# terms

id: MONDO:0958180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bradyopsia","termid":"MONDO:0012033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"prolonged electroretinal response suppression 1","secondary_identifiers":["OMIM:608415","MEDGEN:1840510","UMLS:C5829874","DOID:0070363"],"termid":"MONDO:0958180","xrefs":{"Monarch":{"xref_id":"0958180"}}}


id: PR:P36583
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pck2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C-like 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12D12.04c","synonyms":[{"name":"Spom972h-pck2","type":"exact"}],"termid":"PR:P36583"}


id: PBO:0013756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-binding protein Knd1 (predicted)","termid":"PBO:0013756"}


id: FYPO:0001796
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the centromeric region of a chromosome is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"},{"relation_name":"output_of","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"protein mislocalized to centromere","synonyms":[{"name":"ectopic protein localization to centromere","type":"exact"},{"name":"protein mislocalised to centromere","type":"exact"},{"name":"protein mislocalised to centromere during vegetative growth","type":"exact"},{"name":"protein mislocalized to centromere during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to centromere during vegetative growth","type":"exact"},{"name":"protein mislocalized to chromosome, centromeric region","type":"exact"}],"termid":"FYPO:0001796"}


id: GO:0002278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a eosinophil resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell activation involved in immune response","termid":"GO:0002275"},{"relation_name":"is_a","term_name":"eosinophil activation","termid":"GO:0043307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil activation involved in immune response","synonyms":[{"name":"eosinophil activation during immune response","type":"related"}],"termid":"GO:0002278"}


id: PBO:0040586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BACE1 antisense RNA","termid":"PBO:0040586"}


id: PBO:0036286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg14","termid":"PBO:0036286"}


id: PBO:0043609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMM domain containing 2","termid":"PBO:0043609"}


id: PR:Q9USH9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized ABC transporter ATP-binding protein YjjK that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04544","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ABC transporter ATP-binding protein C825.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC825.01","secondary_identifiers":["UniProtKB:Q9USH9"],"synonyms":[{"name":"Spom972h-yjjK","type":"exact"}],"termid":"PR:Q9USH9"}


id: GO:0051274
data:
  {"annotated_genes":["SJAG_01255","SJAG_04073","SJAG_03587","SJAG_04771","SJAG_02446","SJAG_00610","SJAG_02590","SJAG_01453","SJAG_04483","SJAG_04509","SJAG_04659","SJAG_03123","SJAG_01288","SJAG_05285","SJAG_04462","SJAG_01787","SJAG_04666","SJAG_00876","SJAG_03705","SJAG_00218","SJAG_01835","SJAG_02222","SJAG_01290","SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78577,76948,64269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[96352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[74759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[74762,72816,117822,108058,93480,76281,77632,115155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[104574,80002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[89369,94302],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[89752],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[94286,69405,107293,119921,120054,107867,92643],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-glucans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan biosynthetic process","termid":"GO:0009250"},{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"beta-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"beta-glucan anabolism","type":"exact"},{"name":"beta-glucan biosynthesis","type":"exact"},{"name":"beta-glucan formation","type":"exact"},{"name":"beta-glucan synthesis","type":"exact"}],"termid":"GO:0051274","terms_by_termid":{"GO:0006078":null,"GO:0032951":null,"GO:0034412":null,"GO:0034413":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0117164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CELF2 antisense RNA 3","termid":"PBO:0117164"}


id: FYPO:0004809
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of heterochromatin maintenance is shorter than normal in the context of chromatin silencing at centromere outer repeat regions.","definition_xrefs":["GO:0070829","PomBase:mah","PMID:25543137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased duration of heterochromatin maintenance","termid":"FYPO:0008366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000641","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at centromere outer repeat","synonyms":[{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at centromere otr","type":"exact"},{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at pericentric region","type":"related"},{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at pericentromeric region","type":"related"},{"name":"reduced duration of heterochromatin maintenance involved in chromatin silencing at centromere outer repeat","type":"exact"}],"termid":"FYPO:0004809"}


id: PBO:0081026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 7B","termid":"PBO:0081026"}


id: GO:0018422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of mannose-1-phosphate to a serine residue in a protein.","definition_xrefs":["PMID:10037765","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016780","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"GDP-mannose:serine-protein mannose-1-phosphotransferase activity","termid":"GO:0018422"}


id: GO:0006802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The processes involved in the induction or activation of catalase, an enzyme that catalyzes the conversion of H2O2 into H2O.","definition_xrefs":["GOC:jl","PMID:11245904"],"gene_count":0,"genotype_count":0,"name":"obsolete catalase reaction (obsolete GO:0006802)","synonyms":[{"name":"catalase reaction","type":"exact"},{"name":"hydroperoxidase reaction","type":"related"}],"termid":"GO:0006802"}


id: GO:0070225
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogen sulfide + oxidized cytochrome c = S + reduced cytochrome c.","definition_xrefs":["RHEA:30223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, cytochrome as acceptor","termid":"GO:0016669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"sulfide dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-8156","EC:1.8.2.3"],"synonyms":[{"name":"flavocytochrome c sulfide dehydrogenase activity","type":"exact"},{"name":"sulphide dehydrogenase activity","type":"exact"}],"termid":"GO:0070225"}


id: PBO:0087443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit H of the V1 peripheral membrane domain of V-ATPase; part of the electrogenic proton pump found throughout the endomembrane system; serves as an activator or a structural stabilizer of the V-ATPase; the V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase) has eight subunits","termid":"PBO:0087443"}


id: MONDO:1010515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Triploidy that occurs in blue-and-yellow macaw.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"triploidy, non-human animal","termid":"MONDO:1010031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triploidy, blue-and-yellow macaw","secondary_identifiers":["OMIA:001180-9226"],"termid":"MONDO:1010515","xrefs":{"Monarch":{"xref_id":"1010515"}}}


id: GO:1905418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of amoeboid sperm motility.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:krc","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amoeboid sperm motility","termid":"GO:1905416"},{"relation_name":"is_a","term_name":"positive regulation of cell motility","termid":"GO:2000147"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"amoeboid sperm motility","termid":"GO:0097723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amoeboid sperm motility","synonyms":[{"name":"activation of ameboid sperm motility","type":"narrow"},{"name":"activation of ameboid sperm movement","type":"narrow"},{"name":"activation of amoeboid sperm motility","type":"narrow"},{"name":"activation of amoeboid sperm movement","type":"narrow"},{"name":"positive regulation of ameboid sperm motility","type":"exact"},{"name":"positive regulation of ameboid sperm movement","type":"exact"},{"name":"positive regulation of amoeboid sperm movement","type":"exact"},{"name":"up regulation of ameboid sperm motility","type":"exact"},{"name":"up regulation of ameboid sperm movement","type":"exact"},{"name":"up regulation of amoeboid sperm motility","type":"exact"},{"name":"up regulation of amoeboid sperm movement","type":"exact"},{"name":"up-regulation of ameboid sperm motility","type":"exact"},{"name":"up-regulation of ameboid sperm movement","type":"exact"},{"name":"up-regulation of amoeboid sperm motility","type":"exact"},{"name":"up-regulation of amoeboid sperm movement","type":"exact"},{"name":"upregulation of ameboid sperm motility","type":"exact"},{"name":"upregulation of ameboid sperm movement","type":"exact"},{"name":"upregulation of amoeboid sperm motility","type":"exact"},{"name":"upregulation of amoeboid sperm movement","type":"exact"}],"termid":"GO:1905418"}


id: GO:0019319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hexose, any monosaccharide with a chain of six carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"},{"relation_name":"is_a","term_name":"monosaccharide biosynthetic process","termid":"GO:0046364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"hexose biosynthetic process","synonyms":[{"name":"hexose anabolism","type":"exact"},{"name":"hexose biosynthesis","type":"exact"},{"name":"hexose formation","type":"exact"},{"name":"hexose synthesis","type":"exact"}],"termid":"GO:0019319"}


id: GO:0003686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA repair enzyme (obsolete GO:0003686)","synonyms":[{"name":"DNA repair enzyme","type":"exact"}],"termid":"GO:0003686"}


id: PBO:0069387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 647, pseudogene","termid":"PBO:0069387"}


id: PBO:0043770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor COX19","termid":"PBO:0043770"}


id: PBO:0083250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0083250"}


id: PBO:0072734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate receptor 4","termid":"PBO:0072734"}


id: GO:1900885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tridecane biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tridecane biosynthetic process","termid":"GO:1900884"},{"relation_name":"is_a","term_name":"negative regulation of tridecane metabolic process","termid":"GO:1900894"},{"relation_name":"is_a","term_name":"negative regulation of alkane biosynthetic process","termid":"GO:1901578"},{"relation_name":"negatively_regulates","term_name":"tridecane biosynthetic process","termid":"GO:1900632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tridecane biosynthetic process","synonyms":[{"name":"down regulation of tridecane anabolism","type":"exact"},{"name":"down regulation of tridecane biosynthesis","type":"exact"},{"name":"down regulation of tridecane biosynthetic process","type":"exact"},{"name":"down regulation of tridecane formation","type":"exact"},{"name":"down regulation of tridecane synthesis","type":"exact"},{"name":"down-regulation of tridecane anabolism","type":"exact"},{"name":"down-regulation of tridecane biosynthesis","type":"exact"},{"name":"down-regulation of tridecane biosynthetic process","type":"exact"},{"name":"down-regulation of tridecane formation","type":"exact"},{"name":"down-regulation of tridecane synthesis","type":"exact"},{"name":"downregulation of tridecane anabolism","type":"exact"},{"name":"downregulation of tridecane biosynthesis","type":"exact"},{"name":"downregulation of tridecane biosynthetic process","type":"exact"},{"name":"downregulation of tridecane formation","type":"exact"},{"name":"downregulation of tridecane synthesis","type":"exact"},{"name":"inhibition of tridecane anabolism","type":"narrow"},{"name":"inhibition of tridecane biosynthesis","type":"narrow"},{"name":"inhibition of tridecane biosynthetic process","type":"narrow"},{"name":"inhibition of tridecane formation","type":"narrow"},{"name":"inhibition of tridecane synthesis","type":"narrow"},{"name":"negative regulation of tridecane anabolism","type":"exact"},{"name":"negative regulation of tridecane biosynthesis","type":"exact"},{"name":"negative regulation of tridecane formation","type":"exact"},{"name":"negative regulation of tridecane synthesis","type":"exact"}],"termid":"GO:1900885"}


id: PBO:0069374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 634, pseudogene","termid":"PBO:0069374"}


id: PBO:0080264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 27 pseudogene","termid":"PBO:0080264"}


id: GO:0005630
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outermost layer of the spore wall, as described in Saccharomyces.","definition_xrefs":["ISBN:0879693568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ascospore wall","termid":"GO:0005619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"dityrosine layer of spore wall","termid":"GO:0005630"}


id: GO:0098605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-Serine + Selenohomocysteine => L-Selenocystathionine + H2O.","definition_xrefs":["PMID:6456763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"selenocystathionine beta-synthase activity","secondary_identifiers":["Reactome:R-HSA-2408559"],"termid":"GO:0098605"}


id: PBO:0052304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA0040","termid":"PBO:0052304"}


id: GO:0016781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of two phosphate groups from a donor, such as ATP, to two different acceptors.","definition_xrefs":["EC:2.7.9.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring phosphorus-containing groups","termid":"GO:0016772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"phosphotransferase activity, paired acceptors","termid":"GO:0016781"}


id: PBO:0065270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 32","termid":"PBO:0065270"}


id: PBO:0069711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 991, pseudogene","termid":"PBO:0069711"}


id: GO:0001304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that results in changes in chromatin structure contributing to replicative cell aging.","definition_xrefs":["GOC:tb","GOC:jh","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete progressive alteration of chromatin involved in replicative cell aging (obsolete GO:0001304)","synonyms":[{"name":"progressive alteration of chromatin during replicative cell ageing","type":"exact"},{"name":"progressive alteration of chromatin during replicative cell aging","type":"related"}],"termid":"GO:0001304"}


id: FYPO:0000391
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which traversing the start control point of the mitotic cell cycle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal passage through START of mitotic cell cycle","synonyms":[{"name":"cell cycle passage through START: normal","type":"related"},{"name":"normal mitotic cell cycle passage through START","type":"exact"},{"name":"normal passage through START of mitotic cell cycle during vegetative growth","type":"exact"}],"termid":"FYPO:0000391"}


id: PBO:0003604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Sed5 (predicted)","termid":"PBO:0003604"}


id: MONDO:0014617
data:
  {"annotated_genes":["SJAG_02180","SJAG_01851","SJAG_04157"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87120,87121,87122],"is_not":false,"summary":null,"term":"MONDO:0014617"}]},"cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the EEF1A2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01851":null,"SJAG_02180":null,"SJAG_04157":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 38","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4225343","OMIM:616393","GARD:16469","DOID:0070068","MEDGEN:895359"],"synonyms":[{"name":"EEF1A2 autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"MRD38","type":"exact"},{"name":"PRELDS","type":"exact"},{"name":"autosomal dominant intellectual disability 38","type":"exact"},{"name":"autosomal dominant mental retardation 38","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 38","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in EEF1A2","type":"exact"},{"name":"intellectual disability, autosomal dominant 38","type":"exact"},{"name":"intellectual disability, autosomal dominant type 38","type":"exact"},{"name":"mental retardation, autosomal dominant 38","type":"related"},{"name":"mental retardation, autosomal dominant type 38","type":"exact"},{"name":"psychomotor retardation, epilepsy, and language disability syndrome","type":"exact"}],"termid":"MONDO:0014617","terms_by_termid":{"MONDO:0014617":null},"xrefs":{"Monarch":{"xref_id":"0014617"}}}


id: GO:1901450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to butan-1-ol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to alcohol","termid":"GO:1901421"},{"relation_name":"is_a","term_name":"regulation of response to butan-1-ol","termid":"GO:1901448"},{"relation_name":"positively_regulates","term_name":"response to butan-1-ol","termid":"GO:1901422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to butan-1-ol","synonyms":[{"name":"activation of response to butan-1-ol","type":"narrow"},{"name":"up regulation of response to butan-1-ol","type":"exact"},{"name":"up-regulation of response to butan-1-ol","type":"exact"},{"name":"upregulation of response to butan-1-ol","type":"exact"}],"termid":"GO:1901450"}


id: PBO:0116597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HTRA1 and ARMS2 antisense RNA 1","termid":"PBO:0116597"}


id: GO:1901191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of formation of translation initiation ternary complex.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"negative regulation of translational initiation","termid":"GO:0045947"},{"relation_name":"is_a","term_name":"regulation of formation of translation initiation ternary complex","termid":"GO:1901190"},{"relation_name":"negatively_regulates","term_name":"formation of translation initiation ternary complex","termid":"GO:0001677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"negative regulation of formation of translation initiation ternary complex","synonyms":[{"name":"down regulation of formation of translation initiation ternary complex","type":"exact"},{"name":"down regulation of translation initiation ternary complex assembly","type":"exact"},{"name":"down-regulation of formation of translation initiation ternary complex","type":"exact"},{"name":"down-regulation of translation initiation ternary complex assembly","type":"exact"},{"name":"downregulation of formation of translation initiation ternary complex","type":"exact"},{"name":"downregulation of translation initiation ternary complex assembly","type":"exact"},{"name":"inhibition of formation of translation initiation ternary complex","type":"narrow"},{"name":"inhibition of translation initiation ternary complex assembly","type":"exact"},{"name":"negative regulation of translation initiation ternary complex assembly","type":"exact"}],"termid":"GO:1901191"}


id: MONDO:0007448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial dermographism is a condition also known as skin writing. When people who have dermatographia lightly scratch their skin, the scratches redden into a raised wheal similar to hives. Signs and symptoms of dermatographia include raised red lines, swelling, inflammation, hive-like welts and itching. Symptoms usually disappear within 30 minutes. The exact cause of this condition is unknown. Treatment may involve use of antihistamines if symptoms do not go away on their own.","definition_xrefs":["GARD:0009480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical urticaria","termid":"MONDO:0006599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial dermatographia","secondary_identifiers":["MESH:C536612","OMIM:125635","MEDGEN:342170","ICD10CM:L50.3","UMLS:C1852145","SCTID:7632005","ICD9:708.3","DOID:743","EFO:1000685"],"synonyms":[{"name":"DDU","type":"related"},{"name":"Dermatographism, familial","type":"related"},{"name":"Dermodistortive urticaria","type":"related"},{"name":"VBU","type":"related"},{"name":"dermatographia","type":"related"},{"name":"dermatographic urticaria","type":"exact"},{"name":"dermo-distortive urticaria","type":"related"},{"name":"dermographism","type":"exact"},{"name":"dermographism, familial","type":"related"},{"name":"familial dermatographism","type":"related"},{"name":"familial dermographism","type":"related"},{"name":"vibratory angioedema","type":"related"},{"name":"vibratory urticaria","type":"related"}],"termid":"MONDO:0007448","xrefs":{"Monarch":{"xref_id":"0007448"}}}


id: MONDO:0019683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndactyly type 2 (obsolete MONDO:0019683)","termid":"MONDO:0019683","xrefs":{"Monarch":{"xref_id":"0019683"}}}


id: GO:0000199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase in the context of cell wall biogenesis, the assembly and arrangement of the cell wall, the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPK activity involved in cell wall organization or biogenesis (obsolete GO:0000199)","synonyms":[{"name":"activation of MAPK activity involved in cell wall biogenesis","type":"narrow"},{"name":"activation of MAPK activity involved in cell wall integrity","type":"exact"},{"name":"cell wall biogenesis, activation of MAPK activity","type":"exact"}],"termid":"GO:0000199"}


id: PBO:0003003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidase (predicted)","termid":"PBO:0003003"}


id: GO:0102989
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3 H+ + 9,12,15-cis-hexadecatrienoyl-CoA + 3 malonyl-CoA(5-) = 5-(pentadeca-8,11,14-trien-1-yl)resorcinol + 4 coenzyme A + 4 carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-pentadecatrienylresorcinol synthase activity (obsolete GO:0102989)","termid":"GO:0102989"}


id: GO:0009469
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete class II cytochrome c (obsolete GO:0009469)","synonyms":[{"name":"class II cytochrome c","type":"exact"}],"termid":"GO:0009469"}


id: GO:0032763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mast cell cytokine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production involved in immune response","termid":"GO:0002718"},{"relation_name":"regulates","term_name":"mast cell cytokine production","termid":"GO:0032762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of mast cell cytokine production","termid":"GO:0032763"}


id: PBO:0051275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-5","termid":"PBO:0051275"}


id: MONDO:0006071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm characterized by the presence of connective tissue stroma and epithelial structures. It occurs in the ovary, fallopian tube, uterine corpus, and cervix. Cases of adenofibroma of the ovary with low grade malignant potential have also been reported.","definition_xrefs":["NCIT:C8984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign female reproductive system neoplasm","termid":"MONDO:0000624"},{"relation_name":"is_a","term_name":"fibroma","termid":"MONDO:0005167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenofibroma","secondary_identifiers":["MESH:D000232","UMLS:C0001422","ICDO:9013/0","EFO:1000070","DOID:2683","MEDGEN:1325"],"synonyms":[{"name":"adenofibroma, benign","type":"exact"},{"name":"adenofibroma, no ICD-O subtype","type":"exact"},{"name":"adenofibroma, no ICD-O subtype (morphologic abnormality)","type":"exact"},{"name":"benign mixed Muellerian tumor","type":"exact"},{"name":"benign mixed Muellerian tumour","type":"exact"},{"name":"female reproductive system adenofibroma","type":"exact"}],"termid":"MONDO:0006071","xrefs":{"Monarch":{"xref_id":"0006071"}}}


id: PBO:0047556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGF12 antisense RNA 1","termid":"PBO:0047556"}


id: PBO:0087769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of tRNA-specific adenosine-34 deaminase; forms a heterodimer with Tad3p that converts adenosine to inosine at the wobble position of several tRNAs","termid":"PBO:0087769"}


id: MONDO:0957955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"},{"relation_name":"is_a","term_name":"megaloblastic anemia-immunodeficiency due to folate transporter 1 deficiency","termid":"MONDO:0971066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 114, folate-responsive","secondary_identifiers":["MEDGEN:1848890","OMIM:620603","UMLS:C5882719"],"termid":"MONDO:0957955","xrefs":{"Monarch":{"xref_id":"0957955"}}}


id: GO:0060432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within the lung, to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung pattern specification process","termid":"GO:0060432"}


id: PBO:0059593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 5","termid":"PBO:0059593"}


id: PBO:0016110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial acylglycerol lipase Mgl1 (predicted)","termid":"PBO:0016110"}


id: MONDO:0017200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycystic ovaries-urethral sphincter dysfunction syndrome is characterized by urinary retention and incomplete emptying of the bladder associated with abnormal electromyographic activity. It has been described in 33 women, 14 of whom also had polycystic ovaries.","definition_xrefs":["Orphanet:2795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic ovaries-urethral sphincter dysfunction syndrome","secondary_identifiers":["GARD:2365","MEDGEN:419813","UMLS:C2931462","MESH:C537271"],"synonyms":[{"name":"fowler Christmas Chapple syndrome","type":"related"},{"name":"fowler's syndrome","type":"related"},{"name":"fowler-Christmas-Chapple syndrome","type":"exact"},{"name":"polycystic ovaries urethral sphincter dysfunction","type":"related"},{"name":"voiding dysfunction and polycystic ovaries","type":"related"}],"termid":"MONDO:0017200","xrefs":{"Monarch":{"xref_id":"0017200"}}}


id: GO:0033791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oyl-CoA + H2O + acceptor = (24R,25R)-3alpha,7alpha,12alpha,24-tetrahydroxy-5beta-cholestan-26-oyl-CoA + reduced acceptor.","definition_xrefs":["EC:1.17.99.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA 24-hydroxylase activity","secondary_identifiers":["MetaCyc:1.17.99.3-RXN","RHEA:15733"],"synonyms":[{"name":"(25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oyl-CoA:acceptor 24-oxidoreductase (24R-hydroxylating) activity","type":"related"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oate 24-hydroxylase activity","type":"related"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA oxidase activity","type":"related"},{"name":"THC-CoA oxidase activity","type":"related"},{"name":"THCA-CoA oxidase activity","type":"related"},{"name":"trihydroxycoprostanoyl-CoA oxidase activity","type":"related"}],"termid":"GO:0033791"}


id: PR:O42654
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC10F6.15 gene.","definition_xrefs":["UniProtKB:O42654","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 134 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.15","synonyms":[{"name":"Spom972h-SPAC10F6.15","type":"exact"}],"termid":"PR:O42654"}


id: GO:0052341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of pectin in the cell wall of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by organism of cell wall pectin in other organism involved in symbiotic interaction (obsolete GO:0052341)","synonyms":[{"name":"catabolism by organism of cell wall pectin in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052341"}


id: PBO:0013072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Prp38","termid":"PBO:0013072"}


id: GO:0070955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the directed killing of a symbiont target cell by a neutrophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to biotic stimulus","termid":"GO:0002832"},{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"negative regulation of killing of cells of another organism","termid":"GO:0051711"},{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070949"},{"relation_name":"is_a","term_name":"negative regulation of neutrophil mediated cytotoxicity","termid":"GO:0070954"},{"relation_name":"negatively_regulates","term_name":"neutrophil-mediated killing of symbiont cell","termid":"GO:0070943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil mediated killing of symbiont cell","synonyms":[{"name":"down regulation of neutrophil mediated killing of symbiont cell","type":"exact"},{"name":"down-regulation of neutrophil mediated killing of symbiont cell","type":"exact"},{"name":"downregulation of neutrophil mediated killing of symbiont cell","type":"exact"},{"name":"inhibition of neutrophil mediated killing of symbiont cell","type":"narrow"}],"termid":"GO:0070955"}


id: PBO:0029043
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_6,7-dimethyl-8-ribityllumazine_synthase_activity","termid":"PBO:0029043"}


id: PBO:0059432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A3","termid":"PBO:0059432"}


id: PBO:0054464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1863","termid":"PBO:0054464"}


id: PBO:0038435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylacetamide deacetylase like 2","termid":"PBO:0038435"}


id: MONDO:0957543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"auriculocondylar syndrome","termid":"MONDO:0000107"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"auriculocondylar syndrome 4","secondary_identifiers":["OMIM:620457","MEDGEN:1841295","UMLS:C5830659"],"termid":"MONDO:0957543","xrefs":{"Monarch":{"xref_id":"0957543"}}}


id: GO:0000111
data:
  {"annotated_genes":["SJAG_01887","SJAG_01049"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73908,74417],"is_not":false,"summary":null,"term":"GO:0000111"}]},"cv_name":"cellular_component","definition":"One of several protein complexes involved in nucleotide-excision repair; possesses damaged DNA binding activity. In S. cerevisiae, it is composed of Rad4p and Rad23p.","definition_xrefs":["PMID:10915862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01049":null,"SJAG_01887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nucleotide-excision repair factor 2 complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"NEF2 complex","type":"exact"}],"termid":"GO:0000111","terms_by_termid":{"GO:0000111":null}}


id: GO:1900275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of phospholipase C activity.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phospholipase C activity (obsolete GO:1900275)","synonyms":[{"name":"down regulation of lecithinase C activity","type":"related"},{"name":"down regulation of lipophosphodiesterase C","type":"related"},{"name":"down regulation of phosphatidase C","type":"related"},{"name":"down regulation of phospholipase C activity","type":"exact"},{"name":"down-regulation of lecithinase C activity","type":"related"},{"name":"down-regulation of lipophosphodiesterase C","type":"related"},{"name":"down-regulation of phosphatidase C","type":"related"},{"name":"down-regulation of phospholipase C activity","type":"exact"},{"name":"downregulation of lecithinase C activity","type":"related"},{"name":"downregulation of lipophosphodiesterase C","type":"related"},{"name":"downregulation of phosphatidase C","type":"related"},{"name":"downregulation of phospholipase C activity","type":"exact"},{"name":"inhibition of lecithinase C activity","type":"related"},{"name":"inhibition of lipophosphodiesterase C","type":"related"},{"name":"inhibition of phosphatidase C","type":"related"},{"name":"inhibition of phospholipase C activity","type":"narrow"},{"name":"negative regulation of lecithinase C activity","type":"related"},{"name":"negative regulation of lipophosphodiesterase C","type":"related"},{"name":"negative regulation of phosphatidase C","type":"related"}],"termid":"GO:1900275"}


id: GO:0002362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a CD4-positive, alpha-beta T cell becomes committed to becoming a CD4-positive, CD25-positive, alpha-beta regulatory T cell.","definition_xrefs":["GOC:add","PMID:15207821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell lineage commitment","termid":"GO:0043373"},{"relation_name":"part_of","term_name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","termid":"GO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell lineage commitment","synonyms":[{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T lymphocyte lineage commitment","type":"exact"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T-cell lineage commitment","type":"exact"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T-lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0002362"}


id: PBO:0049788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 23","termid":"PBO:0049788"}


id: PBO:0043007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich hydrophobic domain 2","termid":"PBO:0043007"}


id: GO:0052666
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing 2'-O-methylcytosine.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA (cytosine-2'-O-)-methyltransferase activity (obsolete GO:0052666)","synonyms":[{"name":"S-adenosyl-L-methionine:tRNA (cytosine-2'-O-)-methyltransferase activity","type":"exact"},{"name":"S-adenosyl-L-methionine:tRNA cytosine-2'-O-methyltransferase activity","type":"exact"},{"name":"tRNA (cytosine 2')-methyltransferase activity","type":"exact"},{"name":"tRNA cytosine 2'-methyltransferase activity","type":"exact"},{"name":"tRNA cytosine-2'-O-methyltransferase activity","type":"exact"},{"name":"transfer ribonucleate cytosine 2'-methyltransferase activity","type":"exact"}],"termid":"GO:0052666"}


id: MONDO:0800350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"left ventricular noncompaction","termid":"MONDO:0018901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"left ventricular noncompaction 4","secondary_identifiers":["UMLS:C3150682","MEDGEN:462032"],"synonyms":[{"name":"LVNC4","type":"exact"}],"termid":"MONDO:0800350","xrefs":{"Monarch":{"xref_id":"0800350"}}}


id: PBO:0003015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent malic enzyme (predicted), partial","termid":"PBO:0003015"}


id: MONDO:0002753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mucinous stomach adenocarcinoma (obsolete MONDO:0002753)","termid":"MONDO:0002753","xrefs":{"Monarch":{"xref_id":"0002753"}}}


id: FYPO:0001991
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that dies without completing cell division.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination","termid":"FYPO:0000316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, without cell division","synonyms":[{"name":"inviable after spore germination, no cell division","type":"exact"},{"name":"inviable following spore germination, without cell division","type":"exact"},{"name":"inviable germinated spore, without cell division","type":"exact"},{"name":"lethal after spore germination, without cell division","type":"exact"}],"termid":"FYPO:0001991"}


id: GO:0048788
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The specialized cytoskeletal matrix of the presynaptic active zone. It has specialized functions in organizing synaptic events such as immobilisation or translocation of synaptic vesicles, and assembling active zone components. It is believed to form a molecular scaffold that organizes neurotransmitter release sites.","definition_xrefs":["NIF_Subcellular:sao1470121605","PMID:10944438","GOC:dl","GOC:ef","GOC:jid","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical cytoskeleton","termid":"GO:0030863"},{"relation_name":"is_a","term_name":"presynaptic cytoskeleton","termid":"GO:0099569"},{"relation_name":"part_of","term_name":"presynaptic active zone cytoplasmic component","termid":"GO:0098831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005938"],"is_obsolete":false,"name":"cytoskeleton of presynaptic active zone","synonyms":[{"name":"CAZ","type":"narrow"},{"name":"T-bar","type":"narrow"},{"name":"T-bar ribbon","type":"narrow"},{"name":"active zone cytomatrix","type":"exact"},{"name":"pre-synaptic cytoskeletal matrix assembled at active zones","type":"exact"},{"name":"pre-synaptic dense body","type":"narrow"},{"name":"pre-synaptic ribbon","type":"related"},{"name":"presynaptic cytomatrix assembled at active zones","type":"exact"},{"name":"presynaptic cytoskeletal matrix","type":"exact"},{"name":"presynaptic cytoskeletal matrix assembled at active zones","type":"exact"},{"name":"presynaptic dense body","type":"narrow"},{"name":"presynaptic ribbon","type":"related"},{"name":"ribbon","type":"related"},{"name":"synaptic ribbon","type":"narrow"}],"termid":"GO:0048788"}


id: PR:O60097
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spt8 gene.","definition_xrefs":["UniProtKB:O60097","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor spt8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.17c","synonyms":[{"name":"Spom972h-spt8","type":"exact"}],"termid":"PR:O60097"}


id: PBO:0061363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 23","termid":"PBO:0061363"}


id: GO:0031616
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A centrosome from which one pole of a mitotic or meiotic spindle is organized.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centrosome","termid":"GO:0005813"},{"relation_name":"part_of","term_name":"spindle pole","termid":"GO:0000922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"spindle pole centrosome","termid":"GO:0031616"}


id: SO:0000054
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of chromosome variation where the chromosome complement is not an exact multiple of the haploid number.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_number_variation","termid":"SO:1000182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneuploid","secondary_identifiers":["http://en.wikipedia.org/wiki/Aneuploid"],"termid":"SO:0000054"}


id: PBO:0069058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 304, pseudogene","termid":"PBO:0069058"}


id: GO:0008953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: penicillin + H2O = a carboxylate + 6-aminopenicillanate.","definition_xrefs":["EC:3.5.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"penicillin amidase activity","secondary_identifiers":["RHEA:18693","MetaCyc:PENICILLIN-AMIDASE-RXN"],"synonyms":[{"name":"alpha-acylamino-beta-lactam acylhydrolase activity","type":"related"},{"name":"ampicillin acylase activity","type":"related"},{"name":"benzylpenicillin acylase activity","type":"related"},{"name":"novozym 217","type":"related"},{"name":"palmitoleoyl [acyl-carrier protein]-dependent acyltransferase activity","type":"exact"},{"name":"penicillin acylase activity","type":"related"},{"name":"penicillin amidohydrolase activity","type":"related"},{"name":"semacylase activity","type":"related"}],"termid":"GO:0008953"}


id: GO:1904939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA nucleotidylexotransferase activity.","definition_xrefs":["GO_REF:0000059","GOC:BHF","PMID:23575307","GOC:TermGenie","GOC:bc","GOC:BHF_miRNA"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA nucleotidylexotransferase activity (obsolete GO:1904939)","synonyms":[{"name":"regulation of TdT","type":"related"},{"name":"regulation of addase activity","type":"exact"},{"name":"regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"regulation of terminal addition enzyme activity","type":"related"},{"name":"regulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"regulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"regulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"regulation of terminal transferase activity","type":"exact"}],"termid":"GO:1904939"}


id: MONDO:0005351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder most often seen in adolescent females characterized by a refusal to maintain a minimally normal body weight, an intense fear of gaining weight, a disturbance in body image, and, in postmenarcheal females, the development of amenorrhea.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eating disorder","termid":"MONDO:0005451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anorexia nervosa","secondary_identifiers":["ICD10CM:F50.0","Orphanet:36297","SCTID:56882008","DOID:8689","NCIT:C34387","icd11.foundation:263852475","ICD9:307.1","MEDGEN:316","MESH:D000856","UMLS:C0003125"],"termid":"MONDO:0005351","xrefs":{"Monarch":{"xref_id":"0005351"}}}


id: PBO:0082393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of C-terminal domain kinase I (CTDK-I); which phosphorylates both RNA pol II subunit Rpo21p to affect transcription and pre-mRNA 3' end processing, and ribosomal protein Rps2p to increase translational fidelity; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082393"}


id: MONDO:0023158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fitz-Hugh-Curtis syndrome (FHCS) is a condition in which a woman has swelling of the tissue covering the liver as a result of having pelvic inflammatory disease (PID). Symptoms most often include pain in the upper right abdomen just below the ribs, fever, nausea, or vomiting. The symptoms of pelvic inflammatory disease - pain in the lower abdomen and vaginal discharge -are oftenpresent as well. FHCS is usually caused by an infection of chlamydia or gonorrhea that leads to PID; it is not known why PIDprogresses toFHCS in some women. Fitz-Hugh-Curtis syndrome is treatedwith antibiotics.","definition_xrefs":["GARD:0006452"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"chlamydia infectious disease","termid":"MONDO:0021697"},{"relation_name":"is_a","term_name":"pelvic inflammatory disease","termid":"MONDO:0000922"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fitz-Hugh-Curtis syndrome","secondary_identifiers":["MEDGEN:639814","SCTID:237041005","MESH:C537936","UMLS:C0549148"],"synonyms":[{"name":"gonococcal perihepatitis","type":"narrow"},{"name":"perihepatitis syndrome","type":"related"}],"termid":"MONDO:0023158","xrefs":{"Monarch":{"xref_id":"0023158"}}}


id: GO:0019507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyridine, a nitrogenous base (C5H5N) obtained from the distillation of bone oil or coal tar, and by the decomposition of certain alkaloids, as a colorless liquid with a peculiar pungent odor.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyridine metabolic process","synonyms":[{"name":"pyridine metabolism","type":"exact"}],"termid":"GO:0019507"}


id: FYPO:0003680
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing epirubicin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002060","FYPO:0000257","FYPO:0000139","FYPO:0002057","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on epirubicin","synonyms":[{"name":"normal cell population growth in presence of epirubicin","type":"exact"},{"name":"normal cell population growth on 4'-epidoxorubicin","type":"exact"},{"name":"normal cell population growth on epirubicin","type":"exact"},{"name":"normal cellular response to epirubicin","type":"related"},{"name":"normal vegetative cell population growth on epirubicin","type":"exact"}],"termid":"FYPO:0003680"}


id: MOD:00198
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to D-alanine.","definition_xrefs":["PubMed:7287302","RESID:AA0191#ALA","PubMed:7961627","PubMed:15023056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 71.037114 Da","termid":"MOD:00570"},{"relation_name":"is_a","term_name":"D-alanine","termid":"MOD:00862"},{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-alanine (Ala)","synonyms":[{"name":"(R)-2-aminopropanoic acid","type":"exact"},{"name":"D-Ala(Ala)","type":"exact"},{"name":"D-alanine","type":"exact"},{"name":"MOD_RES D-alanine (Ala)","type":"exact"}],"termid":"MOD:00198"}


id: MONDO:0010503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Bartter syndrome in which the cause of the disease is a mutation in the MAGED2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bartter syndrome","termid":"MONDO:0015231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Bartter disease type 5","secondary_identifiers":["OMIM:300971","GARD:22308","Orphanet:570371","DOID:0110147","MEDGEN:934787","UMLS:C4310820"],"synonyms":[{"name":"BARTS5","type":"exact"},{"name":"Bartter syndrome caused by mutation in MAGED2","type":"exact"},{"name":"Bartter syndrome, type 5, antenatal, transient","type":"exact"},{"name":"Bartter syndrome, type 5, antenatal, transient, X-linked recessive","type":"exact"},{"name":"MAGED2 Bartter syndrome","type":"exact"}],"termid":"MONDO:0010503","xrefs":{"Monarch":{"xref_id":"0010503"}}}


id: MONDO:0014142
data:
  {"annotated_genes":["SJAG_03188"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87771],"is_not":false,"summary":null,"term":"MONDO:0014142"}]},"cv_name":"mondo","definition":"Autosomal recessive limb-girdle muscular dystrophy type 2T (LGMD2T) is a form of limb-girdle muscular dystrophy, that can present from birth to early childhood, characterized by hypotonia, microcephaly, mild proximal muscle weakness (leading to delayed walking and difficulty climbing stairs), mild intellectual disability and epilepsy. Additional manifestations reported in some patients include cataracts, nystagmus, cardiomyopathy, and respiratory insufficiency.","definition_xrefs":["Orphanet:363623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type C","termid":"MONDO:0000173"},{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"myopathy caused by variation in GMPPB","termid":"MONDO:0700084"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03188":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066","MONDO:0006025","MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2T","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110294","MEDGEN:1377325","GARD:12544","OMIM:615352","UMLS:C4518000"],"synonyms":[{"name":"GMPPB autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"LGMD-GMPPB related","type":"exact"},{"name":"LGMD2T","type":"exact"},{"name":"MDDGC14","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in GMPPB","type":"exact"},{"name":"limb-girdle muscular dystrophy type 2T","type":"related"},{"name":"muscular dystrophy limb-girdle type 2T","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2T","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (limb-girdle) type C14","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (limb-girdle), type C, 14","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy limb-girdle GMPPB-related","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy, limb-girdle, GMPPB-related","type":"related"}],"termid":"MONDO:0014142","terms_by_termid":{"MONDO:0014142":null},"xrefs":{"Monarch":{"xref_id":"0014142"}}}


id: MONDO:0044995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the parasympathetic nervous system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system disorder","termid":"MONDO:0001292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parasympathetic nervous system disorder","secondary_identifiers":["MEDGEN:148205","SCTID:46091002","UMLS:C0750945"],"synonyms":[{"name":"disease of parasympathetic nervous system","type":"exact"},{"name":"disease or disorder of parasympathetic nervous system","type":"exact"},{"name":"disorder of parasympathetic nervous system","type":"exact"},{"name":"parasympathetic nervous system disease","type":"exact"},{"name":"parasympathetic nervous system disease or disorder","type":"exact"}],"termid":"MONDO:0044995","xrefs":{"Monarch":{"xref_id":"0044995"}}}


id: PBO:0054639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2044","termid":"PBO:0054639"}


id: PBO:0050898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha inducible protein 6","termid":"PBO:0050898"}


id: FYPO:0001782
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nucleus is constricted in the middle, resembling a figure 8.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0002403"],"is_obsolete":false,"name":"constricted nucleus","synonyms":[{"name":"constricted nuclei","type":"exact"},{"name":"constricted nucleus during mitotic cell cycle","type":"related"},{"name":"constricted nucleus during vegetative growth","type":"exact"}],"termid":"FYPO:0001782"}


id: GO:0032537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism that are associated with finding a host organism; may include behavioral responses to light, temperature, or chemical emanations from the prospective host.","definition_xrefs":["GOC:pr","GOC:mah","PMID:11931033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host-seeking behavior","synonyms":[{"name":"host-seeking behaviour","type":"exact"}],"termid":"GO:0032537"}


id: PBO:0029540
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores,_germinated_spores_and_spheroid_cells_(obsolete_FYPO:0002182)","termid":"PBO:0029540"}


id: MONDO:0017714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of fatty acid oxidation and ketogenesis","termid":"MONDO:0017713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"acyl-CoA dehydrogenase deficiency","secondary_identifiers":["MEDGEN:541378","UMLS:C0268635","GARD:21318","Orphanet:309120","SCTID:82319005"],"termid":"MONDO:0017714","xrefs":{"Monarch":{"xref_id":"0017714"}}}


id: GO:0036015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-3 stimulus.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-3","synonyms":[{"name":"response to IL-3","type":"exact"}],"termid":"GO:0036015"}


id: MONDO:0020580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A term that refers to germinoma, seminoma, or dysgerminoma.","definition_xrefs":["NCIT:C121618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell tumor","termid":"MONDO:0005040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germinomatous germ cell tumor","secondary_identifiers":["MEDGEN:888719","UMLS:C4054897"],"synonyms":[{"name":"germinomatous germ cell tumor","type":"exact"}],"termid":"MONDO:0020580","xrefs":{"Monarch":{"xref_id":"0020580"}}}


id: PBO:0085808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; encoded within an intron of the mitochondrial COX1 gene; translational initiation codon is predicted to be ATA rather than ATG","termid":"PBO:0085808"}


id: SO:0001339
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N2_N2_7_trimethylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2_N2_7_trimethylguanosine","secondary_identifiers":["RNAMOD:091"],"synonyms":[{"name":"N2,N2,7-trimethylguanosine","type":"exact"},{"name":"m2,2,7G","type":"exact"}],"termid":"SO:0001339"}


id: PBO:0040701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2L1 antisense RNA 1","termid":"PBO:0040701"}


id: GO:0106020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vesicle docking.","definition_xrefs":["PMID:22810233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"vesicle docking","termid":"GO:0048278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0140056"],"is_obsolete":false,"name":"regulation of vesicle docking","synonyms":[{"name":"regulation of vesicle to membrane docking","type":"exact"}],"termid":"GO:0106020"}


id: GO:0055049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart, in the presence of centrosomes.","definition_xrefs":["GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete astral spindle assembly (obsolete GO:0055049)","termid":"GO:0055049"}


id: GO:0060781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of mesenchymal cells, resulting in the expansion of a cell population that contributes to the progression of the prostate gland over time.","definition_xrefs":["GOC:dph","PMID:12221011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"},{"relation_name":"part_of","term_name":"prostate gland development","termid":"GO:0030850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell proliferation involved in prostate gland development","termid":"GO:0060781"}


id: GO:1902196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of isovaleryl-CoA(4-).","definition_xrefs":["GOC:TermGenie","PMID:11231285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"},{"relation_name":"is_a","term_name":"isovaleryl-CoA(4-) metabolic process","termid":"GO:1902195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0006790","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"isovaleryl-CoA(4-) catabolic process","synonyms":[{"name":"isovaleryl-CoA(4-) breakdown","type":"exact"},{"name":"isovaleryl-CoA(4-) catabolism","type":"exact"},{"name":"isovaleryl-CoA(4-) degradation","type":"exact"}],"termid":"GO:1902196"}


id: MONDO:0009156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, congenital limb malformation disorder characterized by hypoplasia or absence of central digital rays of the hands and/or feet and the presence of one or more, unilateral or bilateral, supernumerary digits on postaxial rays, ranging from hypoplastic digits devoid of osseous structures to complete duplication of a digit. Cutaneous syndactyly, symphalangism and clinodactyly have also been reported. There have been no further descriptions in the literature since 1982.","definition_xrefs":["Orphanet:1892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectrodactyly-polydactyly syndrome","secondary_identifiers":["MESH:C565601","UMLS:C1857040","OMIM:225290","GARD:2068","MEDGEN:384042"],"synonyms":[{"name":"ectrodactyly polydactyly","type":"exact"},{"name":"ectrodactyly-polydactyly","type":"exact"}],"termid":"MONDO:0009156","xrefs":{"Monarch":{"xref_id":"0009156"}}}


id: PBO:0090949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit Sen15","termid":"PBO:0090949"}


id: PBO:0074049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 30","termid":"PBO:0074049"}


id: PBO:0117390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like domain 8, phospholipase A2","termid":"PBO:0117390"}


id: GO:0010917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of establishment or extent of a mitochondrial membrane potential, the electric potential existing across any mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of membrane potential","termid":"GO:0045837"},{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane potential","termid":"GO:0051881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial membrane potential","synonyms":[{"name":"reduction of mitochondrial membrane potential","type":"exact"}],"termid":"GO:0010917"}


id: PBO:0090996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atg8-interacting ER-phagy receptor Epr1","termid":"PBO:0090996"}


id: PBO:0087384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol regulatory element binding protein; induces sterol biosynthetic genes, upon sterol depletion; acts as a sterol sensor, binding ergosterol in sterol rich conditions; relocates from intracellular membranes to perinuclear foci upon sterol depletion; redundant activator of filamentation with ECM22, up-regulating the expression of filamentous growth genes; contains a Zn[2]-Cys[6] binuclear cluster; UPC2 has a paralog, ECM22, that arose from the whole genome duplication","termid":"PBO:0087384"}


id: PBO:0088304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear element protein Mug20","termid":"PBO:0088304"}


id: GO:0036254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amiloride stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to amiloride (obsolete GO:0036254)","termid":"GO:0036254"}


id: MONDO:0009268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gaucher disease - ophthalmoplegia - cardiovascular calcification is a variant of Gaucher disease, also known as a Gaucher-like disease that is characterized by cardiac involvement.","definition_xrefs":["Orphanet:2072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Gaucher disease","termid":"MONDO:0018150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0002525","MONDO:0002561"],"is_obsolete":false,"name":"Gaucher disease-ophthalmoplegia-cardiovascular calcification syndrome","secondary_identifiers":["MEDGEN:341563","SCTID:1156813002","UMLS:C1856476","GARD:12504","MESH:C565553","DOID:0112250","OMIM:231005"],"synonyms":[{"name":"Gaucher disease - ophthalmoplegia - cardiovascular calcification","type":"related"},{"name":"Gaucher disease type 3C","type":"exact"},{"name":"Gaucher disease, type 3C","type":"related"},{"name":"Gaucher disease, type IIIC","type":"related"},{"name":"Gaucher disease-ophthalmoplegia-cardiovascular calcification syndrome","type":"exact"},{"name":"Gaucher-like disease","type":"exact"},{"name":"cardiovascular Gaucher disease","type":"exact"},{"name":"pseudo Gaucher disease","type":"related"}],"termid":"MONDO:0009268","xrefs":{"Monarch":{"xref_id":"0009268"}}}


id: MONDO:0017134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Odonto-onycho dysplasia-alopecia syndrome is a rare, genetic ectodermal dysplasia syndrome characterized by almost total alopecia with only sparse, thin, brittle, slow-growing scalp hair, fair and sparse eyebrows and eyelashes, absent axillary and pubic hair, fragile and brittle fingernails, thick and brittle toenails (both with a subungual corneal layer), hypodontia, microdontia, widely spaced teeth with hypoplastic enamel, mild palmoplantar keratosis, cafe-au-lait spots and areolae anomalies. There have been no further descriptions in the literature since 1985.","definition_xrefs":["Orphanet:2722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"odonto-onycho dysplasia-alopecia syndrome","secondary_identifiers":["MEDGEN:1648007","UMLS:C4706599","GARD:4051"],"synonyms":[{"name":"odonto onycho dysplasia with alopecia","type":"related"}],"termid":"MONDO:0017134","xrefs":{"Monarch":{"xref_id":"0017134"}}}


id: GO:0021854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the hypothalamus region of the forebrain, from its initial formation to its mature state.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:dph","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"diencephalon development","termid":"GO:0021536"},{"relation_name":"part_of","term_name":"limbic system development","termid":"GO:0021761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypothalamus development","termid":"GO:0021854"}


id: MONDO:0009520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"3-hydroxy-3-methylglutaric aciduria (3HMG) is an organic aciduria, due to deficiency of 3-hydroxy-3-methylglutaryl-CoA-lyase (a key enzyme in ketogenesis and leucine metabolism) usually presenting in infancy with episodes of metabolic decompensation triggered by periods of fasting or infections, which when left untreated are life-threatening and may lead to neurological sequelae.","definition_xrefs":["Orphanet:20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of fatty acid oxidation and ketogenesis","termid":"MONDO:0017713"},{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"3-hydroxy-3-methylglutaric aciduria","secondary_identifiers":["MESH:C538324","GARD:8387","NANDO:2200497","NANDO:2201119","OMIM:246450","SCTID:410059004","DOID:0070541","UMLS:C0268601","MEDGEN:78692","NCIT:C84523","icd11.foundation:795785192"],"synonyms":[{"name":"3-OH 3-Methyl glutaric aciduria","type":"exact"},{"name":"3-hydroxy-3-methylglutaric aciduria","type":"exact"},{"name":"3-hydroxy-3-methylglutaryl-CoA lyase deficiency","type":"exact"},{"name":"HL deficiency","type":"related"},{"name":"HMG CoA lyase deficiency","type":"related"},{"name":"HMG-CoA lyase deficiency","type":"exact"},{"name":"HMG-Coa lyase deficiency","type":"related"},{"name":"HMGCLD","type":"related"},{"name":"Hmgcl deficiency","type":"related"},{"name":"Hydroxymethylglutaric aciduria","type":"exact"},{"name":"defect in leucine metabolism","type":"related"},{"name":"deficiency of hydroxymethylglutaryl-CoA lyase","type":"exact"},{"name":"hydroxymethylglutaryl-CoA lyase deficiency","type":"exact"}],"termid":"MONDO:0009520","xrefs":{"Monarch":{"xref_id":"0009520"}}}


id: MONDO:0032803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 64","secondary_identifiers":["OMIM:618534","DOID:0111980","MEDGEN:1684716","UMLS:C5231402","GARD:16360"],"synonyms":[{"name":"IMD64","type":"related"},{"name":"IMMUNODEFICIENCY 64","type":"related"}],"termid":"MONDO:0032803","xrefs":{"Monarch":{"xref_id":"0032803"}}}


id: PATO:0001770
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viability quality inhering in a population by virtue of some of it's members' ability to survive.","definition_xrefs":["PATOC:CVC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semi-viable","termid":"PATO:0001770"}


id: PBO:0079214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific serine kinase 6","termid":"PBO:0079214"}


id: GO:0051751
data:
  {"annotated_genes":["SJAG_03115"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180041"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a mannose residue to an oligosaccharide, forming an alpha-(1->4) linkage.","definition_xrefs":["PMID:15772281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03115":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"alpha-1,4-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051751","terms_by_termid":{"GO:0180041":null}}


id: MONDO:0012661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"visceral leishmaniasis","termid":"MONDO:0005445"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"susceptibility to visceral leishmaniasis, 3","secondary_identifiers":["UMLS:C1969648","MEDGEN:370066","OMIM:611382"],"synonyms":[{"name":"KAZA3","type":"related"},{"name":"kala-AZAR, susceptibility to, 3","type":"related"},{"name":"leishmaniasis, visceral, susceptibility to, 3","type":"related"}],"termid":"MONDO:0012661","xrefs":{"Monarch":{"xref_id":"0012661"}}}


id: PBO:0057193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 365b","termid":"PBO:0057193"}


id: PBO:0034171
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_presynaptic_terminal_in","termid":"PBO:0034171"}


id: PBO:0062155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily G member 6 pseudogene","termid":"PBO:0062155"}


id: PBO:0082451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2H2-type zinc finger protein required for ribosome assembly; shuttling factor which associates with pre-60S particles in the nucleus, accompanying them to the cytoplasm; cytoplasmic dissociation of Bud20p requires Drg1p; N-terminus harbors a nuclear localization signal (NLS) and a nuclear export signal (NES); cytoplasmic Bud20p is reimported by Kap123-dependent pathway; involved in bud-site selection; diploid mutants display a random budding pattern; similar to human ZNF593","termid":"PBO:0082451"}


id: MONDO:0024234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Seckel like syndrome majoor-krakauer type","synonyms":[{"name":"Bird-headed dwarfism microcephaly micrognathia","type":"related"}],"termid":"MONDO:0024234","xrefs":{"Monarch":{"xref_id":"0024234"}}}


id: MONDO:0013965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lethal congenital contracture syndrome in which the cause of the disease is a mutation in the MYBPC1 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lethal congenital contracture syndrome","termid":"MONDO:0017436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal congenital contracture syndrome 4","secondary_identifiers":["MEDGEN:766960","DOID:0060654","GARD:12645","OMIM:614915","UMLS:C3554046"],"synonyms":[{"name":"LCCS4","type":"related"},{"name":"MYBPC1 lethal congenital contracture syndrome","type":"exact"},{"name":"lethal congenital contracture syndrome 4","type":"exact"},{"name":"lethal congenital contracture syndrome caused by mutation in MYBPC1","type":"exact"},{"name":"lethal congenital contracture syndrome type 4","type":"exact"}],"termid":"MONDO:0013965","xrefs":{"Monarch":{"xref_id":"0013965"}}}


id: GO:0075131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of protein kinase-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host protein kinase-mediated signal transduction (obsolete GO:0075131)","termid":"GO:0075131"}


id: GO:0016307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + a phosphatidylinositol phosphate = ADP + a phosphatidylinositol bisphosphate.","definition_xrefs":["PMID:9759495"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidylinositol phosphate kinase activity (obsolete GO:0016307)","synonyms":[{"name":"phosphatidylinositol monophosphate kinase activity","type":"exact"}],"termid":"GO:0016307"}


id: GO:0060420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of heart growth. Heart growth is the increase in size or mass of the heart.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organ growth","termid":"GO:0046620"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"heart growth","termid":"GO:0060419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heart growth","termid":"GO:0060420"}


id: FYPO:0003390
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the medial cortex is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"protein mislocalized to medial cortex during vegetative growth","synonyms":[{"name":"ectopic protein localization to medial cortex during vegetative growth","type":"exact"},{"name":"protein mislocalised to medial cortex during vegetative growth","type":"exact"},{"name":"protein mislocalized to medial cortex during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003390"}


id: PBO:0049042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 33","termid":"PBO:0049042"}


id: MONDO:0012412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any classic complement early component deficiency in which the cause of the disease is a mutation in the C7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic complement early component deficiency","termid":"MONDO:0000015"},{"relation_name":"is_a","term_name":"immunodeficiency due to a late component of complement deficiency","termid":"MONDO:0015700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"complement component 7 deficiency","secondary_identifiers":["UMLS:C1864694","MESH:C566443","OMIM:610102","MEDGEN:355270","DOID:0060300","NANDO:2200785","GARD:18290"],"synonyms":[{"name":"C7 classic complement early component deficiency","type":"exact"},{"name":"C7 deficiency","type":"related"},{"name":"C7D","type":"related"},{"name":"classic complement early component deficiency caused by mutation in C7","type":"exact"},{"name":"complement component 7 deficiency","type":"exact"}],"termid":"MONDO:0012412","xrefs":{"Monarch":{"xref_id":"0012412"}}}


id: MONDO:0014883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the FLNC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 26","secondary_identifiers":["OMIM:617047","DOID:0110327","UMLS:C4310749","MEDGEN:934716"],"synonyms":[{"name":"CMH26","type":"exact"},{"name":"FLNC hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy familial hypertrophic 26","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 26","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, type 26","type":"exact"},{"name":"cardiomyopathy, familial restrictive 5","type":"exact"},{"name":"cardiomyopathy, familial restrictive, 5","type":"related"},{"name":"hypertrophic cardiomyopathy caused by mutation in FLNC","type":"exact"},{"name":"hypertrophic cardiomyopathy type 26","type":"exact"}],"termid":"MONDO:0014883","xrefs":{"Monarch":{"xref_id":"0014883"}}}


id: PBO:0086595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression induced during heat stress; YNL019C has a paralog, YNL033W, that arose from a segmental duplication","termid":"PBO:0086595"}


id: GO:0090108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of high-density lipoprotein particle assembly. High-density lipoprotein particle assembly is the aggregation and arrangement of proteins and lipids to form a high-density lipoprotein particle.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of high-density lipoprotein particle assembly","termid":"GO:0090107"},{"relation_name":"positively_regulates","term_name":"high-density lipoprotein particle assembly","termid":"GO:0034380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"positive regulation of high-density lipoprotein particle assembly","termid":"GO:0090108"}


id: MONDO:0002580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm with skeletal muscle differentiation that arises from the orbit.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orbit sarcoma","termid":"MONDO:0004943"},{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"orbit rhabdomyosarcoma","secondary_identifiers":["DOID:3259","MESH:C537605","MEDGEN:83419","SCTID:254994000","NCIT:C4543","UMLS:C0346347"],"synonyms":[{"name":"orbital region rhabdomyosarcoma","type":"exact"},{"name":"orbital region rhabdomyosarcoma (disease)","type":"exact"},{"name":"rhabdomyosarcoma (disease) of orbital region","type":"exact"},{"name":"rhabdomyosarcoma of orbit","type":"exact"},{"name":"rhabdomyosarcoma of the orbit","type":"exact"}],"termid":"MONDO:0002580","xrefs":{"Monarch":{"xref_id":"0002580"}}}


id: GO:2000568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of memory T cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"},{"relation_name":"is_a","term_name":"regulation of memory T cell activation","termid":"GO:2000567"},{"relation_name":"positively_regulates","term_name":"memory T cell activation","termid":"GO:0035709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of memory T cell activation","termid":"GO:2000568"}


id: PATO:0000284
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000284 germ line dependent fertility (obsolete PATO:0000284)","termid":"PATO:0000284"}


id: PBO:0083511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF DES3/YOR264W","termid":"PBO:0083511"}


id: FYPO:0003817
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 5'-3' DNA helicase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abnormal 5'-3' DNA helicase activity","termid":"FYPO:0003817"}


id: GO:0120298
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-noradrenaline + L-glutaminyl-[protein] = 5-(R)-noradrenalinyl-L-glutamyl-[protein] + NH4(+).","definition_xrefs":["GOC:sp","PMID:22858378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"peptide noradrenalinyltransferase activity","secondary_identifiers":["RHEA:66560"],"termid":"GO:0120298"}


id: PBO:0061749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 like export factor 2","termid":"PBO:0061749"}


id: GO:0034460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a uropod by rearrangement of the cytoskeleton and overlying membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uropod organization","termid":"GO:0032796"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"uropod assembly","synonyms":[{"name":"uropod formation","type":"exact"}],"termid":"GO:0034460"}


id: MONDO:0017354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infantile glycine encephalopathy is a mild to severe form of glycine encephalopathy (GE), characterized by early hypotonia, developmental delay and seizures.","definition_xrefs":["Orphanet:289860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine encephalopathy","termid":"MONDO:0011612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"infantile glycine encephalopathy","secondary_identifiers":["MEDGEN:1781124","icd11.foundation:563302182","GARD:17333","UMLS:C5548209","NANDO:1200986"],"synonyms":[{"name":"glycine encephalopathy of infancy","type":"exact"},{"name":"infantile NKH","type":"exact"},{"name":"infantile non-ketotic hyperglycinemia","type":"exact"},{"name":"infantile onset glycine encephalopathy","type":"exact"}],"termid":"MONDO:0017354","xrefs":{"Monarch":{"xref_id":"0017354"}}}


id: GO:0060757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Behavior by which an adult locates food.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"foraging behavior","termid":"GO:0060756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult foraging behavior","termid":"GO:0060757"}


id: PBO:0067367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 468, pseudogene","termid":"PBO:0067367"}


id: PBO:0042447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 effector protein 5","termid":"PBO:0042447"}


id: MONDO:1010192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Central core myopathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myofibrillar myopathy, non-human animal","termid":"MONDO:1010208"},{"relation_name":"is_a","term_name":"congenital nervous system disorder, non-human animal","termid":"MONDO:1011308"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central core myopathy, non-human animal","secondary_identifiers":["OMIA:000172"],"termid":"MONDO:1010192","xrefs":{"Monarch":{"xref_id":"1010192"}}}


id: GO:0021931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of neuroblasts that will give rise to neurons of the lateral pontine nucleus and the locus ceruleus.","definition_xrefs":["PMID:15157725","GO_REF:0000021","GOC:jid","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in external granule layer","termid":"GO:0021924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rostral hindbrain neuronal precursor cell proliferation","termid":"GO:0021931"}


id: PBO:0075339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SORCS3 antisense RNA 1","termid":"PBO:0075339"}


id: PBO:0075093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 142","termid":"PBO:0075093"}


id: PBO:0034739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase Qtrtd1/Qtr2","termid":"PBO:0034739"}


id: MONDO:0006487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoid cystic carcinoma that arises from the vagina. Myoepithelial cells are usually not present.","definition_xrefs":["NCIT:C40261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoid cystic carcinoma","termid":"MONDO:0004971"},{"relation_name":"is_a","term_name":"vaginal adenocarcinoma","termid":"MONDO:0020653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vaginal adenoid cystic carcinoma","secondary_identifiers":["UMLS:C1519912","MEDGEN:274376"],"synonyms":[{"name":"vaginal adenoid cystic cancer","type":"exact"},{"name":"vaginal adenoid cystic carcinoma","type":"exact"}],"termid":"MONDO:0006487","xrefs":{"Monarch":{"xref_id":"0006487"}}}


id: GO:0009215
data:
  {"annotated_genes":["SJAG_00885","SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[109214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009216"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine deoxyribonucleoside triphosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside triphosphate metabolic process","termid":"GO:0009144"},{"relation_name":"is_a","term_name":"deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009200"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine deoxyribonucleoside triphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine deoxyribonucleoside triphosphate metabolism","type":"exact"}],"termid":"GO:0009215","terms_by_termid":{"GO:0009216":null,"GO:0035863":null}}


id: MONDO:0015812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary cutaneous gamma/delta-positive T-cell lymphoma is a rare, usually aggressive, subtype of cutaneous T-cell lymphoma characterized by infiltration of the epidermis, dermis or subcutaneous tissue by a clonal population of mature, gamma/delta positive cytotoxic T-cells. Typically it presents with ulcerating plaques, tumors, or subcutaneous nodules on the skin of the extremities, however, frequent involvement of mucosal and extranodal sites (such as the nasal cavity, gastrointestinal tract or lungs) is also observed. Cases associated with panniculitis may present with hemophagocytic syndrome (abrupt onset of fever, rash, cytopenia, hepatosplenomegaly and neurological compromise). Infiltration of lymph nodes, spleen and bone marrow is uncommon and resistance to multilineage chemotherapy is reported.","definition_xrefs":["Orphanet:178533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutaneous T-cell lymphoma","termid":"MONDO:0015758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"primary cutaneous gamma/delta-positive T-cell lymphoma","secondary_identifiers":["GARD:20158","ICD10CM:C84.4"],"termid":"MONDO:0015812","xrefs":{"Monarch":{"xref_id":"0015812"}}}


id: MONDO:0011076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic skeletal muscle disease characterized by abnormal chimeric aggregates of desmin and other cytoskeletal proteins and granulofilamentous material at the ultrastructural level in muscle biopsies and variable clinical/ myopathological features, age of disease onset and rate of disease progression. Patients present with bilateral skeletal muscle weakness that starts in distal leg muscles and spreads proximally, sometimes involving trunk, neck flexors and facial muscles and often cardiomyopathy manifested by conduction blocks, arrhythmias, chronic heart failure, and sometimes tachyarrhythmia. Weakness eventually leads to wheelchair dependence. Respiratory insufficiency can be a major cause of disability and death, beginning with nocturnal hyperventilation with oxygen desaturation and progressing to daytime respiratory failure.","definition_xrefs":["Orphanet:98909"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant distal myopathy","termid":"MONDO:0016108"},{"relation_name":"excluded_subClassOf","term_name":"hereditary inclusion-body myopathy","termid":"MONDO:0016112"},{"relation_name":"excluded_subClassOf","term_name":"qualitative or quantitative defects of desmin","termid":"MONDO:0016187"},{"relation_name":"excluded_subClassOf","term_name":"familial restrictive cardiomyopathy","termid":"MONDO:0016340"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of desmin","termid":"MONDO:0016187"},{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"},{"relation_name":"is_a","term_name":"myofibrillar myopathy","termid":"MONDO:0018943"},{"relation_name":"is_a","term_name":"hereditary neuromuscular disease","termid":"MONDO:0100546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005267","MONDO:0005336"],"is_obsolete":false,"name":"myofibrillar myopathy 1","secondary_identifiers":["Orphanet:363543","GARD:16870","DOID:0110286","DOID:0080092","OMIM:601419","OMIM:615325","UMLS:C1832370","MEDGEN:330449"],"synonyms":[{"name":"CMD1F and LGMD1D","type":"related"},{"name":"CMD1F and LGMD1D, formerly","type":"related"},{"name":"DES autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"DES myofibrillar myopathy (disease)","type":"exact"},{"name":"IBM1","type":"related"},{"name":"MFM1","type":"related"},{"name":"arrhythmogenic right ventricular cardiomyopathy 7","type":"related"},{"name":"arrhythmogenic right ventricular cardiomyopathy 7, formerly","type":"related"},{"name":"arrhythmogenic right ventricular dysplasia, familial, 7","type":"related"},{"name":"arrhythmogenic right ventricular dysplasia, familial, 7, formerly","type":"related"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in DES","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy type 2R","type":"exact"},{"name":"cardiomyopathy, dilated, 1F and limb-girdle muscular dystrophy type 1D","type":"related"},{"name":"cardiomyopathy, dilated, 1F and limb-girdle muscular dystrophy type 1D, formerly","type":"related"},{"name":"cardiomyopathy, dilated, with conduction defect and muscular dystrophy","type":"related"},{"name":"desmin-related myofibrillar myopathy","type":"exact"},{"name":"desmin-related myopathy","type":"related"},{"name":"desmin-related myopathy with arrhythmogenic right ventricular cardiomyopathy","type":"related"},{"name":"desminopathy","type":"exact"},{"name":"desminopathy, primary","type":"related"},{"name":"inclusion body myopathy 1, autosomal dominant","type":"related"},{"name":"inclusion body myopathy 1, autosomal dominant, formerly","type":"related"},{"name":"myofibrillar myopathy (disease) caused by mutation in DES","type":"exact"},{"name":"myofibrillar myopathy 1","type":"exact"},{"name":"myofibrillar myopathy type 1","type":"exact"},{"name":"myofibrillar myopathy with arrhythmogenic right ventricular cardiomyopathy","type":"related"},{"name":"myopathy, myofibrillar, 1","type":"related"},{"name":"myopathy, myofibrillar, desmin-related","type":"related"},{"name":"myopathy, myofibrillar, type 1","type":"exact"}],"termid":"MONDO:0011076","xrefs":{"Monarch":{"xref_id":"0011076"}}}


id: GO:0060069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with the positioning of the mitotic spindle.","definition_xrefs":["GOC:bf","GOC:dph","PMID:11532397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"is_a","term_name":"non-canonical Wnt signaling pathway","termid":"GO:0035567"},{"relation_name":"is_a","term_name":"regulation of microtubule cytoskeleton organization","termid":"GO:0070507"},{"relation_name":"regulates","term_name":"establishment of mitotic spindle localization","termid":"GO:0040001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0007049","GO:0008150","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"Wnt signaling pathway, regulating spindle positioning","synonyms":[{"name":"Wnt receptor signaling pathway, regulating spindle positioning","type":"exact"},{"name":"Wnt receptor signalling pathway, regulating spindle positioning","type":"exact"},{"name":"Wnt-activated signaling pathway, regulating spindle positioning","type":"exact"},{"name":"non-canonical Wnt signaling pathway","type":"broad"}],"termid":"GO:0060069"}


id: GO:0031485
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing a class XV myosin heavy chain and associated light chains. Myosin XV is single headed, and has a large extension (1200aa) at the N-terminus of the motor domain, two IQ motifs and a tail with a similar domain structure to that of the tail of myosin VII.","definition_xrefs":["PMID:10722873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0015629","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"myosin XV complex","termid":"GO:0031485"}


id: FYPO:0002395
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the maintenance of localization of a protein at a location in heterochromatin at centromere outer repeat regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to heterochromatin at centromere outer repeat","termid":"FYPO:0002386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased maintenance of protein localization to heterochromatin at centromere outer repeat","synonyms":[{"name":"abnormal maintenance of protein localization to heterochromatin at centromere otr","type":"exact"},{"name":"abnormal maintenance of protein localization to heterochromatin at centromeric outer repeat region","type":"exact"},{"name":"abnormal maintenance of protein localization to heterochromatin at pericentric region","type":"related"},{"name":"abnormal maintenance of protein localization to heterochromatin at pericentromeric region","type":"related"},{"name":"decreased maintenance of protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"decreased maintenance of protein localization to centromere outer repeat heterochromatin","type":"exact"},{"name":"decreased maintenance of protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased maintenance of protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"},{"name":"reduced maintenance of protein localization to heterochromatin at centromere outer repeat","type":"exact"}],"termid":"FYPO:0002395"}


id: MONDO:0002880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A biphasic neoplasm that arises from the ovary and is characterized by the presence of mullerian-type epithelial tissue in a mesenchymal sarcomatous stroma. The presence of a high grade sarcomatous component is associated with recurrences and metastases.","definition_xrefs":["NCIT:C7317"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ovarian carcinosarcoma","termid":"MONDO:0003792"},{"relation_name":"is_a","term_name":"adenosarcoma","termid":"MONDO:0005636"},{"relation_name":"is_a","term_name":"ovarian cancer","termid":"MONDO:0008170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian adenosarcoma","secondary_identifiers":["MEDGEN:277458","UMLS:C1335169","DOID:4115"],"synonyms":[{"name":"adenosarcoma of ovary","type":"exact"},{"name":"ovarian Mullerian adenosarcoma","type":"exact"},{"name":"ovarian Müllerian adenosarcoma","type":"exact"},{"name":"ovarian adenosarcoma","type":"exact"},{"name":"ovarian mesodermal adenosarcoma","type":"exact"},{"name":"ovarian mullerian adenosarcoma","type":"exact"},{"name":"ovary adenosarcoma","type":"exact"}],"termid":"MONDO:0002880","xrefs":{"Monarch":{"xref_id":"0002880"}}}


id: MONDO:0030634
data:
  {"annotated_genes":["SJAG_01797"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87897],"is_not":false,"summary":null,"term":"MONDO:0030634"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukoencephalopathy, hereditary diffuse, with spheroids","termid":"MONDO:0030796"},{"relation_name":"is_a","term_name":"AARS1-related leukoencephalopathy","termid":"MONDO:1010132"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01797":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukoencephalopathy, hereditary diffuse, with spheroids 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1794254","OMIM:619661","UMLS:C5562044"],"synonyms":[{"name":"HDLS2","type":"exact"},{"name":"leukoencephalopathy, hereditary diffuse, with spheroids 2","type":"exact"},{"name":"leukoencephalopathy, hereditary diffuse, with spheroids, swedish IIA","type":"exact"}],"termid":"MONDO:0030634","terms_by_termid":{"MONDO:0030634":null},"xrefs":{"Monarch":{"xref_id":"0030634"}}}


id: MONDO:0000727
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87706,87707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008409"}]},"cv_name":"mondo","definition":"A muscular dystrophy which begins at the lower legs and affects the shoulder region earlier and more severely than distal arm.","definition_xrefs":["PMID:28179901","DOID:0060253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Emery-Dreifuss muscular dystrophy","termid":"MONDO:0016830"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005267"],"is_obsolete":false,"name":"scapuloperoneal myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C536624","MEDGEN:419759","UMLS:C2931268"],"synonyms":[{"name":"myopathy, scapuloperoneal","type":"related"},{"name":"scapuloperoneal syndrome, myopathic type","type":"related"}],"termid":"MONDO:0000727","terms_by_termid":{"MONDO:0008409":null},"xrefs":{"Monarch":{"xref_id":"0000727"}}}


id: PBO:0001378
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lesch-Nyhan syndrome and Kelley-Seegmiller syndrome","termid":"PBO:0001378"}


id: GO:0061936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding and fusion of a sperm, with the plasma membrane of the oocyte as part of the process of double fertilization forming a zygote and endosperm.","definition_xrefs":["PMID:21123745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"plasma membrane fusion","termid":"GO:0045026"},{"relation_name":"part_of","term_name":"double fertilization forming a zygote and endosperm","termid":"GO:0009567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"fusion of sperm to egg plasma membrane involved in double fertilization forming a zygote and endosperm","termid":"GO:0061936"}


id: GO:0000238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which follows leptotene during prophase I of meiosis, and during which each chromosome pairs with its homolog; the two become aligned and crossing over may occur.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle phase","termid":"GO:0098764"},{"relation_name":"part_of","term_name":"meiotic prophase I","termid":"GO:0007128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007128"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007128"],"is_obsolete":false,"name":"zygotene","secondary_identifiers":["Wikipedia:Meiosis#Zygotene","Wikipedia:Zygotene"],"termid":"GO:0000238"}


id: MONDO:0009524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability-spasticity-ectrodactyly syndrome is a rare intellectual disability syndrome characterized by severe intellectual disability, spastic paraplegia (with wasting of the lower limbs) and distal transverse defects of the limbs (e.g. ectrodactyly, syndactyly, clinodactyly of the hands and/or feet).","definition_xrefs":["Orphanet:1891"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"intellectual disability-spasticity-ectrodactyly syndrome","secondary_identifiers":["OMIM:246555","GARD:3523","UMLS:C1855501","MEDGEN:340888","MESH:C537446","SCTID:763743003"],"synonyms":[{"name":"Jancar syndrome","type":"exact"},{"name":"ectrodactyly, spastic paraplegia and intellectual disability","type":"related"},{"name":"ectrodactyly, spastic paraplegia and mental retardation","type":"related"},{"name":"intellectual disability spasticity ectrodactyly","type":"related"},{"name":"intellectual disability, spasticity and transverse limb defects","type":"related"},{"name":"limb defects, distal transverse, with intellectual disability and spasticity","type":"related"},{"name":"limb defects, distal transverse, with mental retardation and spasticity","type":"related"},{"name":"mental retardation spasticity ectrodactyly","type":"related"},{"name":"mental retardation, spasticity and transverse limb defects","type":"related"}],"termid":"MONDO:0009524","xrefs":{"Monarch":{"xref_id":"0009524"}}}


id: MONDO:0013569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asphyxiating thoracic dystrophy that has material basis in homozygous or compound heterozygous mutation in the WDR35 gene on chromosome 2p21.1.","definition_xrefs":["DOID:0110090","PMID:17935248","PMID:21473986"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"asphyxiating thoracic dystrophy 3","termid":"MONDO:0013127"},{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"short-rib thoracic dysplasia 7 with or without polydactyly","secondary_identifiers":["UMLS:C3279792","MEDGEN:481422","OMIM:614091","GARD:15756","Orphanet:498497"],"synonyms":[{"name":"SRPS5","type":"exact"},{"name":"SRTD7","type":"exact"},{"name":"short rib-polydactyly syndrome type 5","type":"exact"},{"name":"short rib-polydactyly syndrome type V","type":"exact"},{"name":"short rib-polydactyly syndrome, type 5","type":"exact"},{"name":"short-rib thoracic dysplasia 7 with or without polydactyly","type":"exact"}],"termid":"MONDO:0013569","xrefs":{"Monarch":{"xref_id":"0013569"}}}


id: MONDO:1011343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Perceptual disorders that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"},{"relation_name":"is_a","term_name":"psychiatric disorder, non-human animal","termid":"MONDO:1011351"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perceptual disorders, non-human animal","termid":"MONDO:1011343","xrefs":{"Monarch":{"xref_id":"1011343"}}}


id: PR:G2TRL3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsa3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRL3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.19","synonyms":[{"name":"Spom972h-rsa3","type":"exact"}],"termid":"PR:G2TRL3"}


id: MOD:01133
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-12-hydroxyfarnesyl-L-cysteine methyl ester.","definition_xrefs":["RESID:AA0103#var","PubMed:17790543","RESID:AA0105#var"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"S-12-hydroxyfarnesyl-L-cysteine","termid":"MOD:00112"},{"relation_name":"has_functional_parent","term_name":"L-cysteine methyl ester","termid":"MOD:00114"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-12-hydroxyfarnesyl-L-cysteine methyl ester","synonyms":[{"name":"S12HyFarnOMeCys","type":"exact"}],"termid":"MOD:01133"}


id: PBO:0090262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L4","termid":"PBO:0090262"}


id: PBO:0075766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/arginine repetitive matrix 5","termid":"PBO:0075766"}


id: GO:0034228
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of ethanolamine from one side of a membrane to the other. Ethanolamine (2-aminoethanol, monoethanolamine) is an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids, such as phosphatidylethanolamine.","definition_xrefs":["GOC:rn","PMID:3514579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine transmembrane transporter activity","termid":"GO:0005275"},{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ethanolamine transmembrane transporter activity","secondary_identifiers":["MetaCyc:TRANS-RXN0-476"],"synonyms":[{"name":"2-aminoethanol transmembrane transporter activity","type":"exact"},{"name":"ethanolamine permease activity","type":"exact"},{"name":"monoethanolamine transmembrane transporter activity","type":"exact"}],"termid":"GO:0034228"}


id: GO:0044154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 14 of the histone.","definition_xrefs":["GOC:jl","PMID:17194708","GOC:lb"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K14 acetylation (obsolete GO:0044154)","synonyms":[{"name":"histone H3 acetylation at K14","type":"exact"},{"name":"histone H3K14 acetylation","type":"exact"}],"termid":"GO:0044154"}


id: MONDO:0005217
data:
  {"annotated_genes":["SJAG_02229","SJAG_01665","SJAG_00993","SJAG_04621","SJAG_MIT03","SJAG_01240","SJAG_03145","SJAG_04397","SJAG_01671","SJAG_03703","SJAG_01181","SJAG_02431","SJAG_00547","SJAG_03077","SJAG_03453","SJAG_02919","SJAG_01209","SJAG_01322","SJAG_03126","SJAG_00930","SJAG_04553","SJAG_05199","SJAG_01754","SJAG_02611","SJAG_01139","SJAG_03815","SJAG_MIT13","SJAG_04567","SJAG_02342","SJAG_04231","SJAG_02131","SJAG_02785","SJAG_00228","SJAG_03824","SJAG_MIT15","SJAG_02923","SJAG_02536"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000015"},{"annotations":[87181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011451"},{"annotations":[86934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014051"},{"annotations":[86913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014667"},{"annotations":[86911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014668"},{"annotations":[86833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014112"},{"annotations":[86834,86835,86836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014113"},{"annotations":[86839,86840,86841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014114"},{"annotations":[88101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032592"},{"annotations":[88387,88386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030300"},{"annotations":[87378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859358"},{"annotations":[88201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957545"},{"annotations":[88168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030330"},{"annotations":[87519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012557"},{"annotations":[87707,87706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008409"},{"annotations":[87012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009026"},{"annotations":[88021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012808"},{"annotations":[88292,88291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013198"},{"annotations":[88893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013339"},{"annotations":[86969,86970,86971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014073"},{"annotations":[88001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013261"},{"annotations":[88002,88003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013262"},{"annotations":[87510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012556"},{"annotations":[87051,87052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009290"},{"annotations":[86991,86990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008647"},{"annotations":[88279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012112"},{"annotations":[88041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012799"},{"annotations":[88288,88289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013197"},{"annotations":[87166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010946"},{"annotations":[88284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012111"},{"annotations":[87370,87371,87372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010788"},{"annotations":[88067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009867"},{"annotations":[89118,89117,89119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[87599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[88484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[88274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"},{"annotations":[87336,87337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054588"},{"annotations":[89052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013968"},{"annotations":[87855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008685"}]},"cv_name":"mondo","definition":"An instance of cardiomyopathy that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy","termid":"MONDO:0004994"},{"relation_name":"is_a","term_name":"cardiogenetic 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cardiomyopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1018022925","ICD9:425.4","SCTID:35728003","UMLS:C0264789","MEDGEN:538845","EFO:0002945"],"synonyms":[{"name":"hereditary cardiomyopathy","type":"exact"}],"termid":"MONDO:0005217","terms_by_termid":{"MONDO:0008104":null,"MONDO:0008409":null,"MONDO:0008647":null,"MONDO:0008685":null,"MONDO:0009026":null,"MONDO:0009290":null,"MONDO:0009867":null,"MONDO:0010788":null,"MONDO:0010946":null,"MONDO:0011451":null,"MONDO:0012111":null,"MONDO:0012112":null,"MONDO:0012371":null,"MONDO:0012556":null,"MONDO:0012557":null,"MONDO:0012799":null,"MONDO:0012808":null,"MONDO:0013186":null,"MONDO:0013197":null,"MONDO:0013198":null,"MONDO:0013261":null,"MONDO:0013262":null,"MONDO:0013339":null,"MONDO:0013968":null,"MONDO:0014051":null,"MONDO:0014073":null,"MONDO:0014112":null,"MONDO:0014113":null,"MONDO:0014114":null,"MONDO:0014667":null,"MONDO:0014668":null,"MONDO:0030300":null,"MONDO:0030330":null,"MONDO:0032592":null,"MONDO:0033669":null,"MONDO:0054588":null,"MONDO:0859358":null,"MONDO:0957545":null,"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"0005217"}}}


id: GO:0021614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the glossopharyngeal nerve to attain its fully functional state. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion.","definition_xrefs":["GOC:dgh","ISBN:0838580343","GOC:jid","GO_REF:0000021","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"glossopharyngeal nerve development","termid":"GO:0021563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glossopharyngeal nerve maturation","synonyms":[{"name":"CN IX maturation","type":"related"}],"termid":"GO:0021614"}


id: GO:1900317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maltopentaose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maltopentaose transport","termid":"GO:1900315"},{"relation_name":"is_a","term_name":"positive regulation of pentasaccharide transport","termid":"GO:1900362"},{"relation_name":"positively_regulates","term_name":"maltopentaose transport","termid":"GO:2001101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of maltopentaose transport","synonyms":[{"name":"activation of maltopentaose transport","type":"narrow"},{"name":"up regulation of maltopentaose transport","type":"exact"},{"name":"up-regulation of maltopentaose transport","type":"exact"},{"name":"upregulation of maltopentaose transport","type":"exact"}],"termid":"GO:1900317"}


id: MONDO:0010228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked nonsyndromic hearing loss","termid":"MONDO:0019586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, X-linked 3","secondary_identifiers":["GARD:18095","DOID:0111736","MESH:C564727","OMIM:300030","UMLS:C3888089","MEDGEN:854758"],"synonyms":[{"name":"DFNX3","type":"narrow"},{"name":"deafness X-linked, DFN3","type":"narrow"},{"name":"deafness, X-linked 3","type":"narrow"},{"name":"deafness, X-linked 4, congenital sensorineural","type":"narrow"}],"termid":"MONDO:0010228","xrefs":{"Monarch":{"xref_id":"0010228"}}}


id: PR:A6X993
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC338.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:A6X993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C338.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.03c","synonyms":[{"name":"Spom972h-SPCC338.03c","type":"exact"}],"termid":"PR:A6X993"}


id: GO:0170057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the joining of an RNA with 3'-phosphate or 2',3'-cyclic-phosphate ends to an RNA with 5'-hydroxy ends according to either (i) a 3'-end 3'-phospho-ribonucleotide-RNA + a 5'-end dephospho-ribonucleoside-RNA + GTP = a ribonucleotidyl-ribonucleotide-RNA + diphosphate + GMP; or (ii) a 3'-end 2',3'-cyclophospho-ribonucleotide-RNA + a 5'-end dephospho-ribonucleoside-RNA + GTP + H2O = a ribonucleotidyl-ribonucleotide-RNA + diphosphate + GMP + H+.","definition_xrefs":["EC:6.5.1.8","PMID:21311021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA ligase activity","termid":"GO:0008452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"RNA ligase (GTP) activity","synonyms":[{"name":"3'-phosphate/5'-hydroxy nucleic acid ligase activity","type":"exact"}],"termid":"GO:0170057"}


id: PBO:0017434
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-starts_during","termid":"PBO:0017434"}


id: PBO:0089763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase, meiotic, STKc MAK-like Pit1","termid":"PBO:0089763"}


id: PBO:0077000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 2","termid":"PBO:0077000"}


id: MONDO:0000782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A fruit allergy triggered by Ziziphus mauritiana plant fruit food product.","definition_xrefs":["DOID:0060507"],"gene_count":0,"genotype_count":0,"name":"obsolete Indian plum allergy (obsolete MONDO:0000782)","synonyms":[{"name":"Ziziphus mauritiana fruit allergy","type":"exact"}],"termid":"MONDO:0000782","xrefs":{"Monarch":{"xref_id":"0000782"}}}


id: PBO:0080955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger BED-type containing 10, pseudogene","termid":"PBO:0080955"}


id: PBO:0063832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"putative homeodomain transcription factor 2","termid":"PBO:0063832"}


id: FYPO:0003466
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is normal (i.e. indistinguishable from wild type) when the cell is subject to a heat stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular trehalose level","termid":"FYPO:0001449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular trehalose level during cellular response to heat","synonyms":[{"name":"normal cellular trehalose accumulation during cellular response to heat","type":"related"},{"name":"normal cellular trehalose level during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal cellular trehalose level during cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0003466"}


id: GO:0001400
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region where the mating projection meets the bulk of the cell, in unicellular fungi exposed to mating pheromone.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mating projection","termid":"GO:0005937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mating projection base","synonyms":[{"name":"base of shmoo tip","type":"narrow"},{"name":"conjugation tube base","type":"narrow"}],"termid":"GO:0001400"}


id: MONDO:0001931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the tissue surrounding the biliary ducts.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholangitis","termid":"MONDO:0004789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"pericholangitis","secondary_identifiers":["UMLS:C0031052","NCIT:C34916","DOID:14272","SCTID:111373008","MEDGEN:18381"],"termid":"MONDO:0001931","xrefs":{"Monarch":{"xref_id":"0001931"}}}


id: PBO:0017999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Nop4 (predicted)","termid":"PBO:0017999"}


id: PBO:0111841
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain","termid":"PBO:0111841"}


id: GO:0090309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency, or extent of DNA methylation-dependent heterochromatin formation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of DNA methylation-dependent heterochromatin formation (obsolete GO:0090309)","synonyms":[{"name":"positive regulation of DNA methylation-dependent heterochromatin assembly","type":"exact"},{"name":"positive regulation of methylation-dependent chromatin silencing","type":"broad"}],"termid":"GO:0090309"}


id: FYECO:0000057
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The experiment was performed under conditions such that cAMP was produced endogenously.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000057 3'5'-cyclic AMP produced (obsolete FYECO:0000057)","termid":"FYECO:0000057"}


id: PBO:0090264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP for Rho1, Rga1","termid":"PBO:0090264"}


id: GO:0004593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-pantothenate + H2O = (R)-pantoate + beta-alanine.","definition_xrefs":["EC:3.5.1.22","RHEA:12448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"pantothenase activity","secondary_identifiers":["KEGG_REACTION:R02474","MetaCyc:PANTOTHENASE-RXN"],"synonyms":[{"name":"(R)-pantothenate amidohydrolase activity","type":"related"},{"name":"pantothenate amidohydrolase activity","type":"related"},{"name":"pantothenate hydrolase activity","type":"related"}],"termid":"GO:0004593"}


id: GO:0042164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the alpha subunit of interleukin-12.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-12 binding","termid":"GO:0019972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-12 alpha subunit binding","synonyms":[{"name":"CLMFp35 binding","type":"exact"},{"name":"IL-12A binding","type":"exact"},{"name":"IL-12p35 binding","type":"exact"},{"name":"NKSFp35 binding","type":"exact"}],"termid":"GO:0042164"}


id: FYPO:0000001
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00124:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00124","name":"SJAG_00124delta","uniquename":"SJAG_00124:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00370:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00370","name":"erg1delta","uniquename":"SJAG_00370:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_00993:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00993","name":"byr1delta","uniquename":"SJAG_00993:allele-1"},"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01081:allele-1":{"allele_type":"nonsense_mutation","description":"S427>stop","gene_uniquename":"SJAG_01081","name":"ade6-domE","uniquename":"SJAG_01081:allele-1"},"SJAG_01081:allele-2":{"allele_type":"amino_acid_mutation","description":"Q262A","gene_uniquename":"SJAG_01081","name":"ade6-domK","uniquename":"SJAG_01081:allele-2"},"SJAG_01081:allele-3":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01081","name":"ade6delta","uniquename":"SJAG_01081:allele-3"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 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(chk1-hyp)","reference":"PMID:20368354","type":"exact"}],"uniquename":"SJAG_01680:allele-2"},"SJAG_01718:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01718","name":"byr2delta","uniquename":"SJAG_01718:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01753:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01753","name":"mdh1delta","uniquename":"SJAG_01753:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K 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sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_02576:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02576","name":"rad25delta","uniquename":"SJAG_02576:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02594:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02594","name":"arb1delta","uniquename":"SJAG_02594:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02668:allele-1":{"allele_type":"amino_acid_mutation","description":"R77W","gene_uniquename":"SJAG_02668","name":"mpe1-R77W","uniquename":"SJAG_02668:allele-1"},"SJAG_02695:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02695","name":"tip1delta","uniquename":"SJAG_02695:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic 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id: MONDO:0012814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diastasis recti and weakness of the linea alba","secondary_identifiers":["OMIM:612198","MEDGEN:394255","UMLS:C2677303","MESH:C567402"],"synonyms":[{"name":"diastasis recti and weakness of the linea alba","type":"exact"}],"termid":"MONDO:0012814","xrefs":{"Monarch":{"xref_id":"0012814"}}}


id: PBO:0054746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2155","termid":"PBO:0054746"}


id: MOD:00528
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a carbohydrate-like group composed of Hex1HexNAc1NeuAc2 linked through a glycosidic bond.","definition_xrefs":["Unimod:160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex1HexNAc1NeuAc2 glycosylated residue","synonyms":[{"name":"Hex(1)HexNAc(1)NeuAc(2)","type":"related"},{"name":"Hex1HexNAc1NeuAc2","type":"related"}],"termid":"MOD:00528"}


id: PBO:0086658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; has some similarity to sialidase from Trypanosoma; YMR317W is not an essential gene","termid":"PBO:0086658"}


id: PR:P87048
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10943:SF1","OMA:SCHPO03448","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP19A11.03c","secondary_identifiers":["UniProtKB:P87048"],"synonyms":[{"name":"19S regulatory cap region of 26S protease subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PSMD2","type":"exact"},{"name":"proteasome non-ATPase subunit mts4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87048"}


id: MONDO:1012747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any canine hereditary ataxia that occurs in dogs due to a mutation in the RAB24 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, dog","termid":"MONDO:1012957"},{"relation_name":"is_a","term_name":"hereditary ataxia, non-human animal","termid":"MONDO:1012959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine hereditary ataxia, RAB24-related, dog","secondary_identifiers":["OMIA:001913-9615"],"synonyms":[{"name":"ataxia, cerebellar, juvenile to adolescent, RAB24-related, dog","type":"exact"},{"name":"canine hereditary ataxia","type":"related"}],"termid":"MONDO:1012747","xrefs":{"Monarch":{"xref_id":"1012747"}}}


id: MONDO:0005777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition resulting from infection by Klebsiella granulomati, which is characterized by ulcerative lesions of the genitalia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"bacterial sexually transmitted disease","termid":"MONDO:0005323"},{"relation_name":"is_a","term_name":"Klebsiella infectious disease","termid":"MONDO:0030603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granuloma inguinale","secondary_identifiers":["DOID:9113","UMLS:C0018190","MESH:D006100","ICD9:099.2","ICD10CM:A58","SCTID:28867007","EFO:0007291","MEDGEN:42291","NCIT:C3065","icd11.foundation:764124124"],"synonyms":[{"name":"donovanosis","type":"exact"},{"name":"granuloma inguinale","type":"exact"},{"name":"pudendal ulcer","type":"exact"}],"termid":"MONDO:0005777","xrefs":{"Monarch":{"xref_id":"0005777"}}}


id: PBO:0046848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 9","termid":"PBO:0046848"}


id: PBO:0085632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in G2/M phase progression and response to DNA damage; interacts with Rad53p; contains an RNA recognition motif, a nuclear localization signal, and several SQ/TQ cluster domains; hyperphosphorylated in response to DNA damage","termid":"PBO:0085632"}


id: PBO:0005215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane proteolipid Pmp31","termid":"PBO:0005215"}


id: PR:O60152
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase UBR2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03435","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase ubr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.02","secondary_identifiers":["UniProtKB:O60152"],"synonyms":[{"name":"N-end-recognizing protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"N-recognin-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-UBR2","type":"exact"}],"termid":"PR:O60152"}


id: PBO:0031132
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_cell_upon_G0_to_G1_transition","termid":"PBO:0031132"}


id: FYPO:0005464
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein is localized to one or both cell tip(s), but then remains there for a longer or shorter time than normal.","definition_xrefs":["PomBase:mah","PMID:12894167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abnormal maintenance of protein location at cell tip during vegetative growth","synonyms":[{"name":"abnormal maintenance of protein localization at cell tip during vegetative growth","type":"exact"},{"name":"abnormal maintenance of protein location at cell end during vegetative growth","type":"exact"},{"name":"abnormal maintenance of protein location at cell tip during mitotic cell cycle","type":"related"},{"name":"unstable protein localisation to cell tip during vegetative growth","type":"exact"},{"name":"unstable protein localization to cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0005464"}


id: PBO:0053665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 842","termid":"PBO:0053665"}


id: GO:0048889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuromast support cell. Support cells are non-sensory cells of the neuromast that extend between the sensory hair cells from the basement membrane to the apical surface; they are surrounded by mantle cells.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"neuromast development","termid":"GO:0048884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast support cell differentiation","termid":"GO:0048889"}


id: PBO:0071007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 9","termid":"PBO:0071007"}


id: GO:0048109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl serine cross-link through a process of forming first an intermediate cysteine sulfenic acid by peroxide oxidation, followed by condensation with the alpha-amido of the following serine residue and the release of water.","definition_xrefs":["PMID:12802339","GOC:jid","RESID:AA0344","PMID:12802338"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-amino-3-isothiazolidinone-L-serine (obsolete GO:0048109)","termid":"GO:0048109"}


id: PBO:0053635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 681","termid":"PBO:0053635"}


id: GO:0098624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylylselenate + NADPH => adenosine 3',5'-bisphosphate + selenite + NADP+ + H+.","definition_xrefs":["PMID:14723223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3'-phosphoadenylylselenate reductase activity","secondary_identifiers":["Reactome:R-HSA-2408548"],"synonyms":[{"name":"PAPSe reductase activity","type":"exact"}],"termid":"GO:0098624"}


id: PBO:0048533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEMIN7 pseudogene 1","termid":"PBO:0048533"}


id: PBO:0058318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4691","termid":"PBO:0058318"}


id: GO:1902980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any synthesis of RNA primer involved in meiotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete synthesis of RNA primer involved in premeiotic DNA replication (obsolete GO:1902980)","synonyms":[{"name":"synthesis of RNA primer involved in meiotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902980"}


id: GO:0070720
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the receptor adaptor proteins Grb2 and SHP-2, and is involved signaling via the PDGFR signaling pathway.","definition_xrefs":["GOC:mah","PMID:8943348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"Grb2-SHP-2 complex","synonyms":[{"name":"GRB2-SHP-2 complex, PDGF stimulated","type":"narrow"}],"termid":"GO:0070720"}


id: PBO:0084775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial outer membrane protein of unknown function; major constituent of the outer membrane, extending into the intermembrane space; interacts with porin (Por1p) and with Om14p; imported via the presequence pathway involving the TOM and TIM23 complexes, then assembled in the outer membrane by Mim1p; protein abundance increases in response to DNA replication stress","termid":"PBO:0084775"}


id: GO:0097492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemotaxis process that directs the migration of a sympathetic neuron axon growth cone to a specific target site in response to a combination of attractive and repulsive cues.","definition_xrefs":["PMID:22790009","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sympathetic neuron axon guidance","synonyms":[{"name":"sympathetic neuron axon chemotaxis","type":"related"},{"name":"sympathetic neuron axon growth cone guidance","type":"narrow"},{"name":"sympathetic neuron axon pathfinding","type":"exact"}],"termid":"GO:0097492"}


id: PBO:0070571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 37","termid":"PBO:0070571"}


id: GO:0140056
data:
  {"annotated_genes":["SJAG_04417","SJAG_04978","SJAG_01437","SJAG_02587","SJAG_04413","SJAG_02699","SJAG_01564","SJAG_01324","SJAG_01116","SJAG_05184","SJAG_03848","SJAG_00280","SJAG_01929","SJAG_04023","SJAG_00029","SJAG_00380","SJAG_03347","SJAG_04966","SJAG_03710","SJAG_02320","SJAG_03552","SJAG_03499","SJAG_02626","SJAG_00171","SJAG_03005","SJAG_01305","SJAG_01168","SJAG_01697","SJAG_04221","SJAG_03170","SJAG_01633","SJAG_04370","SJAG_03416","SJAG_03536","SJAG_00053","SJAG_01772","SJAG_01598"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016240"},{"annotations":[60916,73620,120180,62865,62234,92280,113649,99368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061817"},{"annotations":[72205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048211"},{"annotations":[81856,118621,71696,76533,71740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990456"},{"annotations":[82059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071562"},{"annotations":[108983,117204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"},{"annotations":[96206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140057"},{"annotations":[79621,103051,111630,111786,77939,102239,73729,114678,101433,119564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048278"},{"annotations":[60675,71539,94213,120236,81588,81850,92450,76884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006904"}]},"cv_name":"biological_process","definition":"The process by which an organelle membrane interacts with another membrane via molecular tethers that physically bridge the two membranes and attach them to each other.","definition_xrefs":["PMID:27875684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane docking","termid":"GO:0022406"},{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00053":null,"SJAG_00171":null,"SJAG_00280":null,"SJAG_00380":null,"SJAG_01116":null,"SJAG_01168":null,"SJAG_01305":null,"SJAG_01324":null,"SJAG_01437":null,"SJAG_01564":null,"SJAG_01598":null,"SJAG_01633":null,"SJAG_01697":null,"SJAG_01772":null,"SJAG_01929":null,"SJAG_02320":null,"SJAG_02587":null,"SJAG_02626":null,"SJAG_02699":null,"SJAG_03005":null,"SJAG_03170":null,"SJAG_03347":null,"SJAG_03416":null,"SJAG_03499":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03710":null,"SJAG_03848":null,"SJAG_04023":null,"SJAG_04221":null,"SJAG_04370":null,"SJAG_04413":null,"SJAG_04417":null,"SJAG_04966":null,"SJAG_04978":null,"SJAG_05184":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"organelle localization by membrane tethering","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0140056","terms_by_termid":{"GO:0006904":null,"GO:0016240":null,"GO:0048211":null,"GO:0048278":null,"GO:0061817":null,"GO:0071562":null,"GO:0140057":null,"GO:1990456":null,"GO:1990854":null}}


id: FYPO:0001651
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of lysine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import","termid":"FYPO:0001057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal lysine import","synonyms":[{"name":"abnormal L-lysine import","type":"exact"},{"name":"abnormal L-lysine import across plasma membrane","type":"exact"},{"name":"abnormal lysine import into cell","type":"exact"},{"name":"abnormal lysine uptake","type":"exact"}],"termid":"FYPO:0001651"}


id: PR:O14193
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug69 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 69 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56E4.05","synonyms":[{"name":"Spom972h-mug69","type":"exact"}],"termid":"PR:O14193"}


id: MONDO:0016323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary pulmonary alveolar proteinosis","termid":"MONDO:0012580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic respiratory distress with surfactant metabolism deficiency","secondary_identifiers":["Orphanet:217566","MEDGEN:1679491","UMLS:C5190853","GARD:17127"],"termid":"MONDO:0016323","xrefs":{"Monarch":{"xref_id":"0016323"}}}


id: PBO:0086774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the cell periphery and vacuole; YCL048W-A has a paralog, YDR524C-B, that arose from the whole genome duplication","termid":"PBO:0086774"}


id: MONDO:0009916
data:
  {"annotated_genes":["SJAG_00630"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88783],"is_not":false,"summary":null,"term":"MONDO:0009916"}]},"cv_name":"mondo","definition":"Decreased activity of the steroidogenic enzyme, 17-beta-hydroxysteroid dehydrogenase, associated with mutation(s) in the HSD17B3 gene, leading to reduced testosterone production.","definition_xrefs":["NCIT:C120203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00630":null},"genotype_count":0,"is_obsolete":false,"name":"46,XY disorder of sex development due to 17-beta-hydroxysteroid dehydrogenase 3 deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:264300","MEDGEN:120626","GARD:5659","MESH:C564868","DOID:0112248","icd11.foundation:887793448","Orphanet:752","UMLS:C0268296","NANDO:2200390","MESH:C537805","SCTID:50658006"],"synonyms":[{"name":"17 Beta HSD3 deficiency","type":"exact"},{"name":"17 alpha KSR deficiency","type":"related"},{"name":"17 alpha ketosteroid reductase deficiency of testis","type":"related"},{"name":"17 beta HSD3 deficiency","type":"exact"},{"name":"17 beta hydroxysteroid dehydrogenase III deficiency","type":"related"},{"name":"17-BETA hydroxysteroid dehydrogenase III deficiency","type":"related"},{"name":"17-Beta hydroxysteroid dehydrogenase 3 deficiency","type":"related"},{"name":"17-KSR deficiency","type":"related"},{"name":"17-beta hydroxysteroid dehydrogenase 3 deficiency","type":"related"},{"name":"17-beta-hydroxysteroid dehydrogenase 3 deficiency","type":"exact"},{"name":"17-ketoreductase deficiency","type":"exact"},{"name":"17-ketosteroid reductase deficiency of testis","type":"related"},{"name":"17-ketosteroidreductase deficiency","type":"exact"},{"name":"46,XY disorder of sex development due to 17-beta-hydroxysteroid dehydrogenase 3 deficiency","type":"exact"},{"name":"Male pseudoherma-phroditism with gynecomastia","type":"related"},{"name":"Male pseudohermaphroditism due to 17-beta-hydroxysteroid dehydrogenase 3 deficiency","type":"exact"},{"name":"neutral 17 beta hydroxysteroid oxidoreductase deficiency","type":"related"},{"name":"neutral 17-Beta-hydroxysteroid oxidoreductase deficiency","type":"related"},{"name":"polycystic ovarian disease due to 17-ketosteroid reductase deficiency","type":"related"},{"name":"polycystic ovary syndrome due to 17-ketosteroid reductase deficiency","type":"related"},{"name":"pseudohermaphroditism, Male, with gynecomastia","type":"related"}],"termid":"MONDO:0009916","terms_by_termid":{"MONDO:0009916":null},"xrefs":{"Monarch":{"xref_id":"0009916"}}}


id: MONDO:1010789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stiff skin syndrome that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stiff skin syndrome, non-human animal","termid":"MONDO:1010147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stiff skin syndrome, dog","secondary_identifiers":["OMIA:002018-9615"],"termid":"MONDO:1010789","xrefs":{"Monarch":{"xref_id":"1010789"}}}


id: GO:0042685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a cardioblast cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell fate specification","termid":"GO:0060912"},{"relation_name":"part_of","term_name":"cardioblast cell fate commitment","termid":"GO:0042684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardioblast cell fate specification","termid":"GO:0042685"}


id: MONDO:0859210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal disorder","termid":"MONDO:0019040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16q12 duplication syndrome","secondary_identifiers":["OMIM:619649","UMLS:C5562082","MEDGEN:1794292"],"termid":"MONDO:0859210","xrefs":{"Monarch":{"xref_id":"0859210"}}}


id: PBO:0031231
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_deacetylation","termid":"PBO:0031231"}


id: SO:0001471
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match against an RST sequence.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"expressed_sequence_match","termid":"SO:0000102"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RST_match","synonyms":[{"name":"RST match","type":"exact"}],"termid":"SO:0001471"}


id: PBO:0110261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex RNA-binding subunit Pcf11","termid":"PBO:0110261"}


id: PBO:0045131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 1","termid":"PBO:0045131"}


id: PBO:0075293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 32","termid":"PBO:0075293"}


id: GO:0034578
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: limonene + H2O = alpha-terpineol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete limonene 8-hydratase activity (obsolete GO:0034578)","termid":"GO:0034578"}


id: PBO:0088507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose phosphate 3-epimerase Rpe1","termid":"PBO:0088507"}


id: GO:0070623
data:
  {"annotated_genes":["SJAG_03538","SJAG_02406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90906,115677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of thiamine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vitamin metabolic process","termid":"GO:0030656"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"thiamine biosynthetic process","termid":"GO:0009228"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02406":null,"SJAG_03538":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"regulation of thiamine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of thiamin biosynthetic process","type":"exact"},{"name":"regulation of thiamine anabolism","type":"exact"},{"name":"regulation of thiamine biosynthesis","type":"exact"},{"name":"regulation of thiamine formation","type":"exact"},{"name":"regulation of thiamine synthesis","type":"exact"}],"termid":"GO:0070623","terms_by_termid":{"GO:0090180":null}}


id: PBO:0054134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1500","termid":"PBO:0054134"}


id: MONDO:0018608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pure autonomic failure (PAF) is a neurodegenerative disease that affects the sympathetic branch of the autonomous nervous system and that manifests with orthostatic hypotension.","definition_xrefs":["Orphanet:441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system disorder","termid":"MONDO:0001292"},{"relation_name":"is_a","term_name":"multiple system atrophy","termid":"MONDO:0007803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066","MONDO:0005559"],"is_obsolete":false,"name":"pure autonomic failure","secondary_identifiers":["MESH:D054970","UMLS:C0393911","NORD:1948","GARD:10428","icd11.foundation:734022291","MEDGEN:98293","SCTID:84438001"],"synonyms":[{"name":"Bradbury Eggleston syndrome","type":"exact"},{"name":"Bradbury-Eggleston syndrome","type":"exact"},{"name":"PAF","type":"exact"},{"name":"Pure dysautonomia","type":"exact"},{"name":"Pure idiopatic dysautonomia","type":"exact"},{"name":"idiopathic orthostatic hypotension","type":"exact"},{"name":"idiopathic orthostatic hypotension (a symptom)","type":"related"},{"name":"orthostatic hypotension (a symptom)","type":"related"}],"termid":"MONDO:0018608","xrefs":{"Monarch":{"xref_id":"0018608"}}}


id: PBO:0034080
data:
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id: MONDO:0011696
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id: PBO:0065687
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pituitary tumor-transforming 3, pseudogene","termid":"PBO:0065687"}


id: PBO:0036402
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id: GO:0042331
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id: PBO:0003966
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id: MONDO:0013626
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id: GO:0009560
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id: GO:0007062
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id: GO:0048583
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id: PBO:0051904
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 11","termid":"PBO:0051904"}


id: PBO:0068002
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 304","termid":"PBO:0068002"}


id: PBO:0070443
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 like","termid":"PBO:0070443"}


id: FYPO:0003580
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Sad1 accumulates is greater than normal during a cellular response to DNA damage.","definition_xrefs":["PMID:24943839","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased number of Sad1 foci during response to DNA damage","synonyms":[{"name":"increased number of Sad1 foci during DNA damage response","type":"exact"},{"name":"increased number of Sad1 foci during response to DNA damage during mitotic cell cycle","type":"related"},{"name":"increased number of Sad1 foci during response to DNA damage during vegetative growth","type":"exact"}],"termid":"FYPO:0003580"}


id: MONDO:0044113
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A manifestation of systemic lupus erythematosus with a widespread vesiculobullous eruption.","definition_xrefs":["NCIT:C117104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous lupus erythematosus","termid":"MONDO:0005282"},{"relation_name":"is_a","term_name":"systemic lupus erythematosus","termid":"MONDO:0007915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"bullous systemic lupus erythematosus","secondary_identifiers":["SCTID:239889005","UMLS:C0409977","MEDGEN:592738","Orphanet:46489"],"synonyms":[{"name":"BSLE","type":"exact"},{"name":"bullous systemic lupus erythematosus","type":"exact"}],"termid":"MONDO:0044113","xrefs":{"Monarch":{"xref_id":"0044113"}}}


id: FYPO:0007502
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is decreased during prophase of the first meiotic nuclear division.","definition_xrefs":["PMID:16111942","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to meiotic spindle pole body during meiosis I","termid":"FYPO:0007482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000631","FYPO:0005447","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to meiotic spindle pole body during prophase I","synonyms":[{"name":"decreased protein localisation to meiotic spindle pole body during prophase I","type":"exact"},{"name":"decreased protein localization to meiotic SPB during prophase I","type":"exact"},{"name":"decreased protein localization to meiotic spindle pole body during meiotic prophase I","type":"exact"},{"name":"decreased protein localization to meiotic spindle pole body during prophase of first meiotic nuclear division","type":"exact"},{"name":"decreased protein localization to spindle pole body during prophase I","type":"exact"},{"name":"reduced protein localization to meiotic spindle pole body during prophase I","type":"exact"}],"termid":"FYPO:0007502"}


id: MOD:00784
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to N-acetyl-L-phenylalanine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-phenylalanine","synonyms":[{"name":"AcPhe","type":"exact"}],"termid":"MOD:00784"}


id: GO:0070768
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptotagmin, synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 1a, syntaxin1b, and Unc13b (or orthologs thereof).","definition_xrefs":["PMID:8999968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"synaptotagmin-synaptobrevin 2-SNAP-25-syntaxin-1a-syntaxin-1b-Unc13 complex","synonyms":[{"name":"SNARE complex (Snap25, Syt1, Unc13b, Vamp2, Stx1b2, Stx1a)","type":"narrow"},{"name":"Snap25-Syt1-Unc13b-Vamp2-Stx1b2-Stx1a complex","type":"narrow"}],"termid":"GO:0070768"}


id: MONDO:0005877
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nocardiosis (obsolete MONDO:0005877)","termid":"MONDO:0005877","xrefs":{"Monarch":{"xref_id":"0005877"}}}


id: GO:0009132
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id: PBO:0068694
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 75, pseudogene","termid":"PBO:0068694"}


id: GO:0010546
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of the Hsp90 molecular chaperone.","definition_xrefs":["PMID:11146632","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete Hsp90 protein inhibitor activity (obsolete GO:0010546)","synonyms":[{"name":"Hsp90 protein inhibitor activity","type":"exact"}],"termid":"GO:0010546"}


id: GO:0046647
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of gamma-delta T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell proliferation","termid":"GO:0042130"},{"relation_name":"is_a","term_name":"negative regulation of gamma-delta T cell activation","termid":"GO:0046644"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell proliferation","termid":"GO:0046646"},{"relation_name":"negatively_regulates","term_name":"gamma-delta T cell proliferation","termid":"GO:0046630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of gamma-delta T cell proliferation","synonyms":[{"name":"down regulation of gamma-delta T cell proliferation","type":"exact"},{"name":"down-regulation of gamma-delta T cell proliferation","type":"exact"},{"name":"downregulation of gamma-delta T cell proliferation","type":"exact"},{"name":"inhibition of gamma-delta T cell proliferation","type":"narrow"},{"name":"negative regulation of gamma-delta T lymphocyte proliferation","type":"exact"},{"name":"negative regulation of gamma-delta T-cell proliferation","type":"exact"},{"name":"negative regulation of gamma-delta T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046647"}


id: MONDO:0024357
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central sleep apnea syndrome","termid":"MONDO:0004731"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drug induced central sleep apnea","secondary_identifiers":["MEDGEN:783188","SCTID:104831000119109","UMLS:C3662033"],"synonyms":[{"name":"drug induced central sleep apnea","type":"exact"}],"termid":"MONDO:0024357","xrefs":{"Monarch":{"xref_id":"0024357"}}}


id: GO:0000108
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A stable complex of proteins that carry out the DNA damage recognition and incision reactions characteristic of nucleotide excision repair (NER), such as DNA damage recognition, DNA helix unwinding, and endonucleolytic cleavage at sites flanking damaged DNA; includes TFIIH subunits and additional polypeptides; may form in the absence of DNA damage.","definition_xrefs":["PMID:9852079","PMID:10681587"],"gene_count":0,"genotype_count":0,"name":"obsolete repairosome (obsolete GO:0000108)","synonyms":[{"name":"repairosome","type":"exact"}],"termid":"GO:0000108"}


id: PBO:0038809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 15","termid":"PBO:0038809"}


id: PBO:0066973
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 276","termid":"PBO:0066973"}


id: PBO:0044964
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 9","termid":"PBO:0044964"}


id: PBO:0062776
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 56 subfamily A member 4","termid":"PBO:0062776"}


id: MONDO:0013445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any classic complement early component deficiency in which the cause of the disease is a mutation in the C9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic complement early component deficiency","termid":"MONDO:0000015"},{"relation_name":"is_a","term_name":"immunodeficiency due to a late component of complement deficiency","termid":"MONDO:0015700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"complement component 9 deficiency","secondary_identifiers":["OMIM:613825","MEDGEN:462539","MESH:C565165","UMLS:C3151189","NANDO:2200787","DOID:0060303","GARD:18292"],"synonyms":[{"name":"C9 classic complement early component deficiency","type":"exact"},{"name":"C9 deficiency","type":"related"},{"name":"C9D","type":"related"},{"name":"classic complement early component deficiency caused by mutation in C9","type":"exact"},{"name":"complement component 9 deficiency","type":"exact"}],"termid":"MONDO:0013445","xrefs":{"Monarch":{"xref_id":"0013445"}}}


id: GO:0016243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of the autophagosome.","definition_xrefs":["GOC:autophagy","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"},{"relation_name":"is_a","term_name":"autophagosome organization","termid":"GO:1905037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"regulation of autophagosome size","synonyms":[{"name":"regulation of autophagic vacuole size","type":"exact"}],"termid":"GO:0016243"}


id: PBO:0070179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 94 pseudogene","termid":"PBO:0070179"}


id: PBO:0089466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane sensing transcription coactivator, ankyrin repeat containing Mga2","termid":"PBO:0089466"}


id: GO:0060558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency or extent of calcidiol 1-monooxygenase activity. Calcidiol 1-monooxygenase activity is catalysis of the reaction: calcidiol + NADPH + H+ + O2 = calcitriol + NADP+ + H2O.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of calcidiol 1-monooxygenase activity (obsolete GO:0060558)","termid":"GO:0060558"}


id: PBO:0028462
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_lemon-shaped_cell","termid":"PBO:0028462"}


id: GO:0017110
data:
  {"annotated_genes":["SJAG_03676","SJAG_01595","SJAG_03362"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044715"},{"annotations":[115956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043262"},{"annotations":[115960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036384"},{"annotations":[72266,78220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004382"},{"annotations":[72271,78224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045134"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleoside monophosphate + phosphate.","definition_xrefs":["EC:3.6.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01595":null,"SJAG_03362":null,"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nucleoside diphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-8851396","Reactome:R-HSA-8850854","Reactome:R-HSA-8851129","Reactome:R-HSA-8851225","Reactome:R-HSA-8851356","Reactome:R-HSA-8851550","RHEA:36799","MetaCyc:NUCLEOSIDE-DIPHOSPHATASE-RXN"],"synonyms":[{"name":"NDPase activity","type":"related"},{"name":"apyrase activity","type":"broad"},{"name":"inosine 5'-diphosphatase","type":"narrow"},{"name":"inosine diphosphatase","type":"narrow"},{"name":"nucleoside 5'-diphosphatase activity","type":"related"},{"name":"nucleoside diphosphatase activity","type":"exact"},{"name":"nucleoside diphosphate phosphohydrolase activity","type":"related"},{"name":"nucleoside-diphosphatase activity","type":"exact"},{"name":"nucleoside-diphosphate phosphohydrolase activity","type":"related"},{"name":"type B nucleoside diphosphatase","type":"narrow"},{"name":"type L nucleoside diphosphatase","type":"narrow"}],"termid":"GO:0017110","terms_by_termid":{"GO:0004382":null,"GO:0036384":null,"GO:0043262":null,"GO:0044715":null,"GO:0045134":null}}


id: MONDO:0007673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucoglycinuria","secondary_identifiers":["UMLS:C0268536","icd11.foundation:2034546543","MESH:C562670","MEDGEN:78686","OMIM:138070"],"synonyms":[{"name":"Glucoglycinuria","type":"exact"}],"termid":"MONDO:0007673","xrefs":{"Monarch":{"xref_id":"0007673"}}}


id: GO:0031073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + H+ NADPH + O2 = 26-hydroxycholesterol + H2O + NADP+.","definition_xrefs":["RHEA:43836","PMID:950499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cholesterol 26-hydroxylase activity","termid":"GO:0031073"}


id: PR:O94455
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1687.14c gene.","definition_xrefs":["UniProtKB:O94455","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized calcium-binding protein C1687.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.14c","synonyms":[{"name":"Spom972h-SPAC1687.14c","type":"exact"}],"termid":"PR:O94455"}


id: GO:0097448
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A configuration of neuron spines found on ciliary ganglion neurons in the embryonic and adult brain consisting of patches of closely spaced spines lying flat against the soma.","definition_xrefs":["PMID:10818137","NIF_Subcellular:sao2128156969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spine mat","termid":"GO:0097448"}


id: FYPO:0007470
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects histone modification during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone modification","termid":"FYPO:0006458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"abnormal histone modification during G0","synonyms":[{"name":"abnormal histone modification during cell quiescence","type":"exact"},{"name":"abnormal histone modification during quiescence","type":"exact"}],"termid":"FYPO:0007470"}


id: MONDO:0013299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 6","termid":"MONDO:0016905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6q11-q14 deletion syndrome","secondary_identifiers":["UMLS:C3150790","DOID:0060423","MEDGEN:462140","OMIM:613544"],"synonyms":[{"name":"chromosome 6Q13-q14 deletion syndrome","type":"related"},{"name":"chromosome 6q11-q14 deletion syndrome","type":"exact"},{"name":"chromosome 6q11-q14 deletion syndrome, isolated cases","type":"exact"}],"termid":"MONDO:0013299","xrefs":{"Monarch":{"xref_id":"0013299"}}}


id: PBO:0031415
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle","termid":"PBO:0031415"}


id: FYPO:0005279
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more glucose-repressed mRNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Glucose-repressed mRNAs are transcribed from genes whose transcription is negatively regulated when glucose is present.","definition_xrefs":["PMID:18430926","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased level of glucose-repressed gene mRNA during vegetative growth","secondary_identifiers":["FYPO:0005287"],"synonyms":[{"name":"increased glucose starvation gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased glucose-repressed gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of cellular response to glucose starvation gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of glucose depletion gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of glucose deprivation gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of glucose starvation gene RNA during vegetative growth","type":"exact"},{"name":"increased level of glucose starvation gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of glucose starvation gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of glucose starvation gene transcripts during vegetative growth","type":"exact"},{"name":"increased level of glucose-repressed gene RNA during vegetative growth","type":"exact"},{"name":"increased level of glucose-repressed gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of glucose-repressed gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0005279"}


id: GO:0010137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ureide, the organic form of nitrogen in nitrogen fixing and transporting plants, from IMP, which is synthesized de novo during nitrogen fixation by roots.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ureide metabolic process","termid":"GO:0010135"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureide biosynthetic process","synonyms":[{"name":"ureide anabolism","type":"exact"},{"name":"ureide biosynthesis","type":"exact"},{"name":"ureide formation","type":"exact"},{"name":"ureide synthesis","type":"exact"}],"termid":"GO:0010137"}


id: PBO:0052734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 26","termid":"PBO:0052734"}


id: MONDO:0004616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A painful blister of the periungual skin that is caused by herpes simplex virus type 1 or 2.","definition_xrefs":["NCIT:C128402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"herpes simplex infectious disease","termid":"MONDO:0004609"},{"relation_name":"is_a","term_name":"paronychia","termid":"MONDO:0005898"},{"relation_name":"is_a","term_name":"skin disorder caused by infection","termid":"MONDO:0024294"},{"relation_name":"is_a","term_name":"nail infection","termid":"MONDO:0024487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"herpetic whitlow","secondary_identifiers":["MEDGEN:509122","DOID:8607","ICD9:054.6","SCTID:43891009","UMLS:C0153042"],"synonyms":[{"name":"Simplexvirus caused paronychia (disease)","type":"exact"},{"name":"Simplexvirus paronychia (disease)","type":"exact"},{"name":"herpetic felon","type":"exact"}],"termid":"MONDO:0004616","xrefs":{"Monarch":{"xref_id":"0004616"}}}


id: PBO:0074086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 3","termid":"PBO:0074086"}


id: PBO:0110462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACO2 pseudogene 1","termid":"PBO:0110462"}


id: MONDO:0014958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndromic neurodevelopmental disorder characterized by delayed psychomotor development, intellectual disability, truncal hypotonia, spasticity, and peripheral neuropathy.","definition_xrefs":["OMIM:617183"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete unspecified inborn mitochondrial disorder (obsolete MONDO:0016803)","termid":"MONDO:0016803"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic hereditary optic neuropathy (obsolete MONDO:0018609)","termid":"MONDO:0018609"},{"relation_name":"excluded_subClassOf","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Harel-Yoon syndrome","secondary_identifiers":["GARD:17915","MEDGEN:934644","DOID:0081395","Orphanet:496790","UMLS:C4310677"],"synonyms":[{"name":"HAYOS","type":"exact"},{"name":"Harel-Yoon syndrome","type":"exact"},{"name":"Harel-Yoon syndrome; HAYOS","type":"exact"},{"name":"optic atrophy-peripheral neuropathy-developmental delay syndrome","type":"exact"}],"termid":"MONDO:0014958","xrefs":{"Monarch":{"xref_id":"0014958"}}}


id: MONDO:0012606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mycobacterium tuberculosis, susceptibility","termid":"MONDO:0000070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mycobacterium tuberculosis, susceptibility to, 2","secondary_identifiers":["UMLS:C1970235","OMIM:611046","MEDGEN:369686"],"synonyms":[{"name":"MTBS2","type":"related"},{"name":"Mycobacterium tuberculosis, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0012606","xrefs":{"Monarch":{"xref_id":"0012606"}}}


id: PBO:0070201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 126 pseudogene","termid":"PBO:0070201"}


id: MONDO:0006865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infectious process affecting the gums. It is characterized by the development of necrotic, ulcerated, and painful lesions with creation of pseudomembranes extending along the gingival margins.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gingivitis","termid":"MONDO:0002508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrotizing ulcerative gingivitis","secondary_identifiers":["UMLS:C0017575","ICD9:101","NCIT:C34637","MEDGEN:42219","EFO:1001058","DOID:13924","MESH:D005892","SCTID:186963008"],"synonyms":[{"name":"ANUG","type":"exact"},{"name":"Fusospirillary gingivitis","type":"related"},{"name":"Fusospirillosis","type":"related"},{"name":"Vincent angina","type":"exact"},{"name":"Vincent's angina","type":"exact"},{"name":"Vincent's angina - pharyngitis","type":"exact"},{"name":"Vincent's disease","type":"exact"},{"name":"Vincent's gingivitis","type":"related"},{"name":"Vincent's infection","type":"related"},{"name":"Vincent's infection, any site","type":"exact"},{"name":"Vincent's stomatitis","type":"related"},{"name":"acute membranous gingivitis","type":"related"},{"name":"acute necrotising ulcerative gingivitis","type":"exact"},{"name":"acute necrotising ulcerative gingivitis [ambiguous]","type":"exact"},{"name":"acute necrotising ulcerative gingivostomatitis","type":"exact"},{"name":"acute necrotising ulcerative gingivostomatitis [ambiguous]","type":"exact"},{"name":"acute necrotizing ulcerative gingivitis","type":"exact"},{"name":"acute necrotizing ulcerative gingivostomatitis","type":"exact"},{"name":"acute ulceromembranous gingivitis","type":"exact"},{"name":"angina - Vincents","type":"exact"},{"name":"early acute necrotising gingivitis","type":"exact"},{"name":"phagedenic gingivitis","type":"related"},{"name":"trench mouth","type":"exact"}],"termid":"MONDO:0006865","xrefs":{"Monarch":{"xref_id":"0006865"}}}


id: PBO:0058246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4534","termid":"PBO:0058246"}


id: PBO:0005333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triosephosphate isomerase","termid":"PBO:0005333"}


id: GO:0061076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of neural retina development, the progression of the neural retina over time from its initial formation to the mature structure. The neural retina is the part of the retina that contains neurons and photoreceptor cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neural retina development","termid":"GO:0061074"},{"relation_name":"is_a","term_name":"negative regulation of retina development in camera-type eye","termid":"GO:1902867"},{"relation_name":"negatively_regulates","term_name":"neural retina development","termid":"GO:0003407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neural retina development","termid":"GO:0061076"}


id: PBO:0072545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 75","termid":"PBO:0072545"}


id: PBO:0017762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Rcf1","termid":"PBO:0017762"}


id: PBO:0116271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evolutionarily-conserved 5'-3' exonuclease; deNADing enzyme that modulates mitochondrial NAD-capped RNA; component of cytoplasmic P-bodies involved in mRNA decay; positively regulates transcription initiation and elongation; involved in microtubule-mediated processes, filamentous growth, rRNA maturation, telomere maintenance, tRNA intron turnover; negative regulator of autophagy; activated by glycolytic flux and scavenger decapping enzyme Dcs1p; role in preventing L-A mycovirus pathogenesis","termid":"PBO:0116271"}


id: MONDO:0001705
data:
  {"annotated_genes":["SJAG_04478","SJAG_03762","SJAG_00465","SJAG_04066","SJAG_00749","SJAG_01568","SJAG_01588","SJAG_02335","SJAG_02280","SJAG_01366","SJAG_02904","SJAG_00921","SJAG_03919","SJAG_04695","SJAG_04414","SJAG_01512","SJAG_01621","SJAG_04168","SJAG_02749","SJAG_03335","SJAG_00166","SJAG_02894","SJAG_02046","SJAG_02358","SJAG_04204","SJAG_04746","SJAG_02340","SJAG_02597","SJAG_02802","SJAG_02585","SJAG_00468","SJAG_01296","SJAG_03254"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87342,87343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007110"},{"annotations":[88123,88122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013217"},{"annotations":[89042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013964"},{"annotations":[87640,87639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014245"},{"annotations":[88222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014394"},{"annotations":[87152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010493"},{"annotations":[88252,88251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011639"},{"annotations":[88656,88655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044309"},{"annotations":[88659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044310"},{"annotations":[87881,87880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032668"},{"annotations":[87882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032669"},{"annotations":[87885,87884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032670"},{"annotations":[87594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031071"},{"annotations":[87674,87675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012529"},{"annotations":[88591,88592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012924"},{"annotations":[88589,88590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012925"},{"annotations":[88610,88609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012937"},{"annotations":[88608,88607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012938"},{"annotations":[88611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012939"},{"annotations":[88125,88124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013216"}]},"cv_name":"mondo","definition":"A disease characterized by normocytic, normochromic anemia, low hematocrit, reticulocytopenia, and selective erythroid hypoplasia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"idiopathic aplastic anemia","termid":"MONDO:0012197"},{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00166":null,"SJAG_00465":null,"SJAG_00468":null,"SJAG_00749":null,"SJAG_00921":null,"SJAG_01296":null,"SJAG_01366":null,"SJAG_01512":null,"SJAG_01568":null,"SJAG_01588":null,"SJAG_01621":null,"SJAG_02046":null,"SJAG_02280":null,"SJAG_02335":null,"SJAG_02340":null,"SJAG_02358":null,"SJAG_02585":null,"SJAG_02597":null,"SJAG_02749":null,"SJAG_02802":null,"SJAG_02894":null,"SJAG_02904":null,"SJAG_03254":null,"SJAG_03335":null,"SJAG_03762":null,"SJAG_03919":null,"SJAG_04066":null,"SJAG_04168":null,"SJAG_04204":null,"SJAG_04414":null,"SJAG_04478":null,"SJAG_04695":null,"SJAG_04746":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"pure red-cell aplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:1340","GARD:7504","NORD:1636","SCTID:50715003","MEDGEN:11154","NCIT:C34974","NANDO:2100177","UMLS:C0034902","ICD9:284.81","MESH:D012010"],"synonyms":[{"name":"PRCA","type":"exact"},{"name":"Pure Red Cell Aplasia, Acquired","type":"exact"},{"name":"primary red cell aplasia","type":"exact"},{"name":"pure red cell aplasia","type":"exact"},{"name":"red cell hypoplasia","type":"exact"}],"termid":"MONDO:0001705","terms_by_termid":{"MONDO:0007110":null,"MONDO:0010493":null,"MONDO:0011639":null,"MONDO:0012529":null,"MONDO:0012924":null,"MONDO:0012925":null,"MONDO:0012937":null,"MONDO:0012938":null,"MONDO:0012939":null,"MONDO:0013216":null,"MONDO:0013217":null,"MONDO:0013964":null,"MONDO:0014245":null,"MONDO:0014394":null,"MONDO:0031071":null,"MONDO:0032668":null,"MONDO:0032669":null,"MONDO:0032670":null,"MONDO:0044309":null,"MONDO:0044310":null},"xrefs":{"Monarch":{"xref_id":"0001705"}}}


id: PBO:0069319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 577, pseudogene","termid":"PBO:0069319"}


id: PBO:0067582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 740, pseudogene","termid":"PBO:0067582"}


id: MONDO:0012377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"Asperger syndrome","termid":"MONDO:0005259"},{"relation_name":"is_a","term_name":"Asperger syndrome, susceptibility to","termid":"MONDO:0100440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asperger syndrome, susceptibility to, 4","secondary_identifiers":["MEDGEN:400650","UMLS:C1864961","OMIM:609954"],"synonyms":[{"name":"ASPERGER syndrome, susceptibility to, 4","type":"related"},{"name":"ASPG4","type":"exact"},{"name":"Asperger syndrome susceptibility 4","type":"exact"}],"termid":"MONDO:0012377","xrefs":{"Monarch":{"xref_id":"0012377"}}}


id: MONDO:0014308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A temporal lobe epilepsy that has material basis in variation in the chromosome region 3q25-q26.","definition_xrefs":["DOID:0060749","PMID:24021842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporal lobe epilepsy","termid":"MONDO:0005115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"familial temporal lobe epilepsy 6","secondary_identifiers":["UMLS:C3810320","GARD:18281","MEDGEN:816650","OMIM:615697"],"synonyms":[{"name":"ETL6","type":"exact"},{"name":"epilepsy, familial temporal lobe, 6","type":"related"},{"name":"familial temporal lobe epilepsy type 6","type":"exact"}],"termid":"MONDO:0014308","xrefs":{"Monarch":{"xref_id":"0014308"}}}


id: MONDO:0004080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma of the larynx that arises from the glottic area. It may remain localized for a long period then in late disease stage, it may spread to the opposite true vocal cord, supraglottic and subglottic areas, and the soft tissues of the neck. Hoarseness is the presenting symptom.","definition_xrefs":["NCIT:C8186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glottis carcinoma","termid":"MONDO:0002355"},{"relation_name":"is_a","term_name":"laryngeal squamous cell carcinoma","termid":"MONDO:0005595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"glottis squamous cell carcinoma","secondary_identifiers":["DOID:7031","UMLS:C0280325","MEDGEN:76096"],"synonyms":[{"name":"epidermoid carcinoma of glottis","type":"exact"},{"name":"epidermoid carcinoma of the glottis","type":"exact"},{"name":"glottic epidermoid carcinoma","type":"exact"},{"name":"glottic squamous cell carcinoma","type":"exact"},{"name":"glottis epidermoid carcinoma","type":"exact"},{"name":"glottis squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of glottis","type":"exact"},{"name":"squamous cell carcinoma of the glottis","type":"exact"}],"termid":"MONDO:0004080","xrefs":{"Monarch":{"xref_id":"0004080"}}}


id: PBO:0086062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that associates with translating ribosomes; interacts with GTPase Rbg1p","termid":"PBO:0086062"}


id: MONDO:0008515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare congenital distal limb malformation characterized by complete bilateral syndactyly (involving all digits 1 to 5).","definition_xrefs":["Orphanet:93405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic syndactyly","termid":"MONDO:0019530"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndactyly type 4","secondary_identifiers":["SCTID:719158007","MEDGEN:350013","MESH:C566092","UMLS:C1861355","DOID:0111818","GARD:4434","OMIM:186200","icd11.foundation:75755208"],"synonyms":[{"name":"Haas type syndactyly","type":"related"},{"name":"LMBR1 non-syndromic syndactyly","type":"exact"},{"name":"SDTY4","type":"related"},{"name":"Sd4","type":"related"},{"name":"non-syndromic syndactyly caused by mutation in LMBR1","type":"exact"},{"name":"polysyndactyly type Haas","type":"related"},{"name":"polysyndactyly, Haas type","type":"exact"},{"name":"syndactyly, type 4","type":"related"},{"name":"syndactyly, type IV","type":"related"}],"termid":"MONDO:0008515","xrefs":{"Monarch":{"xref_id":"0008515"}}}


id: PBO:0079383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 1 class VI pseudogene 1","termid":"PBO:0079383"}


id: PBO:0043074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 3 subunit","termid":"PBO:0043074"}


id: PBO:0059544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Leu (UUA/G) 1","termid":"PBO:0059544"}


id: PBO:0066705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 2","termid":"PBO:0066705"}


id: PBO:0064707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 43","termid":"PBO:0064707"}


id: GO:0050423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thiamine + 2 O2 = thiamine acetic acid + 2 H2O2.","definition_xrefs":["EC:1.1.3.23","MetaCyc:THIAMIN-OXIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"thiamine oxidase activity","secondary_identifiers":["RHEA:21280"],"synonyms":[{"name":"thiamin dehydrogenase activity","type":"related"},{"name":"thiamin oxidase activity","type":"exact"},{"name":"thiamin:oxygen 5-oxidoreductase activity","type":"related"},{"name":"thiamine dehydrogenase activity","type":"related"},{"name":"thiamine:oxygen 5-oxidoreductase activity","type":"related"}],"termid":"GO:0050423"}


id: MOD:01292
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00075. Map to MOD:00075.","definition_xrefs":["Unimod:529"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01292 dimethylation of proline residue (obsolete MOD:01292)","synonyms":[{"name":"Delta:H(5)C(2)","type":"related"},{"name":"Dimethylation of proline residue","type":"related"}],"termid":"MOD:01292"}


id: FYPO:0002545
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues three positions C-terminal to arginine residues (i.e. in Arg-X-X-Ser, or RxxS, sequences) does not occur during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein serine phosphorylation at RxxS site during cellular response to hydroxyurea (obsolete FYPO:0002545)","synonyms":[{"name":"abolished protein serine phosphorylation at Arg-X-X-Ser site during cellular response to hydroxyurea","type":"exact"},{"name":"abolished protein serine phosphorylation at PAS site during cellular response to hydroxyurea","type":"exact"},{"name":"abolished protein serine phosphorylation at RxxS site during cellular response to HU","type":"exact"},{"name":"abolished protein serine phosphorylation at RxxS site during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"abolished protein serine phosphorylation at RxxS site during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"abolished protein serine phosphorylation at arginine-X-X-serine site during cellular response to hydroxyurea","type":"exact"},{"name":"abolished protein serine phosphorylation at phospho-Akt site during cellular response to hydroxyurea","type":"exact"},{"name":"protein serine phosphorylation abolished at RxxS site during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0002545"}


id: PBO:0001171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Isoleucine","termid":"PBO:0001171"}


id: GO:0045099
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A type of intermediate filament.","definition_xrefs":["ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete vimentin (obsolete GO:0045099)","synonyms":[{"name":"vimentin","type":"exact"}],"termid":"GO:0045099"}


id: PR:Q9URY5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A flavohemoprotein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavohemoprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.02c","secondary_identifiers":["UniProtKB:Q9URY5"],"synonyms":[{"name":"Flavohemoglobin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NO oxygenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NOD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hmp","type":"exact"},{"name":"hemoglobin-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nitric oxide dioxygenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URY5"}


id: PBO:0016937
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Insulinase Related Protease","termid":"PBO:0016937"}


id: PBO:0089937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain protein Wwm1","termid":"PBO:0089937"}


id: PBO:0012225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin L family cyclin","termid":"PBO:0012225"}


id: GO:0010796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the volume of a multivesicular body, a type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles.","definition_xrefs":["GOC:tb","GOC:dph","GOC:jp"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of multivesicular body size (obsolete GO:0010796)","termid":"GO:0010796"}


id: MONDO:0014505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the GRIN2B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"infantile spasms","termid":"MONDO:0018097"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 27","secondary_identifiers":["UMLS:C4015316","DOID:0080444","GARD:16063","MEDGEN:863753","OMIM:616139"],"synonyms":[{"name":"DEE27","type":"exact"},{"name":"EIEE27","type":"exact"},{"name":"GRIN2B early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 27","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in GRIN2B","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 27","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 27","type":"exact"}],"termid":"MONDO:0014505","xrefs":{"Monarch":{"xref_id":"0014505"}}}


id: PBO:0047078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 133 member G, pseudogene","termid":"PBO:0047078"}


id: PBO:0031190
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delaminated_cell_wall_during_vegetative_growth","termid":"PBO:0031190"}


id: GO:0032620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of any member of the interleukin-17 family of cytokines due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","Wikipedia:Interleukin_17","GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-17 production","secondary_identifiers":["GO:0072615","GO:0042235"],"synonyms":[{"name":"CTLA-8 production","type":"exact"},{"name":"Cytotoxic T-lymphocyte-associated antigen 8 production","type":"exact"},{"name":"IL-17 production","type":"exact"},{"name":"interleukin-17 biosynthetic process","type":"narrow"},{"name":"interleukin-17 secretion","type":"narrow"}],"termid":"GO:0032620"}


id: PBO:0034343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-starts_with","termid":"PBO:0034343"}


id: PR:P40370
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eno101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 1-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1815.01","synonyms":[{"name":"2-phospho-D-glycerate hydro-lyase 1-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"2-phosphoglycerate dehydratase 1-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-eno101","type":"exact"}],"termid":"PR:P40370"}


id: PBO:0088400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOR signalling network scaffold, leucine-rich repeat protein Sog2","termid":"PBO:0088400"}


id: PBO:0079331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 17C","termid":"PBO:0079331"}


id: PBO:0044712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11","termid":"PBO:0044712"}


id: PBO:0081756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 687","termid":"PBO:0081756"}


id: GO:0046510
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-sulfoquinovose + 1,2-diacylglycerol = sulfoquinovosyldiacylglycerol + UDP.","definition_xrefs":["MetaCyc:RXN-1224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity","secondary_identifiers":["RHEA:49468"],"synonyms":[{"name":"UDP-sulphoquinovose:DAG sulphoquinovosyltransferase activity","type":"exact"},{"name":"sulfolipid synthase","type":"broad"}],"termid":"GO:0046510"}


id: MONDO:0016864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Duane-radial ray syndrome","termid":"MONDO:0011812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0000426"],"is_obsolete":false,"name":"Okihiro syndrome due to a point mutation","secondary_identifiers":["MEDGEN:1842838","Orphanet:261647","UMLS:C5679683","GARD:20788"],"synonyms":[{"name":"Duane-radial ray syndrome due to a point mutation","type":"exact"}],"termid":"MONDO:0016864","xrefs":{"Monarch":{"xref_id":"0016864"}}}


id: GO:0046079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dUMP, deoxyuridine (5'-)monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate catabolic process","termid":"GO:0009178"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide catabolic process","termid":"GO:0009223"},{"relation_name":"is_a","term_name":"dUMP metabolic process","termid":"GO:0046078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dUMP catabolic process","synonyms":[{"name":"dUMP breakdown","type":"exact"},{"name":"dUMP catabolism","type":"exact"},{"name":"dUMP degradation","type":"exact"}],"termid":"GO:0046079"}


id: MONDO:0002363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign epithelial neoplasm that projects above the surrounding epithelial surface and consists of villous or arborescent outgrowths of fibrovascular stroma.","definition_xrefs":["NCIT:C7440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary epithelial neoplasm","termid":"MONDO:0021096"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papilloma","secondary_identifiers":["SCTID:711329002","DOID:2615","MEDGEN:10566","NCIT:C3713","ICDO:8050/0","MESH:D010212","UMLS:C0030354"],"synonyms":[{"name":"papilloma","type":"exact"},{"name":"papilloma (except papilloma of bladder M-81201) (morphologic abnormality)","type":"exact"},{"name":"papilloma, benign","type":"exact"},{"name":"papillomatosis NOS (morphologic abnormality)","type":"related"}],"termid":"MONDO:0002363","xrefs":{"Monarch":{"xref_id":"0002363"}}}


id: MONDO:0015912
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88186,88187],"is_not":false,"summary":null,"term":"MONDO:0015912"}]},"cv_name":"mondo","definition":"An inherited giant platelet disorder with a complex phenotype characterized by congenital thrombocytopenia and possible subsequent manifestations of sensorineural hearing loss, presenile cataracts, elevation of liver enzymes, and/or progressive nephropathy often leading to end-stage renal disease (ESRD). Epstein syndrome, Fechtner syndrome, May-Hegglin anomaly and Sebastian syndrome, previously described as distinct disorders, represent some of the different clinical presentations of MYH9-RD.","definition_xrefs":["Orphanet:182050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"syndromic constitutional thrombocytopenia","termid":"MONDO:0018795"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"macrothrombocytopenia and granulocyte inclusions with or without nephritis or sensorineural hearing loss","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060651","SCTID:234484005","SCTID:712922002","Orphanet:1984","SCTID:234485006","OMIM:605249","GARD:180","NCIT:C158788","SCTID:236422008","OMIM:600208","OMIM:155100","ICD9:759.89","ICD9:582.89","UMLS:C5200934","MESH:C537831","OMIM:153640","EFO:0009646","ICD9:287.33","Orphanet:807","NCIT:C131646","Orphanet:1019","Orphanet:850","MEDGEN:1704278"],"synonyms":[{"name":"Alport syndrome with macrothrombocytopenia","type":"related"},{"name":"Alport syndrome with macrothrombocytopenia, formerly","type":"related"},{"name":"Brodie Chole griffin syndrome","type":"related"},{"name":"Brodie Chole gryphon syndrome","type":"related"},{"name":"Dohle leukocyte inclusions with giant platelets","type":"related"},{"name":"Epstein syndrome","type":"exact"},{"name":"FTNS","type":"related"},{"name":"Fechtner syndrome","type":"exact"},{"name":"MHA","type":"related"},{"name":"MYH-9 related disease","type":"exact"},{"name":"MYH9 related disorders","type":"related"},{"name":"MYH9 related thrombocytopenia","type":"related"},{"name":"MYH9-RD","type":"exact"},{"name":"MYH9-related disease","type":"exact"},{"name":"MYH9-related disorder","type":"exact"},{"name":"MYH9-related syndrome","type":"exact"},{"name":"MYH9-related syndromic thrombocytopenia","type":"exact"},{"name":"May-Hegglin anomaly","type":"exact"},{"name":"May-Hegglin thrombocytopenia","type":"related"},{"name":"SBS","type":"related"},{"name":"Sebastian platelet syndrome","type":"exact"},{"name":"Sebastian syndrome","type":"exact"},{"name":"bleeding disorder, Platelet-type, 6","type":"related"},{"name":"giant platelet syndrome with thrombocytopenia","type":"exact"},{"name":"macrothrombocytopenia and granulocyte inclusions with or without nephritis or sensorineural hearing loss","type":"exact"},{"name":"macrothrombocytopenia and progressive sensorineural deafness","type":"exact"},{"name":"macrothrombocytopenia progressive deafness","type":"related"},{"name":"macrothrombocytopenia with dispersed leukocytic inclusions","type":"related"},{"name":"macrothrombocytopenia with leukocyte inclusions","type":"related"},{"name":"macrothrombocytopenia, nephritis, and deafness","type":"related"},{"name":"macrothrombocytopenia, nephritis, deafness, and leukocyte inclusions","type":"related"},{"name":"matins","type":"related"}],"termid":"MONDO:0015912","terms_by_termid":{"MONDO:0015912":null},"xrefs":{"Monarch":{"xref_id":"0015912"}}}


id: MONDO:0003814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gastric diffuse adenocarcinoma (obsolete MONDO:0003814)","termid":"MONDO:0003814","xrefs":{"Monarch":{"xref_id":"0003814"}}}


id: MONDO:0032662
data:
  {"annotated_genes":["SJAG_03147"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88098],"is_not":false,"summary":null,"term":"MONDO:0032662"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03147":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 67","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4749019","DOID:0081228","MEDGEN:1648350","OMIM:618295"],"synonyms":[{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER, AUTOSOMAL RECESSIVE 67","type":"related"},{"name":"MRT67","type":"related"},{"name":"Mental Retardation, Autosomal Recessive 67","type":"related"}],"termid":"MONDO:0032662","terms_by_termid":{"MONDO:0032662":null},"xrefs":{"Monarch":{"xref_id":"0032662"}}}


id: MONDO:1010972
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dysautonomia that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysautonomia, non-human animal","termid":"MONDO:1010229"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysautonomia, rabbit","secondary_identifiers":["OMIA:000312-9986"],"termid":"MONDO:1010972","xrefs":{"Monarch":{"xref_id":"1010972"}}}


id: GO:0042475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a dentin-containing tooth over time, from its formation to the mature structure. A dentin-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and is composed mainly of dentin, a dense calcified substance, covered by a layer of enamel.","definition_xrefs":["GOC:cjm","GOC:mtg_sensu","GOC:mah","PMID:10333884","PMID:15355794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odontogenesis","termid":"GO:0042476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"odontogenesis of dentin-containing tooth","synonyms":[{"name":"odontogenesis of dentine-containing teeth","type":"exact"},{"name":"odontogenesis of dentine-containing tooth","type":"exact"},{"name":"odontogeny","type":"broad"},{"name":"odontosis","type":"broad"},{"name":"tooth development","type":"broad"}],"termid":"GO:0042475"}


id: GO:0006172
data:
  {"annotated_genes":["SJAG_02038"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73658],"is_not":false,"summary":null,"term":"GO:0006172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ADP, adenosine 5'-diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate biosynthetic process","termid":"GO:0009180"},{"relation_name":"is_a","term_name":"ADP metabolic process","termid":"GO:0046031"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ADP biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"ADP anabolism","type":"exact"},{"name":"ADP biosynthesis","type":"exact"},{"name":"ADP formation","type":"exact"},{"name":"ADP synthesis","type":"exact"}],"termid":"GO:0006172","terms_by_termid":{"GO:0006172":null}}


id: GO:0052721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of apurinic/apyrimidinic (AP) endodeoxyribonuclease activity, the hydrolysis of ester linkages immediately 5' to an AP (also called abasic) site within a deoxyribonucleic acid molecule by creating internal breaks, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.","definition_xrefs":["PMID:19401441"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of apurinic/apyrimidinic endodeoxyribonuclease activity (obsolete GO:0052721)","synonyms":[{"name":"regulation of AP endodeoxyribonuclease activity","type":"exact"},{"name":"regulation of abasic endodeoxyribonuclease activity","type":"exact"},{"name":"regulation of apurinic endodeoxyribonuclease activity","type":"narrow"},{"name":"regulation of apyrimidinic endodeoxyribonuclease activity","type":"narrow"}],"termid":"GO:0052721"}


id: PBO:0082608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Co-chaperone that binds Hsp82p and activates its ATPase activity; plays a role in determining prion variants; similar to Hch1p; expression is regulated by stresses such as heat shock; protein abundance increases in response to DNA replication stress","termid":"PBO:0082608"}


id: MONDO:0011641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baculum, congenital absence of","secondary_identifiers":["OMIM:606174","UMLS:C1853565","MEDGEN:344078"],"synonyms":[{"name":"Os penis, congenital absence of","type":"related"},{"name":"baculum, congenital absence of","type":"exact"}],"termid":"MONDO:0011641","xrefs":{"Monarch":{"xref_id":"0011641"}}}


id: PBO:0079831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uromodulin","termid":"PBO:0079831"}


id: PBO:0059867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 4","termid":"PBO:0059867"}


id: GO:0071984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results an organism remaining in reproductive diapause. Reproductive diapause is a form of diapause where the organism itself will remain fully active, including feeding and other routine activities, but the reproductive organs experience a tissue-specific reduction in metabolism, with characteristic triggering and releasing stimuli.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of diapause","termid":"GO:0071982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of reproductive diapause","termid":"GO:0071984"}


id: MONDO:0006342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovarian squamous cell carcinoma (obsolete MONDO:0006342)","termid":"MONDO:0006342","xrefs":{"Monarch":{"xref_id":"0006342"}}}


id: MONDO:0019273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete porokeratosis (obsolete MONDO:0019273)","termid":"MONDO:0019273","xrefs":{"Monarch":{"xref_id":"0019273"}}}


id: PBO:0088922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase Pgm1","termid":"PBO:0088922"}


id: PBO:0034469
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_DNA_damage_checkpoint_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0034469"}


id: PBO:0071274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL24 pseudogene 8","termid":"PBO:0071274"}


id: GO:0120559
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-acyl-sn-glycero-3-phosphoethanolamine + H2O = sn-glycero-3-phosphoethanolamine + a fatty acid + H+.","definition_xrefs":["RHEA:32967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysophospholipase activity","termid":"GO:0120558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"phosphatidylethanolamine lysophospholipase activity","termid":"GO:0120559"}


id: PBO:0081828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 761","termid":"PBO:0081828"}


id: MONDO:0030891
data:
  {"annotated_genes":["SJAG_01400"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88785],"is_not":false,"summary":null,"term":"MONDO:0030891"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal dominant 66","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5677000","MEDGEN:1812470","OMIM:619910"],"synonyms":[{"name":"MRD66","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 66","type":"exact"},{"name":"mental retardation, autosomal dominant 66","type":"exact"}],"termid":"MONDO:0030891","terms_by_termid":{"MONDO:0030891":null},"xrefs":{"Monarch":{"xref_id":"0030891"}}}


id: GO:1900988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ajmaline.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid indole alkaloid biosynthetic process","termid":"GO:0009709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"ajmaline biosynthetic process","secondary_identifiers":["GO:1900986"],"synonyms":[{"name":"ajmaline anabolism","type":"exact"},{"name":"ajmaline biosynthesis","type":"exact"},{"name":"ajmaline formation","type":"exact"},{"name":"ajmaline metabolic process","type":"broad"},{"name":"ajmaline metabolism","type":"broad"},{"name":"ajmaline synthesis","type":"exact"}],"termid":"GO:1900988"}


id: PBO:0072813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 9","termid":"PBO:0072813"}


id: PBO:0079229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 6","termid":"PBO:0079229"}


id: PBO:0091624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHE domain cation binding protein","termid":"PBO:0091624"}


id: GO:0008816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S)-citryl-CoA = acetyl-CoA + oxaloacetate.","definition_xrefs":["EC:4.1.3.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"citryl-CoA lyase activity","secondary_identifiers":["MetaCyc:CITRYLY-RXN","RHEA:20812"],"synonyms":[{"name":"(3S)-citryl-CoA oxaloacetate-lyase (acetyl-CoA-forming)","type":"related"},{"name":"(3S)-citryl-CoA oxaloacetate-lyase activity","type":"related"}],"termid":"GO:0008816"}


id: PBO:0063195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 14","termid":"PBO:0063195"}


id: FYPO:0002860
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of polynucleotide uridylyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah","PMID:17449726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal poly(U) polymerase activity","synonyms":[{"name":"abnormal RNA uridylyltransferase activity","type":"exact"},{"name":"abnormal polynucleotide uridylyltransferase activity","type":"exact"}],"termid":"FYPO:0002860"}


id: PBO:0046253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator acetyltransferase complex subunit 2","termid":"PBO:0046253"}


id: PBO:0048936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gon-4 like","termid":"PBO:0048936"}


id: GO:0097605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the nuclear envelope.","definition_xrefs":["GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of nuclear envelope permeability (obsolete GO:0097605)","synonyms":[{"name":"regulation of nuclear membrane permeability","type":"related"}],"termid":"GO:0097605"}


id: GO:0035243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the addition of a second methyl group to methylated peptidyl-arginine. Methylation is on the terminal nitrogen (omega nitrogen) residue that is not already methylated, resulting in symmetrical peptidyl-N(omega),N'(omega)-dimethyled arginine residues.","definition_xrefs":["EC:2.1.1.320","PMID:14705965","RESID:AA0067","RESID:AA0069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine N-methyltransferase activity","termid":"GO:0016274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740","GO:0008276","GO:0140096"],"is_obsolete":false,"name":"protein-arginine omega-N symmetric methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-6804383","RHEA:48108"],"synonyms":[{"name":"S-adenosyl-L-methionine:[protein]-L-arginine N-methyltransferase ([protein]-Nomega,Nomega'-dimethyl-L-arginine-forming)","type":"related"},{"name":"protein arginine omega-N symmetric methylase activity","type":"exact"},{"name":"protein arginine omega-N symmetric methyltransferase activity","type":"exact"},{"name":"type II PRMT activity","type":"related"},{"name":"type II protein arginine methyltransferase activity","type":"related"}],"termid":"GO:0035243"}


id: PBO:0045270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 17","termid":"PBO:0045270"}


id: GO:0036401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a pyrokinin and transmitting the signal within the cell to induce a change in cell activity. Pyrokinins are a group of insect neuropeptides that share the common C-terminal pentapeptide sequence Phe-X-Pro-Arg-Leu-NH2 (X = S, T, K, A, or G). They play a central role in diverse physiological processes including stimulation of gut motility, production and release of sex pheromones, diapause, and pupariation.","definition_xrefs":["PMID:12951076","PMID:19186060","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"pyrokinin receptor activity","synonyms":[{"name":"PK receptor activity","type":"exact"}],"termid":"GO:0036401"}


id: FYPO:0003967
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is lover than normal when the population in which the cell is found is in stationary phase. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level","termid":"FYPO:0000835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level in stationary phase","synonyms":[{"name":"decreased protein accumulation in stationary phase","type":"related"},{"name":"reduced protein level in stationary phase","type":"exact"}],"termid":"FYPO:0003967"}


id: MONDO:0013499
data:
  {"annotated_genes":["SJAG_05180"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88579],"is_not":false,"summary":null,"term":"MONDO:0013499"}]},"cv_name":"mondo","definition":"Any Fanconi anemia in which the cause of the disease is a mutation in the SLX4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05180":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005570","MONDO:0021190","MONDO:0005046","MONDO:0002280"],"is_obsolete":false,"name":"Fanconi anemia complementation group P","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15731","DOID:0111092","MEDGEN:854020","UMLS:C3469542","OMIM:613951"],"synonyms":[{"name":"FANCP","type":"exact"},{"name":"Fanconi Anemia, complementation group type P","type":"exact"},{"name":"Fanconi anaemia caused by mutation in SLX4","type":"exact"},{"name":"Fanconi anaemia caused by mutation in Slx4","type":"exact"},{"name":"Fanconi anaemia complementation group type P","type":"exact"},{"name":"Fanconi anemia caused by mutation in SLX4","type":"exact"},{"name":"Fanconi anemia caused by mutation in Slx4","type":"exact"},{"name":"Fanconi anemia complementation group type P","type":"exact"},{"name":"Fanconi anemia, complementation group P","type":"related"},{"name":"SLX4 Fanconi anaemia","type":"exact"},{"name":"SLX4 Fanconi anemia","type":"exact"},{"name":"Slx4 Fanconi anaemia","type":"exact"},{"name":"Slx4 Fanconi anemia","type":"exact"}],"termid":"MONDO:0013499","terms_by_termid":{"MONDO:0013499":null},"xrefs":{"Monarch":{"xref_id":"0013499"}}}


id: PBO:0114463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase sequence feature types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"go_cam_pathway","termid":"PBO:0114463"}


id: GO:0000968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNA exon ligation process that rejoins two exons of a pre-tRNA which has had the intron removed.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA exon ligation","termid":"GO:0000378"},{"relation_name":"part_of","term_name":"tRNA splicing, via endonucleolytic cleavage and ligation","termid":"GO:0006388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"tRNA exon ligation","termid":"GO:0000968"}


id: GO:0000174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Downregulation of MAP kinase activity in the context of transduction of mating pheromone signal, as described for Saccharomyces.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPK (mating sensu Saccharomyces) (obsolete GO:0000174)","synonyms":[{"name":"inactivation of MAPK (mating sensu Saccharomyces)","type":"exact"}],"termid":"GO:0000174"}


id: PBO:0030774
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_hydrogen_peroxide","termid":"PBO:0030774"}


id: MONDO:0014716
data:
  {"annotated_genes":["SJAG_03067","SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87835,87836],"is_not":false,"summary":null,"term":"MONDO:0014716"}]},"cv_name":"mondo","definition":"A rare multiple congenital anomalies/dysmorphic syndrome with intellectual disability, characterized by macrocephaly, intellectual disability, seizures, dysmorphic facial features (including tall forehead, downslanting palpebral fissures, hypertelorism, depressed nasal bridge, and macrostomia), megalencephaly, and small thorax. Other reported features are umbilical hernia, muscular hypotonia, global developmental delay, autistic behavior, and café-au-lait spots, among others.","definition_xrefs":["Orphanet:457485"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"overgrowth syndrome and/or cerebral malformations due to abnormalities in MTOR pathway genes","termid":"MONDO:0100283"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02723":null,"SJAG_03067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0002320"],"is_obsolete":false,"name":"macrocephaly-intellectual disability-neurodevelopmental disorder-small thorax syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:13636","OMIM:616638","NORD:91167","MEDGEN:899689","UMLS:C4225259"],"synonyms":[{"name":"MINDS syndrome","type":"exact"},{"name":"SKS","type":"related"},{"name":"SMITH-Kingsmore syndrome","type":"related"},{"name":"Smith-Kingsmore Syndrome","type":"exact"},{"name":"Smith-Kingsmore syndrome","type":"exact"},{"name":"macrocephaly, seizures, intellectual disability, umbilical hernia, and Facial Dysmorphism","type":"related"},{"name":"macrocephaly, seizures, mental retardation, umbilical hernia, and Facial Dysmorphism","type":"related"}],"termid":"MONDO:0014716","terms_by_termid":{"MONDO:0014716":null},"xrefs":{"Monarch":{"xref_id":"0014716"}}}


id: GO:0100004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates peroxisome organization.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of peroxisome organization by transcription from RNA polymerase II promoter (obsolete GO:0100004)","termid":"GO:0100004"}


id: GO:0047656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha,alpha-trehalose + phosphate = D-glucose + beta-D-glucose 1-phosphate.","definition_xrefs":["EC:2.4.1.64","MetaCyc:ALPHAALPHA-TREHALOSE-PHOSPHORYLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,4-alpha-oligoglucan phosphorylase activity","termid":"GO:0004645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"alpha,alpha-trehalose phosphorylase activity","secondary_identifiers":["RHEA:23512"],"synonyms":[{"name":"a,a-trehalose phosphorylase activity","type":"exact"},{"name":"alpha,alpha-trehalose:phosphate beta-D-glucosyltransferase activity","type":"related"},{"name":"trehalose phosphorylase","type":"broad"}],"termid":"GO:0047656"}


id: GO:0048102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A form of programmed cell death that is accompanied by the formation of autophagosomes. Autophagic cell death is characterized by lack of chromatin condensation and massive vacuolization of the cytoplasm, with little or no uptake by phagocytic cells.","definition_xrefs":["PMID:23347517","GOC:mah","GOC:autophagy","GOC:mtg_apoptosis","PMID:18846107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"autophagic cell death","synonyms":[{"name":"autophagic death","type":"broad"},{"name":"autosis","type":"related"},{"name":"programmed cell death by autophagy","type":"broad"},{"name":"programmed cell death by macroautophagy","type":"exact"},{"name":"type II programmed cell death","type":"related"}],"termid":"GO:0048102"}


id: PBO:0001447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin family protein","termid":"PBO:0001447"}


id: FYPO:0001017
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal NETO","termid":"FYPO:0000147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005568"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0005568","FYPO:0001320"],"is_obsolete":false,"name":"premature NETO","synonyms":[{"name":"advanced NETO","type":"exact"},{"name":"early NETO","type":"exact"},{"name":"premature NETO during mitotic cell cycle","type":"related"},{"name":"premature NETO during vegetative growth","type":"exact"},{"name":"premature activation of bipolar cell growth","type":"related"},{"name":"premature cell growth mode switching, monopolar to bipolar","type":"exact"},{"name":"premature new end take-off","type":"exact"},{"name":"premature switch from monopolar to bipolar cell growth","type":"exact"}],"termid":"FYPO:0001017"}


id: MOD:01042
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a adamantyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adamantyl modified residue","synonyms":[{"name":"Ada","type":"exact"}],"termid":"MOD:01042"}


id: GO:0034322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: decanoyl-CoA + an alcohol = CoA + a decyl ester.","definition_xrefs":["GOC:mah","PMID:16361250"],"gene_count":0,"genotype_count":0,"name":"obsolete alcohol O-decanoyltransferase activity (obsolete GO:0034322)","termid":"GO:0034322"}


id: PBO:0117150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UNKL antisense RNA 1","termid":"PBO:0117150"}


id: MONDO:0012786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Juvenile cataract - microcornea - renal glucosuria is an extremely rare autosomal dominant association reported in a single Swiss family and characterized clinically by juvenile cataract associated with bilateral microcornea, and renal glucosuria without other renal tubular defects.","definition_xrefs":["Orphanet:247794"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0000426"],"is_obsolete":false,"name":"juvenile cataract-microcornea-renal glucosuria syndrome","secondary_identifiers":["DOID:0070353","MEDGEN:934773","MESH:C567434","GARD:17196","OMIM:612018","SCTID:722457005","UMLS:C4310806"],"synonyms":[{"name":"CJMG","type":"related"},{"name":"CTRCT47","type":"related"},{"name":"cataract 47","type":"related"},{"name":"cataract 47, juvenile, with microcornea","type":"exact"},{"name":"cataract, juvenile, with microcornea","type":"related"},{"name":"cataract, juvenile, with microcornea and glucosuria","type":"related"},{"name":"cataract, juvenile, with microcornea and glucosuria, formerly","type":"related"},{"name":"juvenile cataract-microcornea-renal glucosuria syndrome","type":"exact"}],"termid":"MONDO:0012786","xrefs":{"Monarch":{"xref_id":"0012786"}}}


