3","type":"exact"}],"termid":"PR:Q10055"}


id: GO:0019732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response against a fungus mediated through a body fluid. An example of this process is the antifungal humoral response in Drosophila melanogaster.","definition_xrefs":["GOC:go_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial humoral response","termid":"GO:0019730"},{"relation_name":"is_a","term_name":"defense response to fungus","termid":"GO:0050832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antifungal humoral response","secondary_identifiers":["GO:0006966","GO:0019734"],"termid":"GO:0019732"}


id: MONDO:0014843
data:
  {"annotated_genes":["SJAG_04114"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87447],"is_not":false,"summary":null,"term":"MONDO:0014843"}]},"cv_name":"mondo","definition":"Any primary ovarian failure in which the cause of the disease is a mutation in the ERCC6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04114":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616946","DOID:0080868","DOID:0080869","MEDGEN:934750","UMLS:C4310783"],"synonyms":[{"name":"ERCC6 primary ovarian failure","type":"exact"},{"name":"POF11","type":"exact"},{"name":"premature ovarian failure 11","type":"exact"},{"name":"premature ovarian failure 11; POF11","type":"exact"},{"name":"premature ovarian failure type 11","type":"exact"},{"name":"primary ovarian failure caused by mutation in ERCC6","type":"exact"}],"termid":"MONDO:0014843","terms_by_termid":{"MONDO:0014843":null},"xrefs":{"Monarch":{"xref_id":"0014843"}}}


id: FYPO:0001126
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121614,121596,121602],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0001122"},{"annotations":[121427],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0007701"},{"annotations":[121511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001956"},{"annotations":[121262,121225,121230,121236],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0002380"},{"annotations":[121532,121525,121526],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0001877"},{"annotations":[121531,121530],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0006616"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell has an abnormal shape.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell morphology","termid":"FYPO:0000005"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00266":null,"SJAG_00514":null,"SJAG_01794":null,"SJAG_02592":null,"SJAG_02819":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03581":null,"SJAG_04280":null,"SJAG_04312":null,"SJAG_04332":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":14,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D 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type"}]}]},"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"gef1delta":{"display_name":"gef1delta","display_uniquename":"gef1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03581:allele-1","expression":"Null"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga6delta":{"display_name":"rga6delta","display_uniquename":"rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G 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shape","references_by_uniquename":{"PMID:25866389":null,"PMID:27678009":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_00266","SJAG_01794","SJAG_02592","SJAG_04332","SJAG_04312","SJAG_00514","SJAG_03581","SJAG_03048","SJAG_03453","SJAG_00028","SJAG_04522","SJAG_04703","SJAG_02819","SJAG_04280"],"single_locus_genotype_uniquenames":["atf1delta","scd1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","gef1delta","rga4delta","rga6delta","efc25delta","scd2delta","pka1delta","sty1delta","for3delta","ras1delta"],"synonyms":[{"name":"misshapen cell","type":"related"}],"termid":"FYPO:0001126","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0001122":null,"FYPO:0001877":null,"FYPO:0001956":null,"FYPO:0002380":null,"FYPO:0006616":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: MONDO:0010457
data:
  {"annotated_genes":["SJAG_04631"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88734],"is_not":false,"summary":null,"term":"MONDO:0010457"}]},"cv_name":"mondo","definition":"Ogden syndrome is a rare, genetic progeroid syndrome characterized by a variable phenotype including postnatal growth delay, severe global developmental delay, hypotonia, non-specific dysmorphic facies with aged appearance and cryptorchidism, as well as cardiac arrthymias and skeletal anomalies. Patients typically present with widely opened fontanels, mainly truncal hypotonia, a waddling gait with hypertonia of the extremities, small hands and feet, broad great toes, scoliosis and redundant skin with lack of subcutaneous fat.","definition_xrefs":["Orphanet:276432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"is_a","term_name":"NAA10-related syndrome","termid":"MONDO:0100124"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"Ogden syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3275447","HGNC:7645","MEDGEN:477078","MESH:C536107","DOID:0050781","NCIT:C188215","OMIM:300855","GARD:17281"],"synonyms":[{"name":"Acetyl-CoA:arylamine n-acetyltransferase","type":"related"},{"name":"N acetyltransferase 1 deficiency","type":"related"},{"name":"N acetyltransferase deficiency","type":"related"},{"name":"N-alpha-acetyltransferase","type":"exact"},{"name":"N-terminal acetyltransferase deficiency","type":"exact"},{"name":"NAT1 deficiency","type":"related"},{"name":"OGDNS","type":"exact"},{"name":"Ogden syndrome","type":"exact"},{"name":"Ogden syndrome, X-linked recessive, X-linked dominant","type":"exact"},{"name":"X-linked malformation and infantile lethality syndrome","type":"exact"},{"name":"arylamine n-acetyltransferase 1","type":"related"},{"name":"premature ageing appearance-developmental delay-cardiac arrhythmia syndrome","type":"exact"},{"name":"premature aging appearance-developmental delay-cardiac arrhythmia syndrome","type":"exact"}],"termid":"MONDO:0010457","terms_by_termid":{"MONDO:0010457":null},"xrefs":{"Monarch":{"xref_id":"0010457"}}}


id: PBO:0077653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 1B","termid":"PBO:0077653"}


id: PBO:0066407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RELB proto-oncogene, NF-kB subunit","termid":"PBO:0066407"}


id: PBO:0042825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase 4A","termid":"PBO:0042825"}


id: PBO:0072838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP30BP antisense RNA 1","termid":"PBO:0072838"}


id: GO:0090340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of secretion of lysosomal enzymes, the controlled release of lysosomal enzymes by a cell.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"regulation of secretion of lysosomal enzymes","termid":"GO:0090182"},{"relation_name":"positively_regulates","term_name":"secretion of lysosomal enzymes","termid":"GO:0033299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of secretion of lysosomal enzymes","termid":"GO:0090340"}


id: PBO:0046986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member K, pseudogene","termid":"PBO:0046986"}


id: FYPO:0000735
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the meiotic spindle is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short spindle","termid":"FYPO:0000130"},{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000120","FYPO:0002399"],"is_obsolete":false,"name":"short meiotic spindle","synonyms":[{"name":"decreased meiotic spindle length","type":"exact"},{"name":"short meiotic spindles","type":"exact"},{"name":"short spindle during meiosis","type":"exact"}],"termid":"FYPO:0000735"}


id: GO:0043914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + sulfur = hydrogen sulfide + NADP+.","definition_xrefs":["GOC:jl","PMID:17449625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"NADPH:sulfur oxidoreductase activity","secondary_identifiers":["EC:1.8.1.18"],"synonyms":[{"name":"CoA-dependent NAD(P)H sulfur oxidoreductase activity","type":"exact"},{"name":"NAD(P)H elemental sulfur oxidoreductase activity","type":"exact"},{"name":"NAD(P)H sulfur oxidoreductase activity","type":"exact"},{"name":"NAD(P)H sulphur oxidoreductase activity","type":"exact"},{"name":"NAD(P)H:sulfur oxidoreductase activity","type":"exact"},{"name":"NADPH:sulphur oxidoreductase activity","type":"exact"},{"name":"NSR","type":"exact"},{"name":"coenzyme A-dependent NAD(P)H sulfur oxidoreductase activity","type":"exact"}],"termid":"GO:0043914"}


id: PBO:0086025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; transcriptionally regulated by Upc2p via an upstream sterol response element; strong increase in transcript abundance during anaerobic growth compared to aerobic growth; cells deleted for YML083C do not exhibit growth defects in anerobic or anaerobic conditions","termid":"PBO:0086025"}


id: GO:0141143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont alters or subverts cell adhesion to the extracellular matrix in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:22534208","PMID:30345086"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated disruption of host cell adhesion to extracellular matrix (obsolete GO:0141143)","synonyms":[{"name":"disruption by symbiont of host cell adhesion to extracellular matrix","type":"exact"}],"termid":"GO:0141143"}


id: PBO:0116545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dihydrolipoamide S-acetyltransferase (e2 component), Lat1","termid":"PBO:0116545"}


id: PBO:0040746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain cytoplasmic RNA 1, pseudogene 1","termid":"PBO:0040746"}


id: PBO:0071490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 31","termid":"PBO:0071490"}


id: PBO:0028877
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_maltose_carbon_source","termid":"PBO:0028877"}


id: CHEBI:51143
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrogen molecular entity","termid":"CHEBI:51143"}


id: GO:0061266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the interstitial fibroblasts of the mesonephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"kidney interstitial fibroblast differentiation","termid":"GO:0072071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric interstitial fibroblast differentiation","synonyms":[{"name":"mesonephros interstitial cell differentiation","type":"exact"}],"termid":"GO:0061266"}


id: GO:0090403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular senescence process associated with the dismantling of a cell as a response to oxidative stress, e.g. high levels of reactive oxygen species, such as superoxide anions, hydrogen peroxide, and hydroxyl radicals.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stress-induced premature senescence","termid":"GO:0090400"},{"relation_name":"part_of","term_name":"cellular response to oxidative stress","termid":"GO:0034599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oxidative stress-induced premature senescence","termid":"GO:0090403"}


id: GO:0036196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving zymosterol, (5alpha-cholesta-8,24-dien-3beta-ol).","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol metabolic process","termid":"GO:0016125"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"zymosterol metabolic process","termid":"GO:0036196"}


id: MONDO:0060622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A complex neurodevelopmental disorder caused by variation in DHX30. Individuals with variants in DHX30 have been found to have variable presentations including intellectual disability, delayed or absent speech development, delayed motor development, hypotonia, feeding difficulties, and ataxic gait or the inability to walk. Other phenotypic features commonly reported include sleep disorders, autistic features, seizures, and joint hypermobility","definition_xrefs":["PMID:29100085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex neurodevelopmental disorder","termid":"MONDO:0100038"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with severe motor impairment and absent language","secondary_identifiers":["Orphanet:647788","GARD:13608","MEDGEN:1622162","UMLS:C4540496","OMIM:617804"],"synonyms":[{"name":"DHX30-related complex neurodevelopmental disorder","type":"exact"},{"name":"NEDMIAL","type":"related"},{"name":"neurodevelopmental delay-intellectual disability-ataxia-feeding difficulty syndrome","type":"exact"},{"name":"neurodevelopmental disorder with severe motor impairment and absent language","type":"exact"}],"termid":"MONDO:0060622","xrefs":{"Monarch":{"xref_id":"0060622"}}}


id: PBO:0066402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regenerating family member 4","termid":"PBO:0066402"}


id: GO:0005567
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic ribosomal RNA (obsolete GO:0005567)","synonyms":[{"name":"cytosolic ribosomal RNA","type":"exact"}],"termid":"GO:0005567"}


id: MONDO:0015568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated congenital nasal pyriform aperture stenosis","secondary_identifiers":["Orphanet:162516","GARD:20039"],"synonyms":[{"name":"isolated apertura pyriformis stenosis","type":"exact"},{"name":"isolated nasal pyriform aperture hypoplasia","type":"exact"}],"termid":"MONDO:0015568","xrefs":{"Monarch":{"xref_id":"0015568"}}}


id: SO:0002018
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant occurring within a conserved region of an intron.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron_variant","termid":"SO:0001627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved_intron_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:conserved_intron_variant","type":"exact"},{"name":"conserved intron variant","type":"exact"},{"name":"snpEff:INTRON_CONSERVED","type":"exact"}],"termid":"SO:0002018"}


id: FYECO:0000207
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[121605,121617,121314,121318,121326,121299],"is_not":false,"summary":null,"term":"FYECO:0000207"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which potassium chloride was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00610":null,"SJAG_02592":null,"SJAG_04551":null},"genotype_count":5,"genotypes_by_uniquename":{"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"name":"+ KCl","references_by_uniquename":{"PMID:31150379":null,"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_00266","SJAG_04551","SJAG_02592","SJAG_00610"],"single_locus_genotype_uniquenames":["Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pck2delta","sty1delta","atf1delta","pmk1delta"],"synonyms":[{"name":"potassium chloride added","type":"exact"}],"termid":"FYECO:0000207","terms_by_termid":{"FYECO:0000207":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0009997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from specifying into a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardioblast cell fate specification","termid":"GO:0042686"},{"relation_name":"is_a","term_name":"negative regulation of cardioblast differentiation","termid":"GO:0051892"},{"relation_name":"is_a","term_name":"negative regulation of cardiac cell fate specification","termid":"GO:2000044"},{"relation_name":"negatively_regulates","term_name":"cardioblast cell fate specification","termid":"GO:0042685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardioblast cell fate specification","secondary_identifiers":["GO:0042687"],"synonyms":[{"name":"down regulation of cardioblast cell fate specification","type":"exact"},{"name":"down-regulation of cardioblast cell fate specification","type":"exact"},{"name":"downregulation of cardioblast cell fate specification","type":"exact"},{"name":"inhibition of cardioblast cell fate specification","type":"narrow"},{"name":"suppression of cardioblast cell fate","type":"exact"}],"termid":"GO:0009997"}


id: PR:Q09739
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiotic nuclear division protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13A11.03","secondary_identifiers":["UniProtKB:Q09739"],"synonyms":[{"name":"Spom972h-MND1","type":"exact"},{"name":"meiotically up-regulated gene 32 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09739"}


id: PBO:0073338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 15, pseudogene","termid":"PBO:0073338"}


id: GO:0045800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of chitin-based cuticular tanning.","definition_xrefs":["GOC:jid","GOC:mtg_sensu","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chitin-based cuticle tanning","termid":"GO:0007564"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"chitin-based cuticle sclerotization","termid":"GO:0007593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chitin-based cuticle tanning","synonyms":[{"name":"down regulation of cuticle tanning","type":"exact"},{"name":"down-regulation of cuticle tanning","type":"exact"},{"name":"downregulation of cuticle tanning","type":"exact"},{"name":"inhibition of cuticle tanning","type":"narrow"},{"name":"negative regulation of cuticle hardening","type":"narrow"},{"name":"negative regulation of cuticle tanning","type":"exact"}],"termid":"GO:0045800"}


id: GO:0010478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A respiratory electron flow (from NAD(P)H to plastoquinone (PQ) and O2) involving both a nonphotochemical reduction and re-oxidation of PQ pool.","definition_xrefs":["GOC:mtg_electron_transport","GOC:tb","PMID:17573537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory electron transport chain","termid":"GO:0022904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"chlororespiration","termid":"GO:0010478"}


id: PBO:0047441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma binding protein","termid":"PBO:0047441"}


id: MONDO:0975748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parkinson disease 26, autosomal dominant, susceptibility to","secondary_identifiers":["OMIM:620923"],"termid":"MONDO:0975748","xrefs":{"Monarch":{"xref_id":"0975748"}}}


id: GO:0018411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a protein by amino acid glucuronidation.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein glucuronidation (obsolete GO:0018411)","synonyms":[{"name":"protein amino acid glucuronidation","type":"exact"}],"termid":"GO:0018411"}


id: PBO:0081616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 544","termid":"PBO:0081616"}


id: PBO:0042420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 4","termid":"PBO:0042420"}


id: GO:0071541
data:
  {"annotated_genes":["SJAG_02995","SJAG_04981","SJAG_04891","SJAG_03147","SJAG_02628","SJAG_02164","SJAG_04744","SJAG_03472","SJAG_04900"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60093,76180,76937,77402,96687,98764,99644,100844,107554],"is_not":false,"summary":null,"term":"GO:0071541"}]},"cv_name":"cellular_component","definition":"An eukaryotic translation initiation factor 3 complex that contains the PCI-domain protein eIF3m.","definition_xrefs":["PMID:15904532","PMID:19061185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic translation initiation factor 3 complex","termid":"GO:0005852"}],"gene_count":9,"genes_by_uniquename":{"SJAG_02164":null,"SJAG_02628":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03472":null,"SJAG_04744":null,"SJAG_04891":null,"SJAG_04900":null,"SJAG_04981":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 complex, eIF3m","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"eIF3m-containing eukaryotic translation initiation factor 3 complex","type":"exact"}],"termid":"GO:0071541","terms_by_termid":{"GO:0071541":null}}


id: MONDO:0003610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An exceptionally rare cystadenoma that arises from the rete ovarii.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rete ovarii adenoma","termid":"MONDO:0004005"},{"relation_name":"is_a","term_name":"ovarian cystadenoma","termid":"MONDO:0005183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rete ovarii cystadenoma","secondary_identifiers":["DOID:5725","NCIT:C40019","UMLS:C1514907","MEDGEN:308160"],"synonyms":[{"name":"rete ovarii cystadenoma","type":"exact"}],"termid":"MONDO:0003610","xrefs":{"Monarch":{"xref_id":"0003610"}}}


id: MONDO:0003080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete indolent systemic mastocytosis (obsolete MONDO:0003080)","termid":"MONDO:0003080","xrefs":{"Monarch":{"xref_id":"0003080"}}}


id: PBO:0051609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 33","termid":"PBO:0051609"}


id: MONDO:0024583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. The protrusion of part of an organ or fibroadipose tissue through an abnormal opening.","definition_xrefs":["NCIT:C34685"],"gene_count":0,"genotype_count":0,"name":"obsolete hernia (obsolete MONDO:0024583)","secondary_identifiers":["ICD10CM:K40-K46","MESH:D006547"],"synonyms":[{"name":"enterocele","type":"narrow"},{"name":"hernias","type":"related"}],"termid":"MONDO:0024583","xrefs":{"Monarch":{"xref_id":"0024583"}}}


id: GO:0006787
data:
  {"annotated_genes":["SJAG_00366"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042167"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound metabolic process","termid":"GO:0006778"},{"relation_name":"is_a","term_name":"tetrapyrrole catabolic process","termid":"GO:0033015"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00366":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"porphyrin-containing compound catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"porphyrin breakdown","type":"related"},{"name":"porphyrin catabolic process","type":"related"},{"name":"porphyrin catabolism","type":"related"},{"name":"porphyrin degradation","type":"related"}],"termid":"GO:0006787","terms_by_termid":{"GO:0042167":null}}


id: MONDO:0006007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal flow of urine from the urinary bladder back into the ureters.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ureteral disorder","termid":"MONDO:0001926"},{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicoureteral reflux","secondary_identifiers":["DOID:9620","HP:0000076","EFO:0007536","MESH:D014718","NANDO:2200179","SCTID:197811007","MEDGEN:21852","UMLS:C0042580","ICD9:593.7","icd11.foundation:2142055506"],"synonyms":[{"name":"vesico-ureteral reflux","type":"exact"},{"name":"vesicoureteral reflux","type":"exact"},{"name":"vesicoureteral reflux (disease)","type":"exact"}],"termid":"MONDO:0006007","xrefs":{"Monarch":{"xref_id":"0006007"}}}


id: MONDO:0013942
data:
  {"annotated_genes":["SJAG_03440"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89089],"is_not":false,"summary":null,"term":"MONDO:0013942"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX16 defect","termid":"MONDO:0100269"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03440":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0019053","MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"peroxisome biogenesis disorder 8A (Zellweger)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080483","MEDGEN:766873","UMLS:C3553959","OMIM:614876","GARD:15869"],"synonyms":[{"name":"PBD8A","type":"related"},{"name":"peroxisome biogenesis disorder 8A (Zellweger)","type":"exact"},{"name":"peroxisome biogenesis disorder, complementation group 9","type":"related"},{"name":"peroxisome biogenesis disorder, complementation group D","type":"related"}],"termid":"MONDO:0013942","terms_by_termid":{"MONDO:0013942":null},"xrefs":{"Monarch":{"xref_id":"0013942"}}}


id: FYPO:0007918
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RNA 3' end processing is abnormal.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"abnormal RNA 3'-end processing","termid":"FYPO:0007918"}


id: PBO:0039876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 32","termid":"PBO:0039876"}


id: GO:0016679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a diphenol or related substance acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on diphenols and related substances as donors","secondary_identifiers":["EC:1.10.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on diphenols and related substances as donors, other acceptors","type":"narrow"}],"termid":"GO:0016679"}


id: PBO:0058507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5697","termid":"PBO:0058507"}


id: GO:0047070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + 3-(2,3-dihydroxyphenyl)propanoate = 2-hydroxy-6-oxonona-2,4-diene-1,9-dioate.","definition_xrefs":["EC:1.13.11.16","MetaCyc:1.13.11.16-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-carboxyethylcatechol 2,3-dioxygenase activity","secondary_identifiers":["GO:0008669","RHEA:23840"],"synonyms":[{"name":"2,3-dihydroxy-beta-phenylpropionate oxygenase activity","type":"related"},{"name":"2,3-dihydroxy-beta-phenylpropionic dioxygenase activity","type":"related"},{"name":"3-(2,3-dihydroxyphenyl)propanoate:oxygen 1,2-oxidoreductase (decyclizing)","type":"related"},{"name":"3-(2,3-dihydroxyphenyl)propanoate:oxygen 1,2-oxidoreductase activity","type":"related"}],"termid":"GO:0047070"}


id: GO:0010049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a plant acquires the ability to respond to a floral inductive signal.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acquisition of plant reproductive competence","synonyms":[{"name":"acquisition of reproductive competence","type":"broad"}],"termid":"GO:0010049"}


id: GO:0034749
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the Scribble protein (a cell polarity determinant) and the tumor suppressor protein adenomatous polyposis coli (APC); may be involved in the control of cell proliferation.","definition_xrefs":["PMID:16611247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Scrib-APC complex","synonyms":[{"name":"hScrib-APC complex","type":"narrow"}],"termid":"GO:0034749"}


id: GO:0032755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-6 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-6 production","termid":"GO:0032675"},{"relation_name":"positively_regulates","term_name":"interleukin-6 production","termid":"GO:0032635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-6 production","secondary_identifiers":["GO:2000778","GO:0045410"],"synonyms":[{"name":"activation of interleukin-6 production","type":"narrow"},{"name":"positive regulation of IL-6 production","type":"exact"},{"name":"positive regulation of interleukin-6 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-6 secretion","type":"narrow"},{"name":"stimulation of interleukin-6 production","type":"narrow"},{"name":"up regulation of interleukin-6 production","type":"exact"},{"name":"up-regulation of interleukin-6 production","type":"exact"},{"name":"upregulation of interleukin-6 production","type":"exact"}],"termid":"GO:0032755"}


id: GO:0030366
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the conversion of precursor Z to molybdopterin, the final step in molybdopterin biosynthesis.","definition_xrefs":["PMID:18154309","PMID:8514783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003674","GO:0016782","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"molybdopterin synthase activity","secondary_identifiers":["Reactome:R-HSA-947541","EC:2.8.1.12","RHEA:26333"],"termid":"GO:0030366"}


id: GO:1990569
data:
  {"annotated_genes":["SJAG_00434"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79359],"is_not":false,"summary":null,"term":"GO:1990569"}]},"cv_name":"biological_process","definition":"The process in which UDP-N-acetylglucosamine is transported across a membrane.","definition_xrefs":["PMID:10788474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transport","termid":"GO:0090481"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0015788"],"synonyms":[{"name":"UDP-N-acetylglucosamine transport","type":"related"}],"termid":"GO:1990569","terms_by_termid":{"GO:1990569":null}}


id: GO:0070508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cholesterol into a cell or organelle.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"cholesterol import","synonyms":[{"name":"cholesterol uptake","type":"exact"}],"termid":"GO:0070508"}


id: PBO:0044304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 domain containing 1","termid":"PBO:0044304"}


id: PBO:0113214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein, putative acetyltransferase; similar to bacterial galactoside O-acetyltransferases; induced by oleate in OAF1/PIP2-dependent manner; promoter contains oleate response element consensus sequence; mutation decreases salt tolerance; non-essential gene","termid":"PBO:0113214"}


id: PBO:0063260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 6","termid":"PBO:0063260"}


id: GO:1904813
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any membrane-enclosed lumen that is part of a ficolin-1-rich granule.","definition_xrefs":["GOC:TermGenie","PMID:23650620","GO_REF:0000064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"ficolin-1-rich granule","termid":"GO:0101002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"ficolin-1-rich granule lumen","synonyms":[{"name":"ficolin-1-rich granule membrane-enclosed lumen","type":"exact"},{"name":"membrane-enclosed lumen of ficolin granule","type":"related"},{"name":"membrane-enclosed lumen of ficolin-1 rich granule","type":"exact"},{"name":"membrane-enclosed lumen of ficolin-1-rich granule","type":"exact"}],"termid":"GO:1904813"}


id: GO:1990188
data:
  {"annotated_genes":["SJAG_00471","SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107335,117996],"is_not":false,"summary":null,"term":"GO:1990188"}]},"cv_name":"molecular_function","definition":"Binding to euchromatin, a dispersed and relatively uncompacted form of chromatin.","definition_xrefs":["GOC:vw","PMID:22431512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin binding","termid":"GO:0003682"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00471":null,"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"euchromatin binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990188","terms_by_termid":{"GO:1990188":null}}


id: PR:Q09837
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI mannosyltransferase 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00306","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI mannosyltransferase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.12c","secondary_identifiers":["UniProtKB:Q09837"],"synonyms":[{"name":"GPI mannosyltransferase IV (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GPI-MT-IV (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PIGZ","type":"exact"}],"termid":"PR:Q09837"}


id: MONDO:0005961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic inflammatory process affecting the mucous membranes of any sinus cavity.","definition_xrefs":["NCIT:C35024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus disorder","termid":"MONDO:0001735"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sinusitis","secondary_identifiers":["ICD9:461.9","EFO:0007486","MEDGEN:20772","ICD9:461","MESH:D012852","UMLS:C0037199","SCTID:36971009","DOID:0050127"],"termid":"MONDO:0005961","xrefs":{"Monarch":{"xref_id":"0005961"}}}


id: GO:7770001
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An inner mitochondrial protein carrier capable of transporting pyruvate into the mitochondrion.","definition_xrefs":["PMID:22628554","PMID:22628558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"},{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"mitochondrial pyruvate carrier complex","termid":"GO:7770001"}


id: FYPO:0006837
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dephosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during cytokinesis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein modification during vegetative growth","termid":"FYPO:0000547"},{"relation_name":"is_a","term_name":"abnormal protein dephosphorylation during vegetative growth","termid":"FYPO:0005956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased protein dephosphorylation during cytokinesis","synonyms":[{"name":"increased protein dephosphorylation during cytokinesis during vegetative growth","type":"exact"},{"name":"increased protein/peptide dephosphorylation during cytokinesis","type":"exact"}],"termid":"FYPO:0006837"}


id: GO:0033972
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: amidinoproclavaminate + H2O = proclavaminate + urea.","definition_xrefs":["RHEA:17001","EC:3.5.3.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"proclavaminate amidinohydrolase activity","secondary_identifiers":["KEGG_REACTION:R05357","MetaCyc:3.5.3.22-RXN"],"synonyms":[{"name":"PAH","type":"related"},{"name":"proclavaminate amidino hydrolase activity","type":"related"},{"name":"proclavaminic acid amidino hydrolase activity","type":"related"}],"termid":"GO:0033972"}


id: PBO:0041555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 38","termid":"PBO:0041555"}


id: PBO:0080263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 26 pseudogene","termid":"PBO:0080263"}


id: PBO:0084213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homodimeric protein that is packaged into COPII vesicles; cycles between the ER and Golgi; involved in secretory transport but not directly required for aspects of transport assayed in vitro; may influence membrane composition","termid":"PBO:0084213"}


id: FYPO:0006726
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which CMG complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal CMG complex assembly","synonyms":[{"name":"normal CMG complex assembly during mitotic cell cycle","type":"related"},{"name":"normal CMG complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0006726"}


id: GO:1903807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-threonine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GO_REF:0000075","GOC:TermGenie","PMID:23895341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"threonine transport","termid":"GO:0015826"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"L-threonine import across plasma membrane","secondary_identifiers":["GO:0036231"],"synonyms":[{"name":"L-threonine import","type":"broad"},{"name":"L-threonine import into cell","type":"exact"},{"name":"L-threonine uptake","type":"exact"}],"termid":"GO:1903807"}


id: FYECO:0000216
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were grown for up to 24 hours.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth timing","termid":"FYECO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth <24 hrs","synonyms":[{"name":"growth <24 hours","type":"exact"},{"name":"overnight culture","type":"related"}],"termid":"FYECO:0000216"}


id: PBO:0004510
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YIL051C","termid":"PBO:0004510"}


id: PBO:0026910
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_septated_mononucleate_vegetative_cell","termid":"PBO:0026910"}


id: PBO:0042204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin H","termid":"PBO:0042204"}


id: PBO:0045826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 16","termid":"PBO:0045826"}


id: PBO:0080558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain binding protein 2 pseudogene 1","termid":"PBO:0080558"}


id: PBO:0027789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_cell_with_decreased_poly(A)+_mRNA_export_from_nucleus","termid":"PBO:0027789"}


id: PBO:0041674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell adhesion molecule 2","termid":"PBO:0041674"}


id: MONDO:0014329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any atrial standstill in which the cause of the disease is a mutation in the NPPA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial standstill","termid":"MONDO:0015281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial standstill 2","secondary_identifiers":["MEDGEN:816731","DOID:0080663","OMIM:615745","GARD:18612","UMLS:C3810401"],"synonyms":[{"name":"ATRST2","type":"related"},{"name":"NPPA atrial standstill","type":"exact"},{"name":"atrial dilation and standstill","type":"related"},{"name":"atrial standstill 2","type":"exact"},{"name":"atrial standstill caused by mutation in NPPA","type":"exact"},{"name":"atrial standstill type 2","type":"exact"},{"name":"cardiomyopathy, atrial dilated, with atrial standstill","type":"related"}],"termid":"MONDO:0014329","xrefs":{"Monarch":{"xref_id":"0014329"}}}


id: PR:O74818
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A carboxypeptidase B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02688","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized carboxypeptidase C337.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.07c","secondary_identifiers":["UniProtKB:O74818"],"synonyms":[{"name":"Spom972h-CPB1","type":"exact"}],"termid":"PR:O74818"}


id: PATO:0000692
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's origin or development at an unusual time or out of the regular sequence.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochronic","termid":"PATO:0000692"}


id: PR:O13718
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vtc2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar transporter chaperone 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.11","synonyms":[{"name":"Spom972h-vtc2","type":"exact"}],"termid":"PR:O13718"}


id: MONDO:0020520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adult pulmonary Langerhans Cell Histiocytosis (PLCH) is a rare histiocytic lung disease characterized by the accumulation of Langerhans and other inflammatory cells in the small airways, resulting in the formation of nodular inflammatory lesions.","definition_xrefs":["Orphanet:99874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Langerhans cell histiocytosis specific to adulthood","termid":"MONDO:0017029"},{"relation_name":"is_a","term_name":"eosinophilic granuloma","termid":"MONDO:0020517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"adult pulmonary Langerhans cell histiocytosis","secondary_identifiers":["SCTID:328611000119105","UMLS:C3161104","ICD10CM:J84.82","icd11.foundation:792398738","MEDGEN:853967","NCIT:C142833"],"synonyms":[{"name":"PLCH","type":"exact"},{"name":"pulmonary Langerhans cell histiocytosis","type":"exact"},{"name":"pulmonary eosinophilic granuloma","type":"exact"},{"name":"pulmonary histiocytosis X","type":"exact"}],"termid":"MONDO:0020520","xrefs":{"Monarch":{"xref_id":"0020520"}}}


id: GO:0110010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of proteins from a cell at the sides which interface adjacent cells and near the base.","definition_xrefs":["GOC:ha","PMID:27404358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"basolateral protein secretion","termid":"GO:0110010"}


id: PBO:0090116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin binding WD repeat protein Aip1","termid":"PBO:0090116"}


id: MONDO:0004139
data:
  {"annotated_genes":["SJAG_05283","SJAG_01351","SJAG_00930","SJAG_02009","SJAG_00839","SJAG_04495","SJAG_02796","SJAG_02297","SJAG_00605","SJAG_04731","SJAG_04192","SJAG_03153","SJAG_03497","SJAG_02539","SJAG_01183","SJAG_01162","SJAG_04334","SJAG_00846","SJAG_00988","SJAG_01077","SJAG_04881"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"},{"annotations":[87280,87279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009134"},{"annotations":[87323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007109"},{"annotations":[88223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008494"},{"annotations":[87284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009902"},{"annotations":[87127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012204"},{"annotations":[87732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009259"},{"annotations":[88042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009284"},{"annotations":[87503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009295"},{"annotations":[88924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009113"},{"annotations":[88014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[88705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019531"},{"annotations":[89189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859172"},{"annotations":[87294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012981"},{"annotations":[88296,88297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009340"},{"annotations":[88235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008493"},{"annotations":[87273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012992"},{"annotations":[88754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010438"},{"annotations":[87786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014166"},{"annotations":[87424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"},{"annotations":[87025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012700"},{"annotations":[89057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019107"},{"annotations":[87465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008165"},{"annotations":[87616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014221"}]},"cv_name":"mondo","definition":"Anemia in which the red blood cell volume is normal.","definition_xrefs":["NCIT:C35142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00605":null,"SJAG_00839":null,"SJAG_00846":null,"SJAG_00930":null,"SJAG_00988":null,"SJAG_01077":null,"SJAG_01162":null,"SJAG_01183":null,"SJAG_01351":null,"SJAG_02009":null,"SJAG_02297":null,"SJAG_02539":null,"SJAG_02796":null,"SJAG_03153":null,"SJAG_03497":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04731":null,"SJAG_04881":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"normocytic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:39310","ICD9:285.8","DOID:720","UMLS:C0085577","SCTID:300980002"],"synonyms":[{"name":"anaemia normocytic","type":"exact"},{"name":"anemia normocytic","type":"exact"},{"name":"normocytic Anaemia","type":"exact"},{"name":"normocytic Anemia","type":"exact"}],"termid":"MONDO:0004139","terms_by_termid":{"MONDO:0007109":null,"MONDO:0008165":null,"MONDO:0008493":null,"MONDO:0008494":null,"MONDO:0009113":null,"MONDO:0009134":null,"MONDO:0009259":null,"MONDO:0009284":null,"MONDO:0009295":null,"MONDO:0009340":null,"MONDO:0009902":null,"MONDO:0009950":null,"MONDO:0010438":null,"MONDO:0010480":null,"MONDO:0012204":null,"MONDO:0012700":null,"MONDO:0012981":null,"MONDO:0012992":null,"MONDO:0013275":null,"MONDO:0014166":null,"MONDO:0014221":null,"MONDO:0019107":null,"MONDO:0019531":null,"MONDO:0859172":null},"xrefs":{"Monarch":{"xref_id":"0004139"}}}


id: PBO:0061902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid related nociceptin receptor 1","termid":"PBO:0061902"}


id: PBO:0040712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL6 transcription repressor","termid":"PBO:0040712"}


id: PBO:0004846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase (predicted)","termid":"PBO:0004846"}


id: PBO:0051441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-26 (pseudogene)","termid":"PBO:0051441"}


id: GO:2000379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of reactive oxygen species metabolic process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of reactive oxygen species metabolic process","termid":"GO:2000377"},{"relation_name":"positively_regulates","term_name":"reactive oxygen species metabolic process","termid":"GO:0072593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of reactive oxygen species metabolic process","synonyms":[{"name":"positive regulation of ROS metabolic process","type":"exact"},{"name":"positive regulation of reactive oxygen species metabolism","type":"exact"}],"termid":"GO:2000379"}


id: GO:0009861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The jasmonic acid and ethylene (ethene) dependent process that confers broad spectrum systemic resistance to disease in response to wounding or a pathogen.","definition_xrefs":["PMID:10234273","GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to wounding","termid":"GO:0009611"},{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"jasmonic acid and ethylene-dependent systemic resistance","synonyms":[{"name":"jasmonic acid and ethene-dependent systemic resistance","type":"exact"},{"name":"jasmonic acid/ethylene-dependent systemic resistance","type":"exact"}],"termid":"GO:0009861"}


id: GO:1901038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyanidin 3-O-beta-D-glucoside.","definition_xrefs":["PMID:21899608","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"},{"relation_name":"is_a","term_name":"beta-glucoside metabolic process","termid":"GO:1901804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside metabolic process","synonyms":[{"name":"cyanidin 3-O-beta-D-glucoside metabolic process","type":"exact"},{"name":"cyanidin 3-O-beta-D-glucoside metabolism","type":"exact"}],"termid":"GO:1901038"}


id: GO:0019781
data:
  {"annotated_genes":["SJAG_03950","SJAG_00878"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73120,81468],"is_not":false,"summary":null,"term":"GO:0019781"}]},"cv_name":"molecular_function","definition":"Catalysis of the initiation of the NEDD8 (RUB1) conjugation cascade.","definition_xrefs":["PMID:12646924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like modifier activating enzyme activity","termid":"GO:0008641"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00878":null,"SJAG_03950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"NEDD8 activating enzyme activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:6.2.1.64","GO:0019944"],"synonyms":[{"name":"RUB1 activating enzyme activity","type":"exact"}],"termid":"GO:0019781","terms_by_termid":{"GO:0019781":null}}


id: FYPO:0002981
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is increased during a cellular response to methyl methanesulfonate. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin binding","termid":"FYPO:0002980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"increased chromatin binding during cellular response to methyl methanesulfonate","synonyms":[{"name":"increased chromatin binding during cellular response to MMS","type":"exact"},{"name":"increased chromatin binding during cellular response to methyl methanesulphonate","type":"exact"}],"termid":"FYPO:0002981"}


id: PBO:0004905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex subunit Get1 (predicted)","termid":"PBO:0004905"}


id: PBO:0054668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2074","termid":"PBO:0054668"}


id: MONDO:0032860
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 72","secondary_identifiers":["UMLS:C5231452","DOID:0080765","MEDGEN:1684805","OMIM:618665"],"synonyms":[{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER, AUTOSOMAL RECESSIVE 72","type":"related"},{"name":"MRT72","type":"related"},{"name":"Mental Retardation, Autosomal Recessive 72","type":"related"}],"termid":"MONDO:0032860","xrefs":{"Monarch":{"xref_id":"0032860"}}}


id: GO:0003378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A sphingosine-1-phosphate signaling pathway that modulates the rate, frequency, or extent of the inflammatory response.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of inflammatory response by sphingosine-1-phosphate signaling pathway (obsolete GO:0003378)","synonyms":[{"name":"regulation of inflammatory response by sphingolipid signaling pathway","type":"broad"},{"name":"regulation of inflammatory response by sphingolipid signalling pathway","type":"broad"}],"termid":"GO:0003378"}


id: MONDO:0010813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic beta cell agenesis with neonatal diabetes mellitus","secondary_identifiers":["OMIM:600089","UMLS:C1838655","MEDGEN:325072","MESH:C538111","Orphanet:28455"],"synonyms":[{"name":"diabetes mellitus, insulin-dependent, neonatal","type":"exact"},{"name":"pancreatic beta cell agenesis with neonatal diabetes mellitus","type":"exact"}],"termid":"MONDO:0010813","xrefs":{"Monarch":{"xref_id":"0010813"}}}


id: PBO:0003335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoribonuclease (predicted)","termid":"PBO:0003335"}


id: _global:existence_starts_and_ends_during
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"x exists during y if and only if: 1) the time point at which x begins to exist is after or equal to the time point at which y begins and 2) the time point at which x ceases to exist is before or equal to the point at which y ends. Formally: x existence starts and ends during y iff α(x) >= α(y) & α(x) <= ω(y) & ω(x) <= ω(y) & ω(x) >= α(y)","direct_ancestors":[{"relation_name":"is_a","term_name":"existence_ends_during","termid":"_global:existence_ends_during"},{"relation_name":"is_a","term_name":"existence_starts_during","termid":"_global:existence_starts_during"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_starts_and_ends_during","secondary_identifiers":["RO:0002491"],"synonyms":[{"name":"exists during","type":"exact"}],"termid":"_global:existence_starts_and_ends_during"}


id: PBO:0083953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma-tubulin; involved in nucleating microtubules from both the cytoplasmic and nuclear faces of the spindle pole body; protein abundance increases in response to DNA replication stress; null mutation is complemented by human TUBG1","termid":"PBO:0083953"}


id: GO:1990009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a retinal cell.","definition_xrefs":["PMID:15558487","PMID:24664675","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal cell apoptotic process","secondary_identifiers":["GO:0046674"],"synonyms":[{"name":"induction of retinal programmed cell death","type":"related"}],"termid":"GO:1990009"}


id: MONDO:0011950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"infantile-onset autosomal recessive nonprogressive cerebellar ataxia","secondary_identifiers":["UMLS:C1842676","MESH:C537312","DOID:0111617","GARD:4954","Orphanet:284332","MEDGEN:334220","OMIM:608029"],"synonyms":[{"name":"Norwegian infantile onset ataxia","type":"related"},{"name":"SCAR6","type":"exact"},{"name":"autosomal recessive spinocerebellar ataxia type 6","type":"exact"},{"name":"cerebellar ataxia infantile nonprogressive autosomal recessive","type":"related"},{"name":"cerebellar ataxia, infantile nonprogressive, autosomal recessive","type":"related"},{"name":"spinocerebellar ataxia autosomal recessive 6","type":"related"},{"name":"spinocerebellar ataxia, autosomal recessive 6","type":"related"}],"termid":"MONDO:0011950","xrefs":{"Monarch":{"xref_id":"0011950"}}}


id: GO:0048094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of a pattern of pigment in males.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex-specific pigmentation","termid":"GO:0048071"},{"relation_name":"part_of","term_name":"male sex differentiation","termid":"GO:0046661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male pigmentation","termid":"GO:0048094"}


id: PBO:0119951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear 5' to 3' DNA helicase Pif1/Pfh1","termid":"PBO:0119951"}


id: PBO:0085825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expression suppresses a secretory pathway mutation in E. coli; has similarity to the mammalian RAMP4 protein involved in secretion","termid":"PBO:0085825"}


id: PBO:0031777
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_endocytosis_during_vegetative_growth","termid":"PBO:0031777"}


id: PBO:0091927
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gcnFour Induction Like","termid":"PBO:0091927"}


id: MONDO:0011591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract that has material basis in variation in the region 9q13-q22.","definition_xrefs":["PMID:11179024","DOID:0110246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 26 multiple types","secondary_identifiers":["OMIM:605749","MEDGEN:381316","MESH:C565298","UMLS:C1854003"],"synonyms":[{"name":"CTRCT26","type":"exact"},{"name":"cataract 26, multiple types","type":"related"},{"name":"cataract, autosomal recessive, early-onset, pulverulent","type":"related"}],"termid":"MONDO:0011591","xrefs":{"Monarch":{"xref_id":"0011591"}}}


id: GO:0047563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxybenzoate + AH(2) + O2 = 2,3-dihydroxybenzoate + A + H2O.","definition_xrefs":["RHEA:14193","EC:1.14.99.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-hydroxybenzoate 2-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R01508","MetaCyc:3-HYDROXYBENZOATE-2-MONOOXYGENASE-RXN"],"synonyms":[{"name":"3-HBA-2-hydroxylase activity","type":"related"},{"name":"3-hydroxybenzoate 2-hydroxylase activity","type":"exact"},{"name":"3-hydroxybenzoate,hydrogen-donor:oxygen oxidoreductase (2-hydroxylating)","type":"related"}],"termid":"GO:0047563"}


id: GO:0008359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process in which bicoid mRNA is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular mRNA localization","termid":"GO:1904580"},{"relation_name":"regulates","term_name":"bicoid mRNA localization","termid":"GO:0045450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of bicoid mRNA localization","synonyms":[{"name":"regulation of bicoid mRNA localisation","type":"exact"}],"termid":"GO:0008359"}


id: PBO:0004085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA element modulatory factor homolog (predicted)","termid":"PBO:0004085"}


id: PBO:0027776
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_2-bromo-2-(((4-methylphenyl)sulfonyl)methyl)-1-indanone","termid":"PBO:0027776"}


id: PBO:0047336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibulin 2","termid":"PBO:0047336"}


id: PBO:0052422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIRREL3 antisense RNA 1","termid":"PBO:0052422"}


id: PBO:0057653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1245b","termid":"PBO:0057653"}


id: PBO:0081279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF45 antisense RNA 1","termid":"PBO:0081279"}


id: PBO:0060150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translational release factor 1 like pseudogene 1","termid":"PBO:0060150"}


id: PBO:0034282
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_starts_with","termid":"PBO:0034282"}


id: PBO:0062505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily G member 7 pseudogene","termid":"PBO:0062505"}


id: GO:0002514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involving any mechanism for tolerance induction in B cells.","definition_xrefs":["GOC:jal","ISBN:0781735149","PMID:16460922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell tolerance induction","synonyms":[{"name":"B lymphocyte tolerance induction","type":"exact"},{"name":"B-cell tolerance induction","type":"exact"},{"name":"B-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002514"}


id: PBO:0071441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 47","termid":"PBO:0071441"}


id: PBO:0000310
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiotically Upregulated Gene","termid":"PBO:0000310"}


id: GO:1900188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion involved in single-species biofilm formation.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-substrate adhesion","termid":"GO:0010812"},{"relation_name":"is_a","term_name":"regulation of cell adhesion involved in single-species biofilm formation","termid":"GO:1900187"},{"relation_name":"negatively_regulates","term_name":"cell adhesion involved in single-species biofilm formation","termid":"GO:0043709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of cell adhesion involved in single-species biofilm formation","synonyms":[{"name":"down regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"down regulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"down-regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"down-regulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"downregulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"downregulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"inhibition of cell adhesion during single-species biofilm formation","type":"related"},{"name":"inhibition of cell adhesion involved in single-species biofilm formation","type":"narrow"},{"name":"negative regulation of cell adhesion during single-species biofilm formation","type":"related"}],"termid":"GO:1900188"}


id: PBO:0042679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEBPA divergent transcript","termid":"PBO:0042679"}


id: PBO:0064718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 54","termid":"PBO:0064718"}


id: PBO:0064617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 5 homeobox 1 pseudogene 7","termid":"PBO:0064617"}


id: MONDO:0002725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete diffuse cutaneous mastocytosis (obsolete MONDO:0002725)","termid":"MONDO:0002725","xrefs":{"Monarch":{"xref_id":"0002725"}}}


id: FYPO:0007741
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin along the length of genes that can be transcribed by RNA polymerase II is abnormal during metaphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:33771877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein distribution along RNA polymerase II-transcribed genes","termid":"FYPO:0006020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein distribution along RNA polymerase II-transcribed genes during mitotic metaphase","synonyms":[{"name":"abnormal protein distribution across RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"},{"name":"abnormal protein distribution along RNA polymerase II-regulated genes during mitotic metaphase","type":"exact"},{"name":"abnormal protein distribution along RNA polymerase II-transcribed genes during metaphase during vegetative growth","type":"exact"},{"name":"abnormal protein distribution along RNA polymerase II-transcribed genes during metaphase of mitotic cell cycle","type":"exact"},{"name":"abnormal protein distribution in chromatin along RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"},{"name":"abnormal protein localization to chromatin along RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007741"}


id: FYPO:0001935
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of proton-transporting ATP synthase activity by a rotational mechanism is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal transmembrane transporter activity","termid":"FYPO:0002116"},{"relation_name":"is_a","term_name":"abnormal proton transport","termid":"FYPO:0005971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0000138","FYPO:0000707","FYPO:0002114"],"is_obsolete":false,"name":"abnormal proton-transporting ATP synthase activity, rotational mechanism","synonyms":[{"name":"abnormal hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"abnormal mitochondrial proton-transporting ATP synthase activity","type":"narrow"},{"name":"abnormal proton-transporting ATP synthase activity","type":"related"}],"termid":"FYPO:0001935"}


id: MONDO:0012846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"generalized epilepsy with febrile seizures plus","termid":"MONDO:0018214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"generalized epilepsy with febrile seizures plus, type 6","secondary_identifiers":["OMIM:612279","GARD:18663","MEDGEN:394198","MESH:C567371","UMLS:C2677078","DOID:0111300"],"synonyms":[{"name":"GEFSP6","type":"exact"},{"name":"Gefs+, type 6","type":"related"},{"name":"generalized epilepsy with febrile seizures plus, type 6","type":"exact"}],"termid":"MONDO:0012846","xrefs":{"Monarch":{"xref_id":"0012846"}}}


id: PBO:0052405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 5B","termid":"PBO:0052405"}


id: PBO:0110367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPS8 signaling adaptor L1","termid":"PBO:0110367"}


id: PBO:0052841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 3-1","termid":"PBO:0052841"}


id: PBO:0025460
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyglutaric aciduria","termid":"PBO:0025460"}


id: PBO:0036108
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_transport_along_microtubule_to_cell_tip_during_vegetative_growth","termid":"PBO:0036108"}


id: PBO:0058104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4319","termid":"PBO:0058104"}


id: PBO:0038572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABR antisense RNA 1","termid":"PBO:0038572"}


id: PBO:0028074
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_arrest_with_cut","termid":"PBO:0028074"}


id: PBO:0040926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 1","termid":"PBO:0040926"}


id: MONDO:0010944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import-stimulating factor","secondary_identifiers":["MEDGEN:331468","OMIM:600851","UMLS:C1833246"],"synonyms":[{"name":"MSF","type":"related"},{"name":"mitochondrial import-stimulating factor","type":"exact"}],"termid":"MONDO:0010944","xrefs":{"Monarch":{"xref_id":"0010944"}}}


id: MONDO:0001724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that affects the supraglottic area of the larynx. The vast majority of cases are squamous cell carcinomas.","definition_xrefs":["NCIT:C3545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larynx cancer","termid":"MONDO:0002352"},{"relation_name":"is_a","term_name":"supraglottis neoplasm","termid":"MONDO:0004427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"supraglottis cancer","secondary_identifiers":["SCTID:187842004","ICD10CM:C32.1","ICD9:161.1","UMLS:C0153484","DOID:13476","MEDGEN:57561"],"synonyms":[{"name":"Ca larynx - supraglottis","type":"exact"},{"name":"cancer of supraglottic part of larynx","type":"exact"},{"name":"malignant neoplasm of extrinsic larynx","type":"exact"},{"name":"malignant neoplasm of supraglottic part of larynx","type":"exact"},{"name":"malignant neoplasm of supraglottis","type":"exact"},{"name":"malignant neoplasm of the supraglottis","type":"exact"},{"name":"malignant supraglottic neoplasm","type":"exact"},{"name":"malignant supraglottic part of larynx neoplasm","type":"exact"},{"name":"malignant supraglottic tumor","type":"exact"},{"name":"malignant supraglottic tumour","type":"exact"},{"name":"malignant supraglottis neoplasm","type":"exact"},{"name":"malignant supraglottis tumor","type":"exact"},{"name":"malignant supraglottis tumour","type":"exact"},{"name":"malignant tumor of supraglottis","type":"exact"},{"name":"malignant tumor of the supraglottis","type":"exact"},{"name":"malignant tumour of supraglottis","type":"exact"},{"name":"malignant tumour of the supraglottis","type":"exact"},{"name":"supraglottic part of larynx cancer","type":"exact"}],"termid":"MONDO:0001724","xrefs":{"Monarch":{"xref_id":"0001724"}}}


id: MONDO:1010495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ventricular septal defect that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septal defect, non-human animal","termid":"MONDO:1010022"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular septal defect, rabbit","secondary_identifiers":["OMIA:001041-9986"],"termid":"MONDO:1010495","xrefs":{"Monarch":{"xref_id":"1010495"}}}


id: GO:0015825
data:
  {"annotated_genes":["SJAG_04588","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66766],"is_not":false,"summary":null,"term":"GO:0015825"},{"annotations":[105768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"}]},"cv_name":"biological_process","definition":"The directed movement of L-serine, the L-enantiomer of 2-amino-3-hydroxypropanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai","GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid transport","termid":"GO:0015807"},{"relation_name":"is_a","term_name":"serine transport","termid":"GO:0032329"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_04588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"L-serine transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0090479"],"synonyms":[{"name":"L-serine import","type":"narrow"}],"termid":"GO:0015825","terms_by_termid":{"GO:0015825":null,"GO:0090516":null}}


id: PBO:0055898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 19","termid":"PBO:0055898"}


id: PBO:0049347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 5","termid":"PBO:0049347"}


id: MONDO:0000707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A colitis which can occur as a complication of ileostomy or colostomy.","direct_ancestors":[{"relation_name":"is_a","term_name":"colitis","termid":"MONDO:0005292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"diversion colitis","secondary_identifiers":["icd11.foundation:553304993","UMLS:C0267532","DOID:0060187","ICD9:558","ICD9:558.9","MEDGEN:540758","SCTID:51290000"],"termid":"MONDO:0000707","xrefs":{"Monarch":{"xref_id":"0000707"}}}


id: PBO:0027699
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_rDNA_separation","termid":"PBO:0027699"}


id: GO:0036082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when extracellular phenylacetaldehyde has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:19135896","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"extracellular phenylacetaldehyde-gated monoatomic ion channel activity","synonyms":[{"name":"extracellular phenylacetaldehyde-gated ion channel activity","type":"broad"},{"name":"ionotropic phenylacetaldehyde receptor activity","type":"related"}],"termid":"GO:0036082"}


id: GO:1903306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of regulated secretory pathway.","definition_xrefs":["PMID:12526776","GOC:pad","GOC:PARL","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of exocytosis","termid":"GO:0045920"},{"relation_name":"is_a","term_name":"regulation of regulated secretory pathway","termid":"GO:1903305"},{"relation_name":"negatively_regulates","term_name":"regulated exocytosis","termid":"GO:0045055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"negative regulation of regulated secretory pathway","synonyms":[{"name":"down regulation of regulated secretory pathway","type":"exact"},{"name":"down-regulation of regulated secretory pathway","type":"exact"},{"name":"downregulation of regulated secretory pathway","type":"exact"},{"name":"inhibition of regulated secretory pathway","type":"narrow"}],"termid":"GO:1903306"}


id: MONDO:0011515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete papillary renal cell carcinoma (obsolete MONDO:0011515)","termid":"MONDO:0011515","xrefs":{"Monarch":{"xref_id":"0011515"}}}


id: PBO:0042336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD68 molecule","termid":"PBO:0042336"}


id: PBO:0086157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for processing of 20S pre-rRNA in the cytoplasm; associates with pre-40S ribosomal particles; inhibits the premature association of 60S subunits with assembling 40S subunits in the cytoplasm; similar to Bms1p; relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0086157"}


id: MONDO:1011682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anal gland disease, non-human animal","secondary_identifiers":["OMIA:002523"],"termid":"MONDO:1011682","xrefs":{"Monarch":{"xref_id":"1011682"}}}


id: MONDO:0002197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, benign neoplasm that arises from the vulva It is characterized by the presence of clusters of small glands lined by mucinous epithelial cells. Bartholin duct structures are not present.","definition_xrefs":["NCIT:C40301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vestibular gland benign neoplasm","termid":"MONDO:0000626"},{"relation_name":"is_a","term_name":"vulvar glandular neoplasm","termid":"MONDO:0002198"},{"relation_name":"is_a","term_name":"paraurethral gland neoplasm","termid":"MONDO:0002219"},{"relation_name":"is_a","term_name":"benign urethral neoplasm","termid":"MONDO:0004177"},{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minor vestibular glands adenoma","secondary_identifiers":["UMLS:C1510791","DOID:2075","MEDGEN:267644"],"synonyms":[{"name":"adenoma of minor vestibular glands","type":"exact"},{"name":"minor vestibular gland adenoma","type":"exact"}],"termid":"MONDO:0002197","xrefs":{"Monarch":{"xref_id":"0002197"}}}


id: MONDO:0013483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obesity, hyperphagia, and developmental delay","secondary_identifiers":["OMIM:613886","UMLS:C3151303","MEDGEN:462653","MESH:C563938"],"synonyms":[{"name":"OBHD","type":"related"},{"name":"obesity, hyperphagia, and developmental delay","type":"exact"}],"termid":"MONDO:0013483","xrefs":{"Monarch":{"xref_id":"0013483"}}}


id: GO:0035496
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + lipopolysaccharide = UDP + 1,5 alpha-D-galactosyl-lipopolysaccharide.","definition_xrefs":["PMID:11304545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"lipopolysaccharide-1,5-galactosyltransferase activity","synonyms":[{"name":"LPS-1,5-galactosyltransferase activity","type":"exact"},{"name":"UDP-D-galactose:(glucosyl)lipopolysaccharide-1,5-D-galactosyltransferase","type":"exact"}],"termid":"GO:0035496"}


id: MONDO:0015005
data:
  {"annotated_genes":["SJAG_05230"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88875],"is_not":false,"summary":null,"term":"MONDO:0015005"}]},"cv_name":"mondo","definition":"A pyridoxine-dependent epilepsy that has material basis in homozygous or compound heterozygous mutation in the PLPBP gene on chromosome 8p11.23.","definition_xrefs":["DOID:0080769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxine-dependent epilepsy","termid":"MONDO:0009945"},{"relation_name":"is_a","term_name":"epilepsy, early-onset","termid":"MONDO:0957599"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0005066"],"is_obsolete":false,"name":"epilepsy, early-onset, vitamin B6-dependent","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:934599","UMLS:C4310632","OMIM:617290"],"synonyms":[{"name":"EPVB6D","type":"exact"},{"name":"epilepsy, early-onset, vitamin B6-dependent","type":"exact"},{"name":"epilepsy, early-onset, vitamin B6-dependent; EPVB6D","type":"exact"}],"termid":"MONDO:0015005","terms_by_termid":{"MONDO:0015005":null},"xrefs":{"Monarch":{"xref_id":"0015005"}}}


id: MONDO:0013111
data:
  {"annotated_genes":["SJAG_00358"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87356],"is_not":false,"summary":null,"term":"MONDO:0013111"}]},"cv_name":"mondo","definition":"Acute infantile liver failure due to mtDNA-encoded proteins synthesis defect is a very rare mitochondrial respiratory chain deficiency described in fewer than 10 infants, primarily of middle Eastern descent, and characterized clinically by transient but life-threatening liver failure with elevated liver enzymes, jaundice, vomiting, coagulopathy, hyperbilirubinemia, and lactic acidemia.","definition_xrefs":["Orphanet:217371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infantile liver failure","termid":"MONDO:0000023"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"acute liver failure","termid":"MONDO:0019542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00358":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0005066","MONDO:0004335","MONDO:0004069"],"is_obsolete":false,"name":"acute infantile liver failure due to synthesis defect of mtDNA-encoded proteins","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10593","OMIM:613070","UMLS:C3278664","MEDGEN:480294","DOID:0080778"],"synonyms":[{"name":"LFIT","type":"exact"},{"name":"TRMU infantile liver failure","type":"exact"},{"name":"acute infantile liver failure","type":"broad"},{"name":"acute infantile liver failure due to synthesis defect of mitochondrial DNA-encoded proteins","type":"exact"},{"name":"acute infantile liver failure due to synthesis defect of mtDNA-encoded proteins","type":"exact"},{"name":"infantile liver failure caused by mutation in TRMU","type":"exact"},{"name":"liver failure, infantile, transient","type":"exact"},{"name":"liver failure, transient infantile","type":"exact"},{"name":"transient infantile liver failure","type":"exact"}],"termid":"MONDO:0013111","terms_by_termid":{"MONDO:0013111":null},"xrefs":{"Monarch":{"xref_id":"0013111"}}}


id: GO:0141174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont inhibits or disrupts anti-inflammatory cytokine signaling in the host organism, either by disruption of production, sequesteration, or destruction of at least one component of the signaling pathway.  Anti-inflammatory cytokines include: interleukin (IL)-1, IL-4, IL-6, IL-10, IL-11, and IL-13. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:29720526","PMID:19168731","PMID:32754056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host receptor-mediated signal transduction","termid":"GO:0075109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host anti-inflammatory cytokine signaling","synonyms":[{"name":"negative regulation by symbiont of host anti-inflammatory cytokine production","type":"exact"},{"name":"suppression by symbiont of host anti-inflammatory cytokine production","type":"exact"},{"name":"suppression by symbiont of host anti-inflammatory cytokine secretion","type":"related"},{"name":"symbiont-mediated degradation of host anti-inflammatory cytokine","type":"narrow"},{"name":"symbiont-mediated sequestering of host anti-inflammatory cytokine","type":"related"},{"name":"symbiont-mediated suppression of host anti-inflammatory cytokine production","type":"related"}],"termid":"GO:0141174"}


id: MONDO:0001311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Chandler syndrome (obsolete MONDO:0001311)","termid":"MONDO:0001311","xrefs":{"Monarch":{"xref_id":"0001311"}}}


id: PBO:0085452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Possible rhomboid protease; has similarity to eukaryotic rhomboid proteases including Pcp1p","termid":"PBO:0085452"}


id: PBO:0086763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; S288C contains an in-frame stop codon between ORFs YLR030W and YLR031W; YLR031W has a paralog, YMR124W, that arose from the whole genome duplication","termid":"PBO:0086763"}


id: PBO:0012538
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_has_agent","termid":"PBO:0012538"}


id: PBO:0074233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC47A1 pseudogene 2","termid":"PBO:0074233"}


id: GO:0009207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine ribonucleoside triphosphate, a compound consisting of a purine base linked to a ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside triphosphate catabolic process","termid":"GO:0009146"},{"relation_name":"is_a","term_name":"ribonucleoside triphosphate catabolic process","termid":"GO:0009203"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate metabolic process","termid":"GO:0009205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine ribonucleoside triphosphate catabolic process","synonyms":[{"name":"purine ribonucleoside triphosphate breakdown","type":"exact"},{"name":"purine ribonucleoside triphosphate catabolism","type":"exact"},{"name":"purine ribonucleoside triphosphate degradation","type":"exact"}],"termid":"GO:0009207"}


id: PBO:0061627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 10","termid":"PBO:0061627"}


id: PATO:0002307
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A triangular quality inhering in a bearer by virtue of the bearer's having two sides have the same length.","definition_xrefs":["PATOC:JB"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triangular","termid":"PATO:0001875"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isosceles triangular","termid":"PATO:0002307"}


id: PBO:0003549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon-like protein Rtn1","termid":"PBO:0003549"}


id: MOD:00059
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to N-acetyl-L-proline.","definition_xrefs":["RESID:AA0050","PubMed:2928307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-proline","synonyms":[{"name":"(2S)-1-acetyl-2-pyrrolidinecarboxylic acid","type":"exact"},{"name":"1-acetylproline","type":"exact"},{"name":"MOD_RES N-acetylproline","type":"exact"},{"name":"N-acetyl-L-proline","type":"exact"},{"name":"N-acetylated L-proline","type":"exact"},{"name":"N-acetylproline","type":"exact"},{"name":"NAcPro","type":"exact"},{"name":"acetylproline","type":"exact"}],"termid":"MOD:00059"}


id: PBO:0036211
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-two_Mei2_nuclear_dots_present_in_cell","termid":"PBO:0036211"}


id: GO:0085032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts an NF-kappaB-mediated signaling cascade in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host signal transduction pathway","termid":"GO:0052027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host NF-kappaB cascade","synonyms":[{"name":"modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade","type":"related"},{"name":"modulation by symbiont of host NF-kappaB-mediated signal transduction pathway","type":"exact"},{"name":"perturbation of host I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"perturbation of host canonical NF-kappaB cascade","type":"related"},{"name":"symbiont-mediated perturbation of host canonical NF-kappaB cascade","type":"related"}],"termid":"GO:0085032"}


id: PBO:0032696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_mitotic_spindle_elongation_during_anaphase_B","termid":"PBO:0032696"}


id: MONDO:0030747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"junctional epidermolysis bullosa","termid":"MONDO:0017612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa, junctional 2B, severe","secondary_identifiers":["UMLS:C5676937","MEDGEN:1805467","OMIM:619784"],"synonyms":[{"name":"JEB2B","type":"exact"},{"name":"epidermolysis bullosa, junctional 2B, generalised severe","type":"exact"},{"name":"epidermolysis bullosa, junctional 2B, generalized severe","type":"exact"},{"name":"epidermolysis bullosa, junctional 2B, herlitz IIA","type":"exact"},{"name":"epidermolysis bullosa, junctional 2B, severe","type":"exact"}],"termid":"MONDO:0030747","xrefs":{"Monarch":{"xref_id":"0030747"}}}


id: MONDO:0003770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that arises from the meninges of the thoracic region of the spinal cord.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraspinal meningioma","termid":"MONDO:0001279"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thoracic spinal canal and spinal cord meningioma","secondary_identifiers":["NCIT:C5297","DOID:6103","MEDGEN:234424","UMLS:C1336738"],"synonyms":[{"name":"meningioma of the thoracic spinal canal and spinal cord","type":"exact"},{"name":"meningioma of thoracic spinal canal and spinal cord","type":"exact"},{"name":"thoracic intraspinal meningioma","type":"exact"}],"termid":"MONDO:0003770","xrefs":{"Monarch":{"xref_id":"0003770"}}}


id: PR:O74537
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC74.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C74.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC74.04","synonyms":[{"name":"Spom972h-SPCC74.04","type":"exact"}],"termid":"PR:O74537"}


id: PBO:0036243
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli PyrB","termid":"PBO:0036243"}


id: GO:0005177
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A class of ligands for neurexins.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete neuroligin (obsolete GO:0005177)","synonyms":[{"name":"neuroligin","type":"exact"}],"termid":"GO:0005177"}


id: PBO:0042320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD40 molecule","termid":"PBO:0042320"}


id: GO:0048578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases long-day photoperiodism, where the response associated with the photoperiodism is flowering. Flowering is defined by the switch from the vegetative to the reproductive phase.","definition_xrefs":["ISBN:0582015952","ISBN:0709408862","ISBN:0697037754","GOC:pj","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of post-embryonic development","termid":"GO:0048582"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of long-day photoperiodism, flowering","termid":"GO:0048586"},{"relation_name":"positively_regulates","term_name":"long-day photoperiodism, flowering","termid":"GO:0048574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of long-day photoperiodism, flowering","synonyms":[{"name":"activation of long-day photoperiodism, flowering","type":"narrow"},{"name":"stimulation of long-day photoperiodism, flowering","type":"narrow"},{"name":"up regulation of long-day photoperiodism, flowering","type":"exact"},{"name":"up-regulation of long-day photoperiodism, flowering","type":"exact"},{"name":"upregulation of long-day photoperiodism, flowering","type":"exact"}],"termid":"GO:0048578"}


id: GO:0047561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxyanthranilate + O2 = 6-imino-5-oxocyclohexa-1,3-dienecarboxylate + H2O2.","definition_xrefs":["EC:1.10.3.5","RHEA:17245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-hydroxyanthranilate oxidase activity","secondary_identifiers":["KEGG_REACTION:R02666","MetaCyc:3-HYDROXYANTHRANILATE-OXIDASE-RXN"],"synonyms":[{"name":"3-hydroxyanthranilate:oxygen oxidoreductase activity","type":"related"},{"name":"3-hydroxyanthranilic acid oxidase activity","type":"related"}],"termid":"GO:0047561"}


id: GO:1904392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ciliary neurotrophic factor stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:16914133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"response to ciliary neurotrophic factor","termid":"GO:1904391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ciliary neurotrophic factor","termid":"GO:1904392"}


id: PBO:0074533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA G1","termid":"PBO:0074533"}


id: PBO:0005200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"12 small nucleolar RNA/small nucleolar RNA snR99","termid":"PBO:0005200"}


id: GO:0150013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the process in which the anatomical structures of a neuron projection are generated and organized into branches.","definition_xrefs":["GOC:aruk","PMID:17114044","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of neuron projection arborization","termid":"GO:0150011"},{"relation_name":"negatively_regulates","term_name":"neuron projection arborization","termid":"GO:0140058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron projection arborization","synonyms":[{"name":"negative regulation of neurite arborization","type":"exact"},{"name":"negative regulation of neurite branching","type":"exact"},{"name":"negative regulation of neuron projection branching","type":"exact"}],"termid":"GO:0150013"}


id: PBO:0038966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADNP antisense RNA 1","termid":"PBO:0038966"}


id: PBO:0079106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSC22D1 antisense RNA 1","termid":"PBO:0079106"}


id: GO:0009798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of a pattern along a line or around a point.","definition_xrefs":["GOC:dph","GOC:isa_complete","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axis specification","synonyms":[{"name":"axis determination","type":"related"}],"termid":"GO:0009798"}


id: PBO:0084289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral plasma membrane protein; required for axial budding in haploid cells; localizes to the incipient bud site and bud neck; glycosylated by Pmt4p; potential Cdc28p substrate","termid":"PBO:0084289"}


id: MOD:00327
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to a 3-hydroxy-L-tryptophan.","definition_xrefs":["PubMed:11457355","ChEBI:141794","RESID:AA0322","PubMed:10024453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated tryptophan","termid":"MOD:01622"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-L-tryptophan","synonyms":[{"name":"(2S,3S)-2-amino-3-hydroxy-3-(1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"3-hydroxy-L-tryptophan","type":"exact"},{"name":"3-hydroxylated L-tryptophan","type":"exact"},{"name":"3-hydroxytryptophan","type":"exact"},{"name":"3HyTrp","type":"exact"},{"name":"MOD_RES 3-hydroxytryptophan","type":"exact"},{"name":"beta-hydroxytryptophan","type":"exact"}],"termid":"MOD:00327"}


id: GO:0002880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a chronic inflammatory response to a non-antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chronic inflammatory response","termid":"GO:0002676"},{"relation_name":"regulates","term_name":"chronic inflammatory response to non-antigenic stimulus","termid":"GO:0002545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chronic inflammatory response to non-antigenic stimulus","termid":"GO:0002880"}


id: PBO:0062832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odd-skipped related transciption factor 2","termid":"PBO:0062832"}


id: PR:P0CS85
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBCPT2R1.03 gene.","definition_xrefs":["UniProtKB:P0CS85","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein CPT2R1.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBCPT2R1.03","synonyms":[{"name":"Spom972h-SPBCPT2R1.03","type":"exact"}],"termid":"PR:P0CS85"}


id: PBO:0043277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 3 member B","termid":"PBO:0043277"}


id: PBO:0086363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aldose 1-epimerase","termid":"PBO:0086363"}


id: PBO:0048081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 2","termid":"PBO:0048081"}


id: GO:0019261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1,4-dichlorobenzene (p-dichlorobenzene or paramoth), a derivative of benzene with two chlorine atoms attached at opposite positions on the ring.","definition_xrefs":["PMID:9148781","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1,4-dichlorobenzene catabolic process","secondary_identifiers":["UM-BBD_pathwayID:dcz","MetaCyc:14DICHLORBENZDEG-PWY"],"synonyms":[{"name":"1,4-dichlorobenzene breakdown","type":"exact"},{"name":"1,4-dichlorobenzene catabolism","type":"exact"},{"name":"1,4-dichlorobenzene degradation","type":"exact"}],"termid":"GO:0019261"}


id: PBO:0116616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3142","termid":"PBO:0116616"}


id: SO:0001343
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N2_7_2prirme_O_trimethylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2_7_2prirme_O_trimethylguanosine","secondary_identifiers":["RNAMOD:106"],"synonyms":[{"name":"N2 7 2prirme O trimethylguanosine","type":"exact"},{"name":"N2,7,2'-O-trimethylguanosine","type":"exact"},{"name":"m2,7Gm","type":"exact"}],"termid":"SO:0001343"}


id: PR:000050455
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein rnc1 (Schizosaccharomyces pombe) that has been phosphorylated at positions equivalent to Thr-45, Thr-50, Thr-171, Thr-177, Ser-278, and Ser-286 of the amino acid sequence represented by UniProtKB:O74919. Example: UniProtKB:O74919, Thr-45/Thr-50/Thr-171/Thr-177, MOD:00047|Ser-278/Ser-286, MOD:00046.","definition_xrefs":["PMID:31911490","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-binding protein rnc1 (Schizosaccharomyces pombe)","termid":"PR:000050452"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rnc1/Phos(T45,T50,T171,T177,S278,S286)","pombase_gene_id":"SPCC757.09c","synonyms":[{"name":"PomBase_original_PRO_term_name: RNA-binding protein rnc1 phosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rnc1/Phos:2","type":"exact"},{"name":"UniProtKB:O74919, Thr-45/Thr-50/Thr-171/Thr-177, MOD:00047|Ser-278/Ser-286, MOD:00046","type":"narrow"},{"name":"rnc1/Phos(T45,T50,T171,T177,S278,S286)","type":"exact"}],"termid":"PR:000050455"}


id: PBO:0080322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 86 pseudogene","termid":"PBO:0080322"}


id: GO:0061851
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"That part of the lamellipodium which represents the distal part of the structure.","definition_xrefs":["PMID:22339865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell leading edge","termid":"GO:0031252"},{"relation_name":"part_of","term_name":"lamellipodium","termid":"GO:0030027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"leading edge of lamellipodium","termid":"GO:0061851"}


id: RO:0002209
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of parasitoid of","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitized_by","termid":"RO:0002445"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_parasitoid","termid":"RO:0002209"}


id: MONDO:0012748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the DNAH11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 7","secondary_identifiers":["UMLS:C2678473","OMIM:611884","GARD:15533","DOID:0110605","MEDGEN:394834","MESH:C567504"],"synonyms":[{"name":"CILD7","type":"exact"},{"name":"DNAH11 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 7","type":"related"},{"name":"ciliary dyskinesia, primary, 7, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 7","type":"exact"},{"name":"primary ciliary dyskinesia 7","type":"exact"},{"name":"primary ciliary dyskinesia 7 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in DNAH11","type":"exact"},{"name":"primary ciliary dyskinesia type 7","type":"exact"}],"termid":"MONDO:0012748","xrefs":{"Monarch":{"xref_id":"0012748"}}}


id: PBO:0079663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 11","termid":"PBO:0079663"}


id: GO:0007072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription as the cell leaves M phase. M phase is the part of the mitotic cell cycle during which mitosis and cytokinesis take place.","definition_xrefs":["GOC:isa_complete","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in exit from mitosis (obsolete GO:0007072)","synonyms":[{"name":"activation of transcription on exit from mitosis","type":"narrow"}],"termid":"GO:0007072"}


id: PATO:0001109
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001109 absolute amplitude value (obsolete PATO:0001109)","termid":"PATO:0001109"}


id: MONDO:0002420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorders characterized by recurrent TICS that may interfere with speech and other activities. Tics are sudden, rapid, nonrhythmic, stereotyped motor movements or vocalizations which may be exacerbated by stress and are generally attenuated during absorbing activities. Tic disorders are distinguished from conditions which feature other types of abnormal movements that may accompany another another condition. (From DSM-IV, 1994)","definition_xrefs":["MESH:D013981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specific developmental disorder","termid":"MONDO:0000592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tic disorder","secondary_identifiers":["ICD9:307.2","ICD9:307.20","SCTID:568005","DOID:2769","MEDGEN:853666","UMLS:C2169806"],"termid":"MONDO:0002420","xrefs":{"Monarch":{"xref_id":"0002420"}}}


id: MONDO:0014523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"hereditary ataxia","termid":"MONDO:0100309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juvenile-onset diabetes mellitus-central and peripheral neurodegeneration syndrome","secondary_identifiers":["GARD:17768","Orphanet:445062","UMLS:C4015436","MEDGEN:863873","OMIM:616192"],"synonyms":[{"name":"ACPHD","type":"related"},{"name":"ataxia, combined cerebellar and peripheral, with hearing loss and diabetes mellitus","type":"related"},{"name":"combined cerebellar and peripheral ataxia-hearing loss-diabetes mellitus syndrome","type":"exact"}],"termid":"MONDO:0014523","xrefs":{"Monarch":{"xref_id":"0014523"}}}


id: GO:0099576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates synaptic transmission by regulating a catabolic process occurring at a postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein catabolic process","termid":"GO:0042176"},{"relation_name":"is_a","term_name":"postsynaptic modulation of chemical synaptic transmission","termid":"GO:0099170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0030163","GO:0008150"],"is_obsolete":false,"name":"regulation of protein catabolic process at postsynapse, modulating synaptic transmission","termid":"GO:0099576"}


id: GO:0009967
data:
  {"annotated_genes":["SJAG_04666","SJAG_03705","SJAG_03453","SJAG_04551","SJAG_00082","SJAG_02424","SJAG_05030","SJAG_00143","SJAG_00610","SJAG_03048","SJAG_01199","SJAG_00318","SJAG_03405","SJAG_05184","SJAG_00561","SJAG_01837","SJAG_03903","SJAG_01978","SJAG_04496","SJAG_00209","SJAG_00027","SJAG_02231","SJAG_06588","SJAG_04259","SJAG_00424","SJAG_06621","SJAG_01181","SJAG_06592","SJAG_01587","SJAG_03568","SJAG_03907","SJAG_02183","SJAG_06622","SJAG_03828","SJAG_02486","SJAG_00845","SJAG_00781","SJAG_01805","SJAG_01632","SJAG_02945","SJAG_03969","SJAG_02135","SJAG_01150","SJAG_03089","SJAG_03936","SJAG_00457","SJAG_04776","SJAG_01787","SJAG_03371","SJAG_02605","SJAG_02682","SJAG_04910"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104077,112962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050850"},{"annotations":[69403,89941,91307,92641,94299,119920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903139"},{"annotations":[115782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[118682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"},{"annotations":[114471,119382,110911,120310,110910,97160,110912,110913,110914,110915,110916,113805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900745"},{"annotations":[116624,90003,92721,117592,105635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062038"},{"annotations":[91873,112504,89387,95692,104319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"},{"annotations":[115432,62232,80207,115431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000640"},{"annotations":[70926,74769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032008"},{"annotations":[74294,77164,114853,75762,78215,98003,112520,96204,90172,78554,77675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904263"},{"annotations":[108951,99660,93072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904515"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signal transduction.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"is_a","term_name":"positive regulation of signaling","termid":"GO:0023056"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"positively_regulates","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00082":null,"SJAG_00143":null,"SJAG_00209":null,"SJAG_00318":null,"SJAG_00424":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_00610":null,"SJAG_00781":null,"SJAG_00845":null,"SJAG_01150":null,"SJAG_01181":null,"SJAG_01199":null,"SJAG_01587":null,"SJAG_01632":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01978":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02231":null,"SJAG_02424":null,"SJAG_02486":null,"SJAG_02605":null,"SJAG_02682":null,"SJAG_02945":null,"SJAG_03048":null,"SJAG_03089":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03453":null,"SJAG_03568":null,"SJAG_03705":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03907":null,"SJAG_03936":null,"SJAG_03969":null,"SJAG_04259":null,"SJAG_04496":null,"SJAG_04551":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_04910":null,"SJAG_05030":null,"SJAG_05184":null,"SJAG_06588":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of signal transduction","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0035468"],"synonyms":[{"name":"activation of signal transduction","type":"narrow"},{"name":"positive regulation of signaling pathway","type":"related"},{"name":"positive regulation of signalling pathway","type":"related"},{"name":"stimulation of signal transduction","type":"narrow"},{"name":"up regulation of signal transduction","type":"exact"},{"name":"up-regulation of signal transduction","type":"exact"},{"name":"upregulation of signal transduction","type":"exact"}],"termid":"GO:0009967","terms_by_termid":{"GO:0031031":null,"GO:0032008":null,"GO:0050850":null,"GO:0062038":null,"GO:0090267":null,"GO:1900745":null,"GO:1903139":null,"GO:1904263":null,"GO:1904515":null,"GO:1905326":null,"GO:2000640":null}}


id: GO:1903479
data:
  {"annotated_genes":["SJAG_04498"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79195],"is_not":false,"summary":null,"term":"GO:1903479"}]},"cv_name":"biological_process","definition":"Any actin filament organization that is involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GO_REF:0000060","GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"is_a","term_name":"actomyosin contractile ring assembly actin filament organization","termid":"GO:2000689"},{"relation_name":"part_of","term_name":"mitotic actomyosin contractile ring assembly","termid":"GO:1903475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04498":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0044085","GO:0007010","GO:0000281","GO:0030036"],"is_obsolete":false,"name":"mitotic actomyosin contractile ring assembly actin filament organization","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903479","terms_by_termid":{"GO:1903479":null}}


id: PR:Q9URY9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC869.06c gene.","definition_xrefs":["UniProtKB:Q9URY9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized hemerythrin-like protein C869.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.06c","synonyms":[{"name":"Spom972h-SPAC869.06c","type":"exact"}],"termid":"PR:Q9URY9"}


id: PBO:0076533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 50","termid":"PBO:0076533"}


id: PBO:0079179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 8","termid":"PBO:0079179"}


id: FYPO:0007143
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 5'-deoxyribonuclease (pyrimidine dimer) activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal 5' deoxyribonuclease (pyrimidine dimer) activity","termid":"FYPO:0004028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"increased 5'-deoxyribonuclease (pyrimidine dimer) activity","termid":"FYPO:0007143"}


id: PBO:0043352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLPTM1L pseudogene 1","termid":"PBO:0043352"}


id: PBO:0059031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMP20 antisense RNA 1","termid":"PBO:0059031"}


id: PBO:0047636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 1A","termid":"PBO:0047636"}


id: MONDO:0009415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoglycemia, leucine-induced","secondary_identifiers":["DOID:0112262","MESH:C537150","MEDGEN:82888","OMIM:240800","SCTID:62151007","UMLS:C0271714"],"synonyms":[{"name":"LIH","type":"related"},{"name":"familial infantile hypoglycemia precipitated by leucine","type":"related"},{"name":"hypoglycemia leucine induced","type":"related"},{"name":"hypoglycemia leucine-induced","type":"related"},{"name":"hypoglycemia of infancy, leucine-sensitive","type":"exact"},{"name":"hypoglycemia, leucine-induced","type":"exact"},{"name":"leucine-sensitive hypoglycemia of infancy","type":"related"}],"termid":"MONDO:0009415","xrefs":{"Monarch":{"xref_id":"0009415"}}}


id: FYPO:0006191
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased, and some of the protein is present in the cytoplasm instead, during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasm","termid":"FYPO:0004056"},{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during mitosis","termid":"FYPO:0005672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasm during mitosis","synonyms":[{"name":"decreased protein localisation to nucleus, with protein mislocalised to cytoplasm during mitosis","type":"exact"},{"name":"decreased protein localization in nucleus, with protein mislocalized to cytoplasm during mitosis","type":"exact"},{"name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasm, during mitosis during vegetative growth","type":"exact"},{"name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasm, during mitotic nuclear division","type":"exact"},{"name":"reduced protein localization to nucleus, with protein mislocalized to cytoplasm during mitosis","type":"exact"}],"termid":"FYPO:0006191"}


id: MONDO:0011992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 25 (SPG25) is a rare, complex type of hereditary spastic paraplegia characterized by adult-onset spastic paraplegia associated with spinal pain that radiates to the upper or lower limbs and is related to disk herniation (with minor spondylosis), as well as mild sensorimotor neuropathy. The SPG25 phenotype has been mapped to a locus on chromosome 6q23-q24.1.","definition_xrefs":["Orphanet:101005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 25","secondary_identifiers":["SCTID:732933009","MEDGEN:424835","MESH:C536861","UMLS:C2936860","GARD:9582","DOID:0110776","OMIM:608220"],"synonyms":[{"name":"Disc herniation with spastic paraplegia, autosomal recessive","type":"related"},{"name":"SPG25","type":"exact"},{"name":"autosomal recessive spastic paraplegia 25","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 25","type":"exact"},{"name":"autosomal recessive spastic paraplegia-disc herniation syndrome","type":"exact"},{"name":"hereditary spastic paraplegia type 25","type":"exact"},{"name":"spastic paraplegia 25","type":"related"},{"name":"spastic paraplegia 25, autosomal recessive","type":"related"},{"name":"spinal disc herniation with autosomal recessive spastic paraplegia","type":"related"},{"name":"spinal disk herniation with autosomal recessive spastic paraplegia","type":"related"}],"termid":"MONDO:0011992","xrefs":{"Monarch":{"xref_id":"0011992"}}}


id: PBO:0112808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gocam_id","termid":"PBO:0112808"}


id: FYPO:0004912
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phytochelatin measured in the vacuole is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phytochelatin absent from cell","termid":"FYPO:0002722"},{"relation_name":"is_a","term_name":"decreased vacuolar phytochelatin level","termid":"FYPO:0004369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"phytochelatin absent from vacuole","synonyms":[{"name":"cadystin absent from vacuole","type":"exact"},{"name":"phytochelatin absent from vacuole during mitotic cell cycle","type":"related"},{"name":"phytochelatin absent from vacuole during vegetative growth","type":"exact"}],"termid":"FYPO:0004912"}


id: GO:1903338
data:
  {"annotated_genes":["SJAG_04522","SJAG_03704","SJAG_01255","SJAG_00163","SJAG_04551","SJAG_00661","SJAG_04668","SJAG_01181","SJAG_04666","SJAG_00424","SJAG_04462","SJAG_03655","SJAG_02278","SJAG_04659","SJAG_02258","SJAG_01787","SJAG_03705","SJAG_00610","SJAG_04771","SJAG_02684"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75909,109573,110413,112082],"is_not":false,"summary":null,"term":"GO:1903338"},{"annotations":[104078,112963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903340"},{"annotations":[89369,94302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[107867,119921,69405,107293,94286,120054,92643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"},{"annotations":[104782,94308,96839,91309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"},{"annotations":[102105,67913,104081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032995"},{"annotations":[112964,73303,89452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060237"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell wall organization or biogenesis.","definition_xrefs":["GOC:vw","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell wall organization or biogenesis","termid":"GO:0071554"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00163":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_01181":null,"SJAG_01255":null,"SJAG_01787":null,"SJAG_02258":null,"SJAG_02278":null,"SJAG_02684":null,"SJAG_03655":null,"SJAG_03704":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04522":null,"SJAG_04551":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"regulation of cell wall organization or biogenesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"regulation of cell wall organisation or biogenesis","type":"exact"},{"name":"regulation of cell wall organization or biogenesis at cellular level","type":"exact"},{"name":"regulation of cellular cell wall organisation or biogenesis","type":"exact"},{"name":"regulation of cellular cell wall organization or biogenesis","type":"exact"}],"termid":"GO:1903338","terms_by_termid":{"GO:0032995":null,"GO:0060237":null,"GO:0070610":null,"GO:0090334":null,"GO:0140748":null,"GO:1903338":null,"GO:1903340":null}}


id: PBO:0061670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 50 pseudogene 3","termid":"PBO:0061670"}


id: MONDO:0030677
data:
  {"annotated_genes":["SJAG_00637"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88963],"is_not":false,"summary":null,"term":"MONDO:0030677"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"},{"relation_name":"is_a","term_name":"POLR3B-related disorder","termid":"MONDO:0700277"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00637":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease, demyelinating, IIA 1I","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1811493","OMIM:619742","UMLS:C5676914"],"synonyms":[{"name":"CMT1I","type":"exact"},{"name":"Charcot-Marie-Tooth disease neuropathy, IIA 1I","type":"exact"},{"name":"Charcot-Marie-Tooth disease, demyelinating, IIA 1I","type":"exact"}],"termid":"MONDO:0030677","terms_by_termid":{"MONDO:0030677":null},"xrefs":{"Monarch":{"xref_id":"0030677"}}}


id: MONDO:0000498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anterior ischemic neuropathy that is the cause of vision loss that occurs in temporal arteritis (aka giant cell arteritis)","definition_xrefs":["Wikipedia:Arteritic_anterior_ischemic_optic_neuropathy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior ischemic optic neuropathy","termid":"MONDO:0006649"},{"relation_name":"is_a","term_name":"temporal arteritis","termid":"MONDO:0008538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arteritic anterior ischemic optic neuropathy","secondary_identifiers":["SCTID:733506009","UMLS:C2242711","icd11.foundation:815828716","DOID:0050863","MEDGEN:1378092"],"synonyms":[{"name":"arteritic aion","type":"exact"}],"termid":"MONDO:0000498","xrefs":{"Monarch":{"xref_id":"0000498"}}}


id: GO:0043431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol + S-adenosyl-L-methionine = ubiquinol + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:1479344","PMID:11583838","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinone methyltransferase activity (obsolete GO:0043431)","synonyms":[{"name":"2-octaprenyl-6-hydroxy phenol methylase activity","type":"exact"},{"name":"3-demethylubiquinone-9 3-methyltransferase activity","type":"exact"}],"termid":"GO:0043431"}


id: GO:0045969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of juvenile hormone biosynthetic process","termid":"GO:0007557"},{"relation_name":"is_a","term_name":"positive regulation of juvenile hormone metabolic process","termid":"GO:0045929"},{"relation_name":"is_a","term_name":"positive regulation of hormone biosynthetic process","termid":"GO:0046886"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"positively_regulates","term_name":"juvenile hormone biosynthetic process","termid":"GO:0006718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of juvenile hormone biosynthetic process","synonyms":[{"name":"activation of juvenile hormone biosynthetic process","type":"narrow"},{"name":"positive regulation of juvenile hormone anabolism","type":"exact"},{"name":"positive regulation of juvenile hormone biosynthesis","type":"exact"},{"name":"positive regulation of juvenile hormone formation","type":"exact"},{"name":"positive regulation of juvenile hormone synthesis","type":"exact"},{"name":"stimulation of juvenile hormone biosynthetic process","type":"narrow"},{"name":"up regulation of juvenile hormone biosynthetic process","type":"exact"},{"name":"up-regulation of juvenile hormone biosynthetic process","type":"exact"},{"name":"upregulation of juvenile hormone biosynthetic process","type":"exact"}],"termid":"GO:0045969"}


id: PBO:0001380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc ion transporter Zhf1","termid":"PBO:0001380"}


id: PBO:0089116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF2 methyltransferase Efm3","termid":"PBO:0089116"}


id: GO:0003352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of cilium movement, the directed, self-propelled movement of a cilium.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule-based movement","termid":"GO:0060632"},{"relation_name":"regulates","term_name":"cilium movement","termid":"GO:0003341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cilium movement","secondary_identifiers":["GO:1900172"],"synonyms":[{"name":"regulation of flagellar movement","type":"related"},{"name":"regulation of flagellum movement","type":"related"},{"name":"regulation of microtubule-based flagellum movement","type":"exact"}],"termid":"GO:0003352"}


id: GO:0001116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins, DNA, and RNA molecules to form a protein-DNA-RNA complex.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA-RNA complex organization","termid":"GO:0001115"},{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"protein-DNA-RNA complex assembly","termid":"GO:0001116"}


id: MONDO:0012806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia and immune deficiency","termid":"MONDO:0010293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"ectodermal dysplasia and immunodeficiency 2","secondary_identifiers":["MEDGEN:394295","MESH:C567411","DOID:0081079","GARD:15542","OMIM:612132","NCIT:C176826","UMLS:C2677481"],"synonyms":[{"name":"EPAID2","type":"exact"},{"name":"ectodermal dysplasia, anhidrotic, with T-cell immunodeficiency, autosomal dominant","type":"exact"}],"termid":"MONDO:0012806","xrefs":{"Monarch":{"xref_id":"0012806"}}}


id: GO:0047120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S,4R)-3,4-dihydroxycyclohexa-1,5-diene-1,4-dicarboxylate + NAD+ = 3,4-dihydroxybenzoate + CO2 + NADH.","definition_xrefs":["EC:1.3.1.53","RHEA:10744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(3S,4R)-3,4-dihydroxycyclohexa-1,5-diene-1,4-dicarboxylate dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0151","GO:0018514","KEGG_REACTION:R01633","MetaCyc:1.3.1.53-RXN"],"synonyms":[{"name":"(1R,2S)-dihydroxy-3,5-cyclohexadiene-1,4-dicarboxylate dehydrogenase activity","type":"related"},{"name":"(3S,4R)-3,4-dihydroxycyclohexa-1,5-diene-1,4-dicarboxylate:NAD+ oxidoreductase activity","type":"related"},{"name":"cis-4,5-dihydroxycyclohexa-1(6),2-diene-1,4-dicarboxylate:NAD+ oxidoreductase (decarboxylating)","type":"related"},{"name":"dihydroxy-3,5-cyclohexadiene-1,4-dicarboxylate dehydrogenase activity","type":"related"},{"name":"terephthalate 1,2-cis-dihydrodiol dehydrogenase activity","type":"exact"}],"termid":"GO:0047120"}


id: PBO:0004873
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates spo12","termid":"PBO:0004873"}


id: GO:0051342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cyclic nucleotide phosphodiesterase activity, the catalysis of the reaction: nucleotide 3',5'-cyclic phosphate + H2O = nucleotide 5'-phosphate.","definition_xrefs":["GOC:tb","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cyclic-nucleotide phosphodiesterase activity (obsolete GO:0051342)","synonyms":[{"name":"3',5' cyclic nucleotide phosphodiesterase regulator","type":"exact"},{"name":"3',5'-cyclic-AMP phosphodiesterase regulator","type":"narrow"},{"name":"cAMP phosphodiesterase regulator","type":"narrow"},{"name":"phosphodiesterase regulator","type":"related"},{"name":"regulation of 3',5' cyclic nucleotide phosphodiesterase activity","type":"exact"},{"name":"regulation of 3',5'-cyclic-AMP phosphodiesterase activity","type":"narrow"},{"name":"regulation of cAMP phosphodiesterase activity","type":"narrow"},{"name":"regulation of cGMP phosphodiesterase activity","type":"narrow"},{"name":"regulation of cyclic nucleotide phosphodiesterase activity","type":"exact"}],"termid":"GO:0051342"}


id: MONDO:0002331
data:
  {"annotated_genes":["SJAG_03986","SJAG_04148","SJAG_04000","SJAG_04017","SJAG_01374","SJAG_04013","SJAG_00864","SJAG_00933","SJAG_00093","SJAG_03361","SJAG_04621","SJAG_01185","SJAG_03182","SJAG_00471"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013836"},{"annotations":[86919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011303"},{"annotations":[87727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014752"},{"annotations":[87651,87650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014817"},{"annotations":[87649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014818"},{"annotations":[88217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032580"},{"annotations":[88218,88219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032581"},{"annotations":[88215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032582"},{"annotations":[87736,87737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026726"},{"annotations":[86821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014099"},{"annotations":[87655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014257"}]},"cv_name":"mondo","definition":"Pathological processes of the KIDNEY without inflammatory or neoplastic components. Nephrosis may be a primary disorder or secondary complication of other diseases. It is characterized by the NEPHROTIC SYNDROME indicating the presence of PROTEINURIA and HYPOALBUMINEMIA with accompanying EDEMA.","definition_xrefs":["MESH:D009401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00471":null,"SJAG_00864":null,"SJAG_00933":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_03182":null,"SJAG_03361":null,"SJAG_03986":null,"SJAG_04000":null,"SJAG_04013":null,"SJAG_04017":null,"SJAG_04148":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:10223","DOID:2527","UMLS:C0027720"],"synonyms":[{"name":"Nephroses","type":"exact"}],"termid":"MONDO:0002331","terms_by_termid":{"MONDO:0011303":null,"MONDO:0013836":null,"MONDO:0014099":null,"MONDO:0014257":null,"MONDO:0014752":null,"MONDO:0014817":null,"MONDO:0014818":null,"MONDO:0026726":null,"MONDO:0032580":null,"MONDO:0032581":null,"MONDO:0032582":null},"xrefs":{"Monarch":{"xref_id":"0002331"}}}


id: PBO:0076258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supervillin","termid":"PBO:0076258"}


id: GO:0080167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a karrikin stimulus. Karrikins are signaling molecules in smoke from burning vegetation that trigger seed germination for many angiosperms (flowering plants).","definition_xrefs":["PMID:20351290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to karrikin","termid":"GO:0080167"}


id: GO:0001591
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the neurotransmitter dopamine and activating adenylate cyclase via coupling to Gi/Go to initiate a change in cell activity.","definition_xrefs":["GOC:mah","IUPHAR_RECEPTOR:2254","IUPHAR_RECEPTOR:2256","IUPHAR_RECEPTOR:2258","ISBN:0953351033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine neurotransmitter receptor activity","termid":"GO:0004952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"dopamine neurotransmitter receptor activity, coupled via Gi/Go","secondary_identifiers":["GO:0001593","GO:0001670","GO:0001592"],"synonyms":[{"name":"dopamine D2 receptor activity","type":"narrow"},{"name":"dopamine D3 receptor activity","type":"narrow"},{"name":"dopamine D4 receptor activity","type":"narrow"}],"termid":"GO:0001591"}


id: FYPO:0007916
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of  dihydrosphingosine-1-phosphate (DHS-1P) measured in a cell is higher than normal.","definition_xrefs":["PMID:35008733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular dihydrosphingosine-1-phosphate level","synonyms":[{"name":"increased cellular level of DHS-1P","type":"exact"}],"termid":"FYPO:0007916"}


id: GO:0045762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of adenylate cyclase activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cyclase activity","termid":"GO:0031281"},{"relation_name":"is_a","term_name":"regulation of adenylate cyclase activity","termid":"GO:0045761"},{"relation_name":"is_a","term_name":"positive regulation of lyase activity","termid":"GO:0051349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of adenylate cyclase activity","synonyms":[{"name":"adenylate cyclase activator","type":"related"},{"name":"positive regulation of adenylyl cyclase activity","type":"exact"},{"name":"stimulation of adenylate cyclase activity","type":"narrow"},{"name":"up regulation of adenylate cyclase activity","type":"exact"},{"name":"up-regulation of adenylate cyclase activity","type":"exact"},{"name":"upregulation of adenylate cyclase activity","type":"exact"}],"termid":"GO:0045762"}


id: PBO:0052579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinase non-catalytic C-lobe domain containing 1","termid":"PBO:0052579"}


id: MONDO:1010431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atherosclerosis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atherosclerosis, non-human animal","termid":"MONDO:1010008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atherosclerosis, domestic cat","secondary_identifiers":["OMIA:000080-9685"],"termid":"MONDO:1010431","xrefs":{"Monarch":{"xref_id":"1010431"}}}


id: PBO:0076121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin binding protein 5","termid":"PBO:0076121"}


id: MONDO:1010965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cauda equina syndrome that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cauda equina syndrome, non-human animal","termid":"MONDO:1010227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cauda equina syndrome, dog","secondary_identifiers":["OMIA:000170-9615"],"termid":"MONDO:1010965","xrefs":{"Monarch":{"xref_id":"1010965"}}}


id: MOD:01625
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to 1-thioglycine.","definition_xrefs":["PubMed:11463785","PubMed:9367957","RESID:AA0265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur substitution for oxygen","termid":"MOD:00749"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-thioglycine","synonyms":[{"name":"1-thioglycine","type":"exact"},{"name":"2-amino-1-sulfanylethanone","type":"exact"},{"name":"Carboxy->Thiocarboxy","type":"related"},{"name":"MOD_RES 1-thioglycine","type":"exact"},{"name":"S(O)Gly","type":"exact"},{"name":"aminoethanethioic acid","type":"exact"},{"name":"aminothioacetic acid","type":"exact"},{"name":"thiocarboxylic acid","type":"related"}],"termid":"MOD:01625"}


id: GO:0102646
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 14betaH-scalarane-17alpha-19-diol = all-trans-geranylfarnesol + H2O.","definition_xrefs":["PMID:24200803","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"14betaH-scalarane-17alpha-19-diol synthase activity","secondary_identifiers":["MetaCyc:RXN-15759"],"termid":"GO:0102646"}


id: GO:0046609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sulfate(out) + solute(in) = solute(in) + sulfate(out), by a channel in a cell membrane whose opening is governed by the membrane potential.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete voltage-gated sulfate antiporter activity (obsolete GO:0046609)","synonyms":[{"name":"prestin","type":"narrow"},{"name":"voltage gated sulfate antiporter activity","type":"exact"},{"name":"voltage-dependent sulfate antiporter activity","type":"exact"},{"name":"voltage-sensitive sulfate antiporter activity","type":"exact"},{"name":"voltage-sensitive sulphate antiporter activity","type":"exact"}],"termid":"GO:0046609"}


id: MOD:01095
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modification from DeltaMass. OBSOLETE because not an amino acid modification.","definition_xrefs":["DeltaMass:240"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01095 Matrix alpha cyano MH+ (obsolete MOD:01095)","termid":"MOD:01095"}


id: PBO:0056251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mal, T cell differentiation protein 2","termid":"PBO:0056251"}


id: PR:O74363
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sqs1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch and R3H domain-containing protein C30B4.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.02c","synonyms":[{"name":"Spom972h-sqs1","type":"exact"}],"termid":"PR:O74363"}


id: MONDO:0025712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary angioedema","termid":"MONDO:0019623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"angioedema, hereditary, 4","secondary_identifiers":["OMIM:619360","MEDGEN:1787336","UMLS:C5543503"],"synonyms":[{"name":"HAE4","type":"exact"}],"termid":"MONDO:0025712","xrefs":{"Monarch":{"xref_id":"0025712"}}}


id: PBO:0041143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 like 4 pseudogene 2","termid":"PBO:0041143"}


id: GO:0048266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"part_of","term_name":"response to pain","termid":"GO:0048265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to pain","synonyms":[{"name":"behavioural response to pain","type":"exact"}],"termid":"GO:0048266"}


id: PBO:0071312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 35","termid":"PBO:0071312"}


id: GO:0102163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: coenzyme A + a (3R)-3-hydroxyacyl-[acyl-carrier protein] = a (3R)-3-hydroxyacyl-CoA + a holo-[acyl-carrier protein].","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-hydroxyacyl-CoA-acyl carrier protein transferase activity (obsolete GO:0102163)","termid":"GO:0102163"}


id: GO:0102293
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pheophytin b + H2O = H+ + pheophorbide b + phytol.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete pheophytinase b activity (obsolete GO:0102293)","termid":"GO:0102293"}


id: PBO:0089856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 family ATP-dependent chromatin remodeller Ino80","termid":"PBO:0089856"}


id: PBO:0055590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3026","termid":"PBO:0055590"}


id: PBO:0063770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 2 pseudogene 1","termid":"PBO:0063770"}


id: MONDO:0008972
data:
  {"annotated_genes":["SJAG_00326"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87870],"is_not":false,"summary":null,"term":"MONDO:0008972"}]},"cv_name":"mondo","definition":"A condition that impairs the normal development of many parts of the body. The major features of this disorder include skeletal abnormalities, distinctive facial features, intellectual disability, and respiratory problems. The condition is caused by mutations in the PEX7 gene. It is inherited in an autosomal recessive pattern. Rhizomelic chondrodysplasia punctata type 1 is one of five types of rhizomelic chondrodysplasia punctata. The types have similar features and are distinguished by their genetic cause.","direct_ancestors":[{"relation_name":"is_a","term_name":"rhizomelic chondrodysplasia punctata","termid":"MONDO:0015776"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX7 defect","termid":"MONDO:0100272"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00326":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0002525","MONDO:0005328","MONDO:0006025","MONDO:0005066","MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"rhizomelic chondrodysplasia punctata type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:309789","icd11.foundation:44503513","GARD:6049","DOID:0110851","MEDGEN:347072","NANDO:1200763","UMLS:C1859133","OMIM:215100"],"synonyms":[{"name":"PBD9","type":"exact"},{"name":"PEX7 rhizomelic chondrodysplasia punctata","type":"exact"},{"name":"Pbd9","type":"exact"},{"name":"RCDP1","type":"exact"},{"name":"Rcdp1","type":"exact"},{"name":"chondrodysplasia punctata, rhizomelic form","type":"related"},{"name":"chondrodystrophia calcificans punctata","type":"related"},{"name":"peroxisome biogenesis disorder 9","type":"exact"},{"name":"rhizomelic chondrodysplasia punctata caused by mutation in PEX7","type":"exact"},{"name":"rhizomelic chondrodysplasia punctata type 1","type":"exact"},{"name":"rhizomelic chondrodysplasia punctata, type 1","type":"exact"}],"termid":"MONDO:0008972","terms_by_termid":{"MONDO:0008972":null},"xrefs":{"Monarch":{"xref_id":"0008972"}}}


id: PR:O74316
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC15D4.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C15D4.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.11c","synonyms":[{"name":"Spom972h-SPBC15D4.11c","type":"exact"}],"termid":"PR:O74316"}


id: MONDO:0044737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive complex spastic paraplegia due to kennedy pathway dysfunction","secondary_identifiers":["GARD:17946","UMLS:C5568576","MEDGEN:1799999","DOID:0112349","Orphanet:506353"],"synonyms":[{"name":"autosomal recessive complex SPG due to Kennedy pathway dysfunction","type":"exact"}],"termid":"MONDO:0044737","xrefs":{"Monarch":{"xref_id":"0044737"}}}


id: PBO:0046289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 6","termid":"PBO:0046289"}


id: PBO:0065384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 11","termid":"PBO:0065384"}


id: PBO:0054327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1720","termid":"PBO:0054327"}


id: PBO:0072054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 24","termid":"PBO:0072054"}


id: PBO:0027060
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_endo-1,6-beta-glucosidase_activity","termid":"PBO:0027060"}


id: MONDO:0045014
data:
  {"annotated_genes":["SJAG_03098","SJAG_03275"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012994"},{"annotations":[86869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007495"},{"annotations":[87246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100186"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of tetrahydrobiopterin metabolic process.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of phenylalanine metabolism","termid":"MONDO:0017306"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03098":null,"SJAG_03275":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"tetrahydrobiopterin metabolic process disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:575174","SCTID:237913008","UMLS:C0342676"],"synonyms":[{"name":"disorder of tetrahydrobiopterin metabolic process","type":"exact"},{"name":"disorder of tetrahydrobiopterin metabolism","type":"exact"},{"name":"tetrahydrobiopterin metabolism disease","type":"exact"}],"termid":"MONDO:0045014","terms_by_termid":{"MONDO:0007495":null,"MONDO:0012994":null,"MONDO:0100186":null},"xrefs":{"Monarch":{"xref_id":"0045014"}}}


id: GO:0016554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion of a cytosine residue to uridine in an RNA molecule by deamination.","definition_xrefs":["PMID:11092837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base conversion or substitution editing","termid":"GO:0016553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytidine to uridine editing","secondary_identifiers":["Reactome:R-HSA-72200"],"termid":"GO:0016554"}


id: SO:0001861
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 10-bp promoter element bound by sterol regulatory element binding proteins (SREBPs), found in promoters of genes involved in sterol metabolism. Many variants of the sequence ATCACCCCAC function as SREs.","definition_xrefs":["PMID:16537923","GO:mah","PMID:11111080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol_regulatory_element","synonyms":[{"name":"SRE","type":"broad"}],"termid":"SO:0001861"}


id: PBO:0067100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 141, pseudogene","termid":"PBO:0067100"}


id: GO:0032076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of deoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nuclease activity","termid":"GO:0032074"},{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of deoxyribonuclease activity","synonyms":[{"name":"DNase inhibitor","type":"related"},{"name":"deoxyribonuclease inhibitor","type":"related"},{"name":"down regulation of deoxyribonuclease activity","type":"exact"},{"name":"down-regulation of deoxyribonuclease activity","type":"exact"},{"name":"downregulation of deoxyribonuclease activity","type":"exact"},{"name":"inhibition of deoxyribonuclease activity","type":"narrow"}],"termid":"GO:0032076"}


id: GO:0008210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving estrogens, C18 steroid hormones that can stimulate the development of female sexual characteristics. Also found in plants.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"estrogen metabolic process","synonyms":[{"name":"estrogen metabolism","type":"exact"},{"name":"oestrogen metabolic process","type":"exact"},{"name":"oestrogen metabolism","type":"exact"}],"termid":"GO:0008210"}


id: PBO:0001001
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.14","termid":"PBO:0001001"}


id: GO:0102272
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: glutathionate + a poly gamma-glutamylcysteine-beta-alanine = glycine + a poly gamma-glutamylcysteine-beta-alanine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete homophytochelatin synthase activity (polymer-forming) (obsolete GO:0102272)","termid":"GO:0102272"}


id: GO:0047253
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-beta-D-glucosaminyl-1,6-beta-D-(N-acetyl-B-glucosaminyl-1,2)-beta-D-mannosyl-R + UDP-N-acetyl-D-glucosamine = N-acetyl-beta-D-glucosaminyl-1,6-beta-D-(N-acetyl-D-glucosaminyl-1,2-beta)-(N-acetyl-D-glucosaminyl-1,4-beta)-D-mannosyl-R + UDP.","definition_xrefs":["EC:2.4.1.201","MetaCyc:2.4.1.201-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"alpha-1,6-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity","secondary_identifiers":["RHEA:19945"],"synonyms":[{"name":"N-acetylglucosaminyltransferase VI activity","type":"related"},{"name":"N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase VI activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:2,6-bis(N-acetyl-beta-D-glucosaminyl)-alpha-D-mannosyl-glycoprotein 4-beta-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyl-transferase activity","type":"exact"},{"name":"mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-glycopeptide beta-1->4-acetylglucosaminyltransferase VI","type":"related"},{"name":"uridine diphosphoacetylglucosamine-glycopeptide beta-1->4-acetylglucosaminyltransferase VI activity","type":"related"}],"termid":"GO:0047253"}


id: PBO:0002888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1770 family protein","termid":"PBO:0002888"}


id: GO:0033515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including alpha-aminoadipate; in this pathway, L-lysine is converted to 2-aminoadipate-6-semialdehyde by lysine 6-aminotransferase.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine catabolic process to acetyl-CoA","termid":"GO:0019474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0006790","GO:0006520","GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"L-lysine catabolic process using lysine 6-aminotransferase","synonyms":[{"name":"L-lysine breakdown using lysine 6-aminotransferase","type":"exact"},{"name":"L-lysine degradation using lysine 6-aminotransferase","type":"exact"}],"termid":"GO:0033515"}


id: PBO:0055361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2790","termid":"PBO:0055361"}


id: PR:P40232
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A casein kinase II subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11740:SF0","PRO:DNx","OMA:SCHPO01867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase II subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1851.03","secondary_identifiers":["UniProtKB:P40232"],"synonyms":[{"name":"CK II beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CSNK2B","type":"exact"}],"termid":"PR:P40232"}


id: PBO:0056228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member H1","termid":"PBO:0056228"}


id: MONDO:0015264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cryptogenic organizing pneumonia (COP) is a form of idiopathic interstitial pneumonia characterized pathologically by organizing pneumonia (OP) that presents with non-specific flu-like symptoms, as well as cough and dyspnea and where no etiological agent is found.","definition_xrefs":["Orphanet:1302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic interstitial pneumonia","termid":"MONDO:0002429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptogenic organizing pneumonia","secondary_identifiers":["NCIT:C62586","DOID:0050157","ICD10CM:J84.116","ICD9:516.36","SCTID:68409003","UMLS:C0242770","EFO:1001300","NANDO:1200421","GARD:1620","MESH:D018549","MEDGEN:116663","icd11.foundation:1937662238","SCTID:719218000","NORD:873"],"synonyms":[{"name":"COP","type":"exact"},{"name":"Organizing Pneumonia","type":"exact"},{"name":"bronchiolitis obliterans organising pneumonia","type":"exact"},{"name":"bronchiolitis obliterans organizing pneumonia","type":"exact"},{"name":"constrictive bronchiolitis","type":"related"},{"name":"cryptogenic organising pneumonitis","type":"exact"},{"name":"cryptogenic organizing pneumonitis","type":"exact"},{"name":"idiopathic BOOP","type":"related"},{"name":"idiopathic bronchiolitis obliterans organising pneumonia","type":"related"},{"name":"idiopathic bronchiolitis obliterans organizing pneumonia","type":"related"},{"name":"idiopathic bronchiolitis obliterans with organising pneumonia","type":"exact"},{"name":"idiopathic bronchiolitis obliterans with organizing pneumonia","type":"exact"},{"name":"organising pneumonia","type":"exact"},{"name":"organizing pneumonia","type":"exact"}],"termid":"MONDO:0015264","xrefs":{"Monarch":{"xref_id":"0015264"}}}


id: GO:0052804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nitroimidazoles, imidazole derivatives with a nitro group attached to one ring.","definition_xrefs":["PMID:16387854","PMID:19039139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imidazole-containing compound catabolic process","termid":"GO:0052805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitroimidazole catabolic process","synonyms":[{"name":"nitroimidazole breakdown","type":"exact"},{"name":"nitroimidazole catabolism","type":"exact"},{"name":"nitroimidazole degradation","type":"exact"}],"termid":"GO:0052804"}


id: GO:0070942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a target cell by a neutrophil.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"},{"relation_name":"is_a","term_name":"neutrophil mediated immunity","termid":"GO:0002446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil mediated cytotoxicity","synonyms":[{"name":"neutrophil mediated cell killing","type":"exact"}],"termid":"GO:0070942"}


id: GO:1990571
data:
  {"annotated_genes":["SJAG_00794","SJAG_02624","SJAG_02761","SJAG_03540","SJAG_04076","SJAG_01805","SJAG_01613","SJAG_02814","SJAG_03683"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66706,70179,95681,97215,101137,102303,104368,111113,117927],"is_not":false,"summary":null,"term":"GO:1990571"}]},"cv_name":"biological_process","definition":"The process by which centromeres/kinetochores attach to and migrate along microtubules to become localized to clusters at the spindle pole body during a meiotic prometaphase I.","definition_xrefs":["PMID:9009280","PMID:10366596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome movement towards spindle pole","termid":"GO:0016344"},{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"},{"relation_name":"is_a","term_name":"centromere clustering","termid":"GO:0098653"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00794":null,"SJAG_01613":null,"SJAG_01805":null,"SJAG_02624":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03540":null,"SJAG_03683":null,"SJAG_04076":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"meiotic centromere clustering","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"centromere clustering during meiosis","type":"exact"},{"name":"homologous chromosome movement towards spindle pole in meiosis I prometaphase","type":"exact"}],"termid":"GO:1990571","terms_by_termid":{"GO:1990571":null}}


id: PBO:0073413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 17","termid":"PBO:0073413"}


id: GO:0032137
data:
  {"annotated_genes":["SJAG_02226","SJAG_02748"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108031,118446],"is_not":false,"summary":null,"term":"GO:0032137"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a G/T mispair.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02226":null,"SJAG_02748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"guanine/thymine mispair binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G/T mispair binding","type":"exact"},{"name":"T/G mispair binding","type":"exact"},{"name":"thymine/guanine mispair binding","type":"exact"}],"termid":"GO:0032137","terms_by_termid":{"GO:0032137":null}}


id: MONDO:0002011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary angioedema (obsolete MONDO:0002011)","termid":"MONDO:0002011","xrefs":{"Monarch":{"xref_id":"0002011"}}}


id: PBO:0091738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR adaptor protein, human endophilin A1-like ortholog, implicated in endocytosis","termid":"PBO:0091738"}


id: MONDO:0017118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with a cerebellar malformation as major feature (obsolete MONDO:0017118)","secondary_identifiers":["Orphanet:269523"],"termid":"MONDO:0017118","xrefs":{"Monarch":{"xref_id":"0017118"}}}


id: GO:0004989
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the biogenic amine octopamine to initiate a change in cell activity. Octopamine is found in both vertebrates and invertebrates and can have properties both of a hormone and a neurotransmitter and acts as an adrenergic agonist.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled amine receptor activity","termid":"GO:0008227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"octopamine receptor activity","termid":"GO:0004989"}


id: PBO:0076494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TARS1 divergent transcript","termid":"PBO:0076494"}


id: MONDO:0021923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by bilateral anophthalmia (absence of one or both eyes), esophageal atresia (the upper esophagus ends and does not connect with the lower esophagus and stomach), and cryptorchidism (a condition in which one or both of the testes fail to descend from the abdomen into the scrotum). This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["PMID:1352427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal atresia","termid":"MONDO:0001044"},{"relation_name":"is_a","term_name":"cryptorchidism","termid":"MONDO:0009047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Arroyo Garcia Cimadevilla syndrome","secondary_identifiers":["UMLS:C2931494","MEDGEN:419817","MESH:C537439"],"synonyms":[{"name":"bilateral anophthalmia, esophageal atresia, and right cryptorchidism","type":"related"}],"termid":"MONDO:0021923","xrefs":{"Monarch":{"xref_id":"0021923"}}}


id: GO:0047309
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-dopa = 3,4-dihydroxyphenylpyruvate + L-glutamate.","definition_xrefs":["EC:2.6.1.49","RHEA:15273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"dihydroxyphenylalanine transaminase activity","secondary_identifiers":["KEGG_REACTION:R02077","MetaCyc:2.6.1.49-RXN"],"synonyms":[{"name":"3,4-dihydroxy-L-phenylalanine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"DOPA aminotransferase activity","type":"related"},{"name":"L-dopa transaminase activity","type":"related"},{"name":"aspartate-DOPP transaminase (ADT)","type":"related"},{"name":"dihydroxyphenylalanine aminotransferase activity","type":"exact"},{"name":"dopa transaminase activity","type":"related"},{"name":"glutamate-DOPP transaminase (GDT)","type":"related"},{"name":"phenylalanine-DOPP transaminase (PDT)","type":"related"}],"termid":"GO:0047309"}


id: PBO:0074984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-26","termid":"PBO:0074984"}


id: GO:0017090
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is located in the cell membrane, and is involved in the metabolism of peptides, including neuropeptides. The complex has metalloendopeptidase activity that catalyzes the hydrolysis of protein and peptide substrates, preferentially on carboxyl side of hydrophobic residues.","definition_xrefs":["GOC:mah","MEROPS_fam:M12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"meprin A complex","synonyms":[{"name":"PABA peptide hydrolase complex","type":"exact"}],"termid":"GO:0017090"}


id: FYPO:0000235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype observed in the vegetative growth phase of the life cycle in which regulation of translation in response to osmotic stress is abnormal. Translation may be down-regulated to a greater extent than normal, and may not be restored to normal levels post-stress.","definition_xrefs":["PomBase:mah","PMID:18065650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to osmotic stress","termid":"FYPO:0000193"},{"relation_name":"is_a","term_name":"abnormal regulation of translation in response to stress during vegetative growth","termid":"FYPO:0001332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000298","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"abnormal regulation of translation in response to osmotic stress","synonyms":[{"name":"abnormal regulation of translation in response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of translation in response to osmotic stress during vegetative growth","type":"exact"},{"name":"abnormal translational regulation in response to osmotic stress","type":"exact"},{"name":"defective in recovery of translation after hyperosmotic shock","type":"related"}],"termid":"FYPO:0000235"}


id: MONDO:1012633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any difference of sexual differentiation that occurs in dogs and is characterized by the presence of testicular tissue in the gonads and varying degrees of phenotypic masculinization with a female karyotype (XX) and absence of both the SRY gene and the Y chromosome.","definition_xrefs":["OMIA:000901-9615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"difference of sexual differentiation, non-human animal","termid":"MONDO:0700105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XX difference of sexual development, dog","synonyms":[{"name":"XX DSD testicular/ovotesticular, dog","type":"related"},{"name":"XX sex reversal, dog","type":"related"},{"name":"XXSR","type":"exact"}],"termid":"MONDO:1012633","xrefs":{"Monarch":{"xref_id":"1012633"}}}


id: PBO:0078622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 71","termid":"PBO:0078622"}


id: GO:0005956
data:
  {"annotated_genes":["SJAG_01799","SJAG_00142","SJAG_03931"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75947,77792,79890],"is_not":false,"summary":null,"term":"GO:0005956"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses protein serine/threonine kinase activity, and contains two catalytic alpha subunits and two regulatory beta subunits. Protein kinase CK2 complexes are found in nearly every subcellular compartment, and can phosphorylate many protein substrates in addition to casein.","definition_xrefs":["GOC:mah","PMID:10994779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_01799":null,"SJAG_03931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein kinase CK2 complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"casein kinase II complex","type":"exact"}],"termid":"GO:0005956","terms_by_termid":{"GO:0005956":null}}


id: PBO:0042709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin EGF LAG seven-pass G-type receptor 1","termid":"PBO:0042709"}


id: MONDO:0006022
data:
  {"annotated_genes":["SJAG_00516","SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011422"},{"annotations":[87968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011268"}]},"cv_name":"mondo","definition":"An abnormally high acidity of the blood and other body tissues. Acidosis can be either respiratory or metabolic.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hematologic disorder","termid":"MONDO:0005570"},{"relation_name":"is_a","term_name":"disorder of acid-base balance","termid":"MONDO:0041261"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00516":null,"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"acidosis disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1296","ICD9:276.2","UMLS:C0001122","HP:0001941","SCTID:51387008","EFO:1000014"],"synonyms":[{"name":"acidosis","type":"exact"}],"termid":"MONDO:0006022","terms_by_termid":{"MONDO:0011268":null,"MONDO:0011422":null},"xrefs":{"Monarch":{"xref_id":"0006022"}}}


id: PBO:0040457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+/K+ transporting non-gastric alpha2 subunit","termid":"PBO:0040457"}


id: PBO:0092014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b, Cob1","termid":"PBO:0092014"}


id: PBO:0072092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 23","termid":"PBO:0072092"}


id: GO:0002232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an immune cell in response to an external stimulus contributing to an inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte migration involved in inflammatory response","termid":"GO:0002523"},{"relation_name":"is_a","term_name":"leukocyte chemotaxis","termid":"GO:0030595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte chemotaxis involved in inflammatory response","synonyms":[{"name":"immune cell chemotaxis during inflammatory response","type":"related"},{"name":"leucocyte chemotaxis during inflammatory response","type":"related"},{"name":"leukocyte chemotaxis during inflammatory response","type":"related"}],"termid":"GO:0002232"}


id: SO:0000265
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a lysine anticodon, and a 3' lysine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"lysine_tRNA_primary_transcript","termid":"SO:0000222"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl_tRNA","synonyms":[{"name":"lysyl tRNA","type":"exact"},{"name":"lysyl-transfer RNA","type":"exact"},{"name":"lysyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000265"}


id: GO:0015166
data:
  {"annotated_genes":["SJAG_03595","SJAG_04506"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73785,74784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005366"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a polyol from one side of a membrane to the other. A polyol is any polyhydric alcohol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03595":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"polyol transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-429571"],"synonyms":[{"name":"sugar/polyol channel activity","type":"narrow"}],"termid":"GO:0015166","terms_by_termid":{"GO:0005366":null}}


id: PBO:0050907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced with helicase C domain 1","termid":"PBO:0050907"}


id: GO:0007413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The collection of axons into a bundle of rods, known as a fascicle.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron recognition","termid":"GO:0008038"},{"relation_name":"is_a","term_name":"neuron projection fasciculation","termid":"GO:0106030"},{"relation_name":"part_of","term_name":"axon development","termid":"GO:0061564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axonal fasciculation","synonyms":[{"name":"fasciculation of neuron","type":"related"}],"termid":"GO:0007413"}


id: PBO:0087025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L12A; rpl12a rpl12b double mutant exhibits slow growth and slow translation; homologous to mammalian ribosomal protein L12 and bacterial L11; RPL12A has a paralog, RPL12B, that arose from the whole genome duplication","termid":"PBO:0087025"}


id: GO:0019954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of reproduction in which new individuals are produced from a single organism, either from an unfertilized egg or from a single cell or group of cells.","definition_xrefs":["PMID:22977071","PMID:28779329","PMID:29559496","ISBN:0387520546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"asexual reproduction","secondary_identifiers":["Wikipedia:Asexual_reproduction"],"synonyms":[{"name":"parthenogenesis","type":"related"}],"termid":"GO:0019954"}


id: MONDO:0004866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the pharyngotympanic tube.","definition_xrefs":["MONDO:patterns/location_top"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-suppurative otitis media","termid":"MONDO:0001212"},{"relation_name":"is_a","term_name":"middle ear disorder","termid":"MONDO:0003276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eustachian tube disorder","secondary_identifiers":["SCTID:69494008","DOID:9739","EFO:0009667","ICD10CM:H68","UMLS:C0271468","MEDGEN:543364","ICD9:381.8","ICD9:381.9","ICD9:381.89"],"synonyms":[{"name":"auditory tube disorder","type":"related"},{"name":"disease of eustachian tube","type":"related"},{"name":"disease of pharyngotympanic tube","type":"exact"},{"name":"disease or disorder of pharyngotympanic tube","type":"exact"},{"name":"disorder of eustachian tube","type":"related"},{"name":"disorder of pharyngotympanic tube","type":"exact"},{"name":"eustachian tube disorder","type":"exact"},{"name":"pharyngotympanic tube disease","type":"exact"},{"name":"pharyngotympanic tube disease or disorder","type":"exact"}],"termid":"MONDO:0004866","xrefs":{"Monarch":{"xref_id":"0004866"}}}


id: PBO:0059588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTARC2 pseudogene 1","termid":"PBO:0059588"}


id: PBO:0001387
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"function depends on a functional spindle assembly checkpoint","termid":"PBO:0001387"}


id: GO:0070480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of the transcript body of a nuclear-transcribed mRNA that occurs independent of deadenylation, but requires decapping followed by transcript decay.","definition_xrefs":["GOC:jp"],"gene_count":0,"genotype_count":0,"name":"obsolete exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-independent decay (obsolete GO:0070480)","termid":"GO:0070480"}


id: MONDO:0700003
data:
  {"annotated_genes":["SJAG_01156"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032747"}]},"cv_name":"mondo","definition":"Disorder associated with pregnancy, childbirth, and puerperium.","direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01156":null},"genotype_count":0,"is_obsolete":false,"name":"obstetric disorder","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0700003","terms_by_termid":{"MONDO:0032747":null},"xrefs":{"Monarch":{"xref_id":"0700003"}}}


id: GO:0010952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of peptidase activity, the hydrolysis of peptide bonds within proteins.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of proteolysis","termid":"GO:0045862"},{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"},{"relation_name":"is_a","term_name":"regulation of peptidase activity","termid":"GO:0052547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidase activity","termid":"GO:0010952"}


id: GO:0000310
data:
  {"annotated_genes":["SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95646],"is_not":false,"summary":null,"term":"GO:0000310"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + XMP = 5-phospho-alpha-D-ribose 1-diphosphate + xanthine.","definition_xrefs":["RHEA:10800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine phosphoribosyltransferase activity","termid":"GO:0106130"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"xanthine phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.4.2.22","MetaCyc:XANPRIBOSYLTRAN-RXN","GO:0009043"],"synonyms":[{"name":"5-phospho-alpha-D-ribose-1-diphosphate:xanthine phospho-D-ribosyltransferase activity","type":"related"},{"name":"XMP pyrophosphorylase activity","type":"related"},{"name":"XMP:diphosphate 5-phospho-alpha-D-ribosyltransferase activity","type":"related"},{"name":"Xan phosphoribosyltransferase activity","type":"related"},{"name":"xanthine-guanine phosphoribosyltransferase activity","type":"exact"},{"name":"xanthosine 5'-phosphate pyrophosphorylase activity","type":"related"},{"name":"xanthylate pyrophosphorylase activity","type":"related"},{"name":"xanthylic pyrophosphorylase activity","type":"related"}],"termid":"GO:0000310","terms_by_termid":{"GO:0000310":null}}


id: GO:0033166
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multilayered extraembryonic matrix that functions as a substrate for cell adhesion through early development. It is thought to protect and lubricate the embryo, stabilize the blastomeres during morphogenesis, and regulate nutrient intake. The major constituent of the hyaline layer is the protein hyalin. This matrix has been found in echinoderms.","definition_xrefs":["PMID:9473317","PMID:1721506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specialized extracellular matrix","termid":"GO:0140047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hyaline layer","termid":"GO:0033166"}


id: GO:0018664
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoate + H+ + NADPH + O2 = 4-hydroxybenzoate + H2O + NADP+.","definition_xrefs":["RHEA:18033","EC:1.14.14.92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"benzoate 4-monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0623","KEGG_REACTION:R01295","MetaCyc:BENZOATE-4-MONOOXYGENASE-RXN"],"synonyms":[{"name":"4-hydroxybenzoic hydroxylase activity","type":"exact"},{"name":"benzoate 4-hydroxylase activity","type":"related"},{"name":"benzoate,NADPH:oxygen oxidoreductase (4-hydroxylating)","type":"related"},{"name":"benzoate-p-hydroxylase activity","type":"related"},{"name":"benzoate-para-hydroxylase activity","type":"related"},{"name":"benzoic 4-hydroxylase activity","type":"related"},{"name":"benzoic acid 4-hydroxylase activity","type":"related"},{"name":"p-hydroxybenzoate hydroxylase activity","type":"related"}],"termid":"GO:0018664"}


id: GO:0003025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The neural regulation of blood pressure in which baroreceptors sense the amount of stretch occurring in vessels and respond to the input via central nervous system control.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by baroreceptor feedback","synonyms":[{"name":"baroreceptor regulation of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0003025"}


id: MONDO:0971172
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia, brain anomalies, distinctive facies, and absent language","secondary_identifiers":["MEDGEN:1854654","Orphanet:686488","UMLS:C5935628","OMIM:620851"],"synonyms":[{"name":"NEDHAFA","type":"exact"},{"name":"RENU","type":"exact"},{"name":"RNU4-2-related neurodevelopmental disorder-facial dysmorphism-white matter abnormalities-short stature syndrome","type":"exact"},{"name":"RNU4-2-related neurodevelopmental syndrome","type":"exact"},{"name":"ReNU syndrome","type":"exact"}],"termid":"MONDO:0971172","xrefs":{"Monarch":{"xref_id":"0971172"}}}


id: PBO:0077061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin type 1 domain containing 7B","termid":"PBO:0077061"}


id: PBO:0005621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin synthase","termid":"PBO:0005621"}


id: MONDO:0100077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital alveolar dysplasia characterized anatomically by a defective and hypoplastic development of pulmonary alveoli that is commonly associated with atelectasis and can be responsible for atelectasis.","definition_xrefs":["PMID:18874463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary veins anomaly","termid":"MONDO:0020295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital alveolar dysplasia","secondary_identifiers":["UMLS:C0035220","MEDGEN:20539"],"synonyms":[{"name":"CAD","type":"exact"}],"termid":"MONDO:0100077","xrefs":{"Monarch":{"xref_id":"0100077"}}}


id: PBO:0041018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family B member 1","termid":"PBO:0041018"}


id: PBO:0004834
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypermethioninemia","termid":"PBO:0004834"}


id: FYECO:0000123
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were grown to stationary phase.","definition_xrefs":["PMID:10467002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth timing","termid":"FYECO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth to stationary phase","termid":"FYECO:0000123"}


id: PATO:0000094
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000094 drug sensitivity (obsolete PATO:0000094)","termid":"PATO:0000094"}


id: GO:0070467
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains DNA ligase III, DNA polymerase epsilon, a 5'-3' exonuclease, and the SMC1 and SMC2 proteins, and is involved in recombinational repair of deletions and gaps in DNA.","definition_xrefs":["PMID:8392064","PMID:8670910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"RC-1 DNA recombination complex","synonyms":[{"name":"DNA recombination complex RC-1","type":"exact"},{"name":"RC-1 complex (recombination complex 1)","type":"exact"}],"termid":"GO:0070467"}


id: PBO:0017614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase Fol2 (predicted)","termid":"PBO:0017614"}


id: FYPO:0001181
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of maltose alpha-glucosidase (also known as maltase) activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal alpha-glucosidase activity","termid":"FYPO:0001182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal maltase activity","synonyms":[{"name":"normal maltose alpha-glucosidase activity","type":"exact"}],"termid":"FYPO:0001181"}


id: MONDO:0016418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple system atrophy, cerebellar type (MSA-c) is a form of multiple system atrophy (MSA) with predominant cerebellar features (gait and limb ataxia, oculomotor dysfunction, and dysarthria).","definition_xrefs":["Orphanet:227510"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-hereditary degenerative ataxia (obsolete MONDO:0016592)","termid":"MONDO:0016592"},{"relation_name":"is_a","term_name":"multiple system atrophy","termid":"MONDO:0007803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"multiple system atrophy, cerebellar type","secondary_identifiers":["MEDGEN:1843304","GARD:20565","NANDO:1200035","UMLS:C5554234","icd11.foundation:1585600114"],"synonyms":[{"name":"MSA, cerebellar type","type":"exact"},{"name":"MSA-c","type":"exact"},{"name":"sporadic OPCA type 1","type":"exact"},{"name":"sporadic olivopontocerebellar atrophy type 1","type":"exact"}],"termid":"MONDO:0016418","xrefs":{"Monarch":{"xref_id":"0016418"}}}


id: GO:1904725
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any TFIIB-class transcription factor binding that is involved in negative regulation of DNA-templated transcription.","definition_xrefs":["GOC:rb","GOC:TermGenie","GO_REF:0000061","PMID:12461786"],"gene_count":0,"genotype_count":0,"name":"obsolete TFIIB-class transcription factor binding involved in negative regulation of transcription (obsolete GO:1904725)","synonyms":[{"name":"TFIIB-class transcription factor binding involved in down regulation of gene-specific transcription","type":"related"},{"name":"TFIIB-class transcription factor binding involved in down regulation of transcription, DNA-dependent","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in down-regulation of gene-specific transcription","type":"related"},{"name":"TFIIB-class transcription factor binding involved in down-regulation of transcription, DNA-dependent","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in downregulation of gene-specific transcription","type":"related"},{"name":"TFIIB-class transcription factor binding involved in downregulation of transcription, DNA-dependent","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in inhibition of gene-specific transcription","type":"related"},{"name":"TFIIB-class transcription factor binding involved in inhibition of transcription, DNA-dependent","type":"narrow"},{"name":"TFIIB-class transcription factor binding involved in negative regulation of cellular transcription, DNA-dependent","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in negative regulation of gene-specific transcription","type":"related"},{"name":"TFIIB-class transcription factor binding involved in negative regulation of transcription, DNA-dependent","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in negative regulation of transcription, DNA-templated","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in transcription repressor activity","type":"related"}],"termid":"GO:1904725"}


